关键词: A AA ALP ALT ASS ASS1 AST BWA Burrows Wheeler Aligner C CTLN CTLN1 CTLN2 E FAH FTTDCD G GC/MS GGT Glu HBV HCV HIV K Lys NGS NICCD Next generation sequencing Novel mutation PCR PLA PPA PSTI SLC25A13 SNP T Target sequence capture Type II citrullinaemia adenosine adult-onset type II citrullinaemia alanine transaminase alkaline phosphatase amino acid(s) argininosuccinate synthetase 1 aspartate aminotransferase base pair(s) bp citrullinaemia cytidine failure to thrive and dyslipidaemia caused by citrin deficiency gDNA gamma glutamyltransferase gas chromatography mass spectrometry gene encoding argininosuccinate synthase 1 gene encoding citrin gene encoding fumarylacetoacetate hydrolase genomic DNA glutamic acid guanosine hepatitis B virus hepatitis C virus human immunodeficiency virus lysine neonatal intrahepatic cholestatic hepatitis caused by citrin deficiency next-generation sequencing nt nucleotide(s) pancreatic secretory protease inhibitor phenylacetic acid phenylpyruvic acid polymerase chain reaction single-nucleotide polymorphism thymidine type I citrullinaemia

Mesh : Amino Acid Sequence Asians / genetics Base Sequence Calcium-Binding Proteins / deficiency Case-Control Studies Citrullinemia / genetics DNA Mutational Analysis / methods Female High-Throughput Nucleotide Sequencing / methods Humans Infant Mitochondrial Membrane Transport Proteins / genetics Molecular Sequence Data Mutation, Missense Organic Anion Transporters / deficiency

来  源:   DOI:10.1016/j.gene.2013.10.021

Abstract:
Type II citrullinaemia, also known as citrin deficiency, is an autosomal recessive metabolic disorder, which is caused by pathogenic mutations in the SLC25A13 gene on chromosome 7q21.3. One of the clinical manifestations of type II citrullinaemia is neonatal intrahepatic cholestatic hepatitis caused by citrin deficiency (NICCD, OMIM# 605814). In this study, a 5-month-old female Chinese neonate diagnosed with type II citrullinaemia was examined. The diagnosis was based on biochemical and clinical findings, including organic acid profiling using a gas chromatography mass spectrometry (GC/MS), and the patient\'s parents were unaffected. Approximately 14 kb of the exon sequences of the SLC25A13 and two relative genes (ASS1 and FAH) from the proband and 100 case-unrelated controls were captured by array-based capture method followed by high-throughput next-generation sequencing. Two single-nucleotide mutations were detected in the proband, including the previous reported c.1177+1G>A mutation and a novel c.754 G>A mutation in the SLC25A13 gene. Sanger sequence results showed that the patient was a compound heterozygote for the two mutations. The novel mutation (c.754 G>A), which is predicted to affect the normal structure and function of citrin, is a candidate pathogenic mutation. Target sequence capture combined with high-throughput next-generation sequencing technologies is proven to be an effective method for molecular genetic testing of type II citrullinaemia.
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