Echinodermata

棘皮病
  • 文章类型: Journal Article
    高纬度峡湾可以作为沉积物陷阱,轴承不同类型的代理,从地球化学到微古生物学,使它们成为古环境重建的特殊工具。然而,可以存在一些非常规的代理,可以用来描述对过去变化的全面和详尽的解释。这里,研究埃迪斯托入口(罗斯海,南极洲)我们使用了不规则的棘突棘和蛇类(Ophionotusvictoriae)小骨来追踪最近3.6kyrsBP的环境变化。不规则的类孔虫可以作为有机物含量的代表,而O.维多利亚小骨可以用作稳定的海冰循环以及有机沉积事件的代表。O.维多利亚释放大量小骨,对人口的估计相当具有挑战性;尽管如此,存在数据,可以很容易地收集。通过将生成加法模型应用于这些数据的地层分布,我们检测到一个以前未被其他传统代理注意到的环境阶段:蛇形最佳(2-1.5kyrsBP)。总之,在这里,我们演示如何将棘皮动物的存在用作有价值的信息来源,同时证明了对二元数据进行建模以检测全新世地层记录中的长期趋势的潜力。
    High Latitude fjords can serve as sediment trap, bearing different type of proxies, from geochemical to micropaleontological ones, making them exceptional tools for paleoenvironmental reconstruction. However, some unconventional proxies can be present and can be used to depict a comprehensive and exhaustive interpretation of past changes. Here, studying a sediment core in Edisto Inlet (Ross Sea, Antarctica) we used irregular echinoid spines and ophiuroids (Ophionotus victoriae) ossicles to trace environmental changes throughout the last 3.6 kyrs BP. Irregular echinoids can serve as proxy for the organic matter content, while O. victoriae ossicles can be used as proxy for steady sea-ice cycle along with organic deposition events. O. victoriae release a high number of ossicles, making estimation about the population quite challenging; still, presence data, can be easily collected. By applying Generative Additive Models to the stratigraphical distribution of these data, we detected an environmental phase that was previously unnoticed by other traditional proxies: the Ophiuroid Optimum (2-1.5 kyrs BP). In conclusion, here we demonstrate how echinoderm presence can be used as a valuable source of information, while proving the potential of modelling binary data to detect long-term trend in Holocene stratigraphical records.
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  • 文章类型: Journal Article
    Sox基因家族,广泛分布在整个动物界的转录因子集合,在许多发育过程中起着至关重要的作用。棘皮动物在许多研究领域占有举足轻重的地位,比如神经科学,性别决定和分化,和胚胎发育。然而,到目前为止,尚未进行全面的研究来表征和分析棘皮动物中的Sox基因。在本研究中,使用生物信息学方法分析了11种棘皮动物中Sox家族基因的进化和表达。结果显示共有70个Sox基因,不同棘皮动物的计数范围从5到8。系统发育分析表明,鉴定的Sox基因可以分为七个不同的类别:SoxB1类,SoxB2类,SoxC类,SoxD类,SoxE类,SoxF类和SoxH类。值得注意的是,SoxB1,SoxB2和SoxF基因普遍存在于所有研究的棘皮动物中,这表明这些基因在棘皮动物中可能是保守的。在三种棘皮动物中观察到的Sox基因的时空表达模式表明,各种Sox成员发挥着不同的功能作用。值得注意的是,SoxB1可能参与棘皮动物卵巢发育,而SoxH可能在海星和海参的睾丸发育中起关键作用。总的来说,本研究为探索棘皮动物中的Sox基因提供了分子基础,为未来的系统发育和基因组研究提供了宝贵的资源。
    The Sox gene family, a collection of transcription factors widely distributed throughout the animal kingdom, plays a crucial role in numerous developmental processes. Echinoderms occupy a pivotal position in many research fields, such as neuroscience, sex determination and differentiation, and embryonic development. However, to date, no comprehensive study has been conducted to characterize and analyze Sox genes in echinoderms. In the present study, the evolution and expression of Sox family genes across 11 echinoderms were analyzed using bioinformatics methods. The results revealed a total of 70 Sox genes, with counts ranging from 5 to 8 across different echinoderms. Phylogenetic analysis revealed that the identified Sox genes could be categorized into seven distinct classes: the SoxB1 class, SoxB2 class, SoxC class, SoxD class, SoxE class, SoxF class and SoxH class. Notably, the SoxB1, SoxB2, and SoxF genes were ubiquitously present in all the echinoderms studied, which suggests that these genes may be conserved in echinoderms. The spatiotemporal expression patterns observed for Sox genes in the three echinoderms indicated that various Sox members perform distinct functional roles. Notably, SoxB1 is likely involved in echinoderm ovary development, while SoxH may play a crucial role in testis development in starfish and sea cucumber. In general, the present investigation provides a molecular foundation for exploring the Sox gene in echinoderms, providing a valuable resource for future phylogenetic and genomic studies.
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  • 文章类型: Journal Article
    基底膜(BMs)是分离上皮的细胞外基质的薄层,内皮,肌肉细胞,和邻近间质结缔组织的神经细胞。BMS在几乎所有的多细胞动物中无处不在,它们的组成在整个Metazoa中高度保守。人们对BM的机械功能越来越感兴趣,包括改变的BM硬度参与发育和病理学,特别是癌症转移,这可以通过BM不稳定来促进。已经假定这种BM弱化主要通过基质金属蛋白酶的酶促降解而发生。然而,新出现的证据表明,非酶机制也可能有贡献。在brittlestars(棘皮动物,Ophiuroidea),ThetendonslinkingthemusculaturetotheendskelineconsistsofextensionsofmuscellBMs.Duringtheprocessofbrittlestarautcut,为了自卫而分离武器,由于BM衍生的肌腱迅速不稳定和破裂,肌肉脱离了内骨骼。本文提供了有关非棘皮动物BM的结构组织和生物力学的最新知识的广泛概述,将其与Brittlestar肌腱的等效信息进行比较,并讨论了BM表现出的弱化现象与brittlestar肌腱之间的可能关系,以及后者作为BM失稳模型系统的潜在平移值。
    Basement membranes (BMs) are thin layers of extracellular matrix that separate epithelia, endothelia, muscle cells, and nerve cells from adjacent interstitial connective tissue. BMs are ubiquitous in almost all multicellular animals, and their composition is highly conserved across the Metazoa. There is increasing interest in the mechanical functioning of BMs, including the involvement of altered BM stiffness in development and pathology, particularly cancer metastasis, which can be facilitated by BM destabilization. Such BM weakening has been assumed to occur primarily through enzymatic degradation by matrix metalloproteinases. However, emerging evidence indicates that non-enzymatic mechanisms may also contribute. In brittlestars (Echinodermata, Ophiuroidea), the tendons linking the musculature to the endoskeleton consist of extensions of muscle cell BMs. During the process of brittlestar autotomy, in which arms are detached for the purpose of self-defense, muscles break away from the endoskeleton as a consequence of the rapid destabilization and rupture of their BM-derived tendons. This contribution provides a broad overview of current knowledge of the structural organization and biomechanics of non-echinoderm BMs, compares this with the equivalent information on brittlestar tendons, and discusses the possible relationship between the weakening phenomena exhibited by BMs and brittlestar tendons, and the potential translational value of the latter as a model system of BM destabilization.
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  • 文章类型: Journal Article
    欧洲脆性恒星Amphiurafiliformis发出蓝光,通过Renilla类荧光素酶,这取决于腔肠素的饮食获取。关于荧光素跨季节的可用性以及一次增强腔肠素之后发光能力的持久性,仍然存在疑问。迄今为止,没有研究探索季节性,长期监测这些发光能力或跟踪光生组织中荧光素酶的表达。通过多学科分析,我们证明,发光能力在整个成年生活中根据腔肠素的外源性获取而发展。此外,在臂组织内没有检测到腔肠素储存形式。荧光素酶的表达在整个季节持续存在,和腔肠素的存在脆性星的饮食是唯一的限制因素的生物发光反应。没有观察到季节性变化,涉及持续存在含有腔肠素的猎物。超微结构描述提供了形态学背景,以研究荧光素获取过程中归因于腔肠素的绿色自发荧光信号。最后,组织学分析支持色素鞘将光线引导到脊柱尖端的假设。这些见解提高了我们对这个挖掘脆性恒星中生物发光现象的理解。
    The European brittle star Amphiura filiformis emits blue light, via a Renilla-like luciferase, which depends on the dietary acquisition of coelenterazine. Questions remain regarding luciferin availability across seasons and the persistence of luminous capabilities after a single boost of coelenterazine. To date, no study has explored the seasonal, long-term monitoring of these luminous capabilities or the tracking of luciferase expression in photogenic tissues. Through multidisciplinary analysis, we demonstrate that luminous capabilities evolve according to the exogenous acquisition of coelenterazine throughout adult life. Moreover, no coelenterazine storage forms are detected within the arms tissues. Luciferase expression persists throughout the seasons, and coelenterazine\'s presence in the brittle star diet is the only limiting factor for the bioluminescent reaction. No seasonal variation is observed, involving a continuous presence of prey containing coelenterazine. The ultrastructure description provides a morphological context to investigate the green autofluorescence signal attributed to coelenterazine during luciferin acquisition. Finally, histological analyses support the hypothesis of a pigmented sheath leading light to the tip of the spine. These insights improve our understanding of the bioluminescence phenomenon in this burrowing brittle star.
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  • 文章类型: Dataset
    冷水物种Ophiurasarsii,一颗脆弱的星星,是北极大陆架地区的重要棘皮动物,对气候变化高度敏感。然而,缺乏高质量的基因组阻碍了对其适应性进化的透彻理解。在这项研究中,我们报道了O.sarsii的第一个染色体水平基因组组装。基因组组装总计1.57Gb,包含19条染色体,GC含量为37.11%,支架N50长度为78.03Mb。基准通用单拷贝直射同源物(BUSCO)评估得出该组件的完整性估计为93.5%。我们预测了总共27,099个蛋白质编码基因,带有25,079个功能注释。基因组由58.09%的转座因子组成。O.sarsii的染色体水平基因组有助于我们了解海洋生物的起源和进化。
    The cold-water species Ophiura sarsii, a brittle star, is a key echinoderm in the Arctic continental shelf region, highly sensitive to climate change. However, the absence of a high-quality genome has hindered a thorough understanding of its adaptive evolution. In this study, we reported the first chromosome-level genome assembly of O. sarsii. The genome assembly totalled 1.57 Gb, encompassing 19 chromosomes with a GC content of 37.11% and a scaffold N50 length of 78.03 Mb. The Benchmarking Universal Single-Copy Orthologs (BUSCO) assessment yielded a completeness estimate of 93.5% for this assembly. We predicted a total of 27,099 protein-coding genes, with 25,079 functionally annotated. The genome was comprised of 58.09% transposable elements. This chromosome-level genome of O. sarsii contributes to our understanding of the origin and evolution of marine organisms.
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  • 文章类型: Journal Article
    自体切开术是指自我截肢,其中肢体或器官的丧失通常被认为是(1)响应于应激性外部刺激;(2)自愿和紧张地介导;(3)由提高效率并同时介导成本的适应性特征支持;和(4)由可预测的断裂平面在形态上描绘。据估计,这种现象在整个动物界已经独立进化了九个不同的时间,出现在许多不同的分类群,包括脊椎动物和无脊椎动物以及水生动物和陆生动物。海洋无脊椎动物以多种方式使用这种行为,尚未进行全球审查和严格审查。这里,来自海洋无脊椎动物分类群的已发表数据被用于探索作为自动切开术的进化驱动因素的伤害实例。研究结果表明,门(例如棘皮动物和节肢动物)可能经历高的损伤率(组织损伤或丢失)更有可能能够进行自动切开术。此外,这篇综述着眼于各种形态学,生理和环境条件,这些条件驱动了海洋无脊椎动物的进化或维持了自断行为。最后,探索了在发展更可持续,生态入侵较少的渔业中使用自生能力。
    Autotomy refers to self-amputation where the loss of a limb or organ is generally said to be (1) in response to stressful external stimuli; (2) voluntary and nervously mediated; (3) supported by adaptive features that increase efficiency and simultaneously mediate the cost; and (4) morphologically delineated by a predictable breakage plane. It is estimated that this phenomenon has evolved independently nine different times across the animal kingdom, appearing in many different taxa, including vertebrate and invertebrate as well as aquatic and terrestrial animals. Marine invertebrates use this behaviour in a diversity of manners that have yet to be globally reviewed and critically examined. Here, published data from marine invertebrate taxa were used to explore instances of injury as an evolutionary driver of autotomy. Findings suggest that phyla (e.g. Echinodermata and Arthropoda) possibly experiencing high rates of injury (tissue damage or loss) are more likely to be able to perform autotomy. Additionally, this review looks at various morphological, physiological and environmental conditions that have either driven the evolution or maintained the behaviour of autotomy in marine invertebrates. Finally, the use of autotomic abilities in the development of more sustainable and less ecologically invasive fisheries is explored.
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  • 文章类型: Journal Article
    通过分裂进行无性繁殖,也称为fissipality,是一些小行星群的共同特征,尤其是在ophiactid脆性恒星中。大多数碎裂的脆性恒星显示出六个射线,而不是通常的五个射线,作为外生体生活在宿主生物上,并利用克隆碎片快速定殖僻静的生境,有效扩大其分布区域的边缘。虽然克隆碎片的生物学和生态学比较好理解,对这种现象的演化和地质历史几乎一无所知。这里,我们描述了一个特殊的化石,来自德国侏罗纪晚期的一个铰接式六臂脆性恒星,显示一半的身体在再生过程中,并将其分配给新物种Ophiactishexsp。11月。系统发育推断表明,该化石代表了现存的蛇形科最古老的成员。因为蛇纹石标本显示出原始的六重对称性,并结合了通常在上蛇类中发现的形态,与最近的粘连性交亲一致,我们假设再生身体的一半是残疾的迹象。因此,蛇形动物表明,侏罗纪晚期在小行星棘皮动物中建立了无性繁殖的一种手段。
    Asexual reproduction by means of splitting, also called fissiparity, is a common feature in some asterozoan groups, especially in ophiactid brittle stars. Most fissiparous brittle stars show six instead of the usual five rays, live as epibionts on host organisms, and use clonal fragmentation to rapidly colonize secluded habitats and effectively expand the margins of their distribution area. While the biology and ecology of clonal fragmentation are comparatively well understood, virtually nothing is known about the evolution and geological history of that phenomenon. Here, we describe an exceptional fossil of an articulated six-armed brittle star from the Late Jurassic of Germany, showing one body half in the process of regeneration, and assign it to the new species Ophiactis hex sp. nov. Phylogenetic inference shows that the fossil represents the oldest member of the extant family Ophiactidae. Because the Ophiactis hex specimen shows an original six-fold symmetry combined with a morphology typically found in epizoic ophiuroids, in line with recent fissiparous ophiactid relatives, we assume that the regenerating body half is an indication for fissiparity. Ophiactis hex thus shows that fissiparity was established as a means of asexual reproduction in asterozoan echinoderms by the Late Jurassic.
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  • 文章类型: Journal Article
    高血压,与心脏病和过早死亡有关的主要健康问题,由于现有药物的副作用,促使人们寻找替代疗法。低营养海洋生物的可持续收获不仅增强了粮食安全,而且还提供了多种生物活性分子,包括肽。尽管只包含一小部分活性天然化合物,由于其大小,肽是药物开发的理想选择,稳定性,和抗降解。我们的评论评估了来自选定的海洋无脊椎动物门的肽和蛋白质的抗高血压特性,检查所使用的各种方法及其在制药中的应用,补充剂,和功能性食品。关于某些海洋无脊椎动物的抗高血压作用的研究相当多,然而,许多物种仍未被检查。一系列的评估方法,特别是ACE抑制,使结果的比较复杂化。体外和动物体内研究的优势表明需要更多的临床研究以将肽转化为药物。我们的发现为进一步探索这些有前途的海洋无脊椎动物奠定了基础,强调需要平衡科学发现和海洋保护以实现可持续资源利用。
    Hypertension, a major health concern linked to heart disease and premature mortality, has prompted a search for alternative treatments due to side effects of existing medications. Sustainable harvesting of low-trophic marine organisms not only enhances food security but also provides a variety of bioactive molecules, including peptides. Despite comprising only a fraction of active natural compounds, peptides are ideal for drug development due to their size, stability, and resistance to degradation. Our review evaluates the anti-hypertensive properties of peptides and proteins derived from selected marine invertebrate phyla, examining the various methodologies used and their application in pharmaceuticals, supplements, and functional food. A considerable body of research exists on the anti-hypertensive effects of certain marine invertebrates, yet many species remain unexamined. The array of assessments methods, particularly for ACE inhibition, complicates the comparison of results. The dominance of in vitro and animal in vivo studies indicates a need for more clinical research in order to transition peptides into pharmaceuticals. Our findings lay the groundwork for further exploration of these promising marine invertebrates, emphasizing the need to balance scientific discovery and marine conservation for sustainable resource use.
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  • 文章类型: Journal Article
    生物矿化显然在不同的门中独立进化,使用不同的矿物质,有机支架,和基因调控网络(GRN)。然而,来自单细胞生物的多种真核生物,通过棘皮动物到脊椎动物,在生物矿化过程中使用肌动球蛋白网络。具体来说,肌动球蛋白重塑蛋白,Rho相关卷曲螺旋激酶(ROCK)调节脊椎动物生物矿化细胞的细胞分化和基因表达,然而,人们对岩石在无脊椎动物生物矿化中的作用知之甚少。这里,我们发现岩石控制着地层,增长,海胆幼虫方解石针状体的形态。ROCK表达在血管内皮生长因子(VEGF)信号传导下游的海胆骨骼细胞中升高。ROCK抑制导致骨骼丢失并破坏骨骼生成基因表达。针状形成后的ROCK抑制降低了针状伸长率并诱导异位针状分支。当在骨骼生成细胞培养物中抑制ROCK时,观察到类似的骨骼生成表型。表明这些表型是由于在骨骼形成细胞中特异性的ROCK活性。在肌动球蛋白网络的直接扰动下,还观察到骨骼生长减少和分支增强。我们建议ROCK和肌动球蛋白机械是独立使用的,不同GRN的下游,调节真核生物的生物矿物生长和形态。
    Biomineralization had apparently evolved independently in different phyla, using distinct minerals, organic scaffolds, and gene regulatory networks (GRNs). However, diverse eukaryotes from unicellular organisms, through echinoderms to vertebrates, use the actomyosin network during biomineralization. Specifically, the actomyosin remodeling protein, Rho-associated coiled-coil kinase (ROCK) regulates cell differentiation and gene expression in vertebrates\' biomineralizing cells, yet, little is known on ROCK\'s role in invertebrates\' biomineralization. Here, we reveal that ROCK controls the formation, growth, and morphology of the calcite spicules in the sea urchin larva. ROCK expression is elevated in the sea urchin skeletogenic cells downstream of the Vascular Endothelial Growth Factor (VEGF) signaling. ROCK inhibition leads to skeletal loss and disrupts skeletogenic gene expression. ROCK inhibition after spicule formation reduces the spicule elongation rate and induces ectopic spicule branching. Similar skeletogenic phenotypes are observed when ROCK is inhibited in a skeletogenic cell culture, indicating that these phenotypes are due to ROCK activity specifically in the skeletogenic cells. Reduced skeletal growth and enhanced branching are also observed under direct perturbations of the actomyosin network. We propose that ROCK and the actomyosin machinery were employed independently, downstream of distinct GRNs, to regulate biomineral growth and morphology in Eukaryotes.
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  • 文章类型: Journal Article
    在阿尔及利亚,对Holothuriodea尤其是CucumariidaeLudwig家族的研究很少,1894年。在Mostaganem海岸(阿尔及利亚西北部)的商业底栖拖网渔船上捕获了一个标本。基于对形态学的详细研究,解剖和内骨骼特征,这个标本被证实是Ocnusplanci(Brandt,1835).我们在此将其报告为阿尔及利亚西海岸的首次观察结果。该物种已在地中海中多次记录。它的特点是钙质环,其径向板比径向板长,身体壁中存在不同尺寸的纽扣和穿孔纽扣板,以及各种形状的玫瑰花结,有小穿孔的篮子和结节。
    In Algeria, few studies have been carried on the Holothuriodea especially the family Cucumariidae Ludwig, 1894. A specimen was caught as bycatch from a commercial benthic trawler on the Mostaganem coast (northwest of Algeria). Based on a detailed study of the morphological, anatomical and endoskeletal characters, this specimen is confirmed to be Ocnus planci (Brandt, 1835). We report it herein as the first observation from the Algerian west coast. This species has been recorded several times in the Mediterranean sea. It is characterised by a calcareous ring, whose radial plates are longer than the interradial plates, the presence of buttons and perforated button plates of different sizes in the body wall, as well as various shapes of rosettes, baskets and nodules with small perforations.
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