Genetic modification

遗传修饰
  • 文章类型: Journal Article
    减少稻谷中的镉(Cd)污染对于确保粮食安全和促进可持续农业至关重要。由于其成本效益和操作简单,利用遗传修饰产生低Cd积累的水稻品种是一种有前途的策略。我们的研究表明,CRISPR-Cas9介导的多铜氧化酶基因OsLPR1/3/4/5在粳稻品种通经981中的四重突变对产量影响不大。然而,与Cd结合的细胞壁官能团显着增加。因此,OsLPR1/3/4/5的四重突变增强了细胞壁内的Cd固存,同时降低了木质部和韧皮部汁液中的Cd浓度,从而抑制Cd从根到芽的运输。因此,oslpr1/3/4/5四重突变体中糙米和稻壳中的Cd浓度(qm)分别下降了52%和55%,分别,与野生型相比。这些发现表明,OsLPR1/3/4/5的四重突变是在不影响产量的情况下最大程度地减少水稻籽粒中Cd污染的有效方法。因此,通过生物技术途径对OsLPR1/3/4/5进行的四重突变可能是产生低Cd积累的水稻新品种的有价值的策略。
    Minimizing cadmium (Cd) contamination in rice grains is crucial for ensuring food security and promoting sustainable agriculture. Utilizing genetic modification to generate rice varieties with low Cd accumulation is a promising strategy due to its cost-effectiveness and operational simplicity. Our study demonstrated that the CRISPR-Cas9-mediated quadruple mutation of the multicopper oxidase genes OsLPR1/3/4/5 in the japonica rice cultivar Tongjing 981 had little effect on yields. However, a notable increase was observed in the cell wall functional groups that bind with Cd. As a result, the quadruple mutation of OsLPR1/3/4/5 enhanced Cd sequestration within the cell wall while reducing Cd concentrations in both xylem and phloem sap, thereby inhibiting Cd transport from roots to shoots. Consequently, Cd concentrations in brown rice and husk in oslpr1/3/4/5 quadruple mutants (qm) decreased by 52% and 55%, respectively, compared to the wild-type. These findings illustrate that the quadruple mutation of OsLPR1/3/4/5 is an effective method for minimizing Cd contamination in rice grains without compromising yields. Therefore, the quadruple mutation of OsLPR1/3/4/5 via biotechnological pathways may represent a valuable strategy for the generation of new rice varieties with low Cd accumulation.
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  • 文章类型: Journal Article
    微生物生物膜是地球上最普遍的生命形式之一。微生物群落在各种表面上的形成对各个领域提出了重大挑战,包括医学,食品工业,航运,等。同时,这个过程也可以用于人类的利益-在生物修复,废水处理,和各种生物技术过程。使用电活性微生物生物膜的主要方向是将其纳入生物传感器和生物燃料电池的组成。它们在生物电化学装置中使用时的特性,以及这些结构在不同表面上形成的特征。特别关注应用基因工程最新进展的潜力,以改善基于微生物生物膜的设备的性能并调节其中发生的过程。最后,我们强调了在创建高效生物传感器和生物燃料电池中使用生物膜的缺点的可能方法。
    Microbial biofilms present one of the most widespread forms of life on Earth. The formation of microbial communities on various surfaces presents a major challenge in a variety of fields, including medicine, the food industry, shipping, etc. At the same time, this process can also be used for the benefit of humans-in bioremediation, wastewater treatment, and various biotechnological processes. The main direction of using electroactive microbial biofilms is their incorporation into the composition of biosensor and biofuel cells This review examines the fundamental knowledge acquired about the structure and formation of biofilms, the properties they have when used in bioelectrochemical devices, and the characteristics of the formation of these structures on different surfaces. Special attention is given to the potential of applying the latest advances in genetic engineering in order to improve the performance of microbial biofilm-based devices and to regulate the processes that take place within them. Finally, we highlight possible ways of dealing with the drawbacks of using biofilms in the creation of highly efficient biosensors and biofuel cells.
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  • 文章类型: Journal Article
    心脏移植与主要障碍有关,包括可供移植的器官数量有限,由于遗传差异而导致排斥的风险,和免疫抑制的负担。在这项研究中,我们证明了在离体灌注期间对心脏进行永久性基因工程的可行性。在常温EVHP的两个小时内,将编码靶向β2-微球蛋白(shβ2m)和II类反式激活因子(shCIITA)的短发夹RNA的慢病毒载体输送到移植物。在内皮细胞和心肌细胞中稳定表达的报告基因表明了高效的基因工程。值得注意的是,猪白细胞抗原(SLA)Ⅰ类和SLAⅡ类的表达水平分别下降了66%和76%,分别,在血管内皮。乳酸的评价,肌钙蛋白T,灌注液中的LDH水平和组织学分析显示,没有由慢病毒载体引起的其他细胞损伤或组织损伤。此外,未转导和慢病毒载体转导的心脏的细胞因子分泌谱(IL-6,IL-8和TNF-α)相当。这项研究证明了在不损害组织完整性的情况下离体产生基因工程心脏。SLA表达的下调可能有助于降低心脏的免疫原性并支持同种异体或异种移植后的移植物存活。
    Heart transplantation is associated with major hurdles, including the limited number of available organs for transplantation, the risk of rejection due to genetic discrepancies, and the burden of immunosuppression. In this study, we demonstrated the feasibility of permanent genetic engineering of the heart during ex vivo perfusion. Lentiviral vectors encoding for short hairpin RNAs targeting beta2-microglobulin (shβ2m) and class II transactivator (shCIITA) were delivered to the graft during two hours of normothermic EVHP. Highly efficient genetic engineering was indicated by stable reporter gene expression in endothelial cells and cardiomyocytes. Remarkably, swine leucocyte antigen (SLA) class I and SLA class II expression levels were decreased by 66% and 76%, respectively, in the vascular endothelium. Evaluation of lactate, troponin T, and LDH levels in the perfusate and histological analysis showed no additional cell injury or tissue damage caused by lentiviral vectors. Moreover, cytokine secretion profiles (IL-6, IL-8, and TNF-α) of non-transduced and lentiviral vector-transduced hearts were comparable. This study demonstrated the ex vivo generation of genetically engineered hearts without compromising tissue integrity. Downregulation of SLA expression may contribute to reduce the immunogenicity of the heart and support graft survival after allogeneic or xenogeneic transplantation.
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  • 文章类型: Editorial
    暂无摘要。
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  • 文章类型: Journal Article
    虾青素是一种有价值的橙红色类胡萝卜素,在农业中具有广泛的应用。食物,化妆品,制药和营养食品领域。目前,虾青素的生物合成主要依靠雨生红球藻和枝状叶黄素菌。随着合成生物学的迅速发展,更多的重组微生物宿主已经被基因构建用于虾青素生产,包括大肠杆菌,酿酒酵母和解脂耶氏酵母。由于多个基因(15)参与虾青素的合成,采用不同的策略来平衡虾青素合成的代谢流尤为重要。此外,虾青素是一种储存在细胞内的脂溶性化合物,因此,有效的提取方法对于虾青素的经济生产也是必不可少的。近年来报道了几种高效绿色提取虾青素的方法,包括超流体提取,离子液体萃取和微波辅助萃取。因此,本文将全面介绍利用不同的微生物宿主和提高虾青素合成和提取效率的策略在虾青素生产和提取方面的研究进展。
    Astaxanthin is a valuable orange-red carotenoid with wide applications in agriculture, food, cosmetics, pharmaceuticals and nutraceuticals areas. At present, the biological synthesis of astaxanthin mainly relies on Haematococcus pluvialis and Xanthophyllomyces dendrorhous. With the rapid development of synthetic biology, more recombinant microbial hosts have been genetically constructed for astaxanthin production including Escherichia coli, Saccharomyces cerevisiae and Yarrowia lipolytica. As multiple genes (15) were involved in the astaxanthin synthesis, it is particularly important to adopt different strategies to balance the metabolic flow towards the astaxanthin synthesis. Furthermore, astaxanthin is a fat-soluble compound stored intracellularly, hence efficient extraction methods are also essential for the economical production of astaxanthin. Several efficient and green extraction methods of astaxanthin have been reported in recent years, including the superfluid extraction, ionic liquid extraction and microwave-assisted extraction. Accordingly, this review will comprehensively introduce the advances on the astaxanthin production and extraction by using different microbial hosts and strategies to improve the astaxanthin synthesis and extraction efficiency.
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  • 文章类型: Journal Article
    有关环境状况的信息对于实现欧洲绿色协议的目标很重要,包括欧盟2030年生物多样性战略。现有的转基因生物(GMOs)法规规定必须对释放到环境中的潜在不利影响进行强制性的上市后环境监测(PMEM)。到目前为止,转基因生物监测活动集中在转基因作物上。随着新基因组技术(NGT)的出现,新的GMO应用程序正在开发中,可能会发布到一系列不同的对生态系统和生物多样性有潜在影响的非农业环境。这对当前的监控概念提出了挑战,并要求对现有监控程序进行调整以满足监控要求。虽然将现有的生物多样性监测计划纳入国家一级的转基因生物监测很重要,还需要额外的监测活动。使用案例示例,我们强调,新型转基因生物应用的监测要求与欧盟先前授权商业使用的转基因作物植物的监测要求不同。
    Information on the state of the environment is important to achieve the objectives of the European Green Deal, including the EU\'s Biodiversity Strategy for 2030. The existing regulatory provisions for genetically modified organisms (GMOs) foresee an obligatory post-market environmental monitoring (PMEM) of potential adverse effects upon release into the environment. So far, GMO monitoring activities have focused on genetically modified crops. With the advent of new genomic techniques (NGT), novel GMO applications are being developed and may be released into a range of different, non-agricultural environments with potential implications for ecosystems and biodiversity. This challenges the current monitoring concepts and requires adaptation of existing monitoring programs to meet monitoring requirements. While the incorporation of existing biodiversity monitoring programs into GMO monitoring at the national level is important, additional monitoring activities will also be required. Using case examples, we highlight that monitoring requirements for novel GMO applications differ from those of GM crop plants previously authorized for commercial use in the European Union.
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  • 文章类型: Journal Article
    尽管医学生物学和分子生物学领域的新工具和新技术取得了重大进展,在大多数癌症类型的治疗中的挑战仍然是恒定的,同时存在对药物产生耐药性的问题,并且癌症患者的总体生存率没有显著提高.免疫疗法在治疗各种癌症的不同临床和临床前试验中显示出最有希望的结果,因为与常规化疗和放疗相比,它在许多癌症患者中具有更高的疗效和最小的附带损害。溶瘤病毒是一类新的免疫疗法,可以在肿瘤细胞中选择性复制并通过细胞裂解过程破坏它们,同时对正常细胞产生最小或无影响。除此之外,它还可以激活宿主的先天免疫系统,产生抗肿瘤免疫反应以消除肿瘤细胞。已经研究了几种野生型和遗传修饰的病毒以显示溶瘤行为。痘苗病毒已被广泛研究,并在各种模型系统和临床试验中测试了其有前途的溶瘤性质。最近,已经开发了几种工程牛痘病毒,它们表达所需的基因,这些基因被编码用于在肿瘤细胞中选择性渗透并增强免疫系统的激活以产生抗肿瘤免疫。然而,需要进一步调查以证明其潜力并提高其治疗效果。
    Despite the significant advancement of new tools and technology in the field of medical biology and molecular biology, the challenges in the treatment of most cancer types remain constant with the problem of developing resistance toward drugs and no substantial enhancement in the overall survival rate of cancer patients. Immunotherapy has shown the most promising results in different clinical and preclinical trials in the treatment of various cancer due to its higher efficacy and minimum collateral damage in many cancer patients as compared to conventional chemotherapy and radiotherapy. An oncolytic virus is a new class of immunotherapy that can selectively replicate in tumor cells and destroy them by the process of cell lysis while exerting minimum or no effect on a normal cell. Besides this, it can also activate the host\'s innate immune system, which generates an anti-tumor immune response to eliminate the tumor cells. Several wild types and genetically modified viruses have been investigated to show oncolytic behavior. Vaccinia virus has been studied extensively and tested for its promising oncolytic nature on various model systems and clinical trials. Recently, several engineered vaccinia viruses have been developed that express the desired genes encoded for selective penetration in tumor cells and enhanced activation of the immune system for generating anti-tumor immunity. However, further investigation is required to prove their potential and enhance their therapeutic efficacy.
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  • 文章类型: Journal Article
    基因编辑(GnEd)涉及使用定点核酸酶在基因组中的靶向位置处引入双链断裂(DSB)。对GnEd在动物中用于农业应用进行了文献检索。数据是从212篇同行评审的文章中提取的,这些文章描述了使用GnEd技术用于农业目的的至少一种活体动物的生产。报道的最常见的GnEd系统是CRISPR/Cas9,并且最常见的编辑类型是由导致敲除(KO)突变的靶向DSB的修复导致的非引导插入或缺失。综述论文中包括的动物组是反刍动物(牛,绵羊,山羊,n=63);单一胃病(猪和兔,n=60);禽(鸡,鸭子,鹌鹑,n=17);水生(许多物种,n=65),和昆虫(蜜蜂,蚕,n=7)。收益率(32%),其次是繁殖(21%)和抗病性(17%)是最常见的目标性状。超过一半的审阅论文具有中国第一作者身份。几个国家,包括阿根廷,澳大利亚,巴西,哥伦比亚和日本,采取了一项监管政策,认为在GnEdDSB修复后引入的KO突变类似于自然遗传变异,因此,对这些GnEd动物的治疗类似于使用常规育种生产的动物。这种方法导致了对少量GnEd食用动物应用的非转基因测定,包括三种GnEdKO快速生长的鱼,(红鳗鱼,日本的橄榄比目鱼和虎河豚),阿根廷和巴西的KO鱼和牛,和哥伦比亚的猪繁殖与呼吸综合征(PRRS)病毒抗病KO猪。
    Gene editing (GnEd) involves using a site-directed nuclease to introduce a double-strand break (DSB) at a targeted location in the genome. A literature search was performed on the use of GnEd in animals for agricultural applications. Data was extracted from 212 peer-reviewed articles that described the production of at least one living animal employing GnEd technologies for agricultural purposes. The most common GnEd system reported was CRISPR/Cas9, and the most frequent type of edit was the unguided insertion or deletion resulting from the repair of the targeted DSB leading to a knock-out (KO) mutation. Animal groups included in the reviewed papers were ruminants (cattle, sheep, goats, n=63); monogastrics (pigs and rabbits, n=60); avian (chicken, duck, quail, n=17); aquatic (many species, n=65), and insects (honeybee, silkworm, n=7). Yield (32%), followed by reproduction (21%) and disease resistance (17%) were the most commonly targeted traits. Over half of the reviewed papers had Chinese first-authorship. Several countries, including Argentina, Australia, Brazil, Colombia and Japan, have adopted a regulatory policy that considers KO mutations introduced following GnEd DSB repair as akin to natural genetic variation, and therefore treat these GnEd animals analogously to those produced using conventional breeding. This approach has resulted in a non-GMO determination for a small number of GnEd food animal applications, including three species of GnEd KO fast-growing fish, (red sea bream, olive flounder and tiger pufferfish in Japan), KO fish and cattle in Argentina and Brazil, and porcine reproductive and respiratory syndrome (PRRS) virus disease-resistant KO pigs in Colombia.
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  • 文章类型: Journal Article
    间充质干细胞/基质细胞(MSCs)不仅能够自我更新,转分化,归巢到受损组织部位和通过分泌营养因子进行免疫调节,但也易于分离和扩增。因为这些特点,它们被用于许多细胞治疗的临床试验,包括免疫和神经疾病,糖尿病,骨和软骨疾病和心肌梗塞。然而,不是所有的试验都有成功的结果,由于不利的微环境因素和MSCs的异质性。因此,间充质干细胞的遗传操作可以增加其前景。目前,大多数研究集中在单一基因转染。即使引入一个以上的基因增加了复杂性,当触发不同的机制时,它也增加了有效性,导致协同效应。在这篇综述中,我们关注共转染的方法和效率,以及这些基因工程细胞用于治疗的机会和陷阱。
    Mesenchymal stem/stromal cells (MSCs) are not only capable of self-renewal, trans-differentiation, homing to damaged tissue sites and immunomodulation by secretion of trophic factors but are also easy to isolate and expand. Because of these characteristics, they are used in numerous clinical trials for cell therapy including immune and neurological disorders, diabetes, bone and cartilage diseases and myocardial infarction. However, not all trials have successful outcomes, due to unfavourable microenvironmental factors and the heterogenous nature of MSCs. Therefore, genetic manipulation of MSCs can increase their prospect. Currently, most studies focus on single transfection with one gene. Even though the introduction of more than one gene increases the complexity, it also increases the effectivity as different mechanism are triggered, leading to a synergistic effect. In this review we focus on the methodology and efficiency of co-transfection, as well as the opportunities and pitfalls of these genetically engineered cells for therapy.
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  • 文章类型: Journal Article
    将外源DNA转化为隐球菌是探索这些人类病原体基因功能的有力工具。根癌农杆菌介导的转化(AtMT)已被用于将外源DNA稳定引入隐球菌中二十多年,对于发现与真菌生物学有关的新基因的插入诱变筛选特别有影响力。本章提供了进行这种转换方法的详细协议。还介绍了修改的范围以及在隐球菌中使用AtMT的利弊。
    Transformation of foreign DNA into Cryptococcus species is a powerful tool for exploring gene functions in these human pathogens. Agrobacterium tumefaciens-mediated transformation (AtMT) has been used for the stable introduction of exogenous DNA into Cryptococcus for over two decades, being particularly impactful for insertional mutagenesis screens to discover new genes involved in fungal biology. A detailed protocol to conduct this transformation method is provided in the chapter. Scope for modifications and the benefits and disadvantages of using AtMT in Cryptococcus species are also presented.
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