marine drugs

海洋药物
  • 文章类型: Journal Article
    结核病(TB)是由结核分枝杆菌引起的传染性空气传播疾病。自1990年代以来,许多国家通过改善卫生服务和加强监测系统,在降低结核病发病率和相关死亡率方面取得了重大进展。然而,由于耐多药结核病(MDR-TB)的出现,除了广泛耐药结核病(XDR-TB)和TB-HIV共同感染,结核病仍然是世界范围内传染病引起的主要死亡原因之一,特别是在发展中国家和弱势群体。海洋天然产物(MNPs)作为药物成分和先导化合物的来源近年来受到了大量关注,并有望在未来几年在药物开发和生物技术领域提供重要的资源和潜力。这篇综述总结了从2013年到现在显示抗结核活性的169种海洋天然产物及其合成衍生物。包括它们的结构,来源和功能。还包括部分合成信息和结构-活性关系(SAR)。
    Tuberculosis (TB) is an infectious airborne disease caused by Mycobacterium tuberculosis. Since the 1990 s, many countries have made significant progress in reducing the incidence of TB and associated mortality by improving health services and strengthening surveillance systems. Nevertheless, due to the emergence of multidrug-resistant TB (MDR-TB), alongside extensively drug-resistant TB (XDR-TB) and TB-HIV co-infection, TB remains one of the lead causes of death arising from infectious disease worldwide, especially in developing countries and disadvantaged populations. Marine natural products (MNPs) have received a large amount of attention in recent years as a source of pharmaceutical constituents and lead compounds, and are expected to offer significant resources and potential in the fields of drug development and biotechnology in the years to come. This review summarizes 169 marine natural products and their synthetic derivatives displaying anti-TB activity from 2013 to the present, including their structures, sources and functions. Partial synthetic information and structure-activity relationships (SARs) are also included.
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  • 文章类型: Journal Article
    丝状温度敏感突变体Z蛋白(FtsZ),细菌细胞分裂机制的关键角色,成为一个有吸引力的目标,以解决世界各地日益增长的抗生素耐药性所带来的困境。因此在这方面,非常需要具有支架多样性和针对革兰氏阳性和革兰氏阴性病原体的广谱抗菌活性的试剂。在这项研究中,通过Suzuki-Miyaura交叉偶联设计并合成了一类新的海洋衍生fascaplysin衍生物。一些化合物对一组革兰氏阳性(MIC=0.024-6.25μg/mL)和革兰氏阴性(MIC=1.56-12.5μg/mL)细菌表现出有效的杀菌活性,包括耐甲氧西林的金黄色葡萄球菌(MRSA)。它们通过破坏细菌细胞膜的完整性和靶向FtsZ蛋白的双重作用机制发挥其作用。这些化合物刺激了FtsZ单体的聚合和聚合物的捆扎,并稳定了所得的聚合物网络,从而导致FtsZ在细胞分裂中的功能障碍。此外,这些药物表现出可忽略的溶血活性和对哺乳动物细胞的低细胞毒性。对接和分子动力学模拟研究表明,这些抑制剂与FtsZ蛋白的亲水性域间裂隙结合,本研究中获得的见解将有助于开发具有广谱生物活性的潜在药物。
    The filamentous temperature-sensitive mutant Z protein (FtsZ), a key player in bacterial cell division machinery, emerges as an attractive target to tackle the plight posed by the ever growing antibiotic resistance over the world. Therefore in this regard, agents with scaffold diversities and broad-spectrum antibacterial activity against Gram-positive and Gram-negative pathogens are highly needed. In this study, a new class of marine-derived fascaplysin derivatives has been designed and synthesized by Suzuki-Miyaura cross-coupling. Some compounds exhibited potent bactericidal activities against a panel of Gram-positive (MIC = 0.024-6.25 μg/mL) and Gram-negative (MIC = 1.56-12.5 μg/mL) bacteria including methicillin-resistant S. aureus (MRSA). They exerted their effects by dual action mechanism via disrupting the integrity of the bacterial cell membrane and targeting FtsZ protein. These compounds stimulated polymerization of FtsZ monomers and bundling of the polymers, and stabilized the resulting polymer network, thus leading to the dysfunction of FtsZ in cell division. In addition, these agents showed negligible hemolytic activity and low cytotoxicity to mammalian cells. The studies on docking and molecular dynamics simulations suggest that these inhibitors bind to the hydrophilic inter-domain cleft of FtsZ protein and the insights obtained in this study would facilitate the development of potential drugs with broad-spectrum bioactivities.
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  • 文章类型: Journal Article
    Plitidepsin(或脱氢二定蛋白B),一种被批准的抗癌药物,属于环状缩肽的didemnin家族,在海洋被囊动物提取物中发现的数量有限。这里,我们介绍了一种整合微生物和化学合成的新方法,以产生plitidepsin及其类似物。我们筛选了Tistrella菌株文库,以鉴定有效的DedemninB生产者,然后将第二拷贝的didemnin生物合成基因簇引入其基因组中,导致大约75mg/L的didemninB滴度。接下来,我们开发了两种直接的化学策略将DedemninB转化为plitidepsin,其中之一涉及一步合成路线,总收率超过90%。此外,我们合成了13个新的didemnin衍生物和3个didemnin探针,能够研究dedemnin和蛋白质之间的结构-活性关系和相互作用。我们的研究强调了生物合成和化学合成在克服可持续和大规模生产复杂天然产物的挑战方面的协同潜力。
    Plitidepsin (or dehydrodidemnin B), an approved anticancer drug, belongs to the didemnin family of cyclic depsipeptides, which are found in limited quantities in marine tunicate extracts. Herein, we introduce a new approach that integrates microbial and chemical synthesis to generate plitidepsin and its analogues. We screened a Tistrella strain library to identify a potent didemnin B producer, and then introduced a second copy of the didemnin biosynthetic gene cluster into its genome, resulting in a didemnin B titer of approximately 75 mg/L. Next, we developed two straightforward chemical strategies to convert didemnin B into plitidepsin, one of which involved a one-step synthetic route giving over 90 % overall yield. Furthermore, we synthesized 13 new didemnin derivatives and three didemnin probes, enabling research into structure-activity relationships and interactions between didemnin and proteins. Our study highlights the synergistic potential of biosynthesis and chemical synthesis in overcoming the challenge of producing complex natural products sustainably and at scale.
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  • 文章类型: Journal Article
    根据淀粉样蛋白级联假说,铜相关的活性氧(ROS)形成可导致与阿尔茨海默病(AD)相关的神经病理学降解。可以选择性地与铜离子螯合并从由铜离子和淀粉样蛋白-β形成的络合物(Cu-Aβ络合物)捕获铜离子的络合剂可用于减少ROS形成。在这里,我们描述了古洛糖醛酸(GA)的应用,从褐藻的酶水解获得的天然寡糖络合剂,减少与铜相关的ROS形成。UV-vis吸收光谱表明GA与Cu(II)之间的配位。抗坏血酸消耗和香豆素-3-羧酸荧光测定证实了GA在减少含有其他金属离子和Aβ的溶液中ROS形成方面的活力。荧光动力学,DPPH自由基清除和高分辨率X射线光电子能谱结果揭示了GA的还原性。人肝细胞癌(HepG2)细胞的生存力证明了浓度低于320μM的GA的生物相容性。人神经母细胞瘤(SH-SY5Y)细胞的细胞毒性结果验证了GA可以抑制神经元细胞中铜相关的ROS损伤。我们的发现,结合海洋药物的优势,使GA成为减少与AD治疗相关的铜相关ROS形成的有希望的候选物。
    Copper-related reactive oxygen species (ROS) formation can lead to neuropathologic degradation associated with Alzheimer\'s disease (AD) according to amyloid cascade hypothesis. A complexing agent that can selectively chelate with copper ions and capture copper ions from the complex formed by copper ions and amyloid-β (Cu - Aβ complex) may be available in reducing ROS formation. Herein, we described applications of guluronic acid (GA), a natural oligosaccharide complexing agent obtained from enzymatic hydrolysis of brown algae, in reducing copper-related ROS formation. UV-vis absorption spectra demonstrated the coordination between GA and Cu(II). Ascorbic acid consumption and coumarin-3-carboxylic acid fluorescence assays confirmed the viability of GA in reducing ROS formation in solutions containing other metal ions and Aβ. Fluorescence kinetics, DPPH radical clearance and high resolution X - ray photoelectron spectroscopy results revealed the reductivity of GA. Human liver hepatocellular carcinoma (HepG2) cell viability demonstrated the biocompatibility of GA at concentrations lower than 320 μM. Cytotoxic results of human neuroblastoma (SH-SY5Y) cells verified that GA can inhibit copper-related ROS damage in neuronal cells. Our findings, combined with the advantages of marine drugs, make GA a promising candidate in reducing copper-related ROS formation associated with AD therapy.
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  • 文章类型: Journal Article
    来自海洋微生物的天然产物作为用于药物发现的新化合物实体的潜在资源受到了极大的关注。独特的海洋环境为我们带来了一大批具有抗肿瘤等丰富生物功能的含硫天然产物,抗生素,抗炎和抗病毒活性。我们回顾了从海洋微生物中分离出的所有484种含硫天然产物(非硫酸化),其中59.9%是硫醚,29.8%是含噻唑/噻唑啉的化合物,10.3%是亚砜,砜,硫酯和许多其他。进一步讨论了133个化合物的构效关系,行动机制,生物合成,和可吸毒性。这是自1987年1月以来对海洋微生物含硫天然产物进行的第一次系统综述,至2020年12月。
    在线版本包含补充材料,可在10.1007/s42995-021-00101-2获得。
    Natural products derived from marine microorganisms have received great attention as a potential resource of new compound entities for drug discovery. The unique marine environment brings us a large group of sulfur-containing natural products with abundant biological functionality including antitumor, antibiotic, anti-inflammatory and antiviral activities. We reviewed all the 484 sulfur-containing natural products (non-sulfated) isolated from marine microorganisms, of which 59.9% are thioethers, 29.8% are thiazole/thiazoline-containing compounds and 10.3% are sulfoxides, sulfones, thioesters and many others. A selection of 133 compounds was further discussed on their structure-activity relationships, mechanisms of action, biosynthesis, and druggability. This is the first systematic review on sulfur-containing natural products from marine microorganisms conducted from January 1987, when the first one was reported, to December 2020.
    UNASSIGNED: The online version contains supplementary material available at 10.1007/s42995-021-00101-2.
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  • 文章类型: Journal Article
    抗生素耐药性的增加使得开发具有新型抗菌机制的新型抗生素变得尤为迫切。通过破坏丝状温度敏感突变体Z(FtsZ)功能来抑制细菌细胞分裂是一种有效且有前途的方法。在此设计并合成了一系列具有可调疏水性的新型fascaplysin衍生物。体外生物活性评估表明,这些化合物可以抑制所测试的革兰氏阳性菌,包括耐甲氧西林金黄色葡萄球菌(MRSA)(MIC=0.049-25μg/mL),枯草芽孢杆菌(MIC=0.024-12.5μg/mL)和肺炎链球菌(MIC=0.049-50μg/mL)。其中,化合物B3(MIC=0.098μg/mL),B6(MIC=0.098μg/mL),B8(MIC=0.049μg/mL)和B16(MIC=0.098μg/mL)对MRSA显示出最佳的杀菌活性,并且没有明显的引发细菌耐药性和快速杀菌特性的趋势。细菌的细胞表面完整性被fascaplysin衍生物的疏水尾巴显着破坏。进一步的研究表明,这些高活性的两亲化合物对哺乳动物细胞显示出低的溶血活性和细胞毒性。初步机理研究表明,B3、B6、B8和B16是有效的FtsZ抑制剂,可促进FtsZ聚合并抑制FtsZ的GTP酶活性,通过抑制细菌分裂导致细菌细胞死亡。分子对接模拟和构效关系(SAR)研究表明,fascaplysin衍生物疏水性的适当增加和额外的氢键的添加促进了它们与FtsZ蛋白的结合。这些两亲性fascaplysin衍生物可以作为一类新型的FtsZ抑制剂,这不仅为含有该骨架的化合物的应用提供了新的前景,也为新抗生素的发现提供了新思路。
    The increase in antibiotic resistance has made it particularly urgent to develop new antibiotics with novel antibacterial mechanisms. Inhibition of bacterial cell division by disrupting filamentous temperature-sensitive mutant Z (FtsZ) function is an effective and promising approach. A series of novel fascaplysin derivatives with tunable hydrophobicity were designed and synthesized here. The in vitro bioactivity assessment revealed that these compounds could inhibit the tested Gram-positive bacteria including methicillin-resistant S. aureus (MRSA) (MIC = 0.049-25 μg/mL), B. subtilis (MIC = 0.024-12.5 μg/mL) and S. pneumoniae (MIC = 0.049-50 μg/mL). Among them, compounds B3 (MIC = 0.098 μg/mL), B6 (MIC = 0.098 μg/mL), B8 (MIC = 0.049 μg/mL) and B16 (MIC = 0.098 μg/mL) showed the best bactericidal activities against MRSA and no significant tendency to trigger bacterial resistance as well as rapid bactericidal properties. The cell surface integrity of bacteria was significantly disrupted by hydrophobic tails of fascaplysin derivatives. Further studies revealed that these highly active amphiphilic compounds showed low hemolytic activity and cytotoxicity to mammalian cells. Preliminary mechanistic exploration suggests that B3, B6, B8 and B16 are potent FtsZ inhibitors to promote FtsZ polymerization and inhibit GTPase activity of FtsZ, leading to the death of bacterial cells by inhibiting bacterial division. Molecular docking simulations and structure-activity relationship (SAR) study reveal that appropriate increase in the hydrophobicity of fascaplysin derivatives and the addition of additional hydrogen bonds facilitated their binding to FtsZ proteins. These amphiphilic fascaplysin derivatives could serve as a novel class of FtsZ inhibitors, which not only gives new prospects for the application of compounds containing this skeleton but also provides new ideas for the discovery of new antibiotics.
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  • 文章类型: Journal Article
    海洋天然产物是一个有眼光的领域,可以寻找未来一代的药物来治疗一系列疾病。同时,癌症在世界各地变得越来越普遍,死亡的可能性正在上升。手术,辐射,化疗是全世界癌症治疗的支柱,但是它们广泛的副作用限制了它们的疗效。寻求低毒性的海洋药物来预防和治疗癌症是目前研究人员的研究重点之一。褐藻多糖,藻类硫酸多糖,是一种有效的癌症治疗先导候选药物,这意味着需要更多的研究。褐藻糖胶是一种多才多艺的,无毒的海洋来源的杂多糖,由于其有益的生物学特性和安全性而备受关注。岩藻依聚糖已被证明具有多种常规生物活性,如抗病毒,抗氧化剂,和免疫调节特性,最近还发现了针对多种恶性肿瘤的抗癌活性。岩藻多糖通过促进细胞周期停滞和凋亡抑制肿瘤发生,阻断转移和血管生成,和调节生理信号分子。这篇综述汇编了分子和细胞方面,岩藻依聚糖作为天然海洋抗癌剂的免疫调节和抗癌作用。来自Eckloniacava的特定岩藻依聚糖和膜状多糖,海带,岩藻,黄芪,夜蛾,本文讨论了脆弱的Codium作为潜在的抗癌海洋药物。
    Marine natural products are a discerning arena to search for the future generation of medications to treat a spectrum of ailments. Meanwhile, cancer is becoming more ubiquitous over the world, and the likelihood of dying from it is rising. Surgery, radiation, and chemotherapy are the mainstays of cancer treatment worldwide, but their extensive side effects limit their curative effect. The quest for low-toxicity marine drugs to prevent and treat cancer is one of the current research priorities of researchers. Fucoidan, an algal sulfated polysaccharide, is a potent therapeutic lead candidate against cancer, signifying that far more research is needed. Fucoidan is a versatile, nontoxic marine-origin heteropolysaccharide that has received much attention due to its beneficial biological properties and safety. Fucoidan has been demonstrated to exhibit a variety of conventional bioactivities, such as antiviral, antioxidant, and immune-modulatory characteristics, and anticancer activity against a wide range of malignancies has also recently been discovered. Fucoidan inhibits tumorigenesis by prompting cell cycle arrest and apoptosis, blocking metastasis and angiogenesis, and modulating physiological signaling molecules. This review compiles the molecular and cellular aspects, immunomodulatory and anticancer actions of fucoidan as a natural marine anticancer agent. Specific fucoidan and membranaceous polysaccharides from Ecklonia cava, Laminaria japonica, Fucus vesiculosus, Astragalus, Ascophyllum nodosum, Codium fragile serving as potential anticancer marine drugs are discussed in this review.
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  • 文章类型: Journal Article
    海洋天然产物是其他植物天然产物中有效和有前途的药物来源,动物,和微生物起源。迄今为止,来自海洋来源的20种药物正在临床使用。大多数批准的海洋化合物是抗肿瘤的,但有些也用于慢性神经性疼痛,肝素过量,作为半抗原和疫苗载体,以及在饮食中补充omega-3脂肪酸。海洋药物具有不同的结构特征和作用机制。在过去的几十年中,批准用于临床的海洋药物的数量已大大增加,这可能归因于世界各地实验室对海洋化合物的研究不断增加。在目前的手稿中,我们全面研究了所有成功用于临床的海洋药物。研究人员和临床医生希望发现更多的药物,作为大量的海洋天然化合物正在研究的临床前和临床研究。
    Marine natural products are potent and promising sources of drugs among other natural products of plant, animal, and microbial origin. To date, 20 drugs from marine sources are in clinical use. Most approved marine compounds are antineoplastic, but some are also used for chronic neuropathic pain, for heparin overdosage, as haptens and vaccine carriers, and for omega-3 fatty-acid supplementation in the diet. Marine drugs have diverse structural characteristics and mechanisms of action. A considerable increase in the number of marine drugs approved for clinical use has occurred in the past few decades, which may be attributed to increasing research on marine compounds in laboratories across the world. In the present manuscript, we comprehensively studied all marine drugs that have been successfully used in the clinic. Researchers and clinicians are hopeful to discover many more drugs, as a large number of marine natural compounds are being investigated in preclinical and clinical studies.
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  • 文章类型: Journal Article
    耐甲氧西林金黄色葡萄球菌(MRSA)被认为是最危险的临床病原体之一。MRSA的生物膜形成能力也是耐药的主要原因。因此,迫切需要开发新的抗菌/抗生物膜药物。具有独特的阳离子五环共面主链的Fascaplysin正在成为潜在的抗菌化合物。在这项研究中,旨在开发新的和更有效的药物,合成了一系列fascaplysin衍生物及其相应的β-咔啉前体。然后首次研究了它们的抗菌/抗生物膜活性和抗MRSA的机制。结果表明,大多数fascaplysins而不是β-咔啉前体对MRSAATCC43300表现出优异的抗菌活性,表明阳离子五环共面主链在抗菌活性中起着重要作用。其中,14和18是最有效的化合物,MIC值为0.098μg/ml(比万古霉素低10倍),和18具有最低的毒性。随后的机制探索表明,18具有相对较强的破坏细菌细胞壁和细胞膜的能力,对细菌基因组DNA有更高的结合亲和力。分子对接研究表明,除了阳离子五环共平面骨架的关键作用外,在fascaplysin的9-位引入N-芳基酰胺通过额外的π-π堆积和萘基的氢键促进了化合物18和DNA的结合。此外,fascaplysins可以抑制MRSA体外生物膜形成和体内细菌感染。这些结果说明fascaplysin衍生物18是一种强而安全的多靶点抗菌剂,这使其成为治疗MRSA及其生物膜感染的有吸引力的候选药物。
    Methicillin-resistant Staphylococcus aureus (MRSA) is considered as one of the most dangerous clinical pathogens. Biofilms forming ability of MRSA is also a major cause of drug resistance. Hence, it is in urgent need to develop novel antibacterial/antibiofilm drugs. Fascaplysin with a unique cationic five-ring coplanar backbone is emerging as a potential antibacterial compound. In this study, aiming at developing novel and more effective agents, a series of fascaplysin derivatives and their corresponding β-carboline precursors have been synthesized. Then their antibacterial/antibiofilm activity and mechanisms against MRSA were investigated for the first time. The results showed that most fascaplysins rather than β-carboline precursors exhibit superior antimicrobial activity against MRSA ATCC43300, demonstrating the important role of cationic five-ring coplanar backbone playing in antibacterial activity. Among them, 14 and 18 are the most potent compounds with MIC value of 0.098 μg/ml (10-fold lower than vancomycin), and 18 featuring the lowest toxicity. Subsequent mechanisms exploration indicates that 18 has relatively stronger ability to destroy bacterial cell wall and membrane, higher binding affinity to bacterial genomic DNA. Molecular docking study revealed that besides the key role of cationic five-ring coplanar backbone, introduction of N-aryl amide at 9-position of fascaplysin promoted the combination of compound 18 and DNA via additional π-π stacking and hydrogen bonding of the naphthyl group. Moreover, fascaplysins could inhibit MRSA biofilm formation in vitro and bacterial infection in vivo. All these results illustrate that fascaplysin derivative 18 is a strong and safe multi-target antibacterial agent, which makes it an attractive candidate for the treatment of MRSA and its biofilm infections.
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  • 文章类型: Journal Article
    Vidarabine (ARA) was one of the earliest marine-related compounds to be used clinically for antiviral therapy, however, its fast metabolism is the main defect of this drug. To overcome this, we designed and synthesized a group of phosphamide-modified ARA compounds using ProTide technology. With a phosphamide modification, these compounds could become the substrate of specific phospholipase enzymes expressed in the liver. Among all 16 synthesized compounds, most showed stronger activity against herpes simplex virus type 1 (HSV-1) than ARA (EC50 of approximately 10 μM). The top three compounds were compound 2 (EC50 = 0.52 ± 0.04 μM), compound 6 (EC50 = 1.05 ± 0.09 μM) and compound 15 (EC50 = 1.18 ± 0.08 μM) (about 2 times higher than Sp type compound 2). This study provides evidence for use of the phosphamide modification, which could give ARA higher activity and liver cell targeting.
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