cytogenetics

细胞遗传学
  • 文章类型: Journal Article
    Astyanax是新热带地区最可疑的鱼群之一,有许多神秘的物种,这代表了通过传统分类学方法进行正确识别的挑战。Psalidodon是最近复活的属,以前属于Astyanax,特别是那些具有大量染色体变异的S.a.scabripinnis和fasciatus复合体。在本研究中,线粒体基因细胞色素C氧化酶亚基1(COI),线粒体ATP合酶6和8(ATP酶6/8),和NADH脱氢酶亚基2(ND2)与染色体数据结合使用,以表征伊瓦伊盆地(巴拉那盆地)河流和溪流中的Astyanax和Psalidodon的分子和细胞遗传学种群。结果证明了分子和细胞遗传学技术的综合使用的有效性,随着采样地点至少有三种物种的确认:A.lacustris,P.paranae,和P.fasciatus,显示了种群间和种群内的核型变异。此外,在伊瓦伊流域和整个巴拉那河流域内,可以观察到这些物种的广泛单倍型变异。数据表明所分析物种之间隐藏的多样性,丰富了小河小溪的鱼类知识,并为这些地区的未来保护项目做出贡献。
    Astyanax is one of the most specious fish groups in the Neotropical region, with many cryptic species, which represents a challenge for correct identification through traditional taxonomic methods. Psalidodon is a recently resurrected genus group of species previously belonging to Astyanax, specifically those with extensive chromosomal variation of the A. scabripinnis and fasciatus complexes. In the present study, the mitochondrial genes cytochrome c oxidase subunit 1 (COI), mitochondrial ATP synthase 6 and 8 (ATPase 6/8), and NADH dehydrogenase subunit 2 (ND2) were used in conjunction with chromosomal data to characterize molecularly and cytogenetically populations of Astyanax and Psalidodon from rivers and streams of the Ivaí River Basin (Paraná Basin). The results demonstrated the effectiveness of the integrative use of molecular and cytogenetic techniques, with the confirmation of at least three species for the sampled sites: A. lacustris, P. paranae, and P. fasciatus, which showed inter- and intrapopulation karyotype variations. In addition, extensive haplotypic variation can be observed for these species within the Ivaí River Basin and throughout the Paraná River Basin. The data demonstrate a hidden diversity among the species analyzed, enrich the ichthyofaunistic knowledge of small rivers and streams, and contribute to future conservation projects in these areas.
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  • 文章类型: Journal Article
    性染色体在许多具有不同性别的植物物种中已经进化。当前的植物研究正在从检查性染色体的结构转向探索其功能方面。新的研究正在逐步揭示负责塑造植物中不同性别的特定遗传和表观遗传机制。虽然分子生物学和基因组学的基本方法通常用于性染色体的分析,通常需要修改经典程序,不仅是为了简化和加快分析,有时也是为了使它们成为可能。在这次审查中,我们演示了如何,在结构和功能遗传学层面,细胞遗传学,和生物信息学,必须调整已建立的性染色体分析程序。
    Sex chromosomes have evolved in many plant species with separate sexes. Current plant research is shifting from examining the structure of sex chromosomes to exploring their functional aspects. New studies are progressively unveiling the specific genetic and epigenetic mechanisms responsible for shaping distinct sexes in plants. While the fundamental methods of molecular biology and genomics are generally employed for the analysis of sex chromosomes, it is often necessary to modify classical procedures not only to simplify and expedite analyses but sometimes to make them possible at all. In this review, we demonstrate how, at the level of structural and functional genetics, cytogenetics, and bioinformatics, it is essential to adapt established procedures for sex chromosome analysis.
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  • 文章类型: Journal Article
    长期暴露于电离辐射的个体的剂量测定和暴露控制是重要且复杂的问题。评估可以通过评估个人适应和放射敏感性来优化,但是单个模型不可能考虑所有相关参数。我们的目标是开发用于计算长期暴露于电离辐射的人的剂量的方法,考虑到他们的放射敏感性.根据血液样本的离体辐射,建立剂量-效应模型,剂量范围为0.01-2.0和0.01-0.4Gy,使用不同的细胞遗传学标准。低剂量的“双中心染色体和环”的频率太低,没有预测价值。受试者对辐射的不同反应使得可以根据他们的辐射敏感性对他们进行分类,并为辐射敏感生成单独的剂量效应曲线,平均,和耐辐射个体,减少回顾性剂量测定中的误差。
    The dosimetry and control of exposure for individuals chronically exposed to ionizing radiation are important and complex issues. Assessment may be optimized by evaluating individual adaptation and radiosensitivity, but it is not possible for a single model to account for all relevant parameters. Our goal was to develop approaches for the calculation of doses for persons chronically exposed to ionizing radiation, taking their radiosensitivities into consideration. On the basis of ex vivo radiation of blood samples, dose-effect models were constructed for dose ranges 0.01-2.0 and 0.01-0.4 Gy, using different cytogenetic criteria. The frequencies of \"dicentric chromosomes and rings\" at low doses are too low to have predictive value. The different responses of subjects to radiation made it possible to categorize them according to their radiosensitivities and to generate separate dose-effect curves for radiosensitive, average, and radioresistant individuals, reducing the amount of error in retrospective dosimetry.
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  • 文章类型: Journal Article
    由于新的治疗方法的出现,多发性骨髓瘤的总体结果有所改善。但具有某些因素的复发/难治性多发性骨髓瘤患者仍面临治疗挑战.这些具有挑战性的特征包括高风险的细胞遗传学,肾功能损害,患者特征,如年龄和虚弱,和髓外疾病。先前的难治性状态和先前的线的数量进一步增加了这些患者的治疗的复杂性。虽然有较新的治疗方案,并通过亚组分析提示了这些患者人群的疗效,试验定义和截止值的差异使得有意义的比较变得困难.这篇综述旨在检查高危细胞遗传学患者的可用临床试验数据。肾功能损害,年龄和虚弱和髓外疾病。
    Overall outcomes for multiple myeloma have improved due to the availability of new therapies, but patients with relapsed/refractory multiple myeloma harbouring certain factors continue to pose a therapeutic challenge. These challenging features include high-risk cytogenetics, renal impairment, patient characteristics such as age and frailty, and extramedullary disease. Prior refractory status and number of prior lines add further complexity to the treatment of these patients. While newer regimens are available and have suggested efficacy in these patient populations through subgroup analyses, differences in trial definitions and cut-offs make meaningful comparisons difficult. This review aims to examine the available clinical trial data for patients with high-risk cytogenetics, renal impairment, age and frailty and extramedullary disease.
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  • 文章类型: Journal Article
    背景:染色体异常对人类发病率和死亡率有显著影响,导致各种病理。这项研究旨在评估瓦加杜古疑似遗传性疾病患者染色体异常的患病率,布基纳法索。
    结果:一项描述性横断面研究于2018年1月1日至2021年7月16日进行,涉及来自瓦加杜古不同大学医院的患者。在圣卡米尔·德瓦加杜古医院(HOSCO)收集血液样本,并送往法国的Cerba实验室进行细胞遗传学分析。共有61例疑似遗传性疾病患者接受细胞遗传学检查。患者的平均年龄为26.81岁±18.92,范围为1个月至68岁。在案件中,37例(60.65%)出现染色体异常。结构异常最普遍(78.38%),而数量异常占病例的21.62%。59.45%的病例检出慢性粒细胞白血病,其次是游离同质21三体(18.91%)和性倒置(8.10%)。此外,发现Turner综合征和Klinefelter综合征各1例.
    结论:这项研究揭示了染色体异常的高频率,结构异常占主导地位,在瓦加杜古疑似遗传疾病的患者中。研究结果强调了该地区遗传评估和咨询服务的重要性,特别是常染色体异常。
    BACKGROUND: Chromosomal abnormalities contribute significantly to human morbidity and mortality, leading to various pathologies. This study aimed to assess the prevalence of chromosomal abnormalities among patients suspected of genetic disorders in Ouagadougou, Burkina Faso.
    RESULTS: A descriptive cross-sectional study was conducted from January 1, 2018, to July 16, 2021, involving patients from different university hospitals in Ouagadougou. Blood samples were collected at Hôpital Saint Camille de Ouagadougou (HOSCO) and sent to the Cerba laboratory in France for cytogenetic analysis. A total of 61 cases with suspected genetic disorders were referred for cytogenetic examination. The average age of the patients was 26.81 years ± 18.92, ranging from 1 month to 68 years. Among the cases, 37 (60.65%) exhibited chromosomal abnormalities. Structural abnormalities were the most prevalent (78.38%), while number anomalies accounted for 21.62% of the cases. Chronic myeloid leukemia was detected in 59.45% of cases, followed by free and homogeneous trisomy 21 (18.91%) and sexual inversion (8.10%). Additionally, one case each of Turner syndrome and Klinefelter syndrome were identified.
    CONCLUSIONS: This this study revealed a high frequency of chromosomal abnormalities, with a predominance of structural abnormalities, among patients suspected of genetic disorders in Ouagadougou. The findings emphasize the significance of genetic evaluation and counseling services in the region, particularly for autosomal abnormalities.
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  • 文章类型: Journal Article
    目的:慢性淋巴细胞白血病(CLL)是一种高度异质性的血液病。CLL患者的遗传分层具有重要的预后和治疗价值-主要是免疫球蛋白重链可变区基因(IGHV)突变状态和细胞遗传学异常的存在。黎巴嫩CLL的遗传学在文献中几乎没有描述。患者和方法:在这项工作中,我们研究了312名黎巴嫩CLL患者的遗传生物标志物。结果:突出的IGHV基因是IGHV4-34、IGHV1-69和IGHV3-30;CLL#1和#5呈现主要亚群。在将我们的数据与以前发布的数据进行比较时,突出了一些相似性和主要差异。结论:IGHV等位基因在我们系列中的分布与先前描述的分布不同,提示抗原选择和区域变量参与CLL发病机制。
    Aim: Chronic lymphocytic leukemia (CLL) is a highly heterogenous hemopathy. Genetic stratification of CLL patients has important prognostic and therapeutic values - mainly immunoglobulin heavy chain variable region gene (IGHV) mutational status and the presence of cytogenetic abnormalities. The genetics of CLL in Lebanon is scarcely described in the literature. Patients & methods: In this work, we studied the genetic biomarkers of 312 Lebanese CLL patients. Results: Prominent IGHV genes were IGHV4-34, IGHV1-69 and IGHV3-30; and CLL #1 and #5 presented major subsets. Some similarities as well as major differences were highlighted when comparing our data with previously published data. Conclusion: The distribution of IGHV alleles in our series differed from previously described distributions, suggesting involvement of antigenic selection and regional variables in CLL pathogenesis.
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  • 文章类型: Journal Article
    浆细胞白血病(PCL)是一种罕见的侵袭性浆细胞疾病,表现出比多发性骨髓瘤更不利的预后。PCL分为pPCL和sPCL。最近,IMWG推荐了新的PCL定义标准,这需要在外周血涂片中存在≥5%的循环浆细胞。由于发病率低,对pPCL和sPCL的研究有限。
    我们进行了一项回顾性研究,并分析了pPCL和sPCL患者的临床和细胞遗传学数据。通过Kaplan-Meier方法评估总生存期(OS)和无进展生存期(PFS),和生存分布使用对数秩检验进行比较。
    这是一个由23名pPCL和9名sPCL患者组成的小队列。值得注意的是,sPCL患者的髓外浸润发生率较高,骨髓浆细胞百分比较高(分别为p=0.015和0.025)。尽管两组在OS和PFS上没有发现显著差异,出现了一种趋势,表明pPCL患者具有优越的生存结局,具有较高的1年累计PFS率(38.3%与13.3%)和较低的早期死亡率(3个月时的死亡率:15%vs.33%)。我们还表明,携带t(11;14)的pPCL患者可能比其他细胞遗传学异常的个体有更长的中位生存时间。但由于样本量小,这没有得到证实。
    根据新的诊断标准,我们的研究揭示了pPCL和sPCL患者的临床和细胞遗传学特征。研究结果表明,pPCL的预后通常比sPCL更好,并且t(11;14)易位可能是pPCL的有利预后因素。值得注意的是,我们的研究样本量有限,这可能会导致偏见。我们希望精心设计的研究能够提供更多的结果。
    UNASSIGNED: Plasma cell leukemia (PCL) is a rare and aggressive plasma cell disorder, exhibiting a more unfavorable prognosis than multiple myeloma. PCL is classified into pPCL and sPCL. Recently, the IMWG has recommended new PCL definition criteria, which require the presence of ≥5% circulating plasma cells in peripheral blood smears. Due to its low incidence, research on pPCL and sPCL is limited.
    UNASSIGNED: We conducted a retrospective study and analyzed clinical and cytogenetic data of pPCL and sPCL patients. Overall survival (OS) and progression-free survival (PFS) were assessed by the Kaplan-Meier method, and survival distributions were compared using the log-rank test.
    UNASSIGNED: This is a small cohort comprising 23 pPCL and 9 sPCL patients. Notably, sPCL patients showed a higher incidence of extramedullary infiltration and a higher percentage of bone marrow plasma cells (p = 0.015 and 0.025, respectively). Although no significant difference was found between the two groups in OS and PFS, a trend emerged suggesting a superior survival outcome for pPCL patients, with a higher cumulative 1-year PFS rate (38.3% vs. 13.3%) and a lower early mortality rate (mortality rate at 3 months: 15% vs. 33%). We also suggested that pPCL patients carrying t(11;14) may have a longer median survival time than individuals with other cytogenetic abnormalities, but this was not confirmed due to the small sample size.
    UNASSIGNED: Our study revealed clinical and cytogenetic features of pPCL and sPCL patients according to the new diagnostic criteria. The findings suggested a generally better prognosis for pPCL than sPCL and the likelihood of t(11;14) translocation acting as a favorable prognostic factor in pPCL. It is important to note that our study had a limited sample size, which may lead to bias. We hope well-designed studies can be conducted to provide more results.
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  • 文章类型: Journal Article
    属间和种间杂交已用于蝴蝶兰的育种,以在物种之间转移所需的性状,产生具有改进大小的新表型,颜色,形式,和承载花朵的能力。这些特性通常会得到增强;然而,这些杂种中有许多是三倍体,不育性降低或完全不育,例如,蝴蝶兰皇后啤酒\'Mantefon\',亚洲重要的新颖性品种,尤其是在中国,Japan,和大韩民国。尽管对用于装饰目的的作物的需求不断增加,对它的细胞遗传学知之甚少,这对繁殖至关重要,因此,作物改良。在这项研究中,使用荧光原位杂交进行核型分析,减数分裂染色体行为分析,花粉染色,并进行了体外活力萌发试验,从细胞遗传学的角度了解蝴蝶兰皇后啤酒“Mantefon”杂种不育和花粉异常的原因。活力测试显示花粉不育在所有花发育阶段,通过没有花粉管生长证实。在花粉母细胞(PMC)中观察到异常的染色体行为,经常形成单价,染色体桥,在整个减数分裂过程中落后。PMC也不规则地划分为具有不同数量的微核的零星,这可能是该品种花粉不育的原因。总之,细胞遗传学分析提供了有关蝴蝶兰皇后啤酒\'Mantefon\'的花粉发育及其不育原因的见解。
    Intergeneric and interspecific hybridization has been employed for the breeding of Phalaenopsis to transfer desirable traits between species, producing novel phenotypes with improved size, color, form, and flower-bearing ability. These characteristics are often enhanced; however, many of these hybrids are triploids and have reduced or complete sterility, for example, Phalaenopsis Queen Beer \'Mantefon\', an important novelty-type cultivar in Asia, particularly in China, Japan, and Republic of Korea. Despite the increasing demand for the crop for ornamental purposes, little is known about its cytogenetics, which is essential for breeding and, consequently, crop improvement. In this study, karyotyping using fluorescence in situ hybridization, meiotic chromosome behavior analysis, pollen staining, and in vitro viability germination tests were performed to understand the cause of hybrid sterility and pollen abnormality in Phalaenopsis Queen Beer \'Mantefon\' from a cytogenetic perspective. Viability tests revealed pollen infertility at all flower developmental stages, confirmed by the absence of pollen tube growth. Aberrant chromosomal behavior was observed in pollen mother cells (PMCs), frequently forming univalents, chromosomal bridges, and laggards during the entire meiotic process. PMCs were also divided irregularly into sporads with varying numbers of micronuclei, which may be responsible for pollen sterility in this cultivar. Altogether, the cytogenetic analyses provided insights into the pollen development of Phalaenopsis Queen Beer \'Mantefon\' and the conceivable causes of its infertility.
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  • 文章类型: Journal Article
    染色体异常在血液病的诊断和预后中起重要作用。
    本研究的目的是研究印度西部急性髓性白血病(AML)亚组染色体畸变的模式和频率。
    通过评估2005年至2014年期间用于诊断和治疗AML受试者的实验室形式进行了回顾性研究。
    我们研究了来自印度西部的282名AML患者的染色体畸变。AML患者根据FAB分类进行分组。使用FISH探针(AML1/ETO,PML/RARA,CBFB)。
    连续变量的学生t检验和分类变量的皮尔逊卡方检验用于确定变量之间的关系。
    细胞形态学研究显示,AML-M3是最常见的组(32.3%),其次是AML-M2(25.2%)和AML-M4(19.9%)。在145例(51.42%)的AML病例中发现了染色体异常。与AML-M2(31%)和AML-M4(20.6%)相比,在AML-M3亚组中发现了高频率(38.6%)的染色体异常。
    细胞遗传学研究对于AML患者的诊断和治疗很重要。我们的研究确定了AML亚群中染色体异常的频率不同。它在疾病的诊断和监测中很重要。由于年轻的AML患者在我们的研究中受到的影响更大,环境因素等病因学因素需要研究。常规细胞遗传学和FISH的组合具有在AML患者中识别高频率的染色体畸变的优势。
    UNASSIGNED: Chromosomal abnormalities play an important role in diagnosis and prognosis of hematological diseases.
    UNASSIGNED: The aim of the present study was to study the pattern and frequency of chromosomal aberrations in acute myeloid leukemia (AML) subgroups from western India.
    UNASSIGNED: A retrospective study was conducted through evaluating laboratory proforma which were filled during 2005 to 2014 for diagnosis and treatment of AML subjects.
    UNASSIGNED: We have studied chromosomal aberrations in 282 subjects with AML from western India. AML patients were sub-grouped according to FAB classification. Cytogenetic study using conventional cytogenetics (GTG-banding) and Fluorescence in situ hybridization (FISH) was carried out using FISH probes (AML1/ETO, PML/RARA, CBFB).
    UNASSIGNED: Student\'s t test for continuous variables and Pearson\'s Chi-squared test for categorical variables were used to identify the relationship between variables.
    UNASSIGNED: Cytomorphological study revealed AML- M3 as most frequent (32.3%) group followed by AML-M2 (25.2%) and AML-M4 (19.9%). Chromosomal abnormalities were identified in 145 (51.42%) of the total AML cases. A high frequency (38.6%) of chromosomal abnormalities was identified in AML-M3 subgroup as compared to AML-M2 (31%) and AML-M4 (20.6%).
    UNASSIGNED: Cytogenetic study is important for the diagnosis and management of the AML patients. Our study identified chromosomal abnormalities in AML subgroups with varied frequencies. It is important in diagnosis and monitoring of the disease. As younger AML patients were more affected in our study, etiological factors such as environmental factors need to be studied. Combination of conventional cytogenetics and FISH has an advantage of identifying high frequency of chromosomal aberrations in AML patients.
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  • 文章类型: Journal Article
    The risk of toxicity attributable to radioiodine therapy (RIT) remains a subject of ongoing research, with a whole-body dose of 2 Gy proposed as a safe limit. This article evaluates the RIT-induced cytogenetic damage in two rare differentiated thyroid cancer (DTC) cases, including the first follow-up study of a pediatric DTC patient. Chromosome damage in the patient\'s peripheral blood lymphocytes (PBL) was examined using conventional metaphase assay, painting of chromosomes 2, 4, and 12 (FISH), and multiplex fluorescence in situ hybridization (mFISH). Patient 1 (female, 1.6 y.o.) received four RIT courses over 1.1 years. Patient 2 (female, 49 y.o.) received 12 courses over 6.4 years, the last two of which were examined. Blood samples were collected before and 3-4 days after the treatment. Chromosome aberrations (CA) analyzed by conventional and FISH methods were converted to a whole-body dose accounting for the dose rate effect. The mFISH method showed an increase in total aberrant cell frequency following each RIT course, while cells carrying unstable aberrations predominated in the yield. The proportion of cells containing stable CA associated with long-term cytogenetic risk remained mostly unchanged during follow-up for both patients. A one-time administration of RIT was safe, as the threshold of 2 Gy for the whole-body dose was not exceeded. The risk of side effects projected from RIT-attributable cytogenetic damage was low, suggesting a good long-term prognosis. In rare cases, such as the ones reviewed in this study, individual planning based on cytogenetic biodosimetry is strongly recommended.
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