Non-covalent

非共价
  • 文章类型: Journal Article
    金属离子执行各种各样的功能,包括酸碱/氧化还原催化,结构功能,信令,和电子传输。了解过渡金属配合物与生物大分子的相互作用对生物学至关重要。药物化学,以及合成金属酶的生产。顺铂偶然发现后,金属络合物在生物化学中的重要性成为探究的重中之重。在这次审查中,对第一行过渡金属络合物的各种合成策略及其通过非共价结合与DNA的相互作用进行了十年的更新。此外,这项工作对理论和实践方法的有效性进行了出色的分析,以系统地生成用于抗癌治疗的新型非铂类金属药物。
    Metal ions carry out a wide variety of functions, including acid-base/redox catalysis, structural functions, signaling, and electron transport. Understanding the interactions of transition metal complexes with biomacromolecules is essential for biology, medicinal chemistry, and the production of synthetic metalloenzymes. After the coincidental discovery of cisplatin, importance of the metal complexes in biochemistry became a top priority for inquiry. In this review, a decade update on various synthetic strategies to first row transition metal complex and their interaction with DNA through non-covalent binding are explored. Moreover, this effort provides an excellent analysis on the efficacy of theoretical and practical approaches to the systematic generation of new non-platinum based metallodrugs for anti-cancer therapeutics.
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  • 文章类型: Journal Article
    添加多酚以提高功能蛋白的吸收已成为研究热点。绿原酸是一种具有抗炎作用的天然植物多酚,抗氧化剂,和抗癌特性。牛乳铁蛋白以其免疫调节而闻名,抗癌,抗菌,和铁螯合性能。因此,研究了在中性条件下不同浓度绿原酸(CA)与牛乳铁蛋白(BLF)的非共价结合。通过漆酶催化将CA接枝到乳铁蛋白分子上,自由基接枝,和碱处理。通过实验测试和理论预测分析了CA-BLF非共价和共价复合物的形成机理。与控制BLF相比,非共价复合物中BLF的二级结构被重排和展开,以提供更多的活性位点,共价缀合物的三级结构被改变,蛋白质的氨基参与了共价反应。添加CA后,共价缀合物具有更好的功能活性。这些乳铁蛋白-多酚偶联物可以携带各种生物活性化合物以产生用于包封的乳基递送系统。
    Adding polyphenols to improve the absorption of functional proteins has become a hot topic. Chlorogenic acid is a natural plant polyphenol with anti-inflammatory, antioxidant, and anticancer properties. Bovine lactoferrin is known for its immunomodulatory, anticancer, antibacterial, and iron-chelating properties. Therefore, the non-covalent binding of chlorogenic acid (CA) and bovine lactoferrin (BLF) with different concentrations under neutral conditions was studied. CA was grafted onto lactoferrin molecules by laccase catalysis, free radical grafting, and alkali treatment. The formation mechanism of non-covalent and covalent complexes of CA-BLF was analyzed by experimental test and theoretical prediction. Compared with the control BLF, the secondary structure of BLF in the non-covalent complex was rearranged and unfolded to provide more active sites, the tertiary structure of the covalent conjugate was changed, and the amino group of the protein participated in the covalent reaction. After adding CA, the covalent conjugates have better functional activity. These lactoferrin-polyphenol couplings can carry various bioactive compounds to create milk-based delivery systems for encapsulation.
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  • 尽管Warburg在近100年前发现了肿瘤和正常组织之间的pH差异,在最初的70年中,开发利用这一概念的疗法相对较慢。在过去的30年里,低分子量药物和纳米颗粒对pH依赖性策略的使用呈指数增长.两种经常讨论的方法是化学疗法从大分子的pH敏感共价连接或从带电聚合物纳米颗粒的pH依赖性破坏释放。相比之下,很少讨论化疗药物和大分子之间的pH依赖性非共价键,然而,这种被低估的战略有很大的潜力。这些非共价相互作用主要是离子键或氢键,具有来自疏水键的支持作用。除了药物与载体的容易偶联外,这些非共价相互作用可能显示出显著的pH依赖性。与pH依赖性一致,这些载药载体中的许多在体外表现出显著的作用,在某些情况下,惊人的体内活动。在这次审查中,我们将专注于pH敏感的非共价键,突出药物从不同的载体如四面体DNA结构的释放,环糊精,聚合物载体,和碳基量子粒子.
    Although Warburg discovered pH discrepancies between tumor and normal tissues nearly 100 years ago, developing therapies to take advantage of this concept was relatively slow for the first 70 years. During the last 30 years, there has been an exponential increase in the use of pH-dependent strategies for both low molecular weight drugs and nanoparticles. Two frequently discussed approaches are the chemotherapy\'s release from pH-sensitive covalent linkages of macromolecules or from pH-dependent disruption of charged polymeric nanoparticles. In contrast, pH-dependent non-covalent bonds between the chemotherapy agent and macromolecules have rarely been discussed, yet this underappreciated strategy has great potential. These non-covalent interactions are primarily ionic or hydrogen bonds with supporting roles from hydrophobic bonds. In addition to the facile coupling of the drug with the carrier, these non-covalent interactions may show marked pH dependence. Consistent with pH dependence, many of these drug-loaded carriers showed significant in vitro and, in some cases, striking in vivo activity. In this review, we will focus on pH-sensitive non-covalent bonds, highlighting the release of drugs from diverse carriers such as tetrahedron DNA structures, cyclodextrin, polymeric carriers, and carbon-based quantum particles.
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  • 文章类型: Journal Article
    目的:为全面审查药代动力学,药效学,安全,和新的食品和药物管理局(FDA)批准布鲁顿酪氨酸激酶抑制剂(BTKi)的疗效,吡托替尼治疗复发/难治性套细胞淋巴瘤(r/rMCL)。
    方法:通过PubMedMEDLINE进行文献检索,ClinicalTrials.gov,和FDA网站(2018年1月至2023年1月)使用以下关键术语:淋巴瘤,非共价的,布鲁顿酪氨酸激酶(BTK),和复发。相关英文专著,研究,并对在人类中进行的摘要进行了审查和考虑。
    方法:皮尔托布鲁替尼,一种新的非共价BTKi,1月27日获得r/rMCL治疗加速批准,2023年,基于开放标签,多中心1/2期BRUIN试验。在阶段l,61例r/rMCL患者接受了7个剂量水平的吡托布鲁替尼(25-300mg)。在该研究期间没有报告最大耐受剂量或剂量限制性毒性。在第2阶段,56例r/rMCL可评估疗效的患者每天接受吡托布鲁替尼200mg。总有效率(ORR)为52%(95%CI38-65)。此外,先前接受共价BTKi的患者,ORR为52%(95%CI38-66)。中性粒细胞减少症是最常见的不良反应,报告为3级或更高。
    结论:Pirtobrutinib已证明在严重预处理的r/rMCL成年患者中具有安全性和有效性。该药物的优点包括其在恶性肿瘤对当前BTKi耐药的患者中的使用,耐受性,和回应率。多项临床试验正在进行中,以确定吡托替尼在其他B细胞恶性肿瘤中的疗效。
    OBJECTIVE: To provide a comprehensive review of the pharmacokinetics, pharmacodynamics, safety, and efficacy of a new Food and Drug Administration (FDA) approved Bruton\'s tyrosine kinase inhibitor (BTKi), pirtobrutinib for relapsed/refractory mantle cell lymphoma (r/r MCL).
    METHODS: A literature search was conducted through PubMed MEDLINE, ClinicalTrials.gov, and the FDA website (January 2018-January 2023) using the following key terms: lymphoma, non-covalent, Bruton\'s tyrosine kinase (BTK), and relapse. Relevant English language monographs, studies, and abstracts conducted in humans were reviewed and considered.
    METHODS: Pirtobrutinib, a novel non-covalent BTKi, was granted accelerated approval for treatment of r/r MCL on January 27th, 2023, based on an open-label, multi-center phase 1/2 BRUIN trial. In phase l, 61 patients with r/r MCL received seven dose levels of pirtobrutinib (25-300 mg). There was no reported maximum tolerated dose or dose-limiting toxicities during this study period. In phase 2, 56 r/r MCL evaluable efficacy patients received pirtobrutinib 200 mg daily. The overall response rate (ORR) was 52% (95% CI 38-65). Additionally, patients who received a previous covalent BTKi, ORR was 52% (95% CI 38-66). Neutropenia was the most common adverse reaction reported as a grade 3 or higher.
    CONCLUSIONS: Pirtobrutinib has demonstrated safety and efficacy in heavily pre-treated adult patients with r/r MCL. Advantages of this drug include its usage in patients whose malignancy is resistant to current BTKi, tolerability, and response rate. Multiple clinical trials are underway to determine the efficacy of pirtobrutinib in other B-cell malignancies.
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  • 文章类型: Journal Article
    由于缺乏用于全身递送的有效方法,潜在重要的候选药物经常面临从考虑中排除。这些候选物的溶解性差对它们作为口服丸剂或注射剂的发展构成了主要障碍。氯硝柳胺,以宿主为导向的抗病毒药物,将是最好的例子。在这项研究中,我们已经开发了一种纳米制剂技术,该技术允许氯硝柳胺与胆酸的非共价制剂。该制剂能够通过胆汁酸包被的纳米颗粒的内吞作用和肠肝循环进行有效的全身递送。氯硝柳胺纳米粒(NDN)的口服生物利用度显著提高到38.3%,与纯氯硝柳胺相比增加了八倍。因此,NDN制剂中氯硝柳胺的血浆浓度达到1,179.6ng/mL,比治疗血浆水平高11倍。血浆水平的这种实质性增加有助于感染SARS-CoV-2的动物的临床症状的完全缓解。我们的纳米制剂不仅为SARS-CoV-2提供了一种可口服递送的抗病毒药物,具有改善的药物生物利用度,而且还为潜在的重要候选药物所面临的全身递送挑战提供了解决方案。
    Potentially significant drug candidates often face elimination from consideration due to the lack of an effective method for systemic delivery. The poor solubility of these candidates has posed a major obstacle for their development as oral pills or injectables. Niclosamide, a host-directed antiviral, is a good example. In this study, a nanoformulation technology that allows for the non-covalent formulation of niclosamide with cholic acids was developed. This formulation enables efficient systemic delivery through endocytosis and enterohepatic circulation of bile-acid-coated nanoparticles. The oral bioavailability of niclosamide-delivery nanoparticles (NDNs) was significantly enhanced to 38.3%, representing an eight-fold increase compared with pure niclosamide. Consequently, the plasma concentration of niclosamide for the NDN formulation reached 1179.6 ng/mL, which is 11 times higher than the therapeutic plasma level. This substantial increase in plasma level contributed to the complete resolution of clinical symptoms in animals infected with severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). This nanoformulation not only provides an orally deliverable antiviral drug for SARS-CoV-2 with improved pharmaceutical bioavailability, but also offers a solution to the systemic delivery challenges faced by potentially significant drug candidates.
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  • 文章类型: Journal Article
    多酚具有广泛接受的健康益处,这些益处受到其低摄取的限制,低生物利用度,在肠道中快速降解。虽然牛奶蛋白是多酚的极好载体,多酚与乳蛋白的特定相互作用,需要理解为促进这些递送系统在食品和药物应用中的利用。我们已经评估了影响乳蛋白-多酚相互作用的不同因素的相关性以及对多酚的生物利用度和健康促进方面的后续影响。疏水性力是多酚与乳蛋白的主要结合力。影响相互作用和结合亲和力的重要因素是多酚的分子量和疏水性。与牛奶蛋白相比,多酚与牛奶蛋白的相互作用提高了抗氧化活性,而与多酚的比较存在矛盾的结果。体外和细胞系研究表明,在存在乳蛋白的情况下,多酚的生物利用度提高,以及更高的抗癌和抗过敏益处。总的来说,这项工作将为更好地理解多酚与乳蛋白的相互作用铺平道路,并通过可持续的绿色过程来定制复合物,使多酚在食品和药物应用中具有更高的生物利用度和健康促进作用。
    Polyphenols have widely accepted health benefits which are limited by their low uptake, low bioavailability, and rapid degradation in the gut. While milk proteins are excellent carriers for polyphenols, the specific interactions of the polyphenols with the milk proteins, need to be understood to facilitate the utilization of these delivery systems in food and pharmaceutical applications. We have evaluated the relevance of different factors affecting milk protein-polyphenol interactions and the subsequent impact on the bioavailability and health promoting aspects of polyphenols. Hydrophobic forces are the primary binding forces of polyphenols to milk proteins. The significant factors affecting the interactions and binding affinity are the molecular weight and the hydrophobicity of the polyphenols. The interaction of polyphenols with milk proteins improved the antioxidant activity in comparison to milk proteins, while conflicting results exists for comparisons with polyphenols. In-vitro and cell line studies demonstrated enhanced bioavailability of polyphenols in the presence of milk proteins as well as higher anti-cancer and anti-allergy benefits. Overall, this work will pave the way for better understanding of polyphenol interactions with milk proteins and enable the tailoring of complexes through sustainable green processes, enabling higher bioavailability and health promoting effects of the polyphenols in food and pharmaceutical applications.
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  • 文章类型: Journal Article
    由于抗生素的非有效使用和严重细菌感染的增加,最近促进了抗菌药物的开发。由于对药物具有抗性的细菌的流行,抗微生物疗法替代方案的有效性受到限制。我们目前研究的目标是将金属化合物用于抗生素递送,以提高抗菌方案的有效性。由于其生物活性,琥珀酸钾-琥珀酸是优选的,因为一般来说,琥珀酸化合物具有最大的抗微生物感染的潜力和天然抗生素,因为它的相对酸性性质。在目前的研究中,分子几何形状,带隙能量,将分子的静电相互作用和势能分布与某些琥珀酸酯衍生物进行了比较。使用FT-IR和FT-Raman分析探测了潜在的化合物琥珀酸钾琥珀酸。通过法线坐标分析,改进了具有势能分布的不同振动模式的振动分配。使用NBO分析研究了对生物活性非常重要的化学键稳定性。分子对接研究表明,该分子具有抗菌作用,并显示出-5.3kcal/mol的最小结合能,可用于预防任何细菌性疾病。从我们的研究结果来看,根据FMO的研究,这种材料将是稳定和生物活性的,这表明了4.35eV的带隙值和分子的药代动力学特征,使用ADMET因子和药物相似度测试进行预测。由RamaswamyH.Sarma沟通。
    The development of antibacterial medications has recently been promoted due to the non- effective usage of antibiotics and the rise in severe bacterial infections. The effectiveness of antimicrobial therapy alternatives is constrained due to the prevalence of germs that are resistant to medications. Our current study\'s goal is to favor metallic compounds for antibiotic delivery in order to increase the effectiveness of the antibacterial regimen. Due to its bioactivity, potassium succinate-succinic acid is preferred because in general, the succinic acid compound has the greatest potential against microbial infections and a natural antibiotic because of its relative acidic nature. In the current study, the molecular geometry, band gap energies, molecular electrostatic interactions and potential energy distribution of the molecule were compared with those of certain succinate derivatives. The potential compound potassium succinate succinic acid was probed using FT-IR and FT-Raman analyses. Vibrational assignments pertaining to different modes of vibration with potential energy distribution have been improved by normal coordinate analysis. The chemical bond stability which is largely important for biological activity is studied using NBO analysis. The molecular docking study suggests that the molecule possesses antibacterial action and displays a minimal binding energy of -5.3 kcal/mol which can be endorsed for the prevention of any bacterial illness. From the results of our studies, the material would be stable and bioactive according to the FMO study, which indicates a band gap value of 4.35 eV and the pharmacokinetic features of the molecule, was predicted using the ADMET factors and the drug-likeness test.Communicated by Ramaswamy H. Sarma.
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  • 文章类型: Journal Article
    使用纳米级尺寸的金属基底,表面增强拉曼散射(SERS)是一种增强生物分子拉曼信号的技术。包括传感材料在内的众多行业,吸附和医疗设备,使用纳米材料,如纳米笼和纳米簇。为了发现一种可能的新型传感器平台,包括一个小的金属簇和一个弯曲的刚性基板,我们使用密度泛函理论(DFT)模拟来探索甘脲(GLC)的吸附,一种潜在的药物中间体,在纯氧化镁笼(Mg12O12)上。该明确定义的笼用作(i)可以使用的确切可能结构以及(ii)MgO纳米结构的一般模型。我们还研究了单Al掺杂的Mg12O12纳米笼版本Mg11AlO12。所有计算均在理论的M06-2X水平进行。GLC通过强的供体-受体相互作用与Mg12O12纳米笼结合。吸附释放-45.80kcalmol-1的能量。由于铝掺杂,GLC-Mg11AlO12的能隙(1.91eV)从GLC-Mg12O12的能隙(4.28eV)减小,因此GLC-Mg11AlO12的电导率增加。纳米笼电导率的电子变化可以转化为电信号,该电信号可以用于检测药物分析物的存在。此外,当GLC分子存在时,纳米笼的功函数也降低。MgO纳米笼,我们得出结论,是一个功函数类型以及可能的电子传感器GLC药物检测。与Mg12O12恢复时间相比,从Mg11AlO12表面的GLC解吸恢复得更快。进行本研究中评估的AIM和NCI以帮助分析复合物的电子结构。我们的发现为Mg11AlO12纳米结构用于药物识别铺平了道路。
    Using metal substrates that are nanoscale in size, surface-enhanced Raman scattering (SERS) is a technique for enhancing the Raman signal of biomolecules. Numerous industries including sensing materials, adsorption and medical devices, use nanomaterials like nanocages and nanoclusters. To discover a possible novel sensor platform involving a small metal cluster and a curved rigid substrate, we used density functional theoretical (DFT) simulations to explore the adsorption of glycoluril (GLC), a prospective drug intermediate, on a pure magnesium oxide cage (Mg12O12). This well defined cage was used as (i) an exact probable structure that could be used as well as (ii) a general model for MgO nanostructures. We also investigated the mono Al-doped Mg12O12 nanocage version Mg11AlO12. All computations were performed at the M06-2X level of theory. The GLC binds to the Mg12O12 nanocage by way of strong donor-acceptor interactions. The adsorption is releasing - 45.80 kcal mol-1 of energy. Due to Al doping, the energy gap of GLC-Mg11AlO12 (1.91 eV) is reduced from that of GLC-Mg12O12 (4.28 eV) and hence there is an increase in electrical conductivity of GLC-Mg11AlO12. The electronic change in the nanocage\'s conductivity can be transformed into an electrical signal which can be used to detect the presence of the drug analyte. In addition, when a GLC molecule is present, the work function of the nanocage is also reduced. The MgO nanocage, we conclude, is a work function type as well as a possible electronic sensor for GLC drug detection. GLC desorption from the Mg11AlO12 surface recovers more quickly in comparison with Mg12O12 recovery time. The AIM and NCIs assessed in this study were performed to help analyze the electronic structures of the complexes. Our findings pave the possibility for Mg11AlO12 nanostructures to be used in drug recognition.
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  • 文章类型: Journal Article
    天然存在的香豆素蛇床子素具有止痒特性,和最近的报道表明,这种作用是由于阳离子通道TRPV1和TRPV3的抑制或脱敏。还建议蛇床子素激活TRPA1,这种作用应该是瘙痒而不是止痒。在这里,我们通过比率钙成像和膜片钳电生理学表征了蛇床子素对TRPA1的影响。在表达人(h)TRPA1的HEK293中,蛇床子素诱导细胞内钙的浓度依赖性增加,其被TRPA1-抑制剂A967079抑制。在小鼠背根神经节(DRG)细胞中,蛇床子素诱导了强烈的钙内流,部分由TRPA1介导。蛇床子素在整个细胞中引起完全可逆的膜电流,以及在hTRPA1上无细胞的内向外记录。蛇床子素未能激活突变体hTRPA1-S873V/T874L,先前描述的非亲电TRPA1-激动剂薄荷醇和香芹酚的结合位点。蛇床子素和香芹酚的联合应用减少了通道的激活,暗示竞争约束力。最后,蛇床子素未能激活TRPM8和TRPV4,但诱导了HEK293细胞中表达的hTRPV1的适度激活。我们得出结论,蛇床子素是TRPA1的有效非亲电激动剂。这种性质与止痒作用的相关性需要进一步探讨。
    The naturally occurring coumarin osthole has antipruritic properties, and recent reports suggest that this effect is due an inhibition or desensitization of the cation channels TRPV1 and TRPV3. Osthole was also suggested to activate TRPA1, an effect that should rather be pruritic than antipruritic. Here we characterized the effects of osthole on TRPA1 by means of ratiometric calcium imaging and patch clamp electrophysiology. In HEK 293 expressing human (h) TRPA1, osthole induced a concentration-dependent increase in intracellular calcium that was inhibited by the TRPA1-inhibitor A967079. In mouse dorsal root ganglion (DRG) cells, osthole induced a strong calcium-influx that was partly mediated by TRPA1. Osthole evoked fully reversible membrane currents in whole-cell as well as cell-free inside-out recordings on hTRPA1. Osthole failed to activate the mutant hTRPA1-S873V/T874L, a previously described binding site for the non-electrophilic TRPA1-agonists menthol and carvacrol. The combined application of osthole and carvacrol diminished channel activation, suggesting a competitive binding. Finally, osthole failed to activate TRPM8 and TRPV4 but induced a modest activation of hTRPV1 expressed in HEK 293 cells. We conclude that osthole is a potent non-electrophilic agonist of TRPA1. The relevance of this property for the antipruritic effects needs to be further explored.
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  • 文章类型: Journal Article
    本文的目的是通过共价和非共价组合研究(-)-表没食子儿茶素-3-没食子酸酯(EGCG)与乳清分离蛋白(WPI)之间的相互作用,以及相互作用对构象和功能变化的影响。乳清蛋白。使用FTIR光谱研究了各种EGCG浓度下乳清蛋白二级结构的构象变化。当与乳清蛋白相互作用时,EGCG与非共价键更可能形成共价键。EGCG的加入改变了乳清蛋白的构象。β-折叠的含量下降,而β转角增加,然而,随机线圈保持不变。在所有WPI-EGCG复合物中观察到表面疏水性的降低,提示EGCG诱导了WPI二级结构的修饰。此外,与EGCG相互作用后,WPI的乳化和起泡特性得到增强。本研讨证实EGCG可以增进WPI的机能性质。这也是WPI-EGCG复合物在乳制品行业中可能应用的指针。
    The objective of this paper was to investigate the interactions between (-)-Epigallocatechin-3-gallate (EGCG) and whey protein isolate (WPI) by covalent and non-covalent combinations and the effects of the interactions on the conformational and functional changes of whey protein. Conformational changes in the secondary structure of whey protein with various concentrations of EGCG were studied using FTIR spectra. EGCG was more likely to form covalent bonds than non-covalent bonds when it interacted with whey proteins. The addition of EGCG altered the conformation of whey protein. The content of β-sheet decreased, while that of β-turn increased, however, the random coil remained unchanged. An reduction in surface hydrophobicity was observed in all the WPI-EGCG complexes, suggesting that modification in secondary structure of WPI were induced by EGCG. Additionally, the emulsifying and foaming attributes of WPI were enhanced after interaction with EGCG. This study confirms that EGCG can enhance the functional properties of WPI. It is also a pointer to the possible application of WPI-EGCG complexes in the dairy industry.
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