fed-batch fermentation

分批补料发酵
  • 文章类型: Journal Article
    为了利用纤维素酶的各种工业应用,包括它在食物中的使用,纸浆,纺织品,农业,和生物燃料部门,这项研究的重点是高产生产生物活性昆虫来源的内切葡聚糖酶,单香菜GH家族5(MsGHF5)。将MsGHF5导入乳酸克鲁维酵母基因组以维持表达稳定性,并使用补料分批发酵诱导酶的大量生产。培养40小时后,重组MsGHF5在培养液中成功生产,产量为29,000U/L,在半乳糖诱导。确定纯化的MsGHF5活性的最佳条件为pH为5,温度为35°C,亚铁离子的存在使酶活性提高了1.5倍。值得注意的是,在K.lactis中产生的MsGHF5的活性显着高于在大肠杆菌中产生的MsGHF5,表明糖基化对酶的功能性能至关重要。这项研究强调了K.lactis作为生产生物活性MsGHF5的宿主的潜在用途,从而为其在各个工业部门的应用铺平了道路。
    To harness the diverse industrial applications of cellulase, including its use in the food, pulp, textile, agriculture, and biofuel sectors, this study focused on the high-yield production of a bioactive insect-derived endoglucanase, Monochamus saltuarius GH Family 5 (MsGHF5). MsGHF5 was introduced into the genome of Kluyveromyces lactis to maintain expression stability, and mass production of the enzyme was induced using fed-batch fermentation. After 40 h of cultivation, recombinant MsGHF5 was successfully produced in the culture broth, with a yield of 29,000 U/L, upon galactose induction. The optimal conditions for the activity of purified MsGHF5 were determined to be a pH of 5 and a temperature of 35 °C, with the presence of ferrous ions enhancing the enzymatic activity by up to 1.5-fold. Notably, the activity of MsGHF5 produced in K. lactis was significantly higher than that produced in Escherichia coli, suggesting that glycosylation is crucial for the functional performance of the enzyme. This study highlights the potential use of K. lactis as a host for the production of bioactive MsGHF5, thus paving the way for its application in various industrial sectors.
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  • 文章类型: Journal Article
    木质纤维素是一种有价值的生物质,用于合成聚羟基丁酸酯(PHB)的可再生底物,一种生态友好的生物聚合物。在这项研究中,细菌菌株E5-3是从日本的土壤中分离出来的;通过16SrRNA基因测序将其鉴定为伯克霍尔德氏菌菌株E5-3。该菌株在37°C下显示出最佳生长,初始pH为9。它表现出不同的代谢能力,处理广泛的碳基材,包括木糖,葡萄糖,蔗糖,甘油,纤维二糖,and,特别是,棕榈油。棕榈油诱导最高的细胞生长,PHB含量为65重量%。该菌株对源自木质纤维素水解物的潜在发酵抑制剂表现出固有的耐受性,耐受3g/L5-羟甲基糠醛和1.25g/L乙酸。采用补料分批发酵策略与葡萄糖的组合,木糖,和纤维二糖导致PHB产量是传统分批发酵的2.7倍。油棕树干水解物的使用,没有抑制剂预处理,在补料分批发酵装置中导致显著的细胞生长,PHB含量为45%wt,相当于10g/L菌株E5-3产生的木糖衍生PHB的物理化学属性包括722kDa的分子量,数均分子量为191kDa,和3.78的多分散指数。该PHB的无定形结构显示出4.59°C的玻璃化转变温度,而其结晶对应物的熔点为171.03℃。这项研究突出了木质纤维素原料的潜力,尤其是油棕树干水解物,用于通过双歧杆菌菌株E5-3的补料分批发酵生产PHB,该菌株具有较高的抑制剂耐受性。
    Lignocellulosic biomass is a valuable, renewable substrate for the synthesis of polyhydroxybutyrate (PHB), an ecofriendly biopolymer. In this study, bacterial strain E5-3 was isolated from soil in Japan; it was identified as Burkholderia ambifaria strain E5-3 by 16 S rRNA gene sequencing. The strain showed optimal growth at 37 °C with an initial pH of 9. It demonstrated diverse metabolic ability, processing a broad range of carbon substrates, including xylose, glucose, sucrose, glycerol, cellobiose, and, notably, palm oil. Palm oil induced the highest cellular growth, with a PHB content of 65% wt. The strain exhibited inherent tolerance to potential fermentation inhibitors derived from lignocellulosic hydrolysate, withstanding 3 g/L 5-hydroxymethylfurfural and 1.25 g/L acetic acid. Employing a fed-batch fermentation strategy with a combination of glucose, xylose, and cellobiose resulted in PHB production 2.7-times that in traditional batch fermentation. The use of oil palm trunk hydrolysate, without inhibitor pretreatment, in a fed-batch fermentation setup led to significant cell growth with a PHB content of 45% wt, equivalent to 10 g/L. The physicochemical attributes of xylose-derived PHB produced by strain E5-3 included a molecular weight of 722 kDa, a number-average molecular weight of 191 kDa, and a polydispersity index of 3.78. The amorphous structure of this PHB displayed a glass transition temperature of 4.59 °C, while its crystalline counterpart had a melting point of 171.03 °C. This research highlights the potential of lignocellulosic feedstocks, especially oil palm trunk hydrolysate, for PHB production through fed-batch fermentation by B. ambifaria strain E5-3, which has high inhibitor tolerance.
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  • 文章类型: Journal Article
    通过添加水实现商业酵母发酵的生长模式的一致性,糖蜜和其他化学品由于其在操作中的生物化学反应而在性质上通常非常复杂。统计方法中的回归模型在对潜在机制进行建模中起着非常重要的作用,只要知道。相反,人工神经网络提供了一类广泛的通用,灵活的非线性架构来解释任何复杂的工业过程。在本文中,试图通过统计手段为时变酵母发酵过程找到一个鲁棒的控制系统,与非参数神经网络技术相比。在本文中使用的数据是从通过补料分批发酵工艺生产面包酵母的工业获得的。预测商业酵母生长模式的模型精度,当在使用的各种技术之间进行比较时,揭示了反向传播神经网络的最佳性能。通过投影寻踪回归使用的统计模型也显示出更高的预测精度。模特们,如此发展,还将有助于找到参数的最佳组合,以最大程度地减少酵母生产的变异性。
    Achieving consistency of growth pattern for commercial yeast fermentation over batches through addition of water, molasses and other chemicals is often very complex in nature due to its bio-chemical reactions in operation. Regression models in statistical methods play a very important role in modeling the underlying mechanism, provided it is known. On the contrary, artificial neural networks provide a wide class of general-purpose, flexible non-linear architectures to explain any complex industrial processes. In this paper, an attempt has been made to find a robust control system for a time varying yeast fermentation process through statistical means, and in comparison to non-parametric neural network techniques. The data used in this context are obtained from an industry producing baker\'s yeast through a fed-batch fermentation process. The model accuracy for predicting the growth pattern of commercial yeast, when compared among the various techniques used, reveals the best performance capability with the backpropagation neural network. The statistical model used through projection pursuit regression also shows higher prediction accuracy. The models, thus developed, would also help to find an optimum combination of parameters for minimizing the variability of yeast production.
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  • 文章类型: Journal Article
    藻蓝地林,一种藻类来源的采光色素,以其抗氧化特性而闻名,由于它在食品和药品行业中发挥着重要作用,并且由于其从自然资源中提取的低产量,需求激增。在这项研究中,工程谷氨酸棒杆菌是为了实现高PCB产量而开发的,并提出了三种策略:通过引入两种PCB相关酶来增强血红素生物合成途径,加强磷酸戊糖途径以产生NADPH的有效循环,和补料分批发酵,以最大限度地提高PCB产量。每种方法都增加了PCB合成,最终的工程菌株在烧瓶中成功产生78.19mg/L,在5L生物反应器中成功产生259.63mg/L,代表迄今为止报告的最高细菌产量的PCB,我们的知识。本研究中应用的策略将有助于PCB衍生物的合成,并可应用于食品和制药行业。
    Phycocyanobilin, an algae-originated light-harvesting pigment known for its antioxidant properties, has gained attention as it plays important roles in the food and medication industries and has surged in demand owing to its low-yield extraction from natural resources. In this study, engineered Corynebacterium glutamicum was developed to achieve high PCB production, and three strategies were proposed: reinforcement of the heme biosynthesis pathway with the introduction of two PCB-related enzymes, strengthening of the pentose phosphate pathway to generate an efficient cycle of NADPH, and fed-batch fermentation to maximize PCB production. Each approach increased PCB synthesis, and the final engineered strain successfully produced 78.19 mg/L in a flask and 259.63 mg/L in a 5 L bioreactor, representing the highest bacterial production of PCB reported to date, to our knowledge. The strategies applied in this study will be useful for the synthesis of PCB derivatives and can be applied in the food and pharmaceutical industries.
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  • 文章类型: Journal Article
    γ-氨基丁酸(GABA)是一种重要的神经递质,具有广阔的应用前景。在这项研究中,我们专注于从传统的中国发酵饮料系统中产生GABA的菌株。在六个分离株中,在传统的中国发酵饮料体系中,木耳乳杆菌GZ2表现出最大的产生GABA的能力。为了增加GABA产量,我们优化了碳源,氮源,温度,pH值,和味精和葡萄糖浓度,并进行补料分批发酵。GABA生产和细胞生长的最佳碳源和氮源是葡萄糖,酵母提取物和胰蛋白胨。随着葡萄糖和味精浓度从10g/L增加到50g/L,观察到GABA逐渐增加。在补料分批发酵过程中,用乳酸维持pH为5.56,用0.03g/mL葡萄糖和0.4g/mL味精饲喂72h,GABA产量达到239g/L这种新型的高产GABA菌株在GABA的工业化生产中具有巨大的潜力,以及促进健康的功能性食品和医疗领域的发展。
    γ-Aminobutyric acid (GABA) is a crucial neurotransmitter with wide application prospects. In this study, we focused on a GABA-producing strain from a traditional Chinese fermented beverage system. Among the six isolates, Lactobacillus hilgardii GZ2 exhibited the greatest ability to produce GABA in the traditional Chinese fermented beverage system. To increase GABA production, we optimized carbon sources, nitrogen sources, temperature, pH, and monosodium glutamate and glucose concentrations and conducted fed-batch fermentation. The best carbon and nitrogen sources for GABA production and cell growth were glucose, yeast extract and tryptone. Gradual increases in GABA were observed as the glucose and monosodium glutamate concentrations increased from 10 g/L to 50 g/L. During fed-batch fermentation, lactic acid was used to maintain the pH at 5.56, and after feeding with 0.03 g/mL glucose and 0.4 g/mL sodium glutamate for 72 h, the GABA yield reached 239 g/L. This novel high-GABA-producing strain holds great potential for the industrial production of GABA, as well as the development of health-promoting functional foods and medical fields.
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  • 文章类型: Journal Article
    1,3-二羟基丙酮(DHA)是一种重要的商业化学品,广泛用于化妆品中,制药,和食品工业,因为它可以防止水分过度蒸发,并提供抗紫外线保护和抗氧化活性。目前,DHA的工业生产基于使用氧化葡糖杆菌的生物技术合成路线。然而,实现更高的产量需要在合成过程中进行更多的改进。在这项研究中,我们比较了五种工业野生型葡糖杆菌菌株的DHA合成水平,之后,选择氧化银菌WSH-003菌株。然后,16个脱氢酶基因,与DHA合成无关,被单独击倒,一个菌株显着提高DHA的产量,达到89.49gL-1,比野生型菌株高42.27%。通过优化文化媒介,包括种子培养和发酵培养基,DHA产量进一步提高。最后,使用已建立的补料分批发酵系统,在5升生物反应器中,DHA产量达到198.81gL-1,甘油转化率为82.84%。
    1,3-Dihydroxyacetone (DHA) is a commercially important chemical and widely used in cosmetics, pharmaceuticals, and food industries as it prevents excessive water evaporation, and provides anti-ultraviolet radiation protection and antioxidant activity. Currently, the industrial production of DHA is based on a biotechnological synthetic route using Gluconobacter oxydans. However, achieving higher production requires more improvements in the synthetic process. In this study, we compared DHA synthesis levels in five industrial wild-type Gluconobacter strains, after which the G. oxydans WSH-003 strain was selected. Then, 16 dehydrogenase genes, unrelated to DHA synthesis, were individually knocked out, with one strain significantly enhancing DHA production, reaching 89.49 g L-1 and 42.27% higher than the wild-type strain. By optimizing the culture media, including seed culture and fermentation media, DHA production was further enhanced. Finally, using an established fed-batch fermentation system, DHA production reached 198.81 g L-1 in a 5 L bioreactor, with a glycerol conversion rate of 82.84%.
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  • 文章类型: Journal Article
    维生素B12是由微生物合成的复杂化合物。维生素B12的工业生产依赖于特定的微生物发酵过程。大肠杆菌已被用作从头生物合成维生素B12的宿主,掺入了大约30个异源基因。然而,复杂途径中的代谢失衡显著限制了维生素B12的产生。在这项研究中,我们采用多变量模块化代谢工程,通过操纵两个模块,在维生素B12生物合成途径中包含总共10个基因,来提高大肠杆菌中维生素B12的产量.这两个模块被整合到底盘细胞的染色体中,由T7、J23119和J23106启动子调控,实现组合途径优化。通过对由J23119和T7启动子控制的两个模块进行工程改造来获得最高的维生素B12滴度。在发酵培养基中掺入酵母粉可使维生素B12滴度提高至1.52mg/L。这种增强归因于酵母粉对提高氧转移速率和增强菌株的异丙基-β-d-1-硫代半乳糖苷(IPTG)耐受性的影响。最终,通过在5升发酵罐中放大发酵,维生素B12滴度达到2.89mg/L。本文报道的策略将加速利用大肠杆菌的工业规模维生素B12生产的发展。
    Vitamin B12 is a complex compound synthesized by microorganisms. The industrial production of vitamin B12 relies on specific microbial fermentation processes. E. coli has been utilized as a host for the de novo biosynthesis of vitamin B12, incorporating approximately 30 heterologous genes. However, a metabolic imbalance in the intricate pathway significantly limits vitamin B12 production. In this study, we employed multivariate modular metabolic engineering to enhance vitamin B12 production in E. coli by manipulating two modules comprising a total of 10 genes within the vitamin B12 biosynthetic pathway. These two modules were integrated into the chromosome of a chassis cell, regulated by T7, J23119, and J23106 promoters to achieve combinatorial pathway optimization. The highest vitamin B12 titer was attained by engineering the two modules controlled by J23119 and T7 promoters. The inclusion of yeast powder to the fermentation medium increased the vitamin B12 titer to 1.52 mg/L. This enhancement was attributed to the effect of yeast powder on elevating the oxygen transfer rate and augmenting the strain\'s isopropyl-β-d-1-thiogalactopyranoside (IPTG) tolerance. Ultimately, vitamin B12 titer of 2.89 mg/L was achieved through scaled-up fermentation in a 5-liter fermenter. The strategies reported herein will expedite the development of industry-scale vitamin B12 production utilizing E. coli.
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  • 文章类型: Journal Article
    虾青素,一种多功能的C40类胡萝卜素因其在食品中的应用而备受赞誉,化妆品,和健康,是一种具有强大抗氧化性能的鲜红色颜料。为了提高谷氨酸棒杆菌的虾青素产量,我们采用了合理的道路工程策略,专注于提高前体的可用性和优化末端氧官能化C40类胡萝卜素的生物合成。我们的努力导致虾青素前体的供应增加,而菌株BETA6(18mgg-1CDW)的β-胡萝卜素产量提高了1.5倍。通过微调β-胡萝卜素羟化酶基因crtZ和β-胡萝卜素酮酶基因crtW的表达,进一步促进了虾青素的生产。虾青素(菌株ASTA**)增加近五倍,虾青素占总类胡萝卜素的72%。ASTA**已成功转移到2L补料分批发酵中,滴度提高了103mgL-1虾青素,体积生产率为1.5mgL-1h-1。基于该菌株,在糖基转移酶基因crtX的异源表达下,实现了针对糖基化C40类胡萝卜素的途径扩展。据我们所知,这是第一次用谷氨酸棒杆菌生产虾青素-β-D-二葡萄糖苷,达到39mgL-1的高滴度的微生物C40葡萄糖苷。这项研究展示了途径工程解锁新的C40类胡萝卜素变体用于各种工业应用的潜力。
    Astaxanthin, a versatile C40 carotenoid prized for its applications in food, cosmetics, and health, is a bright red pigment with powerful antioxidant properties. To enhance astaxanthin production in Corynebacterium glutamicum, we employed rational pathway engineering strategies, focused on improving precursor availability and optimizing terminal oxy-functionalized C40 carotenoid biosynthesis. Our efforts resulted in an increased astaxanthin precursor supply with 1.5-fold higher β-carotene production with strain BETA6 (18 mg g-1 CDW). Further advancements in astaxanthin production were made by fine-tuning the expression of the β-carotene hydroxylase gene crtZ and β-carotene ketolase gene crtW, yielding a nearly fivefold increase in astaxanthin (strain ASTA**), with astaxanthin constituting 72% of total carotenoids. ASTA** was successfully transferred to a 2 L fed-batch fermentation with an enhanced titer of 103 mg L-1 astaxanthin with a volumetric productivity of 1.5 mg L-1 h-1. Based on this strain a pathway expansion was achieved towards glycosylated C40 carotenoids under heterologous expression of the glycosyltransferase gene crtX. To the best of our knowledge, this is the first time astaxanthin-β-D-diglucoside was produced with C. glutamicum achieving high titers of microbial C40 glucosides of 39 mg L-1. This study showcases the potential of pathway engineering to unlock novel C40 carotenoid variants for diverse industrial applications.
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  • 文章类型: English Abstract
    作为唯一含有元素硫的必需氨基酸,L-蛋氨酸在生物体内具有重要的生理生化功能。然而,发酵生产L-蛋氨酸的生产水平较低,已不能满足工业生产的要求。在本文中,系统优化了先前构建的高效L-蛋氨酸生产菌株大肠杆菌W3110ΔIJAHFEBCtrc-flytrc-malY/PAMglyA-22metF的发酵过程。基于最佳的初始葡萄糖浓度,不同补料分批发酵工艺的影响,包括DO-Stat,pH-Stat,控制不同水平的残余糖控制和恒定速率的葡萄糖喂养,对L-蛋氨酸发酵进行了研究。发现葡萄糖浓度的控制极大地影响了发酵过程。随后,开发了一种最佳的补料分批发酵工艺,其中L-蛋氨酸滴度增加到31.71g/L,迄今为止报道的最高产量,发酵时间缩短至68h。同时,建立了最佳补料分批发酵条件下的发酵动力学模型,这与L-蛋氨酸的生物合成过程非常吻合。这项研究可能有助于L-蛋氨酸发酵生产的进一步发展。
    As the only essential amino acid containing elemental sulphur, L-methionine has important physiological and biochemical functions in living organisms. However, the fermentative production of L-methionine has not met the requirements of industrial production because of its low production level. In this paper, the fermentation process of an efficient L-methionine producing strain E. coli W3110ΔIJAHFEBC trc-fliY trc-malY/PAM glyA-22 metF constructed previously was systematically optimized. Based on the optimal initial glucose concentration, the effects of different fed-batch fermentation processes, including DO-Stat, pH-Stat, controlling residual sugar control at different level and feeding glucose with constant rate, on L-methionine fermentation were studied. It was found that the control of glucose concentration greatly affected the fermentation process. Subsequently, an optimal fed-batch fermentation process was developed, where the L-methionine titer was increased to 31.71 g/L, the highest yield reported to date, while the fermentation time was shortened to 68 h. Meanwhile, a fermentation kinetics model under the optimal fed-batch fermentation conditions was established, which fitted well with the biosynthesis process of L-methionine. This study may facilitate further development of the fermentative production of L-methionine.
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  • 文章类型: Journal Article
    在这项研究中,我们提出了一种使用工程大肠杆菌在体内有效地从葡萄糖和尿嘧啶中产生假尿苷(Φ)的生物学方法。通过筛选宿主菌株和核心酶,E.coliMG1655过表达的单磷酸(ΦMP)糖苷酶和ΦMP磷酸酶被获得,这显示出最高的Φ浓度。然后,RBS序列的优化,增强细胞中的核糖5-磷酸供应,并研究了膜转运蛋白UraA的过表达。最后,在5L发酵罐中补料分批发酵,可以达到27.5g/L,在48小时内,尿嘧啶的产量为89.2mol%,葡萄糖的产量为25.6mol%,两者都是迄今为止最高的。此外,可以从结晶后的发酵液中纯化出纯度为99.8%的产品。这项工作提供了一种有效且环保的协议,可以在工业规模上进行生物生产。
    In this study, we proposed a biological approach to efficiently produce pseudouridine (Ψ) from glucose and uracil in vivo using engineered Escherichia coli. By screening host strains and core enzymes, E. coli MG1655 overexpressing Ψ monophosphate (ΨMP) glycosidase and ΨMP phosphatase was obtained, which displayed the highest Ψ concentration. Then, optimization of the RBS sequences, enhancement of ribose 5-phosphate supply in the cells, and overexpression of the membrane transport protein UraA were investigated. Finally, fed-batch fermentation of Ψ in a 5 L fermentor can reach 27.5 g/L with a yield of 89.2 mol % toward uracil and 25.6 mol % toward glucose within 48 h, both of which are the highest to date. In addition, the Ψ product with a high purity of 99.8% can be purified from the fermentation broth after crystallization. This work provides an efficient and environmentally friendly protocol for allowing for the possibility of Ψ bioproduction on an industrial scale.
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