marine drugs

海洋药物
  • 文章类型: Journal Article
    抗生素耐药性的增加使得开发具有新型抗菌机制的新型抗生素变得尤为迫切。通过破坏丝状温度敏感突变体Z(FtsZ)功能来抑制细菌细胞分裂是一种有效且有前途的方法。在此设计并合成了一系列具有可调疏水性的新型fascaplysin衍生物。体外生物活性评估表明,这些化合物可以抑制所测试的革兰氏阳性菌,包括耐甲氧西林金黄色葡萄球菌(MRSA)(MIC=0.049-25μg/mL),枯草芽孢杆菌(MIC=0.024-12.5μg/mL)和肺炎链球菌(MIC=0.049-50μg/mL)。其中,化合物B3(MIC=0.098μg/mL),B6(MIC=0.098μg/mL),B8(MIC=0.049μg/mL)和B16(MIC=0.098μg/mL)对MRSA显示出最佳的杀菌活性,并且没有明显的引发细菌耐药性和快速杀菌特性的趋势。细菌的细胞表面完整性被fascaplysin衍生物的疏水尾巴显着破坏。进一步的研究表明,这些高活性的两亲化合物对哺乳动物细胞显示出低的溶血活性和细胞毒性。初步机理研究表明,B3、B6、B8和B16是有效的FtsZ抑制剂,可促进FtsZ聚合并抑制FtsZ的GTP酶活性,通过抑制细菌分裂导致细菌细胞死亡。分子对接模拟和构效关系(SAR)研究表明,fascaplysin衍生物疏水性的适当增加和额外的氢键的添加促进了它们与FtsZ蛋白的结合。这些两亲性fascaplysin衍生物可以作为一类新型的FtsZ抑制剂,这不仅为含有该骨架的化合物的应用提供了新的前景,也为新抗生素的发现提供了新思路。
    The increase in antibiotic resistance has made it particularly urgent to develop new antibiotics with novel antibacterial mechanisms. Inhibition of bacterial cell division by disrupting filamentous temperature-sensitive mutant Z (FtsZ) function is an effective and promising approach. A series of novel fascaplysin derivatives with tunable hydrophobicity were designed and synthesized here. The in vitro bioactivity assessment revealed that these compounds could inhibit the tested Gram-positive bacteria including methicillin-resistant S. aureus (MRSA) (MIC = 0.049-25 μg/mL), B. subtilis (MIC = 0.024-12.5 μg/mL) and S. pneumoniae (MIC = 0.049-50 μg/mL). Among them, compounds B3 (MIC = 0.098 μg/mL), B6 (MIC = 0.098 μg/mL), B8 (MIC = 0.049 μg/mL) and B16 (MIC = 0.098 μg/mL) showed the best bactericidal activities against MRSA and no significant tendency to trigger bacterial resistance as well as rapid bactericidal properties. The cell surface integrity of bacteria was significantly disrupted by hydrophobic tails of fascaplysin derivatives. Further studies revealed that these highly active amphiphilic compounds showed low hemolytic activity and cytotoxicity to mammalian cells. Preliminary mechanistic exploration suggests that B3, B6, B8 and B16 are potent FtsZ inhibitors to promote FtsZ polymerization and inhibit GTPase activity of FtsZ, leading to the death of bacterial cells by inhibiting bacterial division. Molecular docking simulations and structure-activity relationship (SAR) study reveal that appropriate increase in the hydrophobicity of fascaplysin derivatives and the addition of additional hydrogen bonds facilitated their binding to FtsZ proteins. These amphiphilic fascaplysin derivatives could serve as a novel class of FtsZ inhibitors, which not only gives new prospects for the application of compounds containing this skeleton but also provides new ideas for the discovery of new antibiotics.
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  • 文章类型: Journal Article
    In the last decades Blue Growth policy in european and non-european countries produced a great impulse in applied marine sciences, comprehending the research of new bioactive molecules in marine organisms. These organisms are a great source of natural compounds with unique features resulting from the huge variability of marine habitats and species living in them. Most of the marine compounds in use and in clinical trials are drugs for cancer therapy and many of them are conjugated to antibody to form antibody-drug conjugates (ADCs). Severe pain, viral infections, hypertriglyceridemia, obesity, Alzheimer\'s and other CNS diseases are further target conditions for these pharmaceuticals. This review summarizes the state-of-the-art marine drugs focusing on the most successful results in the fast expanding field of marine pharmacology.
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  • 文章类型: Journal Article
    急性呼吸综合征冠状病毒2(SARS-CoV-2)是一种单链RNA(ssRNA)病毒,负责严重急性呼吸系统疾病(COVID-19)。大量天然化合物正在试验筛选化合物,对病毒感染具有潜在的抑制作用。考虑到海洋化合物在抗病毒活性中的重要性,我们调查了一些海洋天然产物靶向SARS-CoV-2主要蛋白酶(Mpro)(PDBID6MO3)的效力。从蛋白质数据库和PubChem的海洋化合物中检索了apo形式的Mpro的晶体结构。准备这些结构用于对接,并对具有良好对接分数的复合物进行分子动力学(MD)模拟,时间为100ns。为了测量稳定性,灵活性,目标和化合物之间的平均距离,均方根偏差(RMSD),均方根波动(RMSF),并计算了距离矩阵。在五种海洋化合物中,C-1(PubChemCID11170714)表现出良好的活性,与活性位点和周围的残基相互作用,形成许多氢和疏水相互作用。C-1还获得了稳定的动态行为,化合物和目标之间的平均距离保持不变。总之,海洋天然化合物可用作SARS-CoV-2的潜在抑制剂,以更好地控制COVID-19。
    Sever acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a single-stranded RNA (ssRNA) virus, responsible for severe acute respiratory disease (COVID-19). A large number of natural compounds are under trial for screening compounds, possessing potential inhibitory effect against the viral infection. Keeping in view the importance of marine compounds in antiviral activity, we investigated the potency of some marine natural products to target SARS-CoV-2 main protease (Mpro) (PDB ID 6MO3). The crystallographic structure of Mpro in an apo form was retrieved from Protein Data Bank and marine compounds from PubChem. These structures were prepared for docking and the complex with good docking score was subjected to molecular dynamic (MD) simulations for a period of 100 ns. To measure the stability, flexibility, and average distance between the target and compounds, root mean square deviations (RMSD), root mean square fluctuation (RMSF), and the distance matrix were calculated. Among five marine compounds, C-1 (PubChem CID 11170714) exhibited good activity, interacting with the active site and surrounding residues, forming many hydrogen and hydrophobic interactions. The C-1 also attained a stable dynamic behavior, and the average distance between compound and target remains constant. In conclusion, marine natural compounds may be used as a potential inhibitor against SARS-CoV-2 for better management of COVID-19.
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  • 文章类型: Journal Article
    我们利用Ischia岛CastelloAragonese的火山CO2喷口作为天然实验室,研究降低pH/升高CO2对肉质褐藻SargassumvulgareC.Agardh提取物生物活性的影响。我们分析了碳水化合物的含量,抗氧化能力,抗菌,抗真菌药,抗原生动物,在酸化部位生长的藻类的抗癌特性和抗诱变潜力(pH〜6.7)以及在附近控制部位LaccoAmeno生长的藻类的抗癌特性(pH〜8.1)。本研究的结果表明,酸化部位的藻类种群中多糖岩藻依聚糖和藻酸盐的水平较高。总的来说,来自酸化部位的藻类种群的提取物显示出更高的抗氧化能力,抗脂质过氧化,抗菌,抗真菌药,抗原生动物,与对照人群相比,抗癌活性和抗诱变潜力。酸化群体中增加的生物活性可能是由于藻类和/或相关微生物群落的生物活性化合物水平升高。在这个快照研究中,我们进行了生物活性测定,但未对推测的生物活性化合物的化学性质和来源进行表征.然而,在酸化海洋中观察到的S.vulgare药用特性的改善为未来的海洋药物发现提供了有希望的基础。
    We utilized volcanic CO2 vents at Castello Aragonese off Ischia Island as a natural laboratory to investigate the effect of lowered pH/elevated CO2 on the bioactivities of extracts from fleshy brown algae Sargassum vulgare C. Agardh. We analysed the carbohydrate levels, antioxidant capacity, antibacterial, antifungal, antiprotozoal, anticancer properties and antimutagenic potential of the algae growing at the acidified site (pH ∼ 6.7) and those of algae growing at the nearby control site Lacco Ameno (pH∼8.1). The results of the present study show that the levels of polysaccharides fucoidan and alginate were higher in the algal population at acidified site. In general, extracts for the algal population from the acidified site showed a higher antioxidant capacity, antilipidperoxidation, antibacterial, antifungal, antiprotozoal, anticancer activities and antimutagenic potential compared to the control population. The increased bioactivity in acidified population could be due to elevated levels of bioactive compounds of algae and/or associated microbial communities. In this snapshot study, we performed bioactivity assays but did not characterize the chemistry and source of presumptive bioactive compounds. Nevertheless, the observed improvement in the medicinal properties of S. vulgare in the acidified oceans provides a promising basis for future marine drug discovery.
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