Gills

Gills
  • 文章类型: Journal Article
    当前水产养殖中的预防和疾病控制措施突出了预防疾病和减少抗生素使用的替代策略的需要。粘液覆盖的粘膜表面是病原体遇到的第一道屏障。粘液,主要由高度糖基化的粘蛋白组成,如果我们能够加强这一屏障,就有可能为疾病预防做出贡献。因此,这项研究的目的是基于市售细胞系开发和表征鱼类的体外粘膜表面模型,这些细胞系在功能上与粘蛋白调节和宿主-病原体相互作用的研究相关。虹鳟鱼(Oncorhynchusmykiss)g上皮细胞系RTgill-W1和奇努克鲑鱼(Oncorhynchustshawytscha)CHSE-214的胚胎细胞系在聚碳酸酯膜插入物上生长,并进行化学处理以将细胞分化为粘液产生细胞。RTGill-W1和CHSE-214在汇合后两周形成粘附层,通过增加粘蛋白的产生,进一步对γ-分泌酶抑制剂DAPT和延长培养物的治疗作出反应。添加到体外膜后6小时,用N-叠氮基乙酰半乳糖胺代谢标记粘蛋白。基于RTgill-W1的膜之间的掺入标记水平相对相似,而在CHSE体外膜中观察到较大的个体间差异。此外,RTgill-W1细胞裂解物的O-糖组学鉴定出三种唾液酸化的O-聚糖,即Galβ1-3(NeuAcα2-6)GalNAcol,NeuAca-Galβ1-3GalNAcol和NeuAca-Galβ1-3(NeuAcaα2-6)GalNAcol,类似于虹鳟鱼g粘蛋白中存在的糖基化。这些聚糖也存在于CHSE-214中。此外,我们证明了鱼类病原体A.salmonicida与RTgill-W1和CHSE-214细胞裂解物的结合。因此,这些模型与体内粘膜表面相似,可用于研究病原体和调节成分对粘蛋白产生的影响。
    Current prophylactic and disease control measures in aquaculture highlight the need of alternative strategies to prevent disease and reduce antibiotic use. Mucus covered mucosal surfaces are the first barriers pathogens encounter. Mucus, which is mainly composed of highly glycosylated mucins, has the potential to contribute to disease prevention if we can strengthen this barrier. Therefore, aim of this study was to develop and characterize fish in vitro mucosal surface models based on commercially available cell lines that are functionally relevant for studies on mucin regulation and host-pathogen interactions. The rainbow trout (Oncorhynchus mykiss) gill epithelial cell line RTgill-W1 and the embryonic cell line from Chinook salmon (Oncorhynchus tshawytscha) CHSE-214 were grown on polycarbonate membrane inserts and chemically treated to differentiate the cells into mucus producing cells. RTGill-W1 and CHSE-214 formed an adherent layer at two weeks post-confluence, which further responded to treatment with the γ-secretase inhibitor DAPT and prolonged culture by increasing the mucin production. Mucins were metabolically labelled with N-azidoacetylgalactosamine 6 h post addition to the in vitro membranes. The level of incorporated label was relatively similar between membranes based on RTgill-W1, while larger interindividual variation was observed among the CHSE in vitro membranes. Furthermore, O-glycomics of RTgill-W1 cell lysates identified three sialylated O-glycans, namely Galβ1-3(NeuAcα2-6)GalNAcol, NeuAcα-Galβ1-3GalNAcol and NeuAcα-Galβ1-3(NeuAcα2-6)GalNAcol, resembling the glycosylation present in rainbow trout gill mucin. These glycans were also present in CHSE-214. Additionally, we demonstrated binding of the fish pathogen A. salmonicida to RTgill-W1 and CHSE-214 cell lysates. Thus, these models have similarities to in vivo mucosal surfaces and can be used to investigate the effect of pathogens and modulatory components on mucin production.
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  • 文章类型: Journal Article
    African cichlids are model systems for evolutionary studies and host-parasite interactions, because of their adaptive radiations and because they harbour many species of monogenean parasites with high host-specificity. Five locations were sampled in southern Lake Victoria: gill-infecting monogeneans were surveyed from 18 cichlid species belonging to this radiation superflock and two others representing two older and distantly related lineages. We found one species of Gyrodactylidae, Gyrodactylus sturmbaueri Vanhove, Snoeks, Volckaert & Huyse, 2011, and seven species of Dactylogyridae. Four are described herein: Cichlidogyrus pseudodossoui n. sp., Cichlidogyrus nyanza n. sp., Cichlidogyrus furu n. sp., and Cichlidogyrus vetusmolendarius n. sp. Another Cichlidogyrus species is reported but not formally described (low number of specimens, morphological similarity with C. furu n. sp.). Two other species are redescribed: C. bifurcatus Paperna, 1960 and C. longipenis Paperna & Thurston, 1969. Our results confirm that the monogenean fauna of Victorian littoral cichlids displays lower species richness and lower host-specificity than that of Lake Tanganyika littoral cichlids. In C. furu n. sp., hooks V are clearly longer than the others, highlighting the need to re-evaluate the current classification system that considers hook pairs III-VII as rather uniform. Some morphological features of C. bifurcatus, C. longipenis, and C. nyanza n. sp. suggest that these are closely related to congeners that infect other haplochromines. Morphological traits indicate that representatives of Cichlidogyrus colonised Lake Victoria haplochromines or their ancestors at least twice, which is in line with the Lake Victoria superflock being colonised by two cichlid tribes (Haplochromini and Oreochromini).
    UNASSIGNED: Quatre espèces nouvelles de Cichlidogyrus (Plathelminthes, Monopisthocotyla, Dactylogyridae) parasites d’haplochrominés (Cichlidae) du lac Victoria, avec la redescription de C. bifurcatus et C. longipenis.
    UNASSIGNED: Les cichlidés africains sont des systèmes modèles pour les études évolutives et les interactions hôtes-parasites, en raison de leurs radiations adaptatives et parce qu’ils hébergent de nombreuses espèces de monogènes parasites avec une spécificité d’hôte étroite. Cinq sites ont été échantillonnés dans le sud du lac Victoria, les monogènes infectant les branchies ont été étudiés chez 18 espèces de cichlidés appartenant à ce superflock et de deux autres espèces représentant deux lignées plus anciennes et éloignées. Nous avons trouvé une espèce de Gyrodactylidae, Gyrodactylus sturmbaueri Vanhove, Snoeks, Volckaert & Huyse, 2011, et sept espèces de Dactylogyridae. Quatre sont décrites ici : Cichlidogyrus pseudodossoui n. sp., Cichlidogyrus nyanza n. sp., Cichlidogyrus furu n. sp. et Cichlidogyrus vetusmolendarius n. sp. Une autre espèce de Cichlidogyrus est signalée mais non formellement décrite (faible nombre de spécimens, similarité morphologique avec C. furu n. sp.). Deux autres espèces sont redécrites : C. bifurcatus Paperna, 1960 et C. longipenis Paperna & Thurston, 1969. Nos résultats confirment que la faune des monogènes des cichlidés du littoral du lac Victoria présente une richesse en espèces et une spécificité d’hôte inférieures à celles des cichlidés du littoral du lac Tanganyika. Chez C. furu n. sp., les crochets V sont clairement plus longs que les autres, ce qui souligne la nécessité de réévaluer le système de classification actuel qui considère que les crochets III-VII sont plutôt uniformes. Certaines caractéristiques morphologiques de C. bifurcatus, C. longipenis et C. nyanza n. sp. suggèrent que ceux-ci sont étroitement liés aux congénères qui infectent les autres haplochrominés. Les traits morphologiques indiquent que les représentants de Cichlidogyrus ont colonisé les haplochrominés du lac Victoria ou leurs ancêtres au moins deux fois, ce qui concorde avec le fait que le superflock du lac Victoria a été colonisé par deux tribus de cichlidés (Haplochromini et Oreochromini).
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  • 文章类型: Journal Article
    溶藻弧菌是革兰氏阴性,属于弧菌科的杆状细菌,水产养殖动物中常见的病原体,然而,关于其对锯缘青蟹(泥蟹)影响的研究有限。在这项研究中,在香港水产养殖场爆发疾病期间,我们从死泥蟹中分离出溶藻弧菌。在夏季造成高达70%的死亡率。
    实验感染和组织病理学研究溶藻弧菌SWS在锯缘链球菌中的致病性,并验证Koch的假设。全面的全基因组分析和系统发育分析抗菌素敏感性测试,和生化表征也进行了。
    我们的发现表明,溶藻弧菌SWS在锯缘链球菌中引起高死亡率(75%),感染个体表现出不活动,食欲不振,褪色和变暗的肝胰腺,ill,爪部肌肉不透明.组织病理学分析显示肝胰腺组织损伤和变性,ill,和爪肌提示溶藻弧菌SWS感染的直接和间接影响。
    这项研究提供了作为锯缘链球菌水产养殖中新兴病原体的溶藻弧菌SWS的全面表征。我们的发现强调了持续监测的重要性,早期发现,并制定针对性的疾病管理策略,以减轻泥蟹水产养殖中弧菌病暴发的经济影响。
    UNASSIGNED: Vibrio alginolyticus is a Gram-negative, rod-shaped bacterium belonging to the family of Vibrionaceae, a common pathogen in aquaculture animals, However, studies on its impact on Scylla serrata (mud crabs) are limited. In this study, we isolated V. alginolyticus SWS from dead mud crab during a disease outbreak in a Hong Kong aquaculture farm, which caused up to 70% mortality during summer.
    UNASSIGNED: Experimental infection and histopathology were used to investigate the pathogenicity of V. alginolyticus SWS in S. serrata and validate Koch\'s postulates. Comprehensive whole-genome analysis and phylogenetic analysis antimicrobial susceptibility testing, and biochemical characterization were also performed.
    UNASSIGNED: Our findings showed that V. alginolyticus SWS caused high mortality (75%) in S. serrata with infected individuals exhibiting inactivity, loss of appetite, decolored and darkened hepatopancreas, gills, and opaque muscle in the claw. Histopathological analysis revealed tissue damage and degeneration in the hepatopancreas, gills, and claw muscle suggesting direct and indirect impacts of V. alginolyticus SWS infection.
    UNASSIGNED: This study provides a comprehensive characterization of V. alginolyticus SWS as an emerging pathogen in S. serrata aquaculture. Our findings underscore the importance of ongoing surveillance, early detection, and the development of targeted disease management strategies to mitigate the economic impact of vibriosis outbreaks in mud crab aquaculture.
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  • 文章类型: Journal Article
    日本沼虾是中国重要的商业淡水物种。然而,在中国主要的盐碱水源中培养,日本M.nipponense的耐碱能力不足。因此,迫切需要在该物种中进行耐碱性的遗传改良。在本研究中,我们旨在分析在碱浓度为0mmol/L的情况下,碱处理在96h碱度暴露后对该物种的ill的影响,4mmol/L,8mmol/L,和12mmol/L通过进行组织学观察,抗氧化酶的测量,代谢谱分析,和转录组谱分析。本研究的结果表明,碱处理刺激了丙二醛的含量,谷胱甘肽,谷胱甘肽过氧化物酶,表明这些抗氧化酶在保护身体免受损害中起着至关重要的作用,碱处理引起的。此外,高浓度的碱处理(>8mmol/L)导致了g膜和血淋巴血管的损伤,影响了ill的正常呼吸功能。代谢谱分析表明,代谢途径,次级代谢产物的生物合成,植物次生代谢产物的生物合成,不同环境中的微生物代谢,氨基酸的生物合成被确定为差异表达代谢产物的主要富集代谢途径。这与以前的出版物一致,受各种环境因素的影响。转录组谱分析表明,12mmol/L的碱浓度比其他碱浓度对基因表达的变化具有更大的调节作用。KEGG分析显示吞噬体,溶酶体,糖酵解/糖异生,嘌呤代谢,氨基糖和核苷酸糖代谢,在本研究中,内吞被确定为主要的富集代谢途径,预测这些代谢途径可能与日本M.碱处理的适应有关。吞噬体,溶酶体,嘌呤代谢,和内吞作用是免疫相关的代谢途径,而糖酵解/糖异生,氨基糖和核苷酸糖代谢是能量代谢相关的代谢途径。差异表达基因(DEGs)的定量PCR分析验证了RNA-Seq的准确性。碱处理显著刺激吞噬体和溶酶体代谢途径中DEGs的表达,表明吞噬体和溶酶体在该物种的耐碱调节中起着至关重要的作用,以及这些代谢途径的基因。本研究确定了碱处理对ill的影响,为日本M.耐碱性的遗传改良提供了有价值的证据。
    Macrobrachium nipponense is an important commercial freshwater species in China. However, the ability of alkali tolerance of M. nipponense is insufficient to culture in the major saline-alkali water source in China. Thus, it is urgently needed to perform the genetic improvement of alkali tolerance in this species. In the present study, we aimed to analyse the effects of alkali treatment on gills in this species after 96 h alkalinity exposure under the alkali concentrations of 0 mmol/L, 4 mmol/L, 8 mmol/L, and 12 mmol/L through performing the histological observations, measurement of antioxidant enzymes, metabolic profiling analysis, and transcriptome profiling analysis. The results of the present study revealed that alkali treatment stimulated the contents of malondialdehyde, glutathione, glutathione peroxidase in gills, indicating these antioxidant enzymes plays essential roles in the protection of body from the damage, caused by the alkali treatment. In addition, high concentration of alkali treatment (> 8 mmol/L) resulted in the damage of gill membrane and haemolymph vessel, affecting the normal respiratory function of gill. Metabolic profiling analysis revealed that Metabolic pathways, Biosynthesis of secondary metabolites, Biosynthesis of plant secondary metabolites, Microbial metabolism in diverse environments, Biosynthesis of amino acids were identified as the main enriched metabolic pathways of differentially expressed metabolites, which are consistent with the previous publications, treated by the various environmental factors. Transcriptome profiling analyses revealed that the alkali concentration of 12 mmol/L has more regulatory effects on the changes of gene expression than the other alkali concentrations. KEGG analysis revealed that Phagosome, Lysosome, Glycolysis/Gluconeogenesis, Purine Metabolism, Amino sugar and nucleotide sugar metabolism, and Endocytosis were identified as the main enriched metabolic pathways in the present study, predicting these metabolic pathways may be involved in the adaption of alkali treatment in M. nipponense. Phagosome, Lysosome, Purine Metabolism, and Endocytosis are immune-related metabolic pathways, while Glycolysis/Gluconeogenesis, and Amino sugar and nucleotide sugar metabolism are energy metabolism-related metabolic pathways. Quantitative PCR analyses of differentially expressed genes (DEGs) verified the accuracy of the RNA-Seq. Alkali treatment significantly stimulated the expressions of DEGs from the metabolic pathways of Phagosome and Lysosome, suggesting Phagosome and Lysosome play essential roles in the regulation of alkali tolerance in this species, as well as the genes from these metabolic pathways. The present study identified the effects of alkali treatment on gills, providing valuable evidences for the genetic improvement of alkali tolerance in M. nipponense.
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  • 文章类型: Journal Article
    Paperna,1972年(Monogenoidea:Dactylogyridae)被发现寄生在魔鬼火鱼的ill薄片上,Pteroismiles(Bennet)(Perciformes:Scorpaenidae),在萨法加附近的红海(北纬26°44,33°56\'E),埃及。根据可用标本的形态特征描述了寄生虫物种,并将其转移到PlycephalotremaKritsky和Nitta,2019年(牙本质病毒科)为翼盘虫(Paperna,1972)n.梳子。Pl的发生。在Safaga之外的翼龙,埃及,代表了亚喀巴湾南端西南约160公里的蠕虫范围延伸。通过对Pl的28SrDNA基因的分子序列的分析,支持了基于对形态特征的评估将物种转移到桔梗。翼龙和其他49种。最大似然,贝叶斯推理,对该dactylogyrid序列数据的最大简约分析显示,翼黄曲霉在鸭嘴兽枝中具有重要的支持。在感染蝎子鱼的dactylogyrid物种的文献综述中,已确定无尾猴。戴尔等人的。从冲绳-jima附近收集的月牙狮鱼PteroislunulataTemminck和Schlegel,日本代表了一种未描述的桔梗。
    UNASSIGNED: Paperna, 1972 (Monogenoidea: Dactylogyridae) was found parasitizing the gill lamellae of devil firefish, Pterois miles (Bennet) (Perciformes: Scorpaenidae), in the Red Sea off Safaga (26°44\'N, 33°56\'E), Egypt. The parasite species was described based on morphological features of available specimens and transferred to PlatycephalotremaKritsky and Nitta, 2019 (Dactylogyridae) as Platycephalotrema pteroisi (Paperna, 1972) n. comb. The occurrence of Pl. pteroisi off Safaga, Egypt, represented a range extension for the helminth of about 160 km to the southwest of the southern end of the Gulf of Aqaba. The transfer of the species to Platycephalotrema based on an evaluation of morphological features was supported by an analysis of molecular sequences of the 28S rDNA gene of Pl. pteroisi and 49 other dactylogyrid species. Maximum-likelihood, Bayesian inference, and maximum parsimony analyses of this dactylogyrid sequence data revealed H. pteroisi to nest with significant support within the clade of Platycephalotrema spp. During the literature review of dactylogyrid species infecting scorpionfishes, it was determined that Ancyrocephalus sp. of Dyer et al. from luna lion fish Pterois lunulata Temminck and Schlegel collected off Okinawa-jima, Japan represented an undescribed species of Platycephalotrema.
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  • 文章类型: Journal Article
    Bathymodioline贻贝在深海甲烷渗漏和热液喷口栖息地中占主导地位,并主要通过其g细菌细胞中的化学合成内共生细菌获得营养和能量。然而,协调贻贝宿主-共生体相互作用的分子机制仍不清楚。这里,我们使用单核RNA测序(snRNA-seq)和全装原位杂交,从南海甲烷渗漏(1100m深)的贻贝Gigantidasplatif中构建了g的全面细胞图谱。我们确定了13种类型的细胞,包括三个以前未知的,并发现未知的组织异质性。每个细胞类型都有一个指定的功能来支持g的结构和功能,为化学合成创造最佳环境,并有效地从内共生细菌中获取营养。对原位移植贻贝的snRNA-seq的分析清楚地表明了细胞状态响应于环境振荡的变化。我们的发现为宿主-共生体相互作用和双壳类动物的环境适应机制提供了见解。
    Bathymodioline mussels dominate deep-sea methane seep and hydrothermal vent habitats and obtain nutrients and energy primarily through chemosynthetic endosymbiotic bacteria in the bacteriocytes of their gill. However, the molecular mechanisms that orchestrate mussel host-symbiont interactions remain unclear. Here, we constructed a comprehensive cell atlas of the gill in the mussel Gigantidas platifrons from the South China Sea methane seeps (1100 m depth) using single-nucleus RNA-sequencing (snRNA-seq) and whole-mount in situ hybridisation. We identified 13 types of cells, including three previously unknown ones, and uncovered unknown tissue heterogeneity. Every cell type has a designated function in supporting the gill\'s structure and function, creating an optimal environment for chemosynthesis, and effectively acquiring nutrients from the endosymbiotic bacteria. Analysis of snRNA-seq of in situ transplanted mussels clearly showed the shifts in cell state in response to environmental oscillations. Our findings provide insight into the principles of host-symbiont interaction and the bivalves\' environmental adaption mechanisms.
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  • 文章类型: Journal Article
    化合物和厚朴酚,来源于厚朴的树皮,具有诱导细胞凋亡和抑制活性氧引起的细胞损伤的能力。这项研究的目的是通过进行半静态急性毒性试验,研究和厚朴酚对斑马鱼(Daniorerio)的毒理学和组织病理学影响,该试验涉及浸入含和厚朴酚的溶液中。结果表明,和厚朴酚对斑马鱼的毒性作用主要表现在肝脏和ill。当暴露于0.6毫克/升的和厚朴酚时,它可能导致肝脏出血以及ill组织肿胀和坏死,高浓度和厚朴酚可引发炎症反应。此外,研究发现,和厚朴酚可通过P53途径诱导肝脏和ill组织凋亡,并具有增强抗氧化能力。本研究的发现大大有助于更深刻地理解和厚朴酚的毒性影响及其潜在的机制,从而为今后和厚朴酚的安全利用及相关药物进展提供有价值的参考。
    The compound Honokiol, derived from the bark of Magnolia officinalis, possesses the ability to induce apoptosis and inhibit cellular damage caused by reactive oxygen species. The objective of this study was to investigate the toxicological and histopathological effects of Honokiol on zebrafish (Danio rerio) through conducting a semistatic acute toxicity test involving immersion in an Honokiol-containing solution. The results showed that the toxic effects of Honokiol on zebrafish were primarily manifested in the liver and gills. When exposed to 0.6 mg/L of Honokiol, it could lead to liver hemorrhage as well as swelling and necrosis of gill tissues, and high concentrations of Honokiol could trigger inflammatory responses. Additionally, research found that Honokiol could induce apoptosis in liver and gill tissues through the P53 pathway and possessed the ability to enhance antioxidation. The present findings significantly contribute to a more profound understanding of the toxic impact of Honokiol and its underlying mechanism, thereby providing a valuable reference for the future safe utilization of Honokiol and related pharmaceutical advancements.
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  • 文章类型: Journal Article
    背景:了解养殖鱼类中常驻微生物群与疾病之间的关系是一个重要的新兴研究领域。特别是海洋g疾病被认为是对大西洋鲑鱼(Salmosalar)水产养殖的重要挑战,然而,关于常驻g微生物群在提供保护或增强不同g疾病方面可能发挥的作用,人们知之甚少。这里,16SrRNA测序用于检查g微生物组以及养殖大西洋鲑鱼中的鱼类健康筛查。结果用于探索微生物群落与g病之间的关系。
    结果:在整个采样期间观察到微生物群落重组,并与变化的各种驱动因素有关,包括环境条件和g病理学的严重程度。在更健康的g上具有显着更高的相对丰度的类群包括Shewanella属中的分离株,和原细菌科内的类群。相比之下,改变了念珠菌的丰度。与受损的ill有关。有趣的是,群落丰富度和多样性的更普遍的变化与变更的ill健康无关,因此显然不会对鱼类有害。总体和组织学上的g评分显示了g病理学的季节性变化,在秋季增加了ill损伤的严重程度。导致人群中观察到的病理学的特定感染原因包括g病阿米巴g病(AGD),然而,由于本研究的非受控性质,以及所观察到的病理结果可能是不同原因导致的,因此并不强烈支持微生物群落与特定传染性或非传染性驱动因素之间的关联.
    结论:结果表明,养殖大西洋鲑鱼g的微生物群落在海洋环境中不断重组,对这种变化的影响是混合的,包括环境,host,和致病因素。特定分类单元与不同g健康状态的显着关联表明,这些分类单元可能是g健康的有意义指标。通过更频繁的采样和刻意的g操作进行进一步的研究将为该领域的知识提供重要的进步。总的来说,尽管关于什么构成健康或适应不良的ill微生物群落仍有很多知识,这项研究的结果提供了该领域的明确进展,在海洋阶段养殖的大西洋鲑鱼的年度生产周期中,为g的微生物群落结构提供了新的见解。
    BACKGROUND: Understanding the relationship between resident microbiota and disease in cultured fish represents an important and emerging area of study. Marine gill disorders in particular are considered an important challenge to Atlantic salmon (Salmo salar) aquaculture, however relatively little is known regarding the role resident gill microbiota might play in providing protection from or potentiating different gill diseases. Here, 16S rRNA sequencing was used to examine the gill microbiome alongside fish health screening in farmed Atlantic salmon. Results were used to explore the relationship between microbial communities and gill disease.
    RESULTS: Microbial community restructuring was observed throughout the sampling period and linked to varied drivers of change, including environmental conditions and severity of gill pathology. Taxa with significantly greater relative abundance on healthier gills included isolates within genus Shewanella, and taxa within family Procabacteriaceae. In contrast, altered abundance of Candidatus Branchiomonas and Rubritalea spp. were associated with damaged gills. Interestingly, more general changes in community richness and diversity were not associated with altered gill health, and thus not apparently deleterious to fish. Gross and histological gill scoring demonstrated seasonal shifts in gill pathology, with increased severity of gill damage in autumn. Specific infectious causes that contributed to observed pathology within the population included the gill disorder amoebic gill disease (AGD), however due to the uncontrolled nature of this study and likely mixed contribution of various causes of gill disease to observed pathology results do not strongly support an association between the microbial community and specific infectious or non-infectious drivers of gill pathology.
    CONCLUSIONS: Results suggest that the microbial community of farmed Atlantic salmon gills undergo continual restructuring in the marine environment, with mixed influences upon this change including environmental, host, and pathogenic factors. A significant association of specific taxa with different gill health states suggests these taxa might make meaningful indicators of gill health. Further research with more frequent sampling and deliberate manipulation of gills would provide important advancement of knowledge in this area. Overall, although much is still to be learnt regarding what constitutes a healthy or maladapted gill microbial community, the results of this study provide clear advancement of the field, providing new insight into the microbial community structure of gills during an annual production cycle of marine-stage farmed Atlantic salmon.
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  • 文章类型: Journal Article
    通用术语“吉尔病”是指广泛的疾病,这些疾病会影响到ill并严重影响全世界的鲑鱼水产养殖系统。在虹鳟鱼淡水水产养殖中,已经描述了导致ill疾病的各种病因,特别是黄杆菌和变形虫,但是研究表明,病因更加复杂和多因素。这里,在自然疾病爆发和随后使用土霉素进行抗生素治疗期间,通过标准实验室技术和16SrRNA下一代测序(NGS)分析,对一组受g病影响的虹鳟鱼进行了监测.NGS结果显示基于g的微生物群落在处理前和后处理之间的样品的清晰聚类。有趣的是,虹鳟鱼中的三种主要致病菌(耶尔森氏菌,嗜冷黄杆菌,和嗜枝黄杆菌)似乎是治疗前和治疗后组间多样性的弱描述。在这项研究中,在爆发和随后的治疗过程中,g微生物组的动态远比文献中先前报道的复杂得多,和环境因素在确定ill病方面似乎至关重要。这些发现提供了一个潜在的新观点诊断和治疗的ill疾病,显示了常规实验室方法在阐明虹鳟鱼这种疾病的复杂性方面的局限性。就作者所知,这项工作首次描述了在自然爆发和随后的抗生素治疗期间虹鳟鱼g的微生物组。这项研究的结果表明,NGS可以在g病理学的分析和理解中发挥关键作用。强烈建议在未来的研究中使用NGS,以更深入地了解此类疾病,将ill的微生物组与其他可能的辅因子相关联,并建立强有力的预防指南。
    The generic term \"Gill disease\" refers to a wide range of disorders that affect the gills and severely impact salmonid aquaculture systems worldwide. In rainbow trout freshwater aquaculture, various etiological agents causing gill diseases have been described, particularly Flavobacterium and Amoeba species, but research studies suggest a more complex and multifactorial aetiology. Here, a cohort of rainbow trout affected by gill disease is monitored both through standard laboratory techniques and 16S rRNA Next-Generation Sequencing (NGS) analysis during a natural disease outbreak and subsequent antibiotic treatment with Oxytetracycline. NGS results show a clear clustering of the samples between pre- and post-treatment based on the microbial community of the gills. Interestingly, the three main pathogenic bacteria species in rainbow trout (Yersinia ruckeri, Flavobacterium psychrophilum, and Flavobacterium branchiophilum) appear to be weak descriptors of the diversity between pre-treatment and post-treatment groups. In this study, the dynamics of the gill microbiome during the outbreak and subsequent treatment are far more complex than previously reported in the literature, and environmental factors seem of the utmost importance in determining gill disease. These findings present a potential novel perspective on the diagnosis and management of gill diseases, showing the limitations of conventional laboratory methodologies in elucidating the complexity of this disease in rainbow trout. To the authors\' knowledge, this work is the first to describe the microbiome of rainbow trout gills during a natural outbreak and subsequent antibiotic treatment. The results of this study suggest that NGS can play a critical role in the analysis and comprehension of gill pathology. Using NGS in future research is highly recommended to gain deeper insights into such diseases correlating gill\'s microbiome with other possible cofactors and establish strong prevention guidelines.
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