Salmonella

沙门氏菌
  • 文章类型: Journal Article
    食源性疾病,代表全球重大的食品安全和公共卫生挑战,在发病率方面没有很好的记录,特别是在中国以急性胃肠炎(AGI)为特征的病例。
    这项研究开发了一个金字塔模型来估计五种病原体的发病率,按性别和年龄分层。95%不确定度区间(UI)的每100,000人的估计发病率如下:诺如病毒,3,188.28(95%UI:2,518.03,7,296.96);沙门氏菌属。,1,295.59(95%UI:1,002.62,1,573.11);腹泻性大肠杆菌(DEC),782.62(95%UI:651.19,932.05);副溶血性弧菌,404.06(95%UI:342.19,468.93);志贺氏菌属。,26.73(95%UI:21.05,33.46)。
    这项研究阐明了不同性别和年龄组的发病率,从而确定有针对性的预防干预措施的优先人群,以减轻疾病负担。这些见解对于制定公共卫生政策和管理食品安全风险至关重要。
    UNASSIGNED: Foodborne diseases, representing significant food safety and public health challenges globally, are not well-documented in terms of incidence, particularly for cases characterized by acute gastroenteritis (AGI) in China.
    UNASSIGNED: This study developed a pyramid model to estimate the incidence of five pathogens, stratified by gender and age. The estimated incidences per 100,000 people with 95% uncertainty intervals (UI) are as follows: Norovirus, 3,188.28 (95% UI: 2,518.03, 7,296.96); Salmonella spp., 1,295.59 (95% UI: 1,002.62, 1,573.11); diarrheagenic E. coli (DEC), 782.62 (95% UI: 651.19, 932.05); Vibrio parahaemolyticus, 404.06 (95% UI: 342.19, 468.93); and Shigella spp., 26.73 (95% UI: 21.05, 33.46).
    UNASSIGNED: This study elucidates the incidence rates across various gender and age groups, thereby identifying priority populations for targeted preventive interventions aimed at reducing disease burden. These insights are crucial for the development of public health policies and management of food safety risks.
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  • 文章类型: Journal Article
    在欧盟,沙门氏菌病是报道的最重要的人畜共患病之一。禽肉和蛋制品是与沙门氏菌存在相关的最常见的食物基质。此外,野生动物和家畜可能是一个重要的水库,可能有利于病原体直接和间接传播给人类。沙门氏菌属。会感染食肉或杂食性野生鸟类,这些鸟类经常摄入暴露于粪便污染的食物和水。圈养的鸟类可以充当沙门氏菌的水库。摄入受感染的猎物或饲料后。在本文中,我们描述了在意大利野生动物中心的鸟舍中托管的几种猛禽中不同沙门氏菌血清变型的分离,以及用作饲料但供人类食用的生鸡颈。通过整合经典方法和全基因组测序分析来进行菌株的表征。在禽肉和鸟类中分离出的S.bredeney菌株属于同一簇,其中一些是多药耐药(MDR),并携带Col(pHAD28)质粒携带的qnrB19(氟)喹诺酮耐药基因,从而确认感染源。不同的是,在饲料和猛禽中发现的婴儿链球菌都是MDR,携带了一个新兴的婴儿链球菌(pESI)样质粒,属于不同的簇,可能提示长期感染或存在其他未被发现的来源。由于助长人类病原体的风险很高,圈养物种饲料的控制和处理至关重要。
    In the European Union, salmonellosis is one of the most important zoonoses reported. Poultry meat and egg products are the most common food matrices associated with Salmonella presence. Moreover, wild and domestic animals could represent an important reservoir that could favour the direct and indirect transmission of pathogens to humans. Salmonella spp. can infect carnivorous or omnivorous wild birds that regularly ingest food and water exposed to faecal contamination. Birds kept in captivity can act as reservoirs of Salmonella spp. following ingestion of infected prey or feed. In this paper, we describe the isolation of different Salmonella serovars in several species of raptors hosted in aviaries in an Italian wildlife centre and in the raw chicken necks used as their feed but intended for human consumption. Characterisations of strains were carried out by integrating classical methods and whole genome sequencing analysis. The strains of S. bredeney isolated in poultry meat and birds belonged to the same cluster, with some of them being multidrug-resistant (MDR) and carrying the Col(pHAD28) plasmid-borne qnrB19 (fluoro)quinolone resistance gene, thus confirming the source of infection. Differently, the S. infantis found in feed and raptors were all MDR, carried a plasmid of emerging S. infantis (pESI)-like plasmid and belonged to different clusters, possibly suggesting a long-lasting infection or the presence of additional undetected sources. Due to the high risk of fuelling a reservoir of human pathogens, the control and treatment of feed for captive species are crucial.
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  • 文章类型: Journal Article
    目前检测食源性病原体的诊断方法耗时,需要先进的设备,特异性和敏感性较低。磁性纳米粒子(MNPs)和等离子/比色生物传感器(如金纳米粒子(GNPs))具有成本效益,高通量,精确,和快速。本研究旨在验证MNPs和GNPs在早期检测大肠杆菌O157:H7,沙门氏菌中的应用。,空肠弯曲杆菌,牛粪便样本中的单核细胞增生李斯特菌。通过使用以1.5X108CFU/mL的原始浓度调节的鼠伤寒沙门氏菌(ATCC_13311)测定MNPs的捕获效率(CE)。将一(1)mL该细菌悬浮液掺加到牛粪便悬浮液(在9mLPBS中的Ig粪便样品)中并连续稀释十倍。从鼠伤寒沙门氏菌中提取DNA以确定GNP的分析特异性和灵敏度/LOD。结果表明,MNPs的CE范围为99%至100%,可以捕获低至1CFU/mL。GNPs生物传感器的LOD为2.9µg/µL。还在来自38个天然获得的牛粪便样品的DNA上测试了GNP生物传感器。在测试的38个粪便样本中,81.6%(31/38)为肠沙门氏菌阳性。,空肠弯曲菌65.8%(25/38),55.3%(21/38)为单核细胞增生李斯特菌,和50%(19/38)的大肠杆菌O157:H7。我们已经证明MNP和GNP生物传感器可以在低浓度下检测病原体或其DNA。确保整个供应链的食品安全至关重要,鉴于这些病原体可能存在于牛的粪便中,并在屠宰过程中污染牛肉。
    Current diagnostic methods for detecting foodborne pathogens are time-consuming, require sophisticated equipment, and have a low specificity and sensitivity. Magnetic nanoparticles (MNPs) and plasmonic/colorimetric biosensors like gold nanoparticles (GNPs) are cost-effective, high-throughput, precise, and rapid. This study aimed to validate the use of MNPs and GNPs for the early detection of Escherichia coli O157:H7, Salmonella enterica spp., Campylobacter jejuni, and Listeria monocytogenes in bovine fecal samples. The capture efficiency (CE) of the MNPs was determined by using Salmonella Typhimurium (ATCC_13311) adjusted at an original concentration of 1.5 × 108 CFU/mL. One (1) mL of this bacterial suspension was spiked into bovine fecal suspension (1 g of fecal sample in 9 mL PBS) and serially diluted ten-fold. DNA was extracted from Salmonella Typhimurium to determine the analytical specificity and sensitivity/LOD of the GNPs. The results showed that the CE of the MNPs ranged from 99% to 100% and could capture as little as 1 CFU/mL. The LOD of the GNPs biosensor was 2.9 µg/µL. The GNPs biosensor was also tested on DNA from 38 naturally obtained bovine fecal samples. Out of the 38 fecal samples tested, 81.6% (31/38) were positive for Salmonella enterica spp., 65.8% (25/38) for C. jejuni, 55.3% (21/38) for L. monocytogenes, and 50% (19/38) for E. coli O157:H7. We have demonstrated that MNP and GNP biosensors can detect pathogens or their DNA at low concentrations. Ensuring food safety throughout the supply chain is paramount, given that these pathogens may be present in cattle feces and contaminate beef during slaughter.
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  • 文章类型: Journal Article
    背景。本系统评价和荟萃分析的目的是估计感染弯曲杆菌的个体的比例。埃希氏菌,沙门氏菌,志贺氏菌,或耶尔森氏菌会发展为反应性关节炎。方法。进行了系统的审查,包含2024年1月之前发表的英语文章,来自Embase,PubMed,Scopus,和WebofScience数据库。这篇综述包括观察性研究,这些研究报告了弯曲杆菌患者反应性关节炎(ReA)的发生,埃希氏菌,沙门氏菌,志贺氏菌,或耶尔森氏菌感染。数据提取由两名审阅者独立进行。随后,进行了随机效应荟萃分析,使用I2值评估异质性。此外,采用meta回归分析研究水平变量对观察到的异质性的潜在影响。结果。共确定了87项研究;23项报道了弯曲杆菌感染后的ReA发展,7例大肠杆菌感染后的ReA报告,30例报告沙门氏菌病后出现ReA,14在志贺氏菌病后报告了ReA,13例报告了耶尔森氏菌感染后的ReA。出现ReA的弯曲杆菌患者比例为0.03(95%CI[0.01,0.06],I2=97.62%);发生ReA的大肠埃希菌患者比例为0.01(95%CI[0.00,0.06],I2=92.78%);沙门氏菌患者比例为0.04(95%CI[0.02,0.08],I2=97.67%);志贺氏菌患者比例为0.01(95%CI[0.01,0.03],I2=90.64%);发生ReA的耶尔森氏菌患者比例为0.05(95%CI[0.02,0.13],I2=96%)。结论。沙门氏菌的比例很大,志贺氏菌,耶尔森氏菌病例导致了ReA。尽管如此,由于研究之间存在显著的异质性,因此谨慎解释研究结果非常重要.
    Background. The objective of this systematic review and meta-analysis was to estimate the proportions of individuals infected with Campylobacter, Escherichia, Salmonella, Shigella, or Yersinia who develop reactive arthritis. Methods. A systematic review was conducted, encompassing English-language articles published before January 2024, sourced from the Embase, PubMed, Scopus, and Web of Science databases. This review included observational studies that reported the occurrence of reactive arthritis (ReA) among patients with Campylobacter, Escherichia, Salmonella, Shigella, or Yersinia infections. Data extraction was carried out independently by two reviewers. Subsequently, a random-effects meta-analysis was performed, with heterogeneity assessed using the I2 value. Additionally, meta-regression was employed to investigate the potential influence of study-level variables on the observed heterogeneity. Results. A total of 87 studies were identified; 23 reported on ReA development after Campylobacter infection, 7 reported on ReA after Escherichia infection, 30 reported ReA onset after salmonellosis, 14 reported ReA after shigellosis, and 13 reported ReA after Yersinia infection. The proportion of Campylobacter patients who developed ReA was 0.03 (95% CI [0.01, 0.06], I2 = 97.62%); the proportion of Escherichia patients who developed ReA was 0.01 (95% CI [0.00, 0.06], I2 = 92.78%); the proportion of Salmonella patients was 0.04 (95% CI [0.02, 0.08], I2 = 97.67%); the proportion of Shigella patients was 0.01 (95% CI [0.01, 0.03], I2 = 90.64%); and the proportion of Yersinia patients who developed ReA was 0.05 (95% CI [0.02, 0.13], I2 = 96%). Conclusion. A significant proportion of Salmonella, Shigella, and Yersinia cases resulted in ReA. Nonetheless, it is important to interpret the findings cautiously due to the substantial heterogeneity observed between studies.
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  • 文章类型: Case Reports
    爬行动物通常是沙门氏菌的无症状携带者,在成年和非免疫功能低下的动物中,急性形式的典型临床体征的表现被认为是例外。在目前的情况下,一只成年雄性玉米蛇(Pantherophisguttatus)在食用在线购买的饲养小鼠48小时后,因感染性休克而死亡。培养蛇的组织样品和粪便以进行细菌分离。蛇和小鼠肝脏的微生物学检查显示存在肠沙门氏菌亚种。肠道血清型中途。对这两个分离株的全基因组分析表明,它们之间存在高度相关性:对于经典MLST方案,它们属于ST-357型菌株,对于cgMLST方案,它们属于ST171322型菌株。此外,毒力基因分析显示存在stdB和STM3026基因。这份报告传达了一例宠物蛇的食源性沙门氏菌病,从喂食鼠标传输,可能是蛇因感染性休克而死亡的原因。它强调了饲养小鼠作为蛇中沙门氏菌感染来源的相关性以及对人类健康的相关风险。
    Reptiles are usually asymptomatic carriers of Salmonella, with the manifestation of typical clinical signs of acute forms in adult and non-immunocompromised animals being considered exceptions. In the present case, an adult male corn snake (Pantherophis guttatus) was found dead due to septic shock 48 h after consuming a feeder mouse purchased online. The snake\'s tissue samples and faeces were cultured for bacteria isolation. Microbiological examinations of the snake and mouse livers revealed the presence of Salmonella enterica subsp. enterica serovar Midway. A whole-genome analysis of these two isolates showed a high correlation between them: they belonged to the strain type ST-357 for the classic MLST scheme and to the strain type ST 171322 for the cgMLST scheme. Also, a virulence gene analysis revealed the presence of stdB and STM3026 genes. This report conveys a case of food-borne salmonellosis in a pet snake, transmitted from a feeder mouse, likely responsible for the snake\'s death due to septic shock. It highlights the relevance of feeder mice as a source of Salmonella infections in snakes and the associated risks to human health.
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  • 文章类型: Journal Article
    抗菌素耐药性(AMR)细菌的出现已成为全球一个重要的健康问题。主要归因于抗微生物剂在人类和农业环境中的广泛使用。区域和地方AMR监测数据对于实施认识和缓解战略至关重要。本文评估了由大肠杆菌(E.大肠杆菌)和沙门氏菌属。从弗吉尼亚州的不同来源中分离出来,包括农场动物,野生动物,环境,以及2007年至2021年的食品样本。结果基于Kirby-Bauer椎间盘扩散评估方法对选择抗菌药物的敏感性,涵盖了美国食品和药物管理局批准用于临床用途的9个不同类别。链霉素(STR)和四环素(TCY)在大肠杆菌(39.1%)和沙门氏菌(25.2%)中表现出最高的耐药频率,分别。多重耐药性(MDR)在6.6%的大肠杆菌和10.9%的沙门氏菌分离株中明显。值得注意的是,51%的大肠杆菌和36%的沙门氏菌分离株表现出对一种以上的抗微生物剂的抗性。测试的抗微生物剂都不能保证对从调查来源和地区分离的细菌的有效性。研究发现,与其他采样来源相比,从食品中分离出的细菌中的MDR和AMR模式增强。这些发现对于理解当前的AMR格局至关重要,促使制定减轻AMR细菌出现的策略,并从一个健康的角度提倡谨慎使用抗菌药物。
    The emergence of antimicrobial-resistant (AMR) bacteria has become a critical global One Health issue, mainly attributed to the extensive use of antimicrobial agents in human and agricultural settings. Regional and local AMR surveillance data is essential for implementing awareness and mitigation strategies. This article assesses AMR frequency in 1604 bacterial isolates consisting of Escherichia coli (E. coli) and Salmonella spp. isolated from diverse sources in Virginia, including farm animals, wildlife, environment, and food samples from 2007 to 2021. The results are based on the Kirby-Bauer disc diffusion assessment method of susceptibility to select antimicrobial agents, spanning nine distinct categories approved by the US Food and Drug Administration for clinical use. Streptomycin (STR) and tetracycline (TCY) exhibited the highest frequency of resistance in E. coli (39.1%) and Salmonella (25.2%), respectively. Multidrug resistance (MDR) was evident in 6.6% of E. coli and 10.9% of Salmonella isolates. Notably, 51% of E. coli and 36% of Salmonella isolates demonstrated resistance to more than one antimicrobial. None of the tested antimicrobials guaranteed effectiveness against the bacteria isolated from the surveyed sources and regions. The study found heightened MDR and distinct AMR patterns in bacteria isolated from food products compared to other sampled sources. These findings are vital for comprehending the current AMR landscape, prompting the development of strategies to mitigate the emergence of AMR bacteria, and advocating prudent antimicrobial use from a One Health perspective.
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  • 文章类型: Journal Article
    背景:尽管沙门氏菌病被认为是一种食源性人畜共患疾病,由于与主人的密切接触,宠物可以在抗微生物沙门氏菌向人类传播中发挥重要作用。
    目的:为了确定患病率,危险因素,毒力因子,血清型,以及土耳其宠物狗和猫的沙门氏菌耐药性概况,并评估公共卫生风险。此外,对沙门氏菌阳性和沙门氏菌阴性动物的乳酸菌(LAB)进行宏观比较。
    方法:使用国际标准组织(ISO)6579-1:2017和食品药品监督管理局(FDA)的方法比较了培养方法在348个直肠拭子中鉴定沙门氏菌的有效性。根据White-Kauffmann-LeMinor方案,使用载玻片凝集法对阳性分离株进行血清分型,并通过聚合酶链反应(PCR)评估毒力基因(invA和stn)的存在。根据临床和实验室标准协会(CLSI)指南,通过Kirby-Bauer圆盘扩散法测试抗微生物活性。
    结果:沙门氏菌在狗中的患病率为5.73%(9/157),在猫中为0.0%(0/191)。用ISO方法培养8个(8/9)分离株,用FDA方法培养5个(5/9)分离株。宏观结果表明,沙门氏菌对LAB没有影响。检测到三种不同的血清型,所有分离株的毒力基因均为阳性。抗生素耐药性分析表明,11.1%的分离株为MDR,环丙沙星的耐药性最高。从狗分离物中检测到耐多药S.Virchow和耐碳青霉烯类肠炎S.生肉消费量和沙门氏菌携带量之间存在显着差异(p<0.01)。
    结论:狗可能是沙门氏菌感染的潜在携带者。在健康的狗中而不是在患有腹泻的狗中分离沙门氏菌,这表明应注意无症状携带。人畜共患沙门氏菌分离株中耐药性的出现对公众健康构成了重大威胁。
    BACKGROUND: Although salmonellosis is considered to be a foodborne zoonotic disease, pets can play a significant role in the dissemination of antimicrobial-resistant Salmonella organisms to humans because of close contact with their owners.
    OBJECTIVE: To determine the prevalence, risk factors, virulence factors, serotypes, and antimicrobial resistance profile of Salmonella in pet dogs and cats in Turkey and to assess the public health risk. Furthermore, to perform macroscopic comparison of lactic acid bacteria (LAB) in Salmonella-positive and Salmonella-negative animals.
    METHODS: International Standards Organization (ISO) 6579-1:2017 and Food and Drug Administration (FDA) methods were used to compare the effectiveness of culture methods in the identification of Salmonella in 348 rectal swabs. Positive isolates were serotyped using the slide agglutination method according to the White-Kauffmann-Le Minor scheme and the presence of virulence genes (invA and stn) were evaluated by polymerase chain reaction (PCR). Antimicrobial activity was tested by Kirby-Bauer disk diffusion method according to Clinical and Laboratory Standards Institute (CLSI) guidelines.
    RESULTS: Salmonella prevalence was 5.73% (9/157) in dogs and 0.0% (0/191) in cats. Eight (8/9) isolates were cultured with the ISO method and 5 (5/9) isolates were cultured with the FDA method. Macroscopic results revealed that Salmonella agents had no effect on LAB. Three different serotypes were detected and all isolates were positive for virulence genes. Antibiotic resistance profiling indicated that 11.1% of the isolates were MDR and the highest resistance was found for ciprofloxacin. MDR-resistant S. Virchow and carbapenem-resistant S. Enteritidis were detected from dog isolates. There was a significant difference between raw meat consumption and Salmonella carriage (p < 0.01).
    CONCLUSIONS: Dogs could be potential carriers of Salmonella infection. The isolation of Salmonella in healthy dogs instead of dogs suffering from diarrhoea indicates that attention should be paid to asymptomatic carriage. The emergence of resistance among zoonotic Salmonella isolates poses a significant threat to public health.
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  • 文章类型: Journal Article
    非伤寒沙门氏菌(NTS)通常会导致自限性胃肠炎。然而,老年人(≥65岁)可经历NTS感染更严重的结局.我们以前已经证明减毒鼠伤寒沙门氏菌活疫苗,CVD1926(I77ΔguaBAΔclpPΔpipAΔhtrA),在成年但不是老年小鼠中具有免疫原性。在这里,我们描述了通过删除steD对CVD1926的修改,一种负责宿主免疫逃逸的沙门氏菌效应,我们假设这会增加老年小鼠的免疫原性。
    MelJuso和/或mutuDC细胞感染了鼠伤寒沙门氏菌I77,CVD1926及其各自的steD突变体,并评估MHC-II水平。老年(18月龄)C57BL/6小鼠接受两剂PBS,测定经口CVD1926或CVD1926ΔsteD(109CFU)和FliC特异性CD4+T细胞的数量。最后,老年C57BL/6小鼠接受三剂PBS,经口CVD1926或CVD1926ΔsteD(109CFU),然后用野生型鼠伤寒沙门氏菌SL1344(108CFU)经口攻击。还评估了这些动物的抗体应答。
    MHC-II诱导在用steD突变体处理的细胞中更高,与它们各自的亲本菌株相比。与PBS接种的小鼠相比,CVD1926ΔsteD在Peyer's斑块中引起明显更多的FliC特异性CD4+T细胞。与PBS免疫的小鼠相比,CVD1926的Peyer斑块或脾脏中的FliC特异性CD4T细胞没有显着差异。CVD1926和CVD1926ΔsteD在三个剂量后诱导了相似的血清和粪便抗核心和O多糖抗体滴度。两次免疫后,CVD1926的血清转化器的比例ΔsteD为83%(10/12),而CVD1926为42%(5/12)。与PBS免疫的小鼠相比,用CVD1926ΔsteD免疫的小鼠脾脏中鼠伤寒沙门氏菌计数显着降低,盲肠,和小肠在挑战。相比之下,PBS疫苗接种和CVD1926免疫动物的组织中细菌负荷没有差异.
    这些数据表明steD缺失增强了我们的减毒鼠伤寒沙门氏菌活疫苗的免疫原性。删除免疫逃避基因可能是改善老年人减毒活疫苗免疫原性的潜在策略。
    UNASSIGNED: Non-typhoidal Salmonella (NTS) generally causes self-limiting gastroenteritis. However, older adults (≥65 years) can experience more severe outcomes from NTS infection. We have previously shown that a live attenuated S. Typhimurium vaccine, CVD 1926 (I77 ΔguaBA ΔclpP ΔpipA ΔhtrA), was immunogenic in adult but not aged mice. Here we describe modification of CVD 1926 through deletion of steD, a Salmonella effector responsible for host immune escape, which we hypothesized would increase immunogenicity in aged mice.
    UNASSIGNED: Mel Juso and/or mutuDC cells were infected with S. Typhimurium I77, CVD 1926, and their respective steD mutants, and the MHC-II levels were evaluated. Aged (18-month-old) C57BL/6 mice received two doses of PBS, CVD 1926, or CVD 1926 ΔsteD perorally (109 CFU) and the number of FliC-specific CD4+ T cells were determined. Lastly, aged C57BL/6 mice received three doses of PBS, CVD 1926, or CVD 1926 ΔsteD perorally (109 CFU) and then were challenged perorally with wild-type S. Typhimurium SL1344 (108 CFU). These animals were also evaluated for antibody responses.
    UNASSIGNED: MHC-II induction was higher in cells treated with steD mutants, compared to their respective parental strains. Compared to PBS-vaccinated mice, CVD 1926 ΔsteD elicited significantly more FliC-specific CD4+ T cells in the Peyer\'s Patches. There were no significant differences in FliC-specific CD4+ T cells in the Peyer\'s patches or spleen of CVD 1926- versus PBS-immunized mice. CVD 1926 and CVD 1926 ΔsteD induced similar serum and fecal anti-core and O polysaccharide antibody titers after three doses. After two immunizations, the proportion of seroconverters for CVD 1926 ΔsteD was 83% (10/12) compared to 42% (5/12) for CVD 1926. Compared to PBS-immunized mice, mice immunized with CVD 1926 ΔsteD had significantly lower S. Typhimurium counts in the spleen, cecum, and small intestine upon challenge. In contrast, there were no differences in bacterial loads in the tissues of PBS-vaccinated and CVD 1926-immunized animals.
    UNASSIGNED: These data suggest that the steD deletion enhanced the immunogenicity of our live attenuated S. Typhimurium vaccine. Deletion of immune evasion genes could be a potential strategy to improve the immunogenicity of live attenuated vaccines in older adults.
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  • 文章类型: Journal Article
    沙门氏菌(IIIb)通常从爬行动物中分离出来,而从鸟类和哺乳动物中分离出来的频率较低。然而,它与人类侵袭性感染的分离尚未得到广泛报道。迁徙野鸭是病原体存在和病原体抗生素抗性(AMR)的出色生物指标。我们介绍了从中欧一只野鸭中首次分离出的耐抗生素沙门氏菌肠亚种。具有独特抗原模式58:r:z53的dirizonae,并报告了其全基因组测序,血清测序,和基因分型,这使得能够预测其致病性并与表型AMR进行比较。分离出的菌株与从人类和食物中分离出的S.diarizonae高度相似。检测到24个AMR基因,包括那些编码氨基糖苷的,氟喹诺酮,大环内酯,碳青霉烯,四环素,头孢菌素,硝基咪唑,肽抗生素,和消毒剂/防腐剂抗性。发现了六个沙门氏菌致病性岛(SPI-1,SPI-2,SPI-3,SPI-5,SPI-9和SPI-13)。在SPI-1厘米C63PI中检测到铁转运系统。质粒概况分析显示存在三个。注意到invA和invF基因的序列突变,截短和延长蛋白质,分别。该菌株还包含编码III型分泌系统效应蛋白的基因和在与人类感染相关的Diarizonae中发现的许多毒力因子。本研究旨在阐明肠球菌亚种中的AMR和毒力基因。可能对人类健康造成最严重的威胁。
    Salmonella diarizonae (IIIb) is frequently isolated from reptiles and less frequently from birds and mammals. However, its isolation from invasive human infections has not been widely reported. Migratory mallard ducks are excellent bioindicators of pathogen presence and pathogen antibiotic resistance (AMR). We present the first isolation from a mallard duck in central Europe of the antibiotic-resistant Salmonella enterica subsp. diarizonae with the unique antigenic pattern 58:r:z53 and report its whole-genome sequencing, serosequencing, and genotyping, which enabled the prediction of its pathogenicity and comparison with phenotypic AMR. The isolated strain was highly similar to S. diarizonae isolated from humans and food. Twenty-four AMR genes were detected, including those encoding aminoglycoside, fluoroquinolone, macrolide, carbapenem, tetracycline, cephalosporin, nitroimidazole, peptide antibiotic, and disinfecting agent/antiseptic resistance. Six Salmonella pathogenicity islands were found (SPI-1, SPI-2, SPI-3, SPI-5, SPI-9, and SPI-13). An iron transport system was detected in SPI-1 centisome C63PI. Plasmid profile analyses showed three to be present. Sequence mutations in the invA and invF genes were noted, which truncated and elongated the proteins, respectively. The strain also harbored genes encoding type-III secretion-system effector proteins and many virulence factors found in S. diarizonae associated with human infections. This study aims to elucidate the AMR and virulence genes in S. enterica subsp. diarizonae that may most seriously threaten human health.
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  • 文章类型: Journal Article
    沙门氏菌多重耐药性的出现,引起食源性感染,是一个重要的问题。在沙门氏菌中拥有超过2,600个血清型。,确定每个血清型的具体解决方案至关重要。噬菌体疗法作为替代治疗选择。在这项研究中,从污水中获得vB_SalP_792噬菌体,在13个测试的临床肠链球菌分离株中的8个中形成斑块。透射电子显微镜(TEM)检查显示T7样形态。噬菌体的特点是它的稳定性,生命周期,抗生物膜,和食物来源的裂解能力。噬菌体在整个温度范围内(-20至70°C)保持稳定,pH值(3-11),在氯仿和乙醚中。它还在0.0001至100的MOI范围内表现出裂解活性。生命周期显示,95%的噬菌体在3分钟内附着在其宿主上,接下来是5分钟的潜伏期,导致50PFU/单元的突发大小。vB_SalP_792噬菌体基因组具有长度为37,281bp和GC含量为51%的dsDNA。有42个编码序列(CDS),24个具有推定功能,没有抗性或毒力相关基因。vB_SalP_792噬菌体显着降低了已建立的生物膜以及蛋白中的细菌负荷。因此,vB_SalP_792噬菌体可以作为一种有效的生物防治剂,用于预防食物中的沙门氏菌感染,以及它对肠球菌临床分离株的有效裂解活性,列出了vB_SalP_792噬菌体作为未来针对耐药沙门氏菌感染的体内研究和治疗应用的成功候选者。
    The emergence of multi-drug resistance in Salmonella, causing food-borne infections, is a significant issue. With over 2,600 serovars in in Salmonella sp., it is crucial to identify specific solutions for each serovar. Phage therapy serves as an alternate treatment option. In this study, vB_SalP_792 phage was obtained from sewage, forming plaques in eight out of 13 tested clinical S. enterica isolates. Transmission electron microscopy (TEM) examination revealed a T7-like morphotype. The phage was characterized by its stability, life cycle, antibiofilm, and lytic ability in food sources. The phage remains stable throughout a range of temperatures (-20 to 70°C), pH levels (3-11), and in chloroform and ether. It also exhibited lytic activity within a range of MOIs from 0.0001 to 100. The life cycle revealed that 95% of the phages attached to their host within 3 min, followed by a 5-min latent period, resulting in a 50 PFU/cell burst size. The vB_SalP_792 phage genome has a dsDNA with a length of 37,281 bp and a GC content of 51%. There are 42 coding sequences (CDS), with 24 having putative functions and no resistance or virulence-related genes. The vB_SalP_792 phage significantly reduced the bacterial load in the established biofilms and also in egg whites. Thus, vB_SalP_792 phage can serve as an effective biocontrol agent for preventing Salmonella infections in food, and its potent lytic activity against the clinical isolates of S. enterica, sets out vB_SalP_792 phage as a successful candidate for future in vivo studies and therapeutical application against drug-resistant Salmonella infections.
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