microdomains

微结构域
  • 文章类型: Journal Article
    卵菌门含有经济上重要的动植物病原体,包括寄生腐殖质,鱼病腐殖质病的病原体。由于密集的鱼类养殖和禁止最有效的控制措施,腐殖质病已重新成为水产养殖业的主要挑战。卵菌细胞被富含多糖的细胞壁基质包围,除了对细胞生长至关重要之外,还可以作为保护性的“盔甲”。\"因此,负责细胞壁合成的酶为疾病控制提供了潜在的靶标。卵菌细胞壁生物合成酶被预测为质膜蛋白。为了鉴定这些蛋白质,我们将定量(iTRAQ)基于质谱的蛋白质组学方法应用于寄生链球菌菌丝细胞的质膜,提供卵菌物种的第一个完整的质膜蛋白质组。重要的是鉴定富含洗涤剂抗性微域(DRMs)的65种蛋白质。计算机分析表明,DRM富集蛋白主要参与分子转运和β-1,3-葡聚糖合成,可能导致发病机制。此外,这些微域中糖基转移酶活性的生化表征进一步支持了它们在β-1,3-葡聚糖合成中的作用。总之,在这项研究中获得的知识为制定针对寄生链球菌的特定质膜蛋白的疾病控制措施提供了基础。重要意义这项研究的意义在于其对抗腐乳质的潜力,一种有害的鱼类疾病,由于集约化的鱼类养殖和监管限制,这种情况已经恢复。通过靶向寄生虫中负责细胞壁合成的酶,这项研究揭示了疾病控制的潜在途径.特别值得注意的是鉴定了几种富含膜微域的蛋白质,提供对可能参与发病机制的分子机制的见解。了解这些蛋白质的作用为制定有针对性的疾病控制措施提供了基础。总的来说,这项研究为保护水产养殖业免受腐殖质病带来的挑战提供了希望。
    The phylum Oomycota contains economically important pathogens of animals and plants, including Saprolegnia parasitica, the causal agent of the fish disease saprolegniasis. Due to intense fish farming and banning of the most effective control measures, saprolegniasis has re-emerged as a major challenge for the aquaculture industry. Oomycete cells are surrounded by a polysaccharide-rich cell wall matrix that, in addition to being essential for cell growth, also functions as a protective \"armor.\" Consequently, the enzymes responsible for cell wall synthesis provide potential targets for disease control. Oomycete cell wall biosynthetic enzymes are predicted to be plasma membrane proteins. To identify these proteins, we applied a quantitative (iTRAQ) mass spectrometry-based proteomics approach to the plasma membrane of the hyphal cells of S. parasitica, providing the first complete plasma membrane proteome of an oomycete species. Of significance is the identification of 65 proteins enriched in detergent-resistant microdomains (DRMs). In silico analysis showed that DRM-enriched proteins are mainly involved in molecular transport and β-1,3-glucan synthesis, potentially contributing to pathogenesis. Moreover, biochemical characterization of the glycosyltransferase activity in these microdomains further supported their role in β-1,3-glucan synthesis. Altogether, the knowledge gained in this study provides a basis for developing disease control measures targeting specific plasma membrane proteins in S. parasitica.IMPORTANCEThe significance of this research lies in its potential to combat saprolegniasis, a detrimental fish disease, which has resurged due to intensive fish farming and regulatory restrictions. By targeting enzymes responsible for cell wall synthesis in Saprolegnia parasitica, this study uncovers potential avenues for disease control. Particularly noteworthy is the identification of several proteins enriched in membrane microdomains, offering insights into molecular mechanisms potentially involved in pathogenesis. Understanding the role of these proteins provides a foundation for developing targeted disease control measures. Overall, this research holds promise for safeguarding the aquaculture industry against the challenges posed by saprolegniasis.
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  • 文章类型: Journal Article
    单个细胞中存在不同的脂滴(LD)池,并通过其独特的蛋白质组和脂质组成来划分。专注于基于酵母的工作,我们简要回顾了对LD子集的理解状态,以及特定蛋白质如何通过脂质吞噬和脂解介导的周转来决定其身份和命运。
    Distinct pools of lipid droplets (LDs) exist in individual cells and are demarcated both by their unique proteomes and lipid compositions. Focusing on yeast-based work, we briefly review the state of understanding of LD subsets, and how specific proteins can dictate their identities and fates through lipophagy and lipolysis-mediated turnover.
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  • 文章类型: Journal Article
    Caveolae是表面膜的小烧瓶形内陷,被提议招募和共定位信号分子。独特的小窝形状是通过寡聚结构蛋白小窝蛋白实现的,其中存在三种同工型。除了caveolin-3在肌肉中特异性表达的发现,小窝蛋白同工型之间的功能差异尚未得到严格研究。与小窝蛋白1和2相比,小窝蛋白-3相对富含半胱氨酸,因此我们研究了其半胱氨酸翻译后修饰。我们发现caveolin-3在6个半胱氨酸处被棕榈酰化,并在氧化还原应激后变成谷胱甘肽化。我们将caveolin-3棕榈酰化位点映射到其C末端膜结构域中的一组半胱氨酸,和一个N末端半胱氨酸的谷胱甘肽位点,该半胱氨酸靠近拟参与蛋白质相互作用的caveolin-3区域。谷胱甘肽消除了caveolin-3与异源三聚体G蛋白α亚基的相互作用。我们的结果表明,caveolin-3低聚物含有多达66棕榈酸酯,相比之下,caveolin-1高达33。因此,小窝蛋白3中的其他棕榈酰化位点提供了一种机制基础,通过该机制,平滑肌和横纹肌中的小窝可以拥有独特的磷脂和蛋白质货物。肌肉特异性小窝蛋白同工型的这些独特适应对小窝组装和信号传导具有重要意义。
    Caveolae are small flask-shaped invaginations of the surface membrane which are proposed to recruit and co-localize signaling molecules. The distinctive caveolar shape is achieved by the oligomeric structural protein caveolin, of which three isoforms exist. Aside from the finding that caveolin-3 is specifically expressed in muscle, functional differences between the caveolin isoforms have not been rigorously investigated. Caveolin-3 is relatively cysteine-rich compared to caveolins 1 and 2, so we investigated its cysteine post-translational modifications. We find that caveolin-3 is palmitoylated at 6 cysteines and becomes glutathiolated following redox stress. We map the caveolin-3 palmitoylation sites to a cluster of cysteines in its C terminal membrane domain, and the glutathiolation site to an N terminal cysteine close to the region of caveolin-3 proposed to engage in protein interactions. Glutathiolation abolishes caveolin-3 interaction with heterotrimeric G protein alpha subunits. Our results indicate that a caveolin-3 oligomer contains up to 66 palmitates, compared to up to 33 for caveolin-1. The additional palmitoylation sites in caveolin-3 therefore provide a mechanistic basis by which caveolae in smooth and striated muscle can possess unique phospholipid and protein cargoes. These unique adaptations of the muscle-specific caveolin isoform have important implications for caveolar assembly and signaling.
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  • 文章类型: Journal Article
    制备同时具有高度坚固和坚韧性能的材料一直是一个巨大的挑战。热固性树脂作为一种广泛使用的高分子材料,没有协同的强度和韧性,限制了其在某些特殊领域的应用。在这份报告中,我们提出了一种有效的策略来制备具有协同强度和韧性的热固性树脂。在这种方法中,首先制备了具有动态半缩醛键的软硬微球,然后热压在界面处交联。具体来说,通过沉淀聚合制备刚性或柔性微球。热压后,所得的刚软混合材料同时具有优异的强度和韧性。与前体刚性或柔性材料相比,刚软共混膜(RSBF)的韧性分别提高到240%和2100%,分别,而强度与刚性前体相当。与传统的破碎相比,混合,并对刚性或软质材料进行热压以获得不均匀的材料,刚软共混膜的强度和韧性分别提高到168%和255%,分别。这种方法对于制造具有强度和韧性的独特组合的聚合物热固性材料具有重要的前景。本文受版权保护。保留所有权利。
    Preparation of materials that possess highly strong and tough properties simultaneously is a great challenge. Thermosetting resins as a type of widely used polymeric materials without synergistic strength and toughness limit their applications in some special fields. In this report, an effective strategy to prepare thermosetting resins with synergistic strength and toughness, is presented. In this method, the soft and rigid microspheres with dynamic hemiaminal bonds are fabricated first, followed by hot-pressing to crosslink at the interfaces. Specifically, the rigid or soft microspheres are prepared via precipitation polymerization. After hot-pressing, the resulting rigid-soft blending materials exhibit superior strength and toughness, simultaneously. As compared with the precursor rigid or soft materials, the toughness of the rigid-soft blending films (RSBFs) is improved to 240% and 2100%, respectively, while the strength is comparable to the rigid precursor. As compared with the traditional crushing, blending, and hot-pressing of rigid or soft materials to get the nonuniform materials, the strength and toughness of the RSBFs are improved to 168% and 255%, respectively. This approach holds significant promise for the fabrication of polymer thermosets with a unique combination of strength and toughness.
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  • 文章类型: Journal Article
    Syntaxin1a(Syx1a)对于神经内分泌细胞的刺激胞吐作用至关重要。囊泡对接过程涉及在质膜上形成纳米级Syx1a结构域,并且Syx1a簇在融合过程中分解。Syx1a纳米域是静态的,但Syx1a分子动态地进入和离开域;这些簇维持这种平衡的过程尚不清楚。在这项工作中,Syx1a分子的动力学通过标记策略相对于簇位置得以阐明,该标记策略允许同时可视化Syx簇的整体位置与PC12细胞表面上单个Syx1a分子的轨迹。相对于簇位置及时跟踪单个Syx1a分子,以破译Syx1a如何在簇内移动以及何时不存在簇。Syx1a在质膜上是移动的,在集群的中心更具移动性,并且在簇边缘附近的移动性较小;这取决于N末端Habc域和胆固醇的存在,这对适当的胞吐作用至关重要。在簇中观察到的动力学的模拟支持一个模型,其中簇由一个大笼(r=100nm)维持,其中Syx1a在簇中保持高度移动(r=50nm)。胆固醇的消耗显着降低了Syx1a在簇中的迁移率,而在质膜的其余部分上则更少。这表明Syx1a超分子簇的流动性是功能所必需的。
    Syntaxin1a (Syx1a) is essential for stimulated exocytosis in neuroendocrine cells. The vesicle docking process involves the formation of nanoscale Syx1a domains on the plasma membrane and the Syx1a clusters disintegrate during the fusion process. Syx1a nanodomains are static yet Syx1a molecules dynamically enter and leave the domains; the process by which these clusters maintain this balance is unclear. In this work, the dynamics of the Syx1a molecules is elucidated relative to the cluster position through a labeling strategy that allows both the bulk position of the Syx clusters to be visualized concurrent with the trajectories of single Syx1a molecules on the surface of PC12 cells. Single Syx1a molecules were tracked in time relative to cluster positions to decipher how Syx1a moves within a cluster and when clusters are not present. Syx1a is mobile on the plasma membrane, more mobile at the center of clusters, and less mobile near the edges of clusters; this depends on the presence of the N-terminal Habc domain and cholesterol, which are essential for proper exocytosis. Simulations of the dynamics observed at clusters support a model where clusters are maintained by a large cage (r = 100 nm) within which Syx1a remains highly mobile within the cluster (r = 50 nm). The depletion of cholesterol dramatically reduces the mobility of Syx1a within clusters and less so over the rest of the plasma membrane. This suggests that fluidity of Syx1a supramolecular clusters is needed for function.
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  • 文章类型: Journal Article
    烟碱乙酰胆碱受体(nAChRs)属于cys-loop受体超家族,其特征在于将五个亚基组装成多蛋白通道复合物。与nAChRs结合的配体激活受体的快速变构转变,导致神经元和非神经元细胞中的通道开放和离子流。因此,虽然nAChRs的离子变性是公认的,对配体介导的细胞内代谢信号应答的了解较少。对神经细胞和非神经细胞的研究证实了配体结合后的离子型和代谢型通道反应。在这篇综述中,我们总结了同五聚体α7nAChRs在各种细胞类型中存在离子型和代谢型信号应答的证据。我们探索了通过离子通道的协调钙进入和附近商店的钙释放如何产生对细胞骨架运动和细胞生长的调节重要的信号。α7nAChR内用于细胞内蛋白结合的氨基酸残基支持参与代谢反应,包括通过神经和免疫细胞中的异源三聚体G蛋白进行信号传导。了解离子型和代谢型nAChR反应的双重特性对于推进用于治疗各种人类疾病的药物开发至关重要。
    Nicotinic acetylcholine receptors (nAChRs) belong to a superfamily of cys-loop receptors characterized by the assembly of five subunits into a multi-protein channel complex. Ligand binding to nAChRs activates rapid allosteric transitions of the receptor leading to channel opening and ion flux in neuronal and non-neuronal cell. Thus, while ionotropic properties of nAChRs are well recognized, less is known about ligand-mediated intracellular metabotropic signaling responses. Studies in neural and non-neural cells confirm ionotropic and metabotropic channel responses following ligand binding. In this review we summarize evidence on the existence of ionotropic and metabotropic signaling responses by homopentameric α7 nAChRs in various cell types. We explore how coordinated calcium entry through the ion channel and calcium release from nearby stores gives rise to signaling important for the modulation of cytoskeletal motility and cell growth. Amino acid residues for intracellular protein binding within the α7 nAChR support engagement in metabotropic responses including signaling through heterotrimeric G proteins in neural and immune cells. Understanding the dual properties of ionotropic and metabotropic nAChR responses is essential in advancing drug development for the treatment of various human disease.
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  • 文章类型: Journal Article
    ryanodine受体2型(RyR)是激发-收缩偶联过程中Ca2处理的关键因素。在每次心跳期间,RyR通道负责通过从肌浆网释放Ca2来将动作电位与心肌细胞的收缩机械连接。RyR功能由相关的信号分子微调,簇排列和亚细胞定位。这些参数一起定义了微结构域内的RyR功能并且经受疾病重塑。这篇综述描述了RyR微域组织的最新发现,疾病的改变导致亚细胞异质性增加和心律失常潜能增强的微域的出现,并提出了指导未来研究的新技术,以研究和靶向特定微域内的RyR通道。
    The ryanodine receptor type 2 (RyR) is a key player in Ca2+ handling during excitation-contraction coupling. During each heartbeat, RyR channels are responsible for linking the action potential with the contractile machinery of the cardiomyocyte by releasing Ca2+ from the sarcoplasmic reticulum. RyR function is fine-tuned by associated signalling molecules, arrangement in clusters and subcellular localization. These parameters together define RyR function within microdomains and are subject to disease remodelling. This review describes the latest findings on RyR microdomain organization, the alterations with disease which result in increased subcellular heterogeneity and emergence of microdomains with enhanced arrhythmogenic potential, and presents novel technologies that guide future research to study and target RyR channels within specific microdomains.
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  • 文章类型: Journal Article
    迁移小体是一种新发现的迁移细胞的细胞器。移动体发挥不同的生理作用,包括线粒体质量控制,细胞间物质的横向转移,并将信号分子传递到空间定义的位置。迁移体的形成依赖于四跨膜蛋白,一组含有四个跨膜结构域的膜蛋白,其形成称为四跨膜蛋白富集的微域(TEMs)的膜微域。在这次审查中,我们将讨论迁移体生物发生的机制,重点关注TEM的作用和TEM形成的组织原则。
    The migrasome is a newly discovered organelle of migrating cells. Migrasomes play diverse physiological roles including mitochondrial quality control, lateral transfer of material between cells, and delivery of signaling molecules to spatially defined locations. The formation of migrasomes is dependent on tetraspanins, a group of membrane proteins containing four transmembrane domains, which form membrane microdomains named tetraspanin-enriched microdomains (TEMs). In this review, we will discuss the mechanisms for migrasome biogenesis, with a focus on the role of TEMs and the organizing principles underlying the formation of TEMs.
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  • 文章类型: Review
    生长素是一种多功能的植物生长调节剂,可在不同的空间和时间分辨率下触发多种信号通路。植物细胞被细胞壁包围,多糖的复杂和动态网络。细胞壁需要是刚性的以提供机械支撑和保护,并且需要高度柔性以允许细胞生长和形状获取。果胶成分的改性,在其他过程中,是生长素活性改变细胞壁机械性能的机制。生长素信号精确控制几个果胶重塑酶编码基因的转录输出,它们在不同发育环境中的局部活性和果胶沉积和调节。这篇综述探讨了生长素活性在调节器官果胶化学中的机制,跨不同植物物种的细胞和亚细胞水平,并提出了有待解决的问题,以充分了解植物生长和发育中生长素和果胶之间的相互作用。
    Auxin is a versatile plant growth regulator that triggers multiple signalling pathways at different spatial and temporal resolutions. A plant cell is surrounded by the cell wall, a complex and dynamic network of polysaccharides. The cell wall needs to be rigid to provide mechanical support and protection and highly flexible to allow cell growth and shape acquisition. The modification of the pectin components, among other processes, is a mechanism by which auxin activity alters the mechanical properties of the cell wall. Auxin signalling precisely controls the transcriptional output of several genes encoding pectin remodelling enzymes, their local activity, pectin deposition, and modulation in different developmental contexts. This review examines the mechanism of auxin activity in regulating pectin chemistry at organ, cellular, and subcellular levels across diverse plant species. Moreover, we ask questions that remain to be addressed to fully understand the interplay between auxin and pectin in plant growth and development.
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  • 文章类型: Journal Article
    从甜菜根的组织碎片高速离心后,借助非去污剂技术在蔗糖密度梯度区域中分离出的质膜的脂质-蛋白质微区的研究,经历了氧化应激,进行了。微域,他们的脂质成分-根据定义-允许我们将它们分类为筏,被研究过。暴露于氧化应激(100mM过氧化氢)后,膜脂质组成的变化主要与筏形成脂质(固醇,甾醇酯)。氧化应激在甾醇的组成中引起了重新分布,这导致菜油甾醇的含量和豆甾醇/谷甾醇的比例升高。此外,这些变化记录在磷脂和磷酸甘油酯的含量上,能够稳定膜的层状结构。获得的结果允许人们假设在氧化应激下,质膜微域中脂质组成的变化可能发生。这些变化可能会影响膜的功能,膜可能参与植物细胞的保护。
    The investigation of the lipid-protein microdomains of the plasmalemma isolated with the aid of the non-detergent technique in the zones of the sucrose density gradient after high-speed centrifugation from the tissue pieces of beet roots, which underwent oxidative stress, was conducted. The microdomains, whose lipid composition - according to the definition - allowed us to classify them as rafts, were studied. After the exposure to oxidative stress (100 mM hydrogen peroxide), the variations in the composition of membrane lipids bound up mainly with the elevations of the content of raft-forming lipids (sterols, sterol esters). Oxidative stress provoked redistribution in the composition of sterols, which led to an elevation in the content of campesterol and in the ratio of stigmasterol/sitosterol. Furthermore, the variations were registered in the content of phospholipids and phosphoglycerolipids, which are capable of stabilizing the lamellar structure of membranes. The results obtained allow one to assume that under the oxidative stress, variations in the composition of lipids in microdomains of the plasma membrane can take place. These variations may influence the functioning of the membranes, and the membranes may participate in the protection of the plant cell.
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