microdomains

微结构域
  • 文章类型: Journal Article
    卵菌门含有经济上重要的动植物病原体,包括寄生腐殖质,鱼病腐殖质病的病原体。由于密集的鱼类养殖和禁止最有效的控制措施,腐殖质病已重新成为水产养殖业的主要挑战。卵菌细胞被富含多糖的细胞壁基质包围,除了对细胞生长至关重要之外,还可以作为保护性的“盔甲”。\"因此,负责细胞壁合成的酶为疾病控制提供了潜在的靶标。卵菌细胞壁生物合成酶被预测为质膜蛋白。为了鉴定这些蛋白质,我们将定量(iTRAQ)基于质谱的蛋白质组学方法应用于寄生链球菌菌丝细胞的质膜,提供卵菌物种的第一个完整的质膜蛋白质组。重要的是鉴定富含洗涤剂抗性微域(DRMs)的65种蛋白质。计算机分析表明,DRM富集蛋白主要参与分子转运和β-1,3-葡聚糖合成,可能导致发病机制。此外,这些微域中糖基转移酶活性的生化表征进一步支持了它们在β-1,3-葡聚糖合成中的作用。总之,在这项研究中获得的知识为制定针对寄生链球菌的特定质膜蛋白的疾病控制措施提供了基础。重要意义这项研究的意义在于其对抗腐乳质的潜力,一种有害的鱼类疾病,由于集约化的鱼类养殖和监管限制,这种情况已经恢复。通过靶向寄生虫中负责细胞壁合成的酶,这项研究揭示了疾病控制的潜在途径.特别值得注意的是鉴定了几种富含膜微域的蛋白质,提供对可能参与发病机制的分子机制的见解。了解这些蛋白质的作用为制定有针对性的疾病控制措施提供了基础。总的来说,这项研究为保护水产养殖业免受腐殖质病带来的挑战提供了希望。
    The phylum Oomycota contains economically important pathogens of animals and plants, including Saprolegnia parasitica, the causal agent of the fish disease saprolegniasis. Due to intense fish farming and banning of the most effective control measures, saprolegniasis has re-emerged as a major challenge for the aquaculture industry. Oomycete cells are surrounded by a polysaccharide-rich cell wall matrix that, in addition to being essential for cell growth, also functions as a protective \"armor.\" Consequently, the enzymes responsible for cell wall synthesis provide potential targets for disease control. Oomycete cell wall biosynthetic enzymes are predicted to be plasma membrane proteins. To identify these proteins, we applied a quantitative (iTRAQ) mass spectrometry-based proteomics approach to the plasma membrane of the hyphal cells of S. parasitica, providing the first complete plasma membrane proteome of an oomycete species. Of significance is the identification of 65 proteins enriched in detergent-resistant microdomains (DRMs). In silico analysis showed that DRM-enriched proteins are mainly involved in molecular transport and β-1,3-glucan synthesis, potentially contributing to pathogenesis. Moreover, biochemical characterization of the glycosyltransferase activity in these microdomains further supported their role in β-1,3-glucan synthesis. Altogether, the knowledge gained in this study provides a basis for developing disease control measures targeting specific plasma membrane proteins in S. parasitica.IMPORTANCEThe significance of this research lies in its potential to combat saprolegniasis, a detrimental fish disease, which has resurged due to intensive fish farming and regulatory restrictions. By targeting enzymes responsible for cell wall synthesis in Saprolegnia parasitica, this study uncovers potential avenues for disease control. Particularly noteworthy is the identification of several proteins enriched in membrane microdomains, offering insights into molecular mechanisms potentially involved in pathogenesis. Understanding the role of these proteins provides a foundation for developing targeted disease control measures. Overall, this research holds promise for safeguarding the aquaculture industry against the challenges posed by saprolegniasis.
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  • 文章类型: Journal Article
    迁移小体是一种新发现的迁移细胞的细胞器。移动体发挥不同的生理作用,包括线粒体质量控制,细胞间物质的横向转移,并将信号分子传递到空间定义的位置。迁移体的形成依赖于四跨膜蛋白,一组含有四个跨膜结构域的膜蛋白,其形成称为四跨膜蛋白富集的微域(TEMs)的膜微域。在这次审查中,我们将讨论迁移体生物发生的机制,重点关注TEM的作用和TEM形成的组织原则。
    The migrasome is a newly discovered organelle of migrating cells. Migrasomes play diverse physiological roles including mitochondrial quality control, lateral transfer of material between cells, and delivery of signaling molecules to spatially defined locations. The formation of migrasomes is dependent on tetraspanins, a group of membrane proteins containing four transmembrane domains, which form membrane microdomains named tetraspanin-enriched microdomains (TEMs). In this review, we will discuss the mechanisms for migrasome biogenesis, with a focus on the role of TEMs and the organizing principles underlying the formation of TEMs.
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  • 文章类型: Review
    生长素是一种多功能的植物生长调节剂,可在不同的空间和时间分辨率下触发多种信号通路。植物细胞被细胞壁包围,多糖的复杂和动态网络。细胞壁需要是刚性的以提供机械支撑和保护,并且需要高度柔性以允许细胞生长和形状获取。果胶成分的改性,在其他过程中,是生长素活性改变细胞壁机械性能的机制。生长素信号精确控制几个果胶重塑酶编码基因的转录输出,它们在不同发育环境中的局部活性和果胶沉积和调节。这篇综述探讨了生长素活性在调节器官果胶化学中的机制,跨不同植物物种的细胞和亚细胞水平,并提出了有待解决的问题,以充分了解植物生长和发育中生长素和果胶之间的相互作用。
    Auxin is a versatile plant growth regulator that triggers multiple signalling pathways at different spatial and temporal resolutions. A plant cell is surrounded by the cell wall, a complex and dynamic network of polysaccharides. The cell wall needs to be rigid to provide mechanical support and protection and highly flexible to allow cell growth and shape acquisition. The modification of the pectin components, among other processes, is a mechanism by which auxin activity alters the mechanical properties of the cell wall. Auxin signalling precisely controls the transcriptional output of several genes encoding pectin remodelling enzymes, their local activity, pectin deposition, and modulation in different developmental contexts. This review examines the mechanism of auxin activity in regulating pectin chemistry at organ, cellular, and subcellular levels across diverse plant species. Moreover, we ask questions that remain to be addressed to fully understand the interplay between auxin and pectin in plant growth and development.
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  • 文章类型: Journal Article
    从甜菜根的组织碎片高速离心后,借助非去污剂技术在蔗糖密度梯度区域中分离出的质膜的脂质-蛋白质微区的研究,经历了氧化应激,进行了。微域,他们的脂质成分-根据定义-允许我们将它们分类为筏,被研究过。暴露于氧化应激(100mM过氧化氢)后,膜脂质组成的变化主要与筏形成脂质(固醇,甾醇酯)。氧化应激在甾醇的组成中引起了重新分布,这导致菜油甾醇的含量和豆甾醇/谷甾醇的比例升高。此外,这些变化记录在磷脂和磷酸甘油酯的含量上,能够稳定膜的层状结构。获得的结果允许人们假设在氧化应激下,质膜微域中脂质组成的变化可能发生。这些变化可能会影响膜的功能,膜可能参与植物细胞的保护。
    The investigation of the lipid-protein microdomains of the plasmalemma isolated with the aid of the non-detergent technique in the zones of the sucrose density gradient after high-speed centrifugation from the tissue pieces of beet roots, which underwent oxidative stress, was conducted. The microdomains, whose lipid composition - according to the definition - allowed us to classify them as rafts, were studied. After the exposure to oxidative stress (100 mM hydrogen peroxide), the variations in the composition of membrane lipids bound up mainly with the elevations of the content of raft-forming lipids (sterols, sterol esters). Oxidative stress provoked redistribution in the composition of sterols, which led to an elevation in the content of campesterol and in the ratio of stigmasterol/sitosterol. Furthermore, the variations were registered in the content of phospholipids and phosphoglycerolipids, which are capable of stabilizing the lamellar structure of membranes. The results obtained allow one to assume that under the oxidative stress, variations in the composition of lipids in microdomains of the plasma membrane can take place. These variations may influence the functioning of the membranes, and the membranes may participate in the protection of the plant cell.
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  • 文章类型: Journal Article
    H2S是在哺乳动物中酶促产生的气态信号分子,并且H2S产生酶在整个血管壁表达。我们以前报道过H2S诱导的血管舒张是通过瞬时受体电位阳离子通道亚家族V成员4(TRPV4)和大电导(BKCa)钾通道介导的;然而,该途径的调节因子尚未定义。以前的报道表明,膜胆固醇限制了TRPV4和BKCa钾通道的活性。当前的研究检查了内皮细胞(EC)质膜(PM)胆固醇调节H2S诱导的血管舒张的能力。我们假设ECPM胆固醇会阻碍大肠系膜动脉中H2S介导的血管舒张。在加压中,U46619肠系膜动脉收缩前,使用甲基-β-环糊精(MBCD,100µM)增加了H2S诱导的扩张(NaHS10,100µM),但MBCD治疗对小动脉没有影响。表面荧光显示,大肠系膜动脉的ECPM胆固醇含量高于小动脉。MBCD治疗大动脉后NaHS诱导的血管舒张被TRPV4和BKCa通道抑制剂阻断(GSK219384A,300nM和艾贝毒素,100nM,分别)。肠系膜动脉横截面的免疫组织化学显示,TRPV4和BKCa均存在于大动脉和小动脉的EC中。在小动脉的ECPM中补充胆固醇消除了NaHS诱导的血管舒张,但胆固醇对映体,表胆固醇,没有效果。邻近连接测定研究未显示ECPM胆固醇含量与TRPV4和BK的关联之间的相关性。总的来说,这些结果表明,ECPM胆固醇通过影响ECTRPV4和BKCa通道来限制H2S诱导的血管舒张.
    H2S is a gaseous signaling molecule enzymatically produced in mammals and H2S-producing enzymes are expressed throughout the vascular wall. We previously reported that H2S-induced vasodilation is mediated through transient receptor potential cation channel subfamily V member 4 (TRPV4) and large conductance (BKCa) potassium channels; however, regulators of this pathway have not been defined. Previous reports have shown that membrane cholesterol limits activity of TRPV4 and BKCa potassium channels. The current study examined the ability of endothelial cell (EC) plasma membrane (PM) cholesterol to regulate H2S-induced vasodilation. We hypothesized that EC PM cholesterol hinders H2S-mediated vasodilation in large mesenteric arteries. In pressurized, U46619 pre-constricted mesenteric arteries, decreasing EC PM cholesterol in large arteries using methyl-β-cyclodextrin (MBCD, 100 µM) increased H2S-induced dilation (NaHS 10, 100 µM) but MBCD treatment had no effect in small arteries. Enface fluorescence showed EC PM cholesterol content is higher in large mesenteric arteries than in smaller arteries. The NaHS-induced vasodilation following MBCD treatment in large arteries was blocked by TRPV4 and BKCa channel inhibitors (GSK219384A, 300 nM and iberiotoxin, 100 nM, respectively). Immunohistochemistry of mesenteric artery cross-sections show that TRPV4 and BKCa are both present in EC of large and small arteries. Cholesterol supplementation into EC PM of small arteries abolished NaHS-induced vasodilation but the cholesterol enantiomer, epicholesterol, had no effect. Proximity ligation assay studies did not show a correlation between EC PM cholesterol content and the association of TRPV4 and BK. Collectively, these results demonstrate that EC PM cholesterol limits H2S-induced vasodilation through effects on EC TRPV4 and BKCa channels.
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  • 文章类型: Journal Article
    结论:液泡膜微域含量的变化,借助非洗涤剂技术分离,是由渗透胁迫诱导的,可能参与植物细胞适应机制。研究了借助非去污剂技术从经受高渗或低渗胁迫的甜菜根(BetavulgarisL.)中分离出的液泡膜微域脂质。早些时候,证明了液泡膜脂质在保护植物细胞免受胁迫中的重要作用(Ozolina等人。2020a)。在本论文中,我们提出了一个假设,即存在于液泡膜中的移植物性质的微结构域的脂质负责这种保护功能。在高渗和低渗胁迫下,所研究的非洗涤剂分离的微域(NIM)的脂质含量变化是不同的。在高渗胁迫下,在经过仔细检查的微域中,记录了脂质含量的一些变化,这是已知的保护性抗应激机制的特征。这些变化表现为能够稳定膜的双层结构的甾醇和极性脂质的增加。发现的甾醇含量的变化可能与压力下自噬过程的某些增强有关,因为甾醇促进了该过程所需的新膜接触的形成。在低渗胁迫下,在经过仔细检查的膜结构中,脂质的重新分布模式是不同的:脂质的最大部分似乎是由碳氢化合物代表的,主要在植物中发挥保护作用,可以防止多余的水流入液泡。获得的结果不仅证明了液泡膜微域的可能功能,而且还提出了任何膜微域在植物细胞保护机制中的作用的假设。
    CONCLUSIONS: Variations in the content of tonoplast microdomains, isolated with the aid of a non-detergent technique, are induced by osmotic stress and may take part in plant cell adaptive mechanisms. Investigation of tonoplast microdomain lipids isolated with the aid of the non-detergent technique from beetroots (Beta vulgaris L.) subjected to either hyperosmotic or hypoosmotic stress was conducted. Earlier, an important role of tonoplast lipids in the protection of plant cells from stress was demonstrated (Ozolina et al. 2020a). In the present paper, we have put forward a hypothesis that lipids of microdomains of raft nature present in the tonoplast are responsible for this protective function. The variations in the content of lipids of the studied nondetergent-isolated microdomains (NIMs) under hyperosmotic and hypoosmotic stresses were different. Under hyperosmotic stress, in the scrutinized microdomains, some variations in the content of lipids were registered, which were characteristic of the already known protective anti-stress mechanisms. These variations were represented by an increase in sterols and polar lipids capable of stabilizing the bilayer structure of the membranes. The found variations in the content of sterols may be bound up with some intensification of the autophagy process under stress because sterols foster the formation of new membrane contacts necessary for this process. Under hypoosmotic stress, the pattern of redistribution of the lipids in the scrutinized membrane structures was different: the largest part of the lipids appeared to be represented by hydrocarbons, which fulfilled mainly a protective function in plants and could prevent the excess water influx into the vacuole. The results obtained not only demonstrate the possible functions of the vacuolar membrane microdomains but also put forward an assumption on the role of any membrane microdomain in the protection mechanisms of the plant cell.
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  • 文章类型: Journal Article
    SNARE proteins have been described as the effectors of fusion events in the secretory pathway more than two decades ago. The strong interactions between SNARE domains are clearly important in membrane fusion, but it is unclear whether they are involved in any other cellular processes. Here, we analyzed two classical SNARE proteins, syntaxin 1A and SNAP25. Although they are supposed to be engaged in tight complexes, we surprisingly find them largely segregated in the plasma membrane. Syntaxin 1A only occupies a small fraction of the plasma membrane area. Yet, we find it is able to redistribute the far more abundant SNAP25 on the mesoscale by gathering crowds of SNAP25 molecules onto syntaxin clusters in a SNARE-domain-dependent manner. Our data suggest that SNARE domain interactions are not only involved in driving membrane fusion on the nanoscale, but also play an important role in controlling the general organization of proteins on the mesoscale. Further, we propose these mechanisms preserve active syntaxin 1A-SNAP25 complexes at the plasma membrane.
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  • 文章类型: Journal Article
    β-肾上腺素受体(βAR)通常被视为原型G蛋白偶联受体。在过去的十五年里,心血管生物学的研究为该受体家族提供了非凡的见解。这些研究改变了药理学教条,从一个集中受体到一个新的关注结构微域,如caveolae和t-tubulles。重要的研究已经检查,分开,离子通道和βAR的结构划分。尽管假设有联系,相对较少的研究专门研究了结构重塑和电重塑之间的直接联系,重点是βAR。在这次审查中,我们将检查受体和离子通道功能障碍的性质在心肌细胞微域重塑的底物,以及对心脏电生理的可能影响。然后,我们将讨论该领域的方法进展,特别关注超分辨率显微镜,荧光成像,和涉及微域特异性的新方法,基于聚合物的激动剂。强大的计算建模方法的出现使科学从纯粹的经验工作转变,并可能允许基于预测的未来调查。还将讨论诸如受体的交叉反应性和细胞异质性等问题。最后,我们将推测未来十年该领域的潜在发展。
    Beta-adrenoceptors (βAR) are often viewed as archetypal G-protein coupled receptors. Over the past fifteen years, investigations in cardiovascular biology have provided remarkable insights into this receptor family. These studies have shifted pharmacological dogma, from one which centralized the receptor to a new focus on structural micro-domains such as caveolae and t-tubules. Important studies have examined, separately, the structural compartmentation of ion channels and βAR. Despite links being assumed, relatively few studies have specifically examined the direct link between structural remodeling and electrical remodeling with a focus on βAR. In this review, we will examine the nature of receptor and ion channel dysfunction on a substrate of cardiomyocyte microdomain remodeling, as well as the likely ramifications for cardiac electrophysiology. We will then discuss the advances in methodologies in this area with a specific focus on super-resolution microscopy, fluorescent imaging, and new approaches involving microdomain specific, polymer-based agonists. The advent of powerful computational modelling approaches has allowed the science to shift from purely empirical work, and may allow future investigations based on prediction. Issues such as the cross-reactivity of receptors and cellular heterogeneity will also be discussed. Finally, we will speculate as to the potential developments within this field over the next ten years.
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  • 文章类型: Journal Article
    响应于葡萄糖触发胰岛素释放的胞浆Ca2浓度([Ca2]i)的电活动和振荡是胰腺β细胞的关键功能。尽管振荡的Ca2+信号在β细胞中被深入研究,它们较低的频率与电活动的频率不匹配。此外,在活细胞实验中,测得的峰值[Ca2+]i未达到突触素所需的水平。因此,我们试图解决质膜下微结构域中的Ca2动力学,这对于触发快速胞吐至关重要。应用全内反射荧光(TIRF)显微镜在产生胰岛素的INS-1E和原代小鼠β细胞,我们解决了响应于葡萄糖暴露的Ca2+尖峰(频率>3s-1)的异常快速序列。使用低亲和力[Ca2+]i指示剂染料,我们提供了实验证据,表明Ca2尖峰在质膜附近达到了低的微摩尔表观浓度。通过重复去极化10ms引起的Ca2尖峰的分析与施用葡萄糖时观察到的Ca2动力学紧密匹配。据我们所知,这是第一个通过实验证明β细胞中Ca2峰值的研究,其速度类似于非补丁细胞中爆发或连续出现的动作电位(AP)序列。
    Electrical activity and oscillations of cytosolic Ca2+ concentrations ([Ca2+]i) that trigger insulin release in response to glucose are key functions of pancreatic β cells. Although oscillatory Ca2+ signals have been intensively studied in β cells, their lower frequency did not match that of electrical activity. In addition, the measured peak [Ca2+]i did not reach levels that are typically required by synaptotagmins to elicit the release of insulin-containing vesicles in live-cell experiments. We therefore sought to resolve the Ca2+ dynamics in the subplasmalemmal microdomain that is critical for triggering fast exocytosis. Applying total internal reflection fluorescence (TIRF) microscopy in insulin-producing INS-1E and primary mouse β cells, we resolved extraordinary fast trains of Ca2+ spiking (frequency > 3 s-1) in response to glucose exposure. Using a low-affinity [Ca2+]i indicator dye, we provide experimental evidence that Ca2+ spikes reach low micromolar apparent concentrations in the vicinity of the plasma membrane. Analysis of Ca2+ spikes evoked by repeated depolarization for 10 ms closely matched the Ca2+ dynamics observed upon glucose application. To our knowledge, this is the first study that experimentally demonstrates Ca2+ spikes in β cells with velocities that resemble those of bursting or continuously appearing trains of action potentials (APs) in non-patched cells.
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  • 文章类型: Journal Article
    Light plays an essential role in photosynthesis; however, its excess can cause damage to cellular components. Photosynthetic organisms thus developed a set of photoprotective mechanisms (e.g., non-photochemical quenching, photoinhibition) that can be studied by a classic biochemical and biophysical methods in cell suspension. Here, we combined these bulk methods with single-cell identification of microdomains in thylakoid membrane during high-light (HL) stress. We used Synechocystis sp. PCC 6803 cells with YFP tagged photosystem I. The single-cell data pointed to a three-phase response of cells to acute HL stress. We defined: (1) fast response phase (0-30 min), (2) intermediate phase (30-120 min), and (3) slow acclimation phase (120-360 min). During the first phase, cyanobacterial cells activated photoprotective mechanisms such as photoinhibition and non-photochemical quenching. Later on (during the second phase), we temporarily observed functional decoupling of phycobilisomes and sustained monomerization of photosystem II dimer. Simultaneously, cells also initiated accumulation of carotenoids, especially ɣ-carotene, the main precursor of all carotenoids. In the last phase, in addition to ɣ-carotene, we also observed accumulation of myxoxanthophyll and more even spatial distribution of photosystems and phycobilisomes between microdomains. We suggest that the overall carotenoid increase during HL stress could be involved either in the direct photoprotection (e.g., in ROS scavenging) and/or could play an additional role in maintaining optimal distribution of photosystems in thylakoid membrane to attain efficient photoprotection.
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