Non-covalent

非共价
  • 文章类型: Journal Article
    添加多酚以提高功能蛋白的吸收已成为研究热点。绿原酸是一种具有抗炎作用的天然植物多酚,抗氧化剂,和抗癌特性。牛乳铁蛋白以其免疫调节而闻名,抗癌,抗菌,和铁螯合性能。因此,研究了在中性条件下不同浓度绿原酸(CA)与牛乳铁蛋白(BLF)的非共价结合。通过漆酶催化将CA接枝到乳铁蛋白分子上,自由基接枝,和碱处理。通过实验测试和理论预测分析了CA-BLF非共价和共价复合物的形成机理。与控制BLF相比,非共价复合物中BLF的二级结构被重排和展开,以提供更多的活性位点,共价缀合物的三级结构被改变,蛋白质的氨基参与了共价反应。添加CA后,共价缀合物具有更好的功能活性。这些乳铁蛋白-多酚偶联物可以携带各种生物活性化合物以产生用于包封的乳基递送系统。
    Adding polyphenols to improve the absorption of functional proteins has become a hot topic. Chlorogenic acid is a natural plant polyphenol with anti-inflammatory, antioxidant, and anticancer properties. Bovine lactoferrin is known for its immunomodulatory, anticancer, antibacterial, and iron-chelating properties. Therefore, the non-covalent binding of chlorogenic acid (CA) and bovine lactoferrin (BLF) with different concentrations under neutral conditions was studied. CA was grafted onto lactoferrin molecules by laccase catalysis, free radical grafting, and alkali treatment. The formation mechanism of non-covalent and covalent complexes of CA-BLF was analyzed by experimental test and theoretical prediction. Compared with the control BLF, the secondary structure of BLF in the non-covalent complex was rearranged and unfolded to provide more active sites, the tertiary structure of the covalent conjugate was changed, and the amino group of the protein participated in the covalent reaction. After adding CA, the covalent conjugates have better functional activity. These lactoferrin-polyphenol couplings can carry various bioactive compounds to create milk-based delivery systems for encapsulation.
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  • 文章类型: Journal Article
    由于缺乏用于全身递送的有效方法,潜在重要的候选药物经常面临从考虑中排除。这些候选物的溶解性差对它们作为口服丸剂或注射剂的发展构成了主要障碍。氯硝柳胺,以宿主为导向的抗病毒药物,将是最好的例子。在这项研究中,我们已经开发了一种纳米制剂技术,该技术允许氯硝柳胺与胆酸的非共价制剂。该制剂能够通过胆汁酸包被的纳米颗粒的内吞作用和肠肝循环进行有效的全身递送。氯硝柳胺纳米粒(NDN)的口服生物利用度显著提高到38.3%,与纯氯硝柳胺相比增加了八倍。因此,NDN制剂中氯硝柳胺的血浆浓度达到1,179.6ng/mL,比治疗血浆水平高11倍。血浆水平的这种实质性增加有助于感染SARS-CoV-2的动物的临床症状的完全缓解。我们的纳米制剂不仅为SARS-CoV-2提供了一种可口服递送的抗病毒药物,具有改善的药物生物利用度,而且还为潜在的重要候选药物所面临的全身递送挑战提供了解决方案。
    Potentially significant drug candidates often face elimination from consideration due to the lack of an effective method for systemic delivery. The poor solubility of these candidates has posed a major obstacle for their development as oral pills or injectables. Niclosamide, a host-directed antiviral, is a good example. In this study, a nanoformulation technology that allows for the non-covalent formulation of niclosamide with cholic acids was developed. This formulation enables efficient systemic delivery through endocytosis and enterohepatic circulation of bile-acid-coated nanoparticles. The oral bioavailability of niclosamide-delivery nanoparticles (NDNs) was significantly enhanced to 38.3%, representing an eight-fold increase compared with pure niclosamide. Consequently, the plasma concentration of niclosamide for the NDN formulation reached 1179.6 ng/mL, which is 11 times higher than the therapeutic plasma level. This substantial increase in plasma level contributed to the complete resolution of clinical symptoms in animals infected with severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). This nanoformulation not only provides an orally deliverable antiviral drug for SARS-CoV-2 with improved pharmaceutical bioavailability, but also offers a solution to the systemic delivery challenges faced by potentially significant drug candidates.
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  • 文章类型: Journal Article
    多酚具有广泛接受的健康益处,这些益处受到其低摄取的限制,低生物利用度,在肠道中快速降解。虽然牛奶蛋白是多酚的极好载体,多酚与乳蛋白的特定相互作用,需要理解为促进这些递送系统在食品和药物应用中的利用。我们已经评估了影响乳蛋白-多酚相互作用的不同因素的相关性以及对多酚的生物利用度和健康促进方面的后续影响。疏水性力是多酚与乳蛋白的主要结合力。影响相互作用和结合亲和力的重要因素是多酚的分子量和疏水性。与牛奶蛋白相比,多酚与牛奶蛋白的相互作用提高了抗氧化活性,而与多酚的比较存在矛盾的结果。体外和细胞系研究表明,在存在乳蛋白的情况下,多酚的生物利用度提高,以及更高的抗癌和抗过敏益处。总的来说,这项工作将为更好地理解多酚与乳蛋白的相互作用铺平道路,并通过可持续的绿色过程来定制复合物,使多酚在食品和药物应用中具有更高的生物利用度和健康促进作用。
    Polyphenols have widely accepted health benefits which are limited by their low uptake, low bioavailability, and rapid degradation in the gut. While milk proteins are excellent carriers for polyphenols, the specific interactions of the polyphenols with the milk proteins, need to be understood to facilitate the utilization of these delivery systems in food and pharmaceutical applications. We have evaluated the relevance of different factors affecting milk protein-polyphenol interactions and the subsequent impact on the bioavailability and health promoting aspects of polyphenols. Hydrophobic forces are the primary binding forces of polyphenols to milk proteins. The significant factors affecting the interactions and binding affinity are the molecular weight and the hydrophobicity of the polyphenols. The interaction of polyphenols with milk proteins improved the antioxidant activity in comparison to milk proteins, while conflicting results exists for comparisons with polyphenols. In-vitro and cell line studies demonstrated enhanced bioavailability of polyphenols in the presence of milk proteins as well as higher anti-cancer and anti-allergy benefits. Overall, this work will pave the way for better understanding of polyphenol interactions with milk proteins and enable the tailoring of complexes through sustainable green processes, enabling higher bioavailability and health promoting effects of the polyphenols in food and pharmaceutical applications.
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  • 文章类型: Journal Article
    本文的目的是通过共价和非共价组合研究(-)-表没食子儿茶素-3-没食子酸酯(EGCG)与乳清分离蛋白(WPI)之间的相互作用,以及相互作用对构象和功能变化的影响。乳清蛋白。使用FTIR光谱研究了各种EGCG浓度下乳清蛋白二级结构的构象变化。当与乳清蛋白相互作用时,EGCG与非共价键更可能形成共价键。EGCG的加入改变了乳清蛋白的构象。β-折叠的含量下降,而β转角增加,然而,随机线圈保持不变。在所有WPI-EGCG复合物中观察到表面疏水性的降低,提示EGCG诱导了WPI二级结构的修饰。此外,与EGCG相互作用后,WPI的乳化和起泡特性得到增强。本研讨证实EGCG可以增进WPI的机能性质。这也是WPI-EGCG复合物在乳制品行业中可能应用的指针。
    The objective of this paper was to investigate the interactions between (-)-Epigallocatechin-3-gallate (EGCG) and whey protein isolate (WPI) by covalent and non-covalent combinations and the effects of the interactions on the conformational and functional changes of whey protein. Conformational changes in the secondary structure of whey protein with various concentrations of EGCG were studied using FTIR spectra. EGCG was more likely to form covalent bonds than non-covalent bonds when it interacted with whey proteins. The addition of EGCG altered the conformation of whey protein. The content of β-sheet decreased, while that of β-turn increased, however, the random coil remained unchanged. An reduction in surface hydrophobicity was observed in all the WPI-EGCG complexes, suggesting that modification in secondary structure of WPI were induced by EGCG. Additionally, the emulsifying and foaming attributes of WPI were enhanced after interaction with EGCG. This study confirms that EGCG can enhance the functional properties of WPI. It is also a pointer to the possible application of WPI-EGCG complexes in the dairy industry.
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  • 文章类型: Journal Article
    过渡金属二硫属化合物(TMDC)由于其优异的物理和化学性质而被广泛用于生物传感应用。由于生物材料靶标的特性,生物传感器目前面临的最大挑战是如何提高灵敏度和稳定性。已经使用了许多材料来增强目标信号。其中,TMDC在增强生物传感信号方面表现出优异的性能,因为它们具有金属和半导电的电学功能,可调带隙,大的比表面积等。这里,本文综述了基于TMDC的生物传感器的不同功能化方法和研究进展。用于生物传感器制造的TMDC的修饰方法主要包括两种策略:非共价和共价相互作用。文章总结了不同修饰策略的优缺点及其对生物传感性能的影响。作者提出了TMDC在生物传感器应用中需要解决的挑战和问题。最后,该综述表达了基于TMDC的生物传感器在未来的积极应用前景。
    Transition metal dichalcogenides (TMDCs) are widely used in biosensing applications due to their excellent physical and chemical properties. Due to the properties of biomaterial targets, the biggest challenge that biosensors face now is how to improve the sensitivity and stability. A lot of materials had been used to enhance the target signal. Among them, TMDCs show excellent performance in enhancing biosensing signals because of their metallic and semi-conducting electrical capabilities, tunable band gap, large specific surface area and so on. Here, we review different functionalization methods and research progress of TMDCs-based biosensors. The modification methods of TMDCs for biosensor fabrication mainly include two strategies: non-covalent and covalent interaction. The article summarizes the advantages and disadvantages of different modification strategies and their effects on biosensing performance. The authors present the challenges and issues that TMDCs need to be addressed in biosensor applications. Finally, the review expresses the positive application prospects of TMDCs-based biosensors in the future.
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  • 文章类型: Letter
    由于世界不同地区出现了严重急性呼吸道综合症冠状病毒2(SARS-CoV-2)的新变种,与SARS-CoV-2引发的2019年传染性冠状病毒病(COVID-19)的斗争一直在紧张。因此,抗病毒药物的鉴定尤为重要。为了快速鉴定SARS-CoV-23-胰凝乳蛋白酶样蛋白酶(3CLpro)的抑制剂,一种病毒复制所必需的酶,我们将荧光偏振(FP)技术与生物素-抗生物素蛋白系统(BAS)相结合,开发了一种新型的三明治样FP筛选方法。通过高通量筛选,两次击中3CLpro抑制剂,鉴定了银杏酸(GA)和无心酸(AA),IC50值为11.29±0.48和12.19±0.50μM,分别。通过HPLC-Q-TOF-MS评估它们的结合模式。与GA或AA孵育的SARS-CoV-23CLpro没有检测到质量增加,表明不存在共价加合物。动力学分析清楚地表明,GA和AA均通过可逆和混合抑制方式抑制SARS-CoV-23CLpro。我们的结果与GA和AA作为SARS-CoV-23CLpro的不可逆和共价抑制剂的结论相反,这是基于Chen等人的研究。
    Because of the emerging variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in different regions of the world, the battle with infectious coronavirus disease 2019 (COVID-19) caused by SARS-CoV-2 has been seesawing. Therefore, the identification of antiviral drugs is of particular importance. In order to rapidly identify inhibitors for SARS-CoV-2 3-chymotrypsin-like protease (3CLpro), an enzyme essential for viral replication, we combined the fluorescence polarization (FP) technique with biotin-avidin system (BAS) and developed a novel sandwich-like FP screening assay. Through high-throughput screening, two hits of 3CLpro inhibitors, ginkgolic acid (GA) and anacardic acid (AA) were identified, which showed IC50 values of 11.29 ± 0.48 and 12.19 ± 0.50 μM, respectively. Their binding modes were evaluated by HPLC-Q-TOF-MS. There was no mass increase detected for SARS-CoV-2 3CLpro incubated with either GA or AA, indicating the absence of covalent adducts. The kinetic analysis clearly demonstrated that both GA and AA inhibit SARS-CoV-2 3CLpro via reversible and mixed-inhibition manner. Our results argue against conclusion that GA and AA act as irreversible and covalent inhibitors against SARS-CoV-2 3CLpro, which is based on the studies by Chen et al.
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  • 文章类型: Journal Article
    设计了一系列新的非共价拟肽蛋白酶体抑制剂,其C末端具有大基团,N末端具有N-烷基化,旨在提高体内代谢稳定性。筛选了所有目标化合物对人20S蛋白酶体的抑制活性。与IC50值低于10nM的阳性对照硼替佐米相比,大多数类似物表现出显著的效力,其还显示针对多发性骨髓瘤(MM)细胞系和人急性髓细胞性白血病(AML)细胞的有效细胞毒性活性。此外,对所选化合物进行全血稳定性和体内蛋白酶体抑制活性实验,和代表性化合物43(IC50=8.39±2.32nM,RPMI-8226:IC50=15.290±2.281nM,MM-1S:IC50=9.067±3.103nM,MV-4-11:IC50=2.464±0.713nM)显示半衰期延长超过9倍(329.21分钟VS36.79分钟),并且在体内具有有效的蛋白酶体抑制活性。积极的结果证实了代谢引导优化策略的可靠性,发现的类似物是探索新的抗MM药物的潜在线索。
    A series of novel non-covalent peptidomimetic proteasome inhibitors possessing bulky group at the C-terminus and N-alkylation at the N-terminus were designed with the aim to increase metabolic stabilities in vivo. All the target compounds were screened for their inhibitory activities against human 20S proteasome, and most analogs exhibited notable potency compared with the positive control bortezomib with IC50 values lower than 10 nM, which also displayed potent cytotoxic activities against multiple myeloma (MM) cell lines and human acute myeloid leukemia (AML) cells. Furthermore, whole blood stability and in vivo proteasome inhibitory activity experiments of selected compounds were conducted for further evaluation, and the representative compound 43 (IC50 = 8.39 ± 2.32 nM, RPMI-8226: IC50 = 15.290 ± 2.281 nM, MM-1S: IC50 = 9.067 ± 3.103 nM, MV-4-11: IC50 = 2.464 ± 0.713 nM) revealed a half-life extension of greater than 9-fold (329.21 min VS 36.79 min) and potent proteasome inhibitory activity in vivo. The positive results confirmed the reliability of the metabolism guided optimization strategy, and the analogs discovered are potential leads for exploring new anti-MM drugs.
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  • 文章类型: Journal Article
    Based on the interaction modes of the natural 20S proteasome inhibitors TMC-95A, we have previously discovered a dipeptide 1. To explore the SAR around compound 1, we designed and synthesized a series of dipeptides (8-38) with a fragment-based strategy. Among them, nine compounds showed significant inhibitory activities against the chymotrypsin-like activity of human 20S proteasome with IC50 values at the submicromolar level, which were comparable or even superior to the parent compound 1. Meanwhile, they displayed no significant inhibition against trypsin-like and caspase-like activities of 20S proteasome. The results suggested the feasibility to design dipeptides as novel and potent 20S proteasome inhibitors.[Formula: see text].
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  • 文章类型: Journal Article
    Ibrutinib是BTK靶向的不可逆抑制剂。在这项研究中,我们证明,通过质谱和晶体学,依鲁替尼以非共价方式有效抑制SRC活性.S345C突变使SRC与依鲁替尼共价结合,并恢复伊布替尼对看门人突变体的效力。依鲁替尼/SRC的共晶结构显示SRC的Ser345未与依鲁替尼形成共价键,导致效力降低和克服SRC守门人突变的能力丧失。X射线晶体学研究还提供了结构见解,以了解为什么ibrutinib对不同激酶的看门人突变体表现不同。
    Ibrutinib is a BTK-targeted irreversible inhibitor. In this study, we demonstrate that ibrutinib potently inhibits SRC activity in a non-covalent manner via mass spectrometry and crystallography. The S345C mutation renders SRC to bind covalently with ibrutinib, and restores the potency of ibrutinib against the gatekeeper mutant. The co-crystal structure of ibrutinib/SRC shows Ser345 of SRC did not form covalent bond with ibrutinib, leading to a decrease of potency and loss of the ability to overcome the gatekeeper mutation of SRC. The X-ray crystallographic studies also provide structural insight into why ibrutinib behaves differently against gatekeeper mutants of different kinases.
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  • 文章类型: Journal Article
    Thirty novel triaryl compounds were designed and synthesized based on the known proteasome inhibitor PI-1840. Most of them showed significant inhibition against the β5c subunit of human 20S proteasome, and five of them exhibited IC50 values at the sub-micromolar level, which were comparable to or even more potent than PI-1840. The most active two (1c and 1d) showed IC50 values of 0.12 and 0.18 μM against the β5c subunit, respectively, while they displayed no obvious inhibition against the β2c, β1c and β5i subunits. Molecular docking provided informative clues for the subunit selectivity. The potent and subunit selective proteasome inhibitors identified herein represent new chemical templates for further molecular optimization.
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