Non-covalent

非共价
  • 文章类型: Journal Article
    添加多酚以提高功能蛋白的吸收已成为研究热点。绿原酸是一种具有抗炎作用的天然植物多酚,抗氧化剂,和抗癌特性。牛乳铁蛋白以其免疫调节而闻名,抗癌,抗菌,和铁螯合性能。因此,研究了在中性条件下不同浓度绿原酸(CA)与牛乳铁蛋白(BLF)的非共价结合。通过漆酶催化将CA接枝到乳铁蛋白分子上,自由基接枝,和碱处理。通过实验测试和理论预测分析了CA-BLF非共价和共价复合物的形成机理。与控制BLF相比,非共价复合物中BLF的二级结构被重排和展开,以提供更多的活性位点,共价缀合物的三级结构被改变,蛋白质的氨基参与了共价反应。添加CA后,共价缀合物具有更好的功能活性。这些乳铁蛋白-多酚偶联物可以携带各种生物活性化合物以产生用于包封的乳基递送系统。
    Adding polyphenols to improve the absorption of functional proteins has become a hot topic. Chlorogenic acid is a natural plant polyphenol with anti-inflammatory, antioxidant, and anticancer properties. Bovine lactoferrin is known for its immunomodulatory, anticancer, antibacterial, and iron-chelating properties. Therefore, the non-covalent binding of chlorogenic acid (CA) and bovine lactoferrin (BLF) with different concentrations under neutral conditions was studied. CA was grafted onto lactoferrin molecules by laccase catalysis, free radical grafting, and alkali treatment. The formation mechanism of non-covalent and covalent complexes of CA-BLF was analyzed by experimental test and theoretical prediction. Compared with the control BLF, the secondary structure of BLF in the non-covalent complex was rearranged and unfolded to provide more active sites, the tertiary structure of the covalent conjugate was changed, and the amino group of the protein participated in the covalent reaction. After adding CA, the covalent conjugates have better functional activity. These lactoferrin-polyphenol couplings can carry various bioactive compounds to create milk-based delivery systems for encapsulation.
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  • 尽管Warburg在近100年前发现了肿瘤和正常组织之间的pH差异,在最初的70年中,开发利用这一概念的疗法相对较慢。在过去的30年里,低分子量药物和纳米颗粒对pH依赖性策略的使用呈指数增长.两种经常讨论的方法是化学疗法从大分子的pH敏感共价连接或从带电聚合物纳米颗粒的pH依赖性破坏释放。相比之下,很少讨论化疗药物和大分子之间的pH依赖性非共价键,然而,这种被低估的战略有很大的潜力。这些非共价相互作用主要是离子键或氢键,具有来自疏水键的支持作用。除了药物与载体的容易偶联外,这些非共价相互作用可能显示出显著的pH依赖性。与pH依赖性一致,这些载药载体中的许多在体外表现出显著的作用,在某些情况下,惊人的体内活动。在这次审查中,我们将专注于pH敏感的非共价键,突出药物从不同的载体如四面体DNA结构的释放,环糊精,聚合物载体,和碳基量子粒子.
    Although Warburg discovered pH discrepancies between tumor and normal tissues nearly 100 years ago, developing therapies to take advantage of this concept was relatively slow for the first 70 years. During the last 30 years, there has been an exponential increase in the use of pH-dependent strategies for both low molecular weight drugs and nanoparticles. Two frequently discussed approaches are the chemotherapy\'s release from pH-sensitive covalent linkages of macromolecules or from pH-dependent disruption of charged polymeric nanoparticles. In contrast, pH-dependent non-covalent bonds between the chemotherapy agent and macromolecules have rarely been discussed, yet this underappreciated strategy has great potential. These non-covalent interactions are primarily ionic or hydrogen bonds with supporting roles from hydrophobic bonds. In addition to the facile coupling of the drug with the carrier, these non-covalent interactions may show marked pH dependence. Consistent with pH dependence, many of these drug-loaded carriers showed significant in vitro and, in some cases, striking in vivo activity. In this review, we will focus on pH-sensitive non-covalent bonds, highlighting the release of drugs from diverse carriers such as tetrahedron DNA structures, cyclodextrin, polymeric carriers, and carbon-based quantum particles.
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  • 文章类型: Journal Article
    使用纳米级尺寸的金属基底,表面增强拉曼散射(SERS)是一种增强生物分子拉曼信号的技术。包括传感材料在内的众多行业,吸附和医疗设备,使用纳米材料,如纳米笼和纳米簇。为了发现一种可能的新型传感器平台,包括一个小的金属簇和一个弯曲的刚性基板,我们使用密度泛函理论(DFT)模拟来探索甘脲(GLC)的吸附,一种潜在的药物中间体,在纯氧化镁笼(Mg12O12)上。该明确定义的笼用作(i)可以使用的确切可能结构以及(ii)MgO纳米结构的一般模型。我们还研究了单Al掺杂的Mg12O12纳米笼版本Mg11AlO12。所有计算均在理论的M06-2X水平进行。GLC通过强的供体-受体相互作用与Mg12O12纳米笼结合。吸附释放-45.80kcalmol-1的能量。由于铝掺杂,GLC-Mg11AlO12的能隙(1.91eV)从GLC-Mg12O12的能隙(4.28eV)减小,因此GLC-Mg11AlO12的电导率增加。纳米笼电导率的电子变化可以转化为电信号,该电信号可以用于检测药物分析物的存在。此外,当GLC分子存在时,纳米笼的功函数也降低。MgO纳米笼,我们得出结论,是一个功函数类型以及可能的电子传感器GLC药物检测。与Mg12O12恢复时间相比,从Mg11AlO12表面的GLC解吸恢复得更快。进行本研究中评估的AIM和NCI以帮助分析复合物的电子结构。我们的发现为Mg11AlO12纳米结构用于药物识别铺平了道路。
    Using metal substrates that are nanoscale in size, surface-enhanced Raman scattering (SERS) is a technique for enhancing the Raman signal of biomolecules. Numerous industries including sensing materials, adsorption and medical devices, use nanomaterials like nanocages and nanoclusters. To discover a possible novel sensor platform involving a small metal cluster and a curved rigid substrate, we used density functional theoretical (DFT) simulations to explore the adsorption of glycoluril (GLC), a prospective drug intermediate, on a pure magnesium oxide cage (Mg12O12). This well defined cage was used as (i) an exact probable structure that could be used as well as (ii) a general model for MgO nanostructures. We also investigated the mono Al-doped Mg12O12 nanocage version Mg11AlO12. All computations were performed at the M06-2X level of theory. The GLC binds to the Mg12O12 nanocage by way of strong donor-acceptor interactions. The adsorption is releasing - 45.80 kcal mol-1 of energy. Due to Al doping, the energy gap of GLC-Mg11AlO12 (1.91 eV) is reduced from that of GLC-Mg12O12 (4.28 eV) and hence there is an increase in electrical conductivity of GLC-Mg11AlO12. The electronic change in the nanocage\'s conductivity can be transformed into an electrical signal which can be used to detect the presence of the drug analyte. In addition, when a GLC molecule is present, the work function of the nanocage is also reduced. The MgO nanocage, we conclude, is a work function type as well as a possible electronic sensor for GLC drug detection. GLC desorption from the Mg11AlO12 surface recovers more quickly in comparison with Mg12O12 recovery time. The AIM and NCIs assessed in this study were performed to help analyze the electronic structures of the complexes. Our findings pave the possibility for Mg11AlO12 nanostructures to be used in drug recognition.
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  • 文章类型: Journal Article
    过渡金属二硫属化合物(TMDC)由于其优异的物理和化学性质而被广泛用于生物传感应用。由于生物材料靶标的特性,生物传感器目前面临的最大挑战是如何提高灵敏度和稳定性。已经使用了许多材料来增强目标信号。其中,TMDC在增强生物传感信号方面表现出优异的性能,因为它们具有金属和半导电的电学功能,可调带隙,大的比表面积等。这里,本文综述了基于TMDC的生物传感器的不同功能化方法和研究进展。用于生物传感器制造的TMDC的修饰方法主要包括两种策略:非共价和共价相互作用。文章总结了不同修饰策略的优缺点及其对生物传感性能的影响。作者提出了TMDC在生物传感器应用中需要解决的挑战和问题。最后,该综述表达了基于TMDC的生物传感器在未来的积极应用前景。
    Transition metal dichalcogenides (TMDCs) are widely used in biosensing applications due to their excellent physical and chemical properties. Due to the properties of biomaterial targets, the biggest challenge that biosensors face now is how to improve the sensitivity and stability. A lot of materials had been used to enhance the target signal. Among them, TMDCs show excellent performance in enhancing biosensing signals because of their metallic and semi-conducting electrical capabilities, tunable band gap, large specific surface area and so on. Here, we review different functionalization methods and research progress of TMDCs-based biosensors. The modification methods of TMDCs for biosensor fabrication mainly include two strategies: non-covalent and covalent interaction. The article summarizes the advantages and disadvantages of different modification strategies and their effects on biosensing performance. The authors present the challenges and issues that TMDCs need to be addressed in biosensor applications. Finally, the review expresses the positive application prospects of TMDCs-based biosensors in the future.
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  • 文章类型: Journal Article
    布鲁顿酪氨酸激酶(BTK)是B细胞受体(BCR)的关键下游信号元件,在B细胞癌中已被不可逆的有效抑制,共价抑制剂包括依鲁替尼和阿卡拉布替尼。所有FDA批准的共价BTK抑制剂都依赖于与BTK活性位点内的半胱氨酸481(C481)氨基酸的结合,从而使它变得惰性。虽然共价BTK抑制剂在多种B细胞恶性肿瘤中非常成功,在3期试验中,相对于化学免疫疗法,提高了总生存期和无进展生存期,它们可能受到不耐受和疾病进展的限制。皮尔托替尼是一部小说,高度选择性,和独立于C481结合的非共价BTK抑制剂,最近,在患有多种B细胞恶性肿瘤的复发/难治性患者中,首次人1/2期临床试验的耐受性非常好,并导致缓解.这里,我们回顾了寻求非共价BTK抑制剂的药理学原理,这种抑制剂的临床需要,现有安全,和吡托替尼的耐药机制数据,以及即将进行的旨在确定吡托布鲁替尼临床效用的临床试验,它有可能满足B细胞恶性肿瘤患者的多个未满足的临床需求。
    Bruton\'s tyrosine kinase (BTK) is a critical downstream signaling element from the B-cell receptor (BCR) that has been effectively inhibited in B-cell cancers by irreversible, covalent inhibitors including ibrutinib and acalabrutinib. All FDA-approved covalent BTK inhibitors rely on binding to the cysteine 481 (C481) amino acid within the active site of BTK, thus rendering it inert. While covalent BTK inhibitors have been very successful in multiple B-cell malignancies, improving both overall survival and progression-free survival relative to chemoimmunotherapy in phase 3 trials, they can be limited by intolerance and disease progression. Pirtobrutinib is a novel, highly selective, and non-covalent BTK inhibitor that binds independently of C481, and in a recent, first-in-human phase 1/2 clinical trial was shown to be extremely well tolerated and lead to remissions in relapsed/refractory patients with multiple B-cell malignancies. Here, we review the pharmacologic rationale for pursuing non-covalent BTK inhibitors, the clinical need for such inhibitors, existing safety, and resistance mechanism data for pirtobrutinib, and the forthcoming clinical trials that seek to define the clinical utility of pirtobrutinib, which has the potential to fulfill multiple areas of unmet clinical need for patients with B-cell malignancies.
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  • 文章类型: Journal Article
    The B-cell receptor signalling pathway plays a critical role in development of B-cell malignancies, and the central role of Bruton\'s tyrosine kinase (BTK) activation in this pathway provides compelling rationale for BTK inhibition as a therapeutic strategy for these conditions. Covalent BTK inhibitors (BTKi) have transformed the treatment landscape of B-cell malignancies, but adverse events and treatment resistance have emerged as therapeutic challenges, with the majority of patients eventually discontinuing treatment due to toxicity or disease progression. Non-covalent BTKi have alternative mechanisms of binding to BTK than covalent BTKi, and therefore offer a therapeutic alternative for patients with B-cell malignancies, including those who have been intolerant to, or experienced disease progression during treatment with a covalent BTKi. Here, we summarise the clinical data, adverse events and mechanisms of resistance observed with covalent BTKi and describe the emerging data for non-covalent BTKi as a novel treatment for B-cell malignancies.
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  • 文章类型: Journal Article
    Based on the interaction modes of the natural 20S proteasome inhibitors TMC-95A, we have previously discovered a dipeptide 1. To explore the SAR around compound 1, we designed and synthesized a series of dipeptides (8-38) with a fragment-based strategy. Among them, nine compounds showed significant inhibitory activities against the chymotrypsin-like activity of human 20S proteasome with IC50 values at the submicromolar level, which were comparable or even superior to the parent compound 1. Meanwhile, they displayed no significant inhibition against trypsin-like and caspase-like activities of 20S proteasome. The results suggested the feasibility to design dipeptides as novel and potent 20S proteasome inhibitors.[Formula: see text].
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  • 文章类型: Journal Article
    Ibrutinib是BTK靶向的不可逆抑制剂。在这项研究中,我们证明,通过质谱和晶体学,依鲁替尼以非共价方式有效抑制SRC活性.S345C突变使SRC与依鲁替尼共价结合,并恢复伊布替尼对看门人突变体的效力。依鲁替尼/SRC的共晶结构显示SRC的Ser345未与依鲁替尼形成共价键,导致效力降低和克服SRC守门人突变的能力丧失。X射线晶体学研究还提供了结构见解,以了解为什么ibrutinib对不同激酶的看门人突变体表现不同。
    Ibrutinib is a BTK-targeted irreversible inhibitor. In this study, we demonstrate that ibrutinib potently inhibits SRC activity in a non-covalent manner via mass spectrometry and crystallography. The S345C mutation renders SRC to bind covalently with ibrutinib, and restores the potency of ibrutinib against the gatekeeper mutant. The co-crystal structure of ibrutinib/SRC shows Ser345 of SRC did not form covalent bond with ibrutinib, leading to a decrease of potency and loss of the ability to overcome the gatekeeper mutation of SRC. The X-ray crystallographic studies also provide structural insight into why ibrutinib behaves differently against gatekeeper mutants of different kinases.
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  • 文章类型: Journal Article
    The TRPA1 ion channel is activated by electrophilic compounds through the covalent modification of intracellular cysteine residues. How non-covalent agonists activate the channel and whether covalent and non-covalent agonists elicit the same physiological responses are not understood. Here, we report the discovery of a non-covalent agonist, GNE551, and determine a cryo-EM structure of the TRPA1-GNE551 complex, revealing a distinct binding pocket and ligand-interaction mechanism. Unlike the covalent agonist allyl isothiocyanate, which elicits channel desensitization, tachyphylaxis, and transient pain, GNE551 activates TRPA1 into a distinct conducting state without desensitization and induces persistent pain. Furthermore, GNE551-evoked pain is relatively insensitive to antagonist treatment. Thus, we demonstrate the biased agonism of TRPA1, a finding that has important implications for the discovery of effective drugs tailored to different disease etiologies.
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  • 文章类型: Journal Article
    基于石墨烯场效应晶体管(GFET)或电阻器设计的亲和生物传感器需要利用石墨烯的特殊电性能。因此,设计这些传感器时至关重要,石墨烯的电性能在整个功能化过程中得到保持。为此,非共价官能化可以优于共价修饰。滴注1,5-二氨基萘(DAN)是一种快速,简单的方法,用于碳基表面(如石墨烯)的非共价胺官能化。用于生物传感器的开发。在这项工作中,通过滴注法用DAN官能化多个石墨烯表面,导致胺部分,可用于随后连接到受体分子。使用X射线光电子能谱(XPS)证实了通过滴注法用DAN成功修饰石墨烯,拉曼光谱和实时电阻测量。使用上述技术也证实了受体分子的成功连接。此外,对生物传感器制造中所需的连续洗涤步骤的影响的调查,在DAN层的存在下,确认功能层没有被移除,即使在多次溶剂暴露后。因此,投丹是,一种用于生物传感器开发的石墨烯表面的胺官能化的可行的快速和稳健的方法。
    Affinity biosensors based on graphene field-effect transistor (GFET) or resistor designs require the utilization of graphene\'s exceptional electrical properties. Therefore, it is critical when designing these sensors, that the electrical properties of graphene are maintained throughout the functionalization process. To that end, non-covalent functionalization may be preferred over covalent modification. Drop-cast 1,5-diaminonaphthalene (DAN) was investigated as a quick and simple method for the non-covalent amine functionalization of carbon-based surfaces such as graphene, for use in biosensor development. In this work, multiple graphene surfaces were functionalized with DAN via a drop-cast method, leading to amine moieties, available for subsequent attachment to receptor molecules. Successful modification of graphene with DAN via a drop-cast method was confirmed using X-ray photoelectron spectroscopy (XPS), Raman spectroscopy and real-time resistance measurements. Successful attachment of receptor molecules also confirmed using the aforementioned techniques. Furthermore, an investigation into the effect of sequential wash steps which are required in biosensor manufacture, on the presence of the DAN layer, confirmed that the functional layer was not removed, even after multiple solvent exposures. Drop-cast DAN is thus, a viable fast and robust method for the amine functionalization of graphene surfaces for use in biosensor development.
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