Genetic modification

遗传修饰
  • 文章类型: Editorial
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  • 文章类型: Journal Article
    减少稻谷中的镉(Cd)污染对于确保粮食安全和促进可持续农业至关重要。由于其成本效益和操作简单,利用遗传修饰产生低Cd积累的水稻品种是一种有前途的策略。我们的研究表明,CRISPR-Cas9介导的多铜氧化酶基因OsLPR1/3/4/5在粳稻品种通经981中的四重突变对产量影响不大。然而,与Cd结合的细胞壁官能团显着增加。因此,OsLPR1/3/4/5的四重突变增强了细胞壁内的Cd固存,同时降低了木质部和韧皮部汁液中的Cd浓度,从而抑制Cd从根到芽的运输。因此,oslpr1/3/4/5四重突变体中糙米和稻壳中的Cd浓度(qm)分别下降了52%和55%,分别,与野生型相比。这些发现表明,OsLPR1/3/4/5的四重突变是在不影响产量的情况下最大程度地减少水稻籽粒中Cd污染的有效方法。因此,通过生物技术途径对OsLPR1/3/4/5进行的四重突变可能是产生低Cd积累的水稻新品种的有价值的策略。
    Minimizing cadmium (Cd) contamination in rice grains is crucial for ensuring food security and promoting sustainable agriculture. Utilizing genetic modification to generate rice varieties with low Cd accumulation is a promising strategy due to its cost-effectiveness and operational simplicity. Our study demonstrated that the CRISPR-Cas9-mediated quadruple mutation of the multicopper oxidase genes OsLPR1/3/4/5 in the japonica rice cultivar Tongjing 981 had little effect on yields. However, a notable increase was observed in the cell wall functional groups that bind with Cd. As a result, the quadruple mutation of OsLPR1/3/4/5 enhanced Cd sequestration within the cell wall while reducing Cd concentrations in both xylem and phloem sap, thereby inhibiting Cd transport from roots to shoots. Consequently, Cd concentrations in brown rice and husk in oslpr1/3/4/5 quadruple mutants (qm) decreased by 52% and 55%, respectively, compared to the wild-type. These findings illustrate that the quadruple mutation of OsLPR1/3/4/5 is an effective method for minimizing Cd contamination in rice grains without compromising yields. Therefore, the quadruple mutation of OsLPR1/3/4/5 via biotechnological pathways may represent a valuable strategy for the generation of new rice varieties with low Cd accumulation.
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  • 文章类型: Journal Article
    虾青素是一种有价值的橙红色类胡萝卜素,在农业中具有广泛的应用。食物,化妆品,制药和营养食品领域。目前,虾青素的生物合成主要依靠雨生红球藻和枝状叶黄素菌。随着合成生物学的迅速发展,更多的重组微生物宿主已经被基因构建用于虾青素生产,包括大肠杆菌,酿酒酵母和解脂耶氏酵母。由于多个基因(15)参与虾青素的合成,采用不同的策略来平衡虾青素合成的代谢流尤为重要。此外,虾青素是一种储存在细胞内的脂溶性化合物,因此,有效的提取方法对于虾青素的经济生产也是必不可少的。近年来报道了几种高效绿色提取虾青素的方法,包括超流体提取,离子液体萃取和微波辅助萃取。因此,本文将全面介绍利用不同的微生物宿主和提高虾青素合成和提取效率的策略在虾青素生产和提取方面的研究进展。
    Astaxanthin is a valuable orange-red carotenoid with wide applications in agriculture, food, cosmetics, pharmaceuticals and nutraceuticals areas. At present, the biological synthesis of astaxanthin mainly relies on Haematococcus pluvialis and Xanthophyllomyces dendrorhous. With the rapid development of synthetic biology, more recombinant microbial hosts have been genetically constructed for astaxanthin production including Escherichia coli, Saccharomyces cerevisiae and Yarrowia lipolytica. As multiple genes (15) were involved in the astaxanthin synthesis, it is particularly important to adopt different strategies to balance the metabolic flow towards the astaxanthin synthesis. Furthermore, astaxanthin is a fat-soluble compound stored intracellularly, hence efficient extraction methods are also essential for the economical production of astaxanthin. Several efficient and green extraction methods of astaxanthin have been reported in recent years, including the superfluid extraction, ionic liquid extraction and microwave-assisted extraction. Accordingly, this review will comprehensively introduce the advances on the astaxanthin production and extraction by using different microbial hosts and strategies to improve the astaxanthin synthesis and extraction efficiency.
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  • 文章类型: Journal Article
    蛹虫草是一种重要的食用菌,可产生多种生物活性化合物。我们先前已经建立了尿苷/尿嘧啶营养缺陷型突变体和相应的根癌农杆菌介导的转化(ATMT)系统,用于使用pyrG作为筛选标记在c中进行遗传表征。在这项研究中,我们构建了一个基于双pyrG和hisB营养缺陷型突变体的ATMT系统。使用尿苷/尿嘧啶营养缺陷型突变体作为背景,pyrG作为选择标记,编码咪唑甘油磷酸脱水酶的hisB基因,组氨酸生物合成所需的,通过同源重组敲除,构建组氨酸营养缺陷型miliaris突变体。然后,删除组氨酸营养缺陷型突变体中的pyrG以构建ΔpyrGΔhisB双重营养缺陷型突变体。Further,我们以GFP和DsRed为报告基因,建立了基于双重营养缺陷型的ATMT转化体系。最后,为了证明这种双重转化系统在基因功能研究中的应用,在双营养缺陷型C中进行了感光基因CmWC-1的敲除和互补。具有组氨酸和尿苷/尿嘧啶营养缺陷型标记的新构建的ATMT系统为药用真菌C.milaris的遗传修饰提供了有希望的工具。
    Cordyceps militaris is a significant edible fungus that produces a variety of bioactive compounds. We have previously established a uridine/uracil auxotrophic mutant and a corresponding Agrobacterium tumefaciens-mediated transformation (ATMT) system for genetic characterization in C. militaris using pyrG as a screening marker. In this study, we constructed an ATMT system based on a dual pyrG and hisB auxotrophic mutant of C. militaris. Using the uridine/uracil auxotrophic mutant as the background and pyrG as a selection marker, the hisB gene encoding imidazole glycerophosphate dehydratase, required for histidine biosynthesis, was knocked out by homologous recombination to construct a histidine auxotrophic C. militaris mutant. Then, pyrG in the histidine auxotrophic mutant was deleted to construct a ΔpyrG ΔhisB dual auxotrophic mutant. Further, we established an ATMT transformation system based on the dual auxotrophic C. militaris by using GFP and DsRed as reporter genes. Finally, to demonstrate the application of this dual transformation system for studies of gene function, knock out and complementation of the photoreceptor gene CmWC-1 in the dual auxotrophic C. militaris were performed. The newly constructed ATMT system with histidine and uridine/uracil auxotrophic markers provides a promising tool for genetic modifications in the medicinal fungus C. militaris.
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  • 文章类型: Journal Article
    Hereditary hearing loss (HHL), a genetic disorder that impairs auditory function, significantly affects quality of life and incurs substantial economic losses for society. To investigate the underlying causes of HHL and evaluate therapeutic outcomes, appropriate animal models are necessary. Pigs have been extensively used as valuable large animal models in biomedical research. In this review, we highlight the advantages of pig models in terms of ear anatomy, inner ear morphology, and electrophysiological characteristics, as well as recent advancements in the development of distinct genetically modified porcine models of hearing loss. Additionally, we discuss the prospects, challenges, and recommendations regarding the use pig models in HHL research. Overall, this review provides insights and perspectives for future studies on HHL using porcine models.
    遗传性听力损失是一种影响听觉功能的遗传性疾病,严重影响人类生活质量,并导致社会经济损失。为了研究其病因并评估治疗效果,亟需适当的动物模型。猪作为有价值的大动物模型,已经在生物医学研究中获得广泛使用。在该综述中,我们强调了猪模型在耳部解剖学、内耳形态学和电生理特性方面的优势,以及近期在开发各种遗传修饰的听力损失猪模型方面的进展。此外,我们还讨论了在遗传性听力损失研究中使用猪模型的前景、挑战和建议。总之,该综述为未来使用猪模型进行遗传性听力损失研究提供了洞察和观点。.
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  • 文章类型: Journal Article
    背景:基因编辑技术在濒危动植物保护领域的应用在拯救濒危动植物种群方面具有创新性和前瞻性价值,但它也对生态环境和生物伦理规范提出了挑战。基因编辑影响了我国动植物保护法律制度,本研究旨在为我国规范濒危动植物基因编辑提供解决方案。研究认为,我国应就濒危动植物的基因编辑问题制定具体立法,遵守生物安全的概念,并旨在维持生物多样性和生态平衡;在生态环境部门的监督下,濒危动植物的基因编辑调控应采用“产品与过程相结合”的混合模式,建立登记制度,标签,和责任。基因编辑的濒危动植物所有权应坚持复合所有权模式,承认国家,集体和个人都可以是合法授权范围内的所有者。
    BACKGROUND: The application of gene editing technology in the field of endangered plant and animal conservation has innovative and prospective value in saving endangered plant and animal populations, but it also poses challenges to the ecological environment and bioethical norms. Gene editing has impacted China\'s animal and plant protection legal system, and this study aims to provide solutions for China to regulate gene editing of endangered plants and animals. The study concludes that China should enact specific legislation on gene editing of endangered plants and animals, abide by the concept of biosafety, and aim to maintain biodiversity and ecological balance; under the supervision of the ecological and environmental departments, the regulation of gene editing of endangered plants and animals should adopt a hybrid model of \"combining the product and the process\", and establish a system of registration, labeling, and responsibility. The ownership of gene-edited endangered animals and plants should adhere to the compound ownership model, recognizing that the State, collectives and individuals can all be owners within the scope of legal authorization.
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  • 文章类型: Journal Article
    背景:将植物生物质生物转化为生物燃料和生物产品会产生大量的木质素。芳族生物聚合物在转化为增值生物产品之前需要降解。微生物可以是环境友好的并且可以有效地降解木质素。与真菌相比,细菌在木质素降解中具有一定的优势,包括对pH的广泛耐受性,温度,氧气和遗传操作的工具包。
    结果:我们先前的研究分离出了一种新的木质素降解细菌菌株欧文氏菌QL-Z3。在优化条件下,以1.5g/L木质素为唯一碳源时,木质素降解率为25.24%。全基因组测序显示QL-Z3基因组中有4556个基因。在4428个蛋白质编码基因中,有139个CAZyme基因,包括54个糖苷水解酶(GH)和16个辅助活性(AA)基因。此外,74个编码胞外酶的基因可能参与木质素降解。实时PCR定量表明,木质素显着诱导了潜在的木质素降解基因的表达。构建了8个敲除突变体和互补菌株。破坏ELAC_205(漆酶)和EDYP_48(Dyp型过氧化物酶)的基因,ESOD_1236(超氧化物歧化酶),EDIO_858(双加氧酶),EMON_3330(单加氧酶),或EMCAT_3587(锰过氧化氢酶)可将QL-Z3的木质素降解活性显着降低47-69%。异源表达和纯化的酶进一步证实了它们在木质素降解中的作用。傅里叶变换红外光谱(FTIR)结果表明木质素结构被破坏,打开了大分子的苯环结构和基团,化学键在基因编码的六种酶的作用下断裂。通过液相色谱-质谱(LC-MS)分析,系统分析了EDYP_48、ELAC_205和ESOD_1236的丰富酶代谢产物,然后提供木质素生物降解的推测途径。最后,发酵上清液中木质素分解酶的活性,即,LiP,MnP和Lac为367.50U/L,839.50U/L,和219.00U/L正交优化。
    结论:我们的发现表明,QL-Z3及其酶具有工业应用的潜力,并且在木质素的价值化中将木质素生物转化为生物产品具有广阔的前景。
    BACKGROUND: Bioconversion of plant biomass into biofuels and bio-products produces large amounts of lignin. The aromatic biopolymers need to be degraded before being converted into value-added bio-products. Microbes can be environment-friendly and efficiently degrade lignin. Compared to fungi, bacteria have some advantages in lignin degradation, including broad tolerance to pH, temperature, and oxygen and the toolkit for genetic manipulation.
    RESULTS: Our previous study isolated a novel ligninolytic bacterial strain Erwinia billingiae QL-Z3. Under optimized conditions, its rate of lignin degradation was 25.24% at 1.5 g/L lignin as the sole carbon source. Whole genome sequencing revealed 4556 genes in the genome of QL-Z3. Among 4428 protein-coding genes are 139 CAZyme genes, including 54 glycoside hydrolase (GH) and 16 auxiliary activity (AA) genes. In addition, 74 genes encoding extracellular enzymes are potentially involved in lignin degradation. Real-time PCR quantification demonstrated that the expression of potential ligninolytic genes were significantly induced by lignin. 8 knock-out mutants and complementary strains were constructed. Disruption of the gene for ELAC_205 (laccase) as well as EDYP_48 (Dyp-type peroxidase), ESOD_1236 (superoxide dismutase), EDIO_858 (dioxygenase), EMON_3330 (monooxygenase), or EMCAT_3587 (manganese catalase) significantly reduced the lignin-degrading activity of QL-Z3 by 47-69%. Heterologously expressed and purified enzymes further confirmed their role in lignin degradation. Fourier transform infrared spectroscopy (FTIR) results indicated that the lignin structure was damaged, the benzene ring structure and groups of macromolecules were opened, and the chemical bond was broken under the action of six enzymes encoded by genes. The abundant enzymatic metabolic products by EDYP_48, ELAC_205 and ESOD_1236 were systematically analyzed via liquid chromatography-mass spectrometry (LC-MS) analysis, and then provide a speculative pathway for lignin biodegradation. Finally, The activities of ligninolytic enzymes from fermentation supernatant, namely, LiP, MnP and Lac were 367.50 U/L, 839.50 U/L, and 219.00 U/L by orthogonal optimization.
    CONCLUSIONS: Our findings provide that QL-Z3 and its enzymes have the potential for industrial application and hold great promise for the bioconversion of lignin into bioproducts in lignin valorization.
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  • 文章类型: Journal Article
    细菌纤维素(BC),一种纳米结构的材料,以其优异的性能而闻名。然而,由于培养基利用率和转化率低,细菌生产的成本很高。为了提高BC的产量,这项研究旨在通过基因改造来提高BC产量,特别是通过在木葡糖醋杆菌中过表达bcsC和bcsD,并通过开发一种改良的培养方法,通过在发酵过程中添加水来降低培养基粘度。因此,从过表达基因bcsC的菌株获得5.4、6.2和6.8g/L的BC产量,bcsD,和bcsCD,显着超过野生型(WT)菌株2.2g/L的产量。在改良的文化中,在发酵过程中添加20mL水,所有四个菌株的BC产量增加>1g/L。在比较BC的属性后,在WT和pbcsC菌株之间观察到最小差异,以及静态和修改后的文化之间。相比之下,过表达bcsD的菌株产生的BC具有更致密的微结构网络,并表现出更高的拉伸强度和断裂伸长率。与WT相比,来自bcsD过表达菌株的BC也显示出增强的结晶度,较高的聚合度和改善的热稳定性。
    Bacterial cellulose (BC), a nanostructured material, is renowned for its excellent properties. However, its production by bacteria is costly due to low medium utilization and conversion rates. To enhance the yield of BC, this study aimed to increase BC yield through genetic modification, specifically by overexpressing bcsC and bcsD in Gluconacetobacter xylinus, and by developing a modified culture method to reduce medium viscosity by adding water during fermentation. As a result, BC yields of 5.4, 6.2, and 6.8 g/L were achieved from strains overexpressing genes bcsC, bcsD, and bcsCD, significantly surpassing the yield of 2.2 g/L from wild-type (WT) strains. In the modified culture, the BC yields of all four strains increased by >1 g/L with the addition of 20 mL of water during fermentation. Upon comparing the properties of BC, minimal differences were observed between the WT and pbcsC strains, as well as between the static and modified cultures. In contrast, BC produced by strains overexpressing bcsD had a denser microstructural network and exhibited demonstrated higher tensile strength and elongation-to-break. Compared to WT, BC from bcsD overexpressed strains also displayed enhanced crystallinity, higher degree of polymerization and improved thermal stability.
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  • 文章类型: Journal Article
    在体外维持B细胞的恒定生长特征和抗体表达的人B细胞永生化对于开发用于人类疾病诊断和生物治疗的抗体药物和产品非常关键。人B细胞永生化方法包括EB病毒(EBV)转化,猿猴病毒40(SV40)病毒感染,体外遗传修饰,和激活CD40等。永生化人B细胞非常有效地产生单克隆抗体(mAb),以这种方式产生的抗体可以克服异源抗体引起的免疫排斥。它是制备单克隆抗体的有效途径和开发治疗性单克隆抗体的重要方法。目前,美国FDA已经批准了100多种单克隆抗体,用于治疗癌症等多种疾病。自身免疫性疾病,传染病,和神经系统疾病。本文就人类B细胞永生化的研究进展作一综述,其方法,以及未来的发展方向,因为它是发展单克隆抗体制备技术的有力工具。
    Human B cell immortalization that maintains the constant growth characteristics and antibody expression of B cells in vitro is very critical for the development of antibody drugs and products for the diagnosis and bio-therapeutics of human diseases. Human B cell immortalization methods include Epstein-Barr virus (EBV) transformation, Simian virus 40 (SV40) virus infection, in vitro genetic modification, and activating CD40, etc. Immortalized human B cells produce monoclonal antibodies (mAbs) very efficiently, and the antibodies produced in this way can overcome the immune rejection caused by heterologous antibodies. It is an effective way to prepare mAbs and an important method for developing therapeutic monoclonal antibodies. Currently, the US FDA has approved more than 100 mAbs against a wide range of illnesses such as cancer, autoimmune diseases, infectious diseases, and neurological disorders. This paper reviews the research progress of human B cell immortalization, its methods, and future directions as it is a powerful tool for the development of monoclonal antibody preparation technology.
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  • 文章类型: Journal Article
    干细胞疗法作为广泛的难治性疾病的可行治疗具有巨大的潜力。由于干细胞移植的安全性已在许多临床试验中得到证明,各种干细胞目前用于医疗应用。尽管取得了成就,干细胞对疾病的治疗益处是有限的,临床研究数据不稳定。为了优化干细胞的有效性,已经开发了工程方法来增强它们的固有能力并赋予它们新的功能,为下一代干细胞疗法铺平道路。这篇综述提供了工程干细胞的详细分析,包括其临床应用和未来发展潜力。我们首先简要介绍干细胞生产的最新进展(诱导多能干细胞(iPSCs),胚胎干细胞(ESC),间充质干细胞(MSCs)和造血干细胞(HSCs)。此外,我们介绍了干细胞工程策略的最新进展,包括分子生物学和生物材料领域的工程方法,以及它们在生物医学研究中的应用。最后,我们总结了目前的障碍,并提出了工程干细胞在临床翻译和生物医学应用中的未来前景。
    Stem cell therapy holds immense potential as a viable treatment for a widespread range of intractable disorders. As the safety of stem cell transplantation having been demonstrated in numerous clinical trials, various kinds of stem cells are currently utilized in medical applications. Despite the achievements, the therapeutic benefits of stem cells for diseases are limited, and the data of clinical researches are unstable. To optimize tthe effectiveness of stem cells, engineering approaches have been developed to enhance their inherent abilities and impart them with new functionalities, paving the way for the next generation of stem cell therapies. This review offers a detailed analysis of engineered stem cells, including their clinical applications and potential for future development. We begin by briefly introducing the recent advances in the production of stem cells (induced pluripotent stem cells (iPSCs), embryonic stem cells (ESCs), mesenchymal stem cells (MSCs) and hematopoietic stem cells (HSCs)). Furthermore, we present the latest developments of engineered strategies in stem cells, including engineered methods in molecular biology and biomaterial fields, and their application in biomedical research. Finally, we summarize the current obstacles and suggest future prospects for engineered stem cells in clinical translations and biomedical applications.
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