Virus Inactivation

病毒灭活
  • 文章类型: Journal Article
    最近的COVID-19大流行引起了人们对有效空气消毒解决方案的兴趣。杀菌紫外线(GUV)辐射的应用是防止COVID-19空气传播以及其他现有和未来传染性空气传播疾病的绝佳竞争者。虽然GUV已被证明可有效灭活SARS-CoV-2,但有关紫外线敏感性和剂量要求的定量数据,需要预测和优化GUV解决方案的性能,仍然有限。在这项研究中,研究了雾化SARS-CoV-2对254nm紫外线(UV)辐射的紫外线敏感性。这是通过在配备有上层UV-C照明器的测试室中采用基于3D计算流体动力学的SARS-CoV-2灭活模拟并将结果与在同一测试室中执行的先前发布的测量进行比较来完成的。在这项研究中发现的紫外线敏感性为(0.6±0.2)m2/J,这相当于在3和6J/m2之间的D90剂量。这些值与基于文献中报道的其他电晕病毒和灭活数据的先前估计在相同的范围内。
    The recent COVID-19 pandemic has raised interest in efficient air disinfection solutions. The application of germicidal ultraviolet (GUV) irradiation is an excellent contender to prevent airborne transmission of COVID-19, as well as other existing and future infectious airborne diseases. While GUV has already been proven effective in inactivating SARS-CoV-2, quantitative data on UV susceptibility and dose requirements, needed to predict and optimize the performance of GUV solutions, is still limited. In this study, the UV susceptibility of aerosolized SARS-CoV-2 to 254 nm ultraviolet (UV) irradiation is investigated. This is done by employing 3D computational fluid dynamics based simulations of SARS-CoV-2 inactivation in a test chamber equipped with an upper-room UV-C luminaire and comparing the results to previously published measurements performed in the same test chamber. The UV susceptibility found in this study is (0.6 ± 0.2) m2/J, which is equivalent to a D90 dose between 3 and 6 J/m2. These values are in the same range as previous estimations based on other corona viruses and inactivation data reported in literature.
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  • 文章类型: Journal Article
    人类诺如病毒(HuNoV)是一种肠道感染性病原体,属于卡利病毒科,偶尔会引起流行病。容易通过食源性途径传播的循环酒精耐受性病毒颗粒显著导致HuNoV诱导的胃肠炎的全球负担。此外,与环境中其他微生物分泌的酶接触会影响病毒的感染性。因此,了解杯状病毒科的循环动力学对于减轻流行病至关重要。因此,在这项研究中,我们筛选了环境是否丰富的分泌酶成分,特别是蛋白酶,影响杯状病毒科的感染性。结果表明,将芽孢杆菌的丝氨酸蛋白酶与链霉菌产生的ε-聚-L-赖氨酸(EPL)结合起来,包括针对疫情的HuNoVGII.4_Sydney_2012菌株。体外和体内生化和病毒学分析表明,EPL具有两种独特的协同病毒灭活功能。首先,其维持最佳pH以促进蛋白酶敏感结构的病毒表面构象变化。随后,其通过在VP1衣壳中的P2和S结构域处的部分蛋白酶消化来抑制病毒RNA基因组释放。这项研究提供了有关细菌和Caliciviridae之间的高维环境相互作用的新见解,同时促进以蛋白酶为基础的抗病毒消毒剂的发展。
    Human norovirus (HuNoV) is an enteric infectious pathogen belonging to the Caliciviridae family that causes occasional epidemics. Circulating alcohol-tolerant viral particles that are readily transmitted via food-borne routes significantly contribute to the global burden of HuNoV-induced gastroenteritis. Moreover, contact with enzymes secreted by other microorganisms in the environment can impact the infectivity of viruses. Hence, understanding the circulation dynamics of Caliciviridae is critical to mitigating epidemics. Accordingly, in this study, we screened whether environmentally abundant secretase components, particularly proteases, affect Caliciviridae infectivity. Results showed that combining Bacillaceae serine proteases with epsilon-poly-L-lysine (EPL) produced by Streptomyces-a natural antimicrobial-elicited anti-Caliciviridae properties, including against the epidemic HuNoV GII.4_Sydney_2012 strain. In vitro and in vivo biochemical and virological analyses revealed that EPL has two unique synergistic viral inactivation functions. First, it maintains an optimal pH to promote viral surface conformational changes to the protease-sensitive structure. Subsequently, it inhibits viral RNA genome release via partial protease digestion at the P2 and S domains in the VP1 capsid. This study provides new insights regarding the high-dimensional environmental interactions between bacteria and Caliciviridae, while promoting the development of protease-based anti-viral disinfectants.
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  • 文章类型: Journal Article
    单克隆抗体(mAb)是治疗癌症的重要治疗蛋白,自身免疫性和罕见疾病。在生产过程中,storage,和管理过程,这些蛋白质会遇到各种压力因素,如温度波动,振动,和曝光,能够诱导对其结构的化学物理修饰。病毒灭活是下游过程中的关键步骤,它是通过在低pH下滴定mAb来实现的,其次是中和。pH值的变化会导致蛋白质的解折叠和随后的聚集,从而影响他们的生产。这项研究旨在调查在病毒灭活过程中联合暴露于光线是否会进一步影响伊匹单抗的结构完整性。主要用于治疗转移性黑色素瘤的mAb。Ipilimumab的生物物理和生化表征表明,pH变化对其在pH2下不可逆解折叠的稳定性具有相当大的风险。Ipilimumab变性的阈值介于pH2和3之间,并且与蛋白质结构协同性的丧失相关,这是决定蛋白质重折叠的最关键因素。光已经证明会加剧一些局部和全球影响,使得pH值引起的暴露区域更容易受到结构和化学变化的影响。因此,在单克隆抗体的灭菌过程中,应考虑对现实生活中暴露于环境光的具体预防措施,以避免失去治疗活性并增加产量。我们的发现强调了pH优化在保持mAb的结构完整性和治疗功效中的关键作用。此外,对Ipilimumab结构修饰的详细构象研究可能会改善这种有效药物的化学物理知识,并为在某种应激条件下更稳定的产品提出新的生产策略.
    Monoclonal antibodies (mAbs) are an essential class of therapeutic proteins for the treatment of cancer, autoimmune and rare diseases. During their production, storage, and administration processes, these proteins encounter various stressors such as temperature fluctuations, vibrations, and light exposure, able to induce chemico-physical modifications to their structure. Viral inactivation is a key step in downstream processes, and it is achieved by titration of the mAb at low pH, followed by neutralization. The changes of the pH pose a significant risk of unfolding and subsequent aggregation to proteins, thereby affecting their manufacturing. This study aims to investigate whether a combined exposure to light during the viral inactivation process can further affect the structural integrity of Ipilimumab, a mAb primarily used in the treatment of metastatic melanoma. The biophysical and biochemical characterization of Ipilimumab revealed that pH variation is a considerable risk for its stability with irreversible unfolding at pH 2. The threshold for Ipilimumab denaturation lies between pH 2 and 3 and is correlated with the loss of the protein structural cooperativity, which is the most critical factor determining the protein refolding. Light has demonstrated to exacerbate some local and global effects making pH-induced exposed regions more vulnerable to structural and chemical changes. Therefore, specific precautions to real-life exposure to ambient light during the sterilization process of mAbs should be considered to avoid loss of the therapeutic activity and to increase the yield of production. Our findings underscore the critical role of pH optimization in preserving the structural integrity and therapeutic efficacy of mAbs. Moreover, a detailed conformational study on the structural modifications of Ipilimumab may improve the chemico-physical knowledge of this effective drug and suggest new production strategies for more stable products under some kind of stress conditions.
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  • 文章类型: Journal Article
    甲醛灭活的脊髓灰质炎病毒颗粒的电化学分析表明,D抗原浓度与脊髓灰质炎病毒样品的最大振幅电流强度之间存在关系。因此,所得信号被鉴定为脊髓灰质炎病毒表面蛋白的电化学氧化。使用衣壳蛋白氨基酸残基的电氧化注册,通过5kGy剂量加速的电子灭活的脊髓灰质炎病毒颗粒的比较电化学分析,10kGy,15kGy,25kGy,在室温下进行30kGy。辐射剂量的增加伴随着电氧化信号的增加。在15-30kGy剂量的照射下,检测到脊髓灰质炎病毒衣壳蛋白的电氧化信号显着增加。获得的数据表明,在脊髓灰质炎病毒灭活条件下,脊髓灰质炎病毒衣壳蛋白的谱变化和电氧化信号增加与表面蛋白结构重组程度的增加和D-抗原保存不足有关。
    Electrochemical profiling of formaldehyde-inactivated poliovirus particles demonstrated a relationship between the D-antigen concentration and the intensity of the maximum amplitude currents of the poliovirus samples. The resultant signal was therefore identified as electrochemical oxidation of the surface proteins of the poliovirus. Using registration of electrooxidation of amino acid residues of the capsid proteins, a comparative electrochemical analysis of poliovirus particles inactivated by electrons accelerated with doses of 5 kGy, 10 kGy, 15 kGy, 25 kGy, 30 kGy at room temperature was carried out. An increase in the radiation dose was accompanied by an increase in electrooxidation signals. A significant increase in the signals of electrooxidation of poliovirus capsid proteins was detected upon irradiation at doses of 15-30 kGy. The data obtained suggest that the change in the profile and increase in the electrooxidation signals of poliovirus capsid proteins are associated with an increase in the degree of structural reorganization of surface proteins and insufficient preservation of the D-antigen under these conditions of poliovirus inactivation.
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  • 文章类型: Journal Article
    尽管氯消毒病毒至关重要,我们对不同病毒对氯的相对敏感性以及病毒消毒速率常数与环境参数之间牢固的定量关系的基本理解仍然有限。我们对游离氯的病毒灭活进行了系统的审查,并使用所得数据集开发了线性混合模型,该模型根据实验条件估算了病毒的氯灭活速率常数。在我们的系统评价中收集了570个数据点,在广泛的环境条件下代表82种病毒。在参考条件(pH=7.53,T=20°C,[Cl-]<50mM)跨越4个数量级,范围从0.0196到1150Lmg-1min-1,并揭示了病毒之间的重要趋势。而普通的替代噬菌体MS2并不能作为许多人类病毒的保守氯消毒替代品,CVB5是数据集中最具抗性的病毒之一。该模型量化了pH的作用,温度,和氯化物在病毒中的水平,和在线工具允许用户估计病毒和感兴趣的条件的速率常数。该模型的结果确定了当前美国EPA饮用水消毒要求中的潜在缺点。
    Despite the critical importance of virus disinfection by chlorine, our fundamental understanding of the relative susceptibility of different viruses to chlorine and robust quantitative relationships between virus disinfection rate constants and environmental parameters remains limited. We conducted a systematic review of virus inactivation by free chlorine and used the resulting data set to develop a linear mixed model that estimates chlorine inactivation rate constants for viruses based on experimental conditions. 570 data points were collected in our systematic review, representing 82 viruses over a broad range of environmental conditions. The harmonized inactivation rate constants under reference conditions (pH = 7.53, T = 20 °C, [Cl-] < 50 mM) spanned 5 orders of magnitude, ranging from 0.0196 to 1150 L mg-1 min-1, and uncovered important trends between viruses. Whereas common surrogate bacteriophage MS2 does not serve as a conservative chlorine disinfection surrogate for many human viruses, CVB5 was one of the most resistant viruses in the data set. The model quantifies the role of pH, temperature, and chloride levels across viruses, and an online tool allows users to estimate rate constants for viruses and conditions of interest. Results from the model identified potential shortcomings in current U.S. EPA drinking water disinfection requirements.
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  • 文章类型: Journal Article
    气溶胶颗粒(气溶胶)和液滴中病毒的灭活取决于许多因素,但确切的失活机制尚不清楚。该系统涉及复杂的物理和生化相互作用。我们回顾了文献,以建立有关这些机制的最新知识并确定知识差距。我们确定了168篇相关论文,并根据以下因素对结果进行了分组:病毒类型和结构,气溶胶或液滴大小,温度,相对湿度(RH)和蒸发,气溶胶或液滴的化学成分,pH和大气成分。这些因素影响病毒体周围的动态微环境,因此可能影响其失活。结果表明,随着载体气溶胶或液滴蒸发并与周围空气平衡,病毒会经历双相衰变。以及它们最终的物理状态(液体,半固体或固体)取决于RH。病毒稳定性,相对湿度和温度是相互关联的,但RH的影响是多方面的,仍然没有完全理解。关于pH和大气成分对病毒稳定性的影响的研究提出了需要进一步探索的新问题。在大液滴和培养基中研究病毒灭活的频繁实践可能会限制我们对与传播相关的灭活机制的理解,因此,我们鼓励在未来的研究中使用生理相关大小和组成的颗粒。
    The inactivation of viruses in aerosol particles (aerosols) and droplets depends on many factors, but the precise mechanisms of inactivation are not known. The system involves complex physical and biochemical interactions. We reviewed the literature to establish current knowledge about these mechanisms and identify knowledge gaps. We identified 168 relevant papers and grouped results by the following factors: virus type and structure, aerosol or droplet size, temperature, relative humidity (RH) and evaporation, chemical composition of the aerosol or droplet, pH and atmospheric composition. These factors influence the dynamic microenvironment surrounding a virion and thus may affect its inactivation. Results indicate that viruses experience biphasic decay as the carrier aerosols or droplets undergo evaporation and equilibrate with the surrounding air, and their final physical state (liquid, semi-solid or solid) depends on RH. Virus stability, RH and temperature are interrelated, but the effects of RH are multifaceted and still not completely understood. Studies on the impact of pH and atmospheric composition on virus stability have raised new questions that require further exploration. The frequent practice of studying virus inactivation in large droplets and culture media may limit our understanding of inactivation mechanisms that are relevant for transmission, so we encourage the use of particles of physiologically relevant size and composition in future research.
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  • 文章类型: Journal Article
    为了安全地处理传染性病原体,欧洲实验室必须遵守特定的EC指令,世界卫生组织(WHO)的国家法规和建议。为了防止实验室获得性感染(LAI)和病原体传播,一项关键的生物安全规则要求,除非证明缺乏传染性,否则在生物安全柜(BSC)外操作的任何感染性材料(临床标本或研究样品)都必须灭活。这种灭活过程是生物安全的关键步骤,必须以严格的实验鉴定和验证程序为指导。然而,用于诊断或研究实验室,此过程与通用标准操作程序(SOP)不协调,而是基于个人风险评估和一般国际准则,这些准则可能在重大疫情或大流行等紧急情况下造成问题。本文综述了病毒灭活方法,概述当前的监管框架,它的局限性以及可以改善生物安全性的许多方法。
    For handling safely infectious agents, European laboratories must comply with specific EC Directives, national regulations and recommendations from the World Health Organization (WHO). To prevent laboratory acquired infections (LAIs) and pathogens dissemination, a key biosafety rule requires that any infectious material (clinical specimens or research samples) manipulated outside a biosafety cabinet (BSC) must be inactivated unless the lack of infectivity is proven. This inactivation process is a crucial step for biosafety and must be guided by a rigorous experimental qualification and validation procedure. However, for diagnostic or research laboratories, this process is not harmonized with common standard operation procedures (SOPs) but based on individual risk assessment and general international guidelines which can pose problems in emergency situations such as major outbreaks or pandemics. This review focuses on viral inactivation method, outlining the current regulatory framework, its limitations and a number of ways in which biosafety can be improved.
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  • 文章类型: Journal Article
    尽管在流行地区持续爆发黄热病病毒(YFV),关于其环境稳定性或有效灭活指南的数据有限。这里,我们评估了YFV17D疫苗株对乙醇灭活的敏感性,2-丙醛,世界卫生组织(WHO)-推荐的手擦配方I和II,以及表面消毒剂。此外,通过WHO推荐的手擦制剂I和II测试了两种致病菌株,以比较灭活动力学。此外,评估了疫苗株的环境稳定性。YFV17D颗粒在室温下显示约13天的感染性半衰期衰减曲线。尽管环境稳定,YFV被醇有效灭活,世卫组织推荐的手工配方,和五种经测试的表面消毒剂中的四种。这些结果可用于定义防止非媒介传播的YFV传播的消毒方案。
    Despite continued outbreaks of yellow fever virus (YFV) in endemic regions, data on its environmental stability or guidelines for its effective inactivation is limited. Here, we evaluated the susceptibility of the YFV 17D vaccine strain to inactivation by ethanol, 2-propanol, World Health Organization (WHO)-recommended hand rub formulations I and II, as well as surface disinfectants. In addition, two pathogenic strains were tested to compare inactivation kinetics by WHO-recommended hand rub formulations I and II. Furthermore, environmental stability of the vaccine strain was assessed. YFV 17D particles displayed infectivity half-life decay profiles of ~13 days at room temperature. Despite this extended environmental stability, YFV was efficiently inactivated by alcohols, WHO-recommended hand formulations, and four out of five tested surface disinfectants. These results are useful in defining disinfection protocols to prevent non-vector borne YFV transmission.
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  • 文章类型: Letter
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  • 文章类型: Journal Article
    背景:灭活卵巢副痘病毒(iPPVO)对先天免疫细胞具有很强的免疫调节作用,使它成为一个有吸引力的治疗候选人。然而,关于iPPVO诱导的免疫反应中涉及的信号通路知之甚少。
    方法:在本研究中,我们系统地分析了不同类型的树突状细胞(DC)如何对iPPVO(Zylexis,菌株D1710)通过流式细胞术和ELISA在BALB/c和C57BL/c小鼠中,并通过蛋白质印迹和蛋白质谱分析研究了哪种信号通路与DC活化有关。
    结果:我们证明了骨髓来源的常规DCs(BM-cDCs)和骨髓来源的浆细胞样DCs(BM-pDCs)成熟并分泌IFN-α/β,以响应Zylexis刺激两种小鼠品系。同样,Zylexis促进pDC分泌IL-12/23p40和TNF。然而,在BALB/c小鼠中诱导IL-12/23p40和cDC分泌TNF,但在C57BL/6小鼠中不诱导。分析潜在的信号通路显示,iPPVO诱导的cDCs成熟是TLR9独立的,而pDC的成熟部分依赖于TLR9途径。此外,在两种小鼠品系中,cDC产生促炎细胞因子和pDC分泌IFN-α/β部分依赖于TLR9途径。因此,其他信号通路似乎参与DCs对iPPVO的反应,由蛋白质分析支持。
    结论:我们的数据为iPPVO传感器的多样性及其在不同菌株和物种之间的不同影响提供了有用的见解。
    BACKGROUND: Inactivated parapoxvirus ovis (iPPVO) exerts strong immunomodulatory effects on innate immune cells, making it an attractive therapeutic candidate. However, little is known about the signaling pathways that are involved in iPPVO-induced immune responses.
    METHODS: In this study, we systematically analyzed how different types of dendritic cells (DCs) react to iPPVO (Zylexis, strain D1701) in both BALB/c and C57BL/6 mice by flow cytometry and ELISAs, and investigated which signaling pathway is related to DC activation by Western blotting and protein profiling.
    RESULTS: We demonstrated that bone marrow-derived conventional DCs (BM-cDCs) and bone marrow-derived plasmacytoid DCs (BM-pDCs) matured and secreted type I interferons in response to Zylexis stimulation in both mouse strains. Similarly, Zylexis promoted the secretion of IL-12/23p40 and TNF by pDCs. However, IL-12/23p40 and TNF secretion by cDCs were induced in BALB/c mice but not in C57BL/6 mice. Analyzing the underlying signaling pathways revealed that iPPVO-induced maturation of cDCs was Toll-like receptor 9 (TLR9) independent, while the maturation of pDCs partially depended on the TLR9 pathway. Moreover, the production of proinflammatory cytokines by cDCs and the secretion of IFN-α/β by pDCs partially depended on the TLR9 pathway in both mouse strains. Therefore, other signaling pathways seem to participate in the response of DCs to iPPVO, supported by protein profiling.
    CONCLUSIONS: Our data provide useful insights into the diversity of iPPVO sensors and their varying effects across different strains and species.
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