Genetic modification

遗传修饰
  • 文章类型: Journal Article
    背景:对NK细胞用于癌细胞治疗的日益关注与需要建立高效的遗传修饰方案有关,特别是通过逆转录病毒转导。
    目的:在这项工作中,我们优化了基于逆转录病毒的修饰过程的几个阶段,并确定了氨基酸转运蛋白ASCT2在NK细胞亚群之间的分布。
    方法:使用用磷酸钙方法转染的PhoenixAmpho细胞系产生逆转录病毒颗粒。我们将基于RD114的逆转录病毒转导用于淋巴细胞细胞系和原代NK细胞。
    结果:我们已经确定了收集RD114假型病毒上清液的最佳时间,导致有效NK细胞修饰所需的病毒颗粒滴度在48至72小时之间。通过基于retronectin的方法进行的逆转录病毒修饰不会改变NK细胞的功能活性和细胞存活。我们鉴定了部分与ASCT2表面表达相关的细胞系之间感染多重性(MOI)的差异。具有较高ASCT2水平的细胞更易于用RD114假型病毒颗粒转导。与它们的阴性对应物相比,在活化的CD57+和KIR2DL2DL3+NK细胞中显示更高的ASCT2表达水平。
    结论:我们的发现为NK细胞转导提供了更细致的理解,为改善涉及NK细胞修饰的治疗应用提供有价值的见解。
    BACKGROUND: The growing attention to NK cells for cancer cell therapy is associated with the need to establish highly efficient protocols for their genetic modification, particularly by retroviral transduction.
    OBJECTIVE: In this work, we have optimized several stages of the retroviral-based modification process, and determined the distribution of the amino acid transporter ASCT2 between NK cell subsets.
    METHODS: Retroviral particles were produced using the Phoenix Ampho cell line transfected with the calcium phosphate method . We used RD114-based retroviral transduction for lymphocyte cell lines and primary NK cells.
    RESULTS: We have determined the optimal time to collect the RD114-pseudotyped viral supernatants resulting in the titer of viral particles required for efficient NK cell modification to be between 48 and 72 hours. Retroviral modification by retronectin-based method did not alter NK cell functional activity and cell survival. We identified differences in the Multiplicity of Infection (MOI) among cell lines that were partially associated with the ASCT2 surface expression. Cells with higher ASCT2 levels were more susceptible to transduction with RD114-pseudotyped viral particles. Higher ASCT2 expression levels were revealed in activated CD57+ and KIR2DL2DL3+ NK cells compared to their negative counterparts.
    CONCLUSIONS: Our findings provide a more nuanced understanding of NK cell transduction, offering valuable insights for improving therapeutic applications involving NK cell modification.
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  • 文章类型: Journal Article
    背景:核因子κB(NF-κB)是调节各种细胞功能的关键途径,包括免疫反应,扩散,增长,和凋亡。此外,该途径受到严格调控,以确保在免疫原性触发因素或遗传毒性刺激存在下的稳定性.缺乏对NF-κB通路的控制可导致不同疾病的开始,主要是自身免疫性疾病和癌症,包括肾细胞癌(RCC)。肾癌是最常见的肾癌类型,其特征是复杂的遗传组成和难以捉摸的分子机制。
    目的:综述NF-κB调控异常在不同亚型RCC中的作用机制及其对发病的影响。
    这篇综述通过驱动多个基因的表达和与不同途径的相互作用,突出了NF-κB在RCC发生和进展中的重要作用。包括磷脂酰肌醇3-激酶(PI3K)/蛋白激酶B(Akt)途径。RCC队列的计算机模拟分析和分子研究表明,多个NF-κB成员和靶基因失调。失调包括受体,如TLR2,信号传递成员,包括RelA,和目标基因,例如,HIF-1α。缺乏有效的调节机制导致组成型活性的NF-κB途径,促进癌症生长,迁移,和生存。在这次审查中,我们全面总结了NF-κB相关基因在RCC最常见亚型中的作用,包括透明细胞RCC(ccRCC),发色细胞RCC(chRCC),和乳头状RCC(PRCC)。
    BACKGROUND: The nuclear factor kappa B (NF-κB) is a critical pathway that regulates various cellular functions, including immune response, proliferation, growth, and apoptosis. Furthermore, this pathway is tightly regulated to ensure stability in the presence of immunogenic triggers or genotoxic stimuli. The lack of control of the NF-κB pathway can lead to the initiation of different diseases, mainly autoimmune diseases and cancer, including Renal cell carcinoma (RCC). RCC is the most common type of kidney cancer and is characterized by complex genetic composition and elusive molecular mechanisms.
    OBJECTIVE: The current review summarizes the mechanism of NF-κB dysregulation in different subtypes of RCC and its impact on pathogenesis.
    UNASSIGNED: This review highlights the prominent role of NF-κB in RCC development and progression by driving the expression of multiple genes and interplaying with different pathways, including the phosphatidylinositol 3-kinase (PI3K)/protein kinase B (Akt) pathway. In silico analysis of RCC cohorts and molecular studies have revealed that multiple NF-κB members and target genes are dysregulated. The dysregulation includes receptors such as TLR2, signal-transmitting members including RelA, and target genes, for instance, HIF-1α. The lack of effective regulatory mechanisms results in a constitutively active NF-κB pathway, which promotes cancer growth, migration, and survival. In this review, we comprehensively summarize the role of dysregulated NF-κB-related genes in the most common subtypes of RCC, including clear cell RCC (ccRCC), chromophobe RCC (chRCC), and papillary RCC (PRCC).
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  • 文章类型: Journal Article
    糖尿病(DM)是一种以高血糖为特征的代谢性疾病,导致各种血管并发症。越来越多的证据表明,内皮集落形成细胞(ECFC)在修复和恢复血管方面具有诱人的前景。因此,对于需要血运重建治疗的糖尿病患者,ECFCs可能是一种新的治疗选择。然而,据报道,糖尿病患者的ECFC功能受损,这对ECFCs的自体移植提出了挑战。在这次审查中,我们总结了可能导致ECFC功能障碍的分子机制,并讨论了改善DM患者ECFC疗效的潜在策略.最后,我们讨论了在人体研究中使用ECFCs的障碍,因为目前还没有公开报道在人体中使用这些细胞.
    Diabetes mellitus (DM) is a metabolic disease characterized by hyperglycemia, leading to various vascular complications. Accumulating evidence indicates that endothelial colony-forming cells (ECFCs) have attractive prospects for repairing and restoring blood vessels. Thus, ECFCs may be a novel therapeutic option for diabetic patients with vascular complications who require revascularization therapy. However, it has been reported that the function of ECFCs is impaired in DM, which poses challenges for the autologous transplantation of ECFCs. In this review, we summarize the molecular mechanisms that may be responsible for ECFC dysfunction and discuss potential strategies for improving the therapeutic efficacy of ECFCs derived from patients with DM. Finally, we discuss barriers to the use of ECFCs in human studies in light of the fact that there are no published reports using these cells in humans.
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    减少稻谷中的镉(Cd)污染对于确保粮食安全和促进可持续农业至关重要。由于其成本效益和操作简单,利用遗传修饰产生低Cd积累的水稻品种是一种有前途的策略。我们的研究表明,CRISPR-Cas9介导的多铜氧化酶基因OsLPR1/3/4/5在粳稻品种通经981中的四重突变对产量影响不大。然而,与Cd结合的细胞壁官能团显着增加。因此,OsLPR1/3/4/5的四重突变增强了细胞壁内的Cd固存,同时降低了木质部和韧皮部汁液中的Cd浓度,从而抑制Cd从根到芽的运输。因此,oslpr1/3/4/5四重突变体中糙米和稻壳中的Cd浓度(qm)分别下降了52%和55%,分别,与野生型相比。这些发现表明,OsLPR1/3/4/5的四重突变是在不影响产量的情况下最大程度地减少水稻籽粒中Cd污染的有效方法。因此,通过生物技术途径对OsLPR1/3/4/5进行的四重突变可能是产生低Cd积累的水稻新品种的有价值的策略。
    Minimizing cadmium (Cd) contamination in rice grains is crucial for ensuring food security and promoting sustainable agriculture. Utilizing genetic modification to generate rice varieties with low Cd accumulation is a promising strategy due to its cost-effectiveness and operational simplicity. Our study demonstrated that the CRISPR-Cas9-mediated quadruple mutation of the multicopper oxidase genes OsLPR1/3/4/5 in the japonica rice cultivar Tongjing 981 had little effect on yields. However, a notable increase was observed in the cell wall functional groups that bind with Cd. As a result, the quadruple mutation of OsLPR1/3/4/5 enhanced Cd sequestration within the cell wall while reducing Cd concentrations in both xylem and phloem sap, thereby inhibiting Cd transport from roots to shoots. Consequently, Cd concentrations in brown rice and husk in oslpr1/3/4/5 quadruple mutants (qm) decreased by 52% and 55%, respectively, compared to the wild-type. These findings illustrate that the quadruple mutation of OsLPR1/3/4/5 is an effective method for minimizing Cd contamination in rice grains without compromising yields. Therefore, the quadruple mutation of OsLPR1/3/4/5 via biotechnological pathways may represent a valuable strategy for the generation of new rice varieties with low Cd accumulation.
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  • 文章类型: Journal Article
    微生物生物膜是地球上最普遍的生命形式之一。微生物群落在各种表面上的形成对各个领域提出了重大挑战,包括医学,食品工业,航运,等。同时,这个过程也可以用于人类的利益-在生物修复,废水处理,和各种生物技术过程。使用电活性微生物生物膜的主要方向是将其纳入生物传感器和生物燃料电池的组成。它们在生物电化学装置中使用时的特性,以及这些结构在不同表面上形成的特征。特别关注应用基因工程最新进展的潜力,以改善基于微生物生物膜的设备的性能并调节其中发生的过程。最后,我们强调了在创建高效生物传感器和生物燃料电池中使用生物膜的缺点的可能方法。
    Microbial biofilms present one of the most widespread forms of life on Earth. The formation of microbial communities on various surfaces presents a major challenge in a variety of fields, including medicine, the food industry, shipping, etc. At the same time, this process can also be used for the benefit of humans-in bioremediation, wastewater treatment, and various biotechnological processes. The main direction of using electroactive microbial biofilms is their incorporation into the composition of biosensor and biofuel cells This review examines the fundamental knowledge acquired about the structure and formation of biofilms, the properties they have when used in bioelectrochemical devices, and the characteristics of the formation of these structures on different surfaces. Special attention is given to the potential of applying the latest advances in genetic engineering in order to improve the performance of microbial biofilm-based devices and to regulate the processes that take place within them. Finally, we highlight possible ways of dealing with the drawbacks of using biofilms in the creation of highly efficient biosensors and biofuel cells.
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  • 文章类型: Journal Article
    心脏移植与主要障碍有关,包括可供移植的器官数量有限,由于遗传差异而导致排斥的风险,和免疫抑制的负担。在这项研究中,我们证明了在离体灌注期间对心脏进行永久性基因工程的可行性。在常温EVHP的两个小时内,将编码靶向β2-微球蛋白(shβ2m)和II类反式激活因子(shCIITA)的短发夹RNA的慢病毒载体输送到移植物。在内皮细胞和心肌细胞中稳定表达的报告基因表明了高效的基因工程。值得注意的是,猪白细胞抗原(SLA)Ⅰ类和SLAⅡ类的表达水平分别下降了66%和76%,分别,在血管内皮。乳酸的评价,肌钙蛋白T,灌注液中的LDH水平和组织学分析显示,没有由慢病毒载体引起的其他细胞损伤或组织损伤。此外,未转导和慢病毒载体转导的心脏的细胞因子分泌谱(IL-6,IL-8和TNF-α)相当。这项研究证明了在不损害组织完整性的情况下离体产生基因工程心脏。SLA表达的下调可能有助于降低心脏的免疫原性并支持同种异体或异种移植后的移植物存活。
    Heart transplantation is associated with major hurdles, including the limited number of available organs for transplantation, the risk of rejection due to genetic discrepancies, and the burden of immunosuppression. In this study, we demonstrated the feasibility of permanent genetic engineering of the heart during ex vivo perfusion. Lentiviral vectors encoding for short hairpin RNAs targeting beta2-microglobulin (shβ2m) and class II transactivator (shCIITA) were delivered to the graft during two hours of normothermic EVHP. Highly efficient genetic engineering was indicated by stable reporter gene expression in endothelial cells and cardiomyocytes. Remarkably, swine leucocyte antigen (SLA) class I and SLA class II expression levels were decreased by 66% and 76%, respectively, in the vascular endothelium. Evaluation of lactate, troponin T, and LDH levels in the perfusate and histological analysis showed no additional cell injury or tissue damage caused by lentiviral vectors. Moreover, cytokine secretion profiles (IL-6, IL-8, and TNF-α) of non-transduced and lentiviral vector-transduced hearts were comparable. This study demonstrated the ex vivo generation of genetically engineered hearts without compromising tissue integrity. Downregulation of SLA expression may contribute to reduce the immunogenicity of the heart and support graft survival after allogeneic or xenogeneic transplantation.
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    虾青素是一种有价值的橙红色类胡萝卜素,在农业中具有广泛的应用。食物,化妆品,制药和营养食品领域。目前,虾青素的生物合成主要依靠雨生红球藻和枝状叶黄素菌。随着合成生物学的迅速发展,更多的重组微生物宿主已经被基因构建用于虾青素生产,包括大肠杆菌,酿酒酵母和解脂耶氏酵母。由于多个基因(15)参与虾青素的合成,采用不同的策略来平衡虾青素合成的代谢流尤为重要。此外,虾青素是一种储存在细胞内的脂溶性化合物,因此,有效的提取方法对于虾青素的经济生产也是必不可少的。近年来报道了几种高效绿色提取虾青素的方法,包括超流体提取,离子液体萃取和微波辅助萃取。因此,本文将全面介绍利用不同的微生物宿主和提高虾青素合成和提取效率的策略在虾青素生产和提取方面的研究进展。
    Astaxanthin is a valuable orange-red carotenoid with wide applications in agriculture, food, cosmetics, pharmaceuticals and nutraceuticals areas. At present, the biological synthesis of astaxanthin mainly relies on Haematococcus pluvialis and Xanthophyllomyces dendrorhous. With the rapid development of synthetic biology, more recombinant microbial hosts have been genetically constructed for astaxanthin production including Escherichia coli, Saccharomyces cerevisiae and Yarrowia lipolytica. As multiple genes (15) were involved in the astaxanthin synthesis, it is particularly important to adopt different strategies to balance the metabolic flow towards the astaxanthin synthesis. Furthermore, astaxanthin is a fat-soluble compound stored intracellularly, hence efficient extraction methods are also essential for the economical production of astaxanthin. Several efficient and green extraction methods of astaxanthin have been reported in recent years, including the superfluid extraction, ionic liquid extraction and microwave-assisted extraction. Accordingly, this review will comprehensively introduce the advances on the astaxanthin production and extraction by using different microbial hosts and strategies to improve the astaxanthin synthesis and extraction efficiency.
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  • 文章类型: Journal Article
    有关环境状况的信息对于实现欧洲绿色协议的目标很重要,包括欧盟2030年生物多样性战略。现有的转基因生物(GMOs)法规规定必须对释放到环境中的潜在不利影响进行强制性的上市后环境监测(PMEM)。到目前为止,转基因生物监测活动集中在转基因作物上。随着新基因组技术(NGT)的出现,新的GMO应用程序正在开发中,可能会发布到一系列不同的对生态系统和生物多样性有潜在影响的非农业环境。这对当前的监控概念提出了挑战,并要求对现有监控程序进行调整以满足监控要求。虽然将现有的生物多样性监测计划纳入国家一级的转基因生物监测很重要,还需要额外的监测活动。使用案例示例,我们强调,新型转基因生物应用的监测要求与欧盟先前授权商业使用的转基因作物植物的监测要求不同。
    Information on the state of the environment is important to achieve the objectives of the European Green Deal, including the EU\'s Biodiversity Strategy for 2030. The existing regulatory provisions for genetically modified organisms (GMOs) foresee an obligatory post-market environmental monitoring (PMEM) of potential adverse effects upon release into the environment. So far, GMO monitoring activities have focused on genetically modified crops. With the advent of new genomic techniques (NGT), novel GMO applications are being developed and may be released into a range of different, non-agricultural environments with potential implications for ecosystems and biodiversity. This challenges the current monitoring concepts and requires adaptation of existing monitoring programs to meet monitoring requirements. While the incorporation of existing biodiversity monitoring programs into GMO monitoring at the national level is important, additional monitoring activities will also be required. Using case examples, we highlight that monitoring requirements for novel GMO applications differ from those of GM crop plants previously authorized for commercial use in the European Union.
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