Taxonomy

分类法
  • 文章类型: Journal Article
    一种新型兼性厌氧和革兰氏染色阴性细菌,指定FJH33T,从漳州红树林沉积物中分离出来,公关中国。菌株FJH33T的细胞呈杆状或略微弯曲,宽度为0.3-0.5µm,长度为1.0-3.0µm。菌株FJH33T的最佳生长发生在3%NaCl(w/v)的存在下,在33°C和pH7.0下。氧化酶活性为阴性,而过氧化氢酶活性为阳性。确定了其铁还原能力。基于16SrRNA基因序列相似性,菌株FJH33T与黄牛XSD2T最密切相关(95.1%),其次是SediminisY2-1-60T(95.0%)和Maribellusmaritimus5E3T(94.9%)。菌株FJH33T和黄牛XSD2T的基因组分析显示低基因组相关性,平均核苷酸同一性值为73.8%,数字DNA-DNA杂交值为19.0%。由16SrRNA基因和基因组序列构建的系统发育树表明,菌株FJH33T代表了Maribellus属中相对独立的系统发育谱系。主要的细胞脂肪酸(≥10%)是异C15:0和C18:1ω9c。唯一的呼吸醌是MK-7。极性脂质由磷脂酰乙醇胺组成,二磷脂酰胆碱,二磷脂酰甘油和一种未鉴定的脂质。DNAG+C含量为41.4mol%。根据系统发育的综合结果,生理,生化和化学分类学特征,我们认为菌株FJH33T代表了Maribellus属的一种新物种,名字为Maribellusmangrovisp。11月。是提议的。菌株类型为FJH33T(=KCTC102210T=MCCC1H01459T)。
    A novel facultatively anaerobic and Gram-stain-negative bacterium, designated FJH33T, was isolated from mangrove sediment sampled in Zhangzhou, PR China. Cells of strain FJH33T were rod-shaped or slightly curved-shaped, with widths of 0.3-0.5 µm and lengths of 1.0-3.0 µm. Optimum growth of strain FJH33T occurred in the presence of 3 % NaCl (w/v), at 33 °C and at pH 7.0. Oxidase activity was negative, while catalase activity was positive. Its iron-reducing ability was determined. Based on 16S rRNA gene sequence similarity, strain FJH33T was most closely related to Maribellus luteus XSD2T (95.1 %), followed by Maribellus sediminis Y2-1-60T (95.0 %) and Maribellus maritimus 5E3T (94.9 %). Genome analysis of strains FJH33T and M. luteus XSD2T revealed low genome relatedness, with an average nucleotide identity value of 73.8% and a digital DNA-DNA hybridization value of 19.0%. Phylogenetic trees built from 16S rRNA genes and genome sequences showed that strain FJH33T represents a relatively independent phylogenetic lineage within the genus Maribellus. The major cellular fatty acids (≥10 %) were iso-C15 : 0 and C18 : 1  ω9c. The sole respiratory quinone was MK-7. The polar lipids consisted of phosphatidylethanolamine, diphosphatidylcholine, diphosphatidyglycerol and one unidentified lipid. The DNA G+C content was 41.4 mol%. Based on the integrated results of phylogenetic, physiological, biochemical and chemotaxonomic characterizations, we propose that strain FJH33T represents a novel species of the genus Maribellus, for which the name Maribellus mangrovi sp. nov. is proposed. The type strain is FJH33T (=KCTC 102210T=MCCC 1H01459T).
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  • 文章类型: Journal Article
    描述了Homoneura亚属的七个新种,Homoneura(Homoneura)陈&李,sp.11月。,Homoneura(Homoneura)dilatataChen&Li,sp.11月。,homoneura(homoneura)jiangjinensisChen&Li,sp.11月。,Homoneura(Homoneura)微特里卡·陈&李,sp.11月。,Homoneura(Homoneura)multisetaChen&Li,sp.11月。,Homoneura(Homoneura)serrulataChen&Li,sp.11月。,Homoneura(Homoneura)simianshanaChen&Li,sp.11月。,是从江津区收集的,重庆西南部,中国并被分配到河南组。介绍了中国该物种组中所有53种的关键。
    Seven new species of the subgenus Homoneura are described, Homoneura (Homoneura) biconica Chen & Li, sp. nov., Homoneura (Homoneura) dilatata Chen & Li, sp. nov., Homoneura (Homoneura) jiangjinensis Chen & Li, sp. nov., Homoneura (Homoneura) microtricha Chen & Li, sp. nov., Homoneura (Homoneura) multiseta Chen & Li, sp. nov., Homoneura (Homoneura) serrulata Chen & Li, sp. nov., Homoneura (Homoneura) simianshana Chen & Li, sp. nov., which were collected from Jiangjin District, southwestern Chongqing, China and are assigned to the henanensis group. A key to all of the 53 species of this species group in China is presented.
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  • 文章类型: Journal Article
    提出了使用形态和分子特征(COI)对韩国曼陀罗进行的分类学研究。八个物种[Amantisnawai(Shiraki,1908),猕猴桃Westwood,1889年,MantisreligiosasinicaBazyluk,1960年,Statiliamaculata(Thunberg,1784),TenoderaangustipennisSaussure,1869年,T.sinensisSaussure,1871年,霍尔纳,1929年,H.patellifera(Audinet-Serville,1838)]属于三个科中的六个属。使用未校正的p距离的COI的种间遗传差异范围为6.7%至22.4%,而8种韩国曼多迪亚物种的种内差异从0%到2.2%不等。所有八个物种都在邻居连接树和简约树上使用COI作为单一谱系得到了强有力的支持。一把插图钥匙,重新描述,habitus照片,并提供了韩国曼多迪亚物种诊断特征的插图,以方便识别。
    A taxonomic study of Korean Mantodea using morphological and molecular characters (COI) is presented. Eight species [Amantisnawai (Shiraki, 1908), Acromantisjaponica Westwood, 1889, Mantisreligiosasinica Bazyluk, 1960, Statiliamaculata (Thunberg, 1784), Tenoderaangustipennis Saussure, 1869, T.sinensis Saussure, 1871, Hierodulachinensis Werner, 1929, H.patellifera (Audinet-Serville, 1838)] belonging to six genera in three families are recognized. Interspecific genetic divergence of COI using uncorrected p-distance ranged from 6.7% to 22.4%, while intraspecific divergence ranged from 0% to 2.2% among eight Korean Mantodea species. All eight species were each strongly supported as a single lineage using COI on both neighbor-joining and parsimony trees. An illustrated key, redescriptions, habitus photographs, and illustrations of diagnostic characters of the species of Korean Mantodea are provided to facilitate identification.
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  • 文章类型: Journal Article
    Microdochiaceae(Xylariales,梭菌)已从世界各地报道,并从不同的植物宿主中收集。拟议的新属和两个新种,viz.,Macroidriellagen。11月。,M.bambusaesp.11月。和Microdochiumaustralesp.11月。,基于ITSrDNA组合数据集中的多基因座系统发育,LSU,RPB2和TUB2具有形态特征。Microdochiumsinense是从芦苇的病叶中收集的,这是该真菌在该寄主植物上的首次报道。同时,我们注释了10372到1863个基因,鉴定出4,909个单拷贝直系同源基因,并根据基因组数据进行了系统发育分析。进行了基因家族分析,它将扩大对Microdochiaceae进化史和生物多样性的理解。提供了物种的详细描述和插图。
    Species of the family Microdochiaceae (Xylariales, Sordariomycetes) have been reported from worldwide, and collected from different plant hosts. The proposed new genus and two new species, viz., Macroidriella gen. nov., M.bambusae sp. nov. and Microdochiumaustrale sp. nov., are based on multi-locus phylogenies from a combined dataset of ITS rDNA, LSU, RPB2 and TUB2 with morphological characteristics. Microdochiumsinense has been collected from diseased leaves of Phragmitesaustralis and this is the first report of the fungus on this host plant. Simultaneously, we annotated 10,372 to 11,863 genes, identified 4,909 single-copy orthologous genes, and conducted phylogenomic analysis based on genomic data. A gene family analysis was performed and it will expand the understanding of the evolutionary history and biodiversity of the Microdochiaceae. The detailed descriptions and illustrations of species are provided.
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  • 文章类型: Journal Article
    Amphichorda先前已被接受为Cordycipitaceae的成员,目前被认为是Bionectriaceae的成员。Amphichorda的底物复杂多变,主要是动物粪便。本研究报告了来自中国西南部云南省的两个新物种。基于五基因(nrSSU,nrLSU,tef-1α,rpb1和rpb2)序列和ITS数据系统发育分析,两个新物种,即排泄物A和昆明斯A,提出了新物种的详细描述。从公园的动物粪便中分离出Amphichordaexicmenta和A.kunmingensis。还比较了Amphichorda中两个新物种和七个已知物种的形态特征。
    Amphichorda has been previously accepted as a member of the Cordycipitaceae and currently it is considered a member of the Bionectriaceae. The substrates of Amphichorda were complex and varied, being mainly animal faeces. This study reports two new species of Amphichorda from Yunnan Province in south-western China. Based on the five-gene (nrSSU, nrLSU, tef-1α, rpb1 and rpb2) sequence and ITS data phylogenetic analysis, two new species, namely A.excrementa and A.kunmingensis, are proposed and a detailed description of the new species is provided. Amphichordaexcrementa and A.kunmingensis were isolated from animal faeces in the park. The morphological characteristics of two novel species and seven known species in Amphichorda are also compared.
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  • 文章类型: Journal Article
    海洋prasinophyte绿藻Pyccoccusprovasolii和Pseudoscrafieldiamarina代表了Pycnococcaceae的唯一现存的属和已知的物种。然而,它们的分类地位需要重新评估,由于从先前的单个基因的序列比较中推断出非常密切的关系。虽然Py。provasolii和Ps。Marina在形态上不同,它们的质体rbcL和核小亚基rRNA基因在序列上几乎或完全相同,因此导致了这样的假设,即它们代表了同一生物体的不同生长形式或交替的生命周期阶段。为了评估这个假设,我们用细胞器基因组作为分子标记.PS的质体和有丝分裂体。对MarinaUIO007进行了测序,并与两个Py分离株的可用序列进行了比较。provasolii(CCMP1203和CCAP190/2)。的Ps。码头细胞器基因组被证明在大小上几乎相同,并且与它们的Py具有相同的基因含量和基因顺序。provasolii对应的。使用基因组规模序列比对定位单核苷酸取代和插入/缺失。在质体和有丝分裂基因组的所有成对比较中观察到超过99.70%的序列同一性。两个细胞器基因组的比对显示Ps。MarinaUIO007更靠近Py。CCAP原虫190/2比两个Py。provasolii菌株彼此。因此,我们的结果与Ps的放置不一致。Marina和Py.前维氏菌株分为不同的属。我们建议对Pyccocycaceae进行分类学修订,并建立了一类新的叶绿素,假天灾植物科。
    The marine prasinophyte green algae Pycnococcus provasolii and Pseudoscourfieldia marina represent the only extant genera and known species of the Pycnococcaceae. However, their taxonomic status needs to be reassessed, owing to the very close relationship inferred from previous sequence comparisons of individual genes. Although Py. provasolii and Ps. marina are morphologically different, their plastid rbcL and nuclear small subunit rRNA genes were observed to be nearly or entirely identical in sequence, thus leading to the hypothesis that they represent distinct growth forms or alternate life-cycle stages of the same organism. To evaluate this hypothesis, we used organelle genomes as molecular markers. The plastome and mitogenome of Ps. marina UIO 007 were sequenced and compared with those available for two isolates of Py. provasolii (CCMP 1203 and CCAP 190/2). The Ps. marina organelle genomes proved to be almost identical in size and had the same gene content and gene order as their Py. provasolii counterparts. Single nucleotide substitutions and insertions/deletions were localized using genome-scale sequence alignments. Over 99.70% sequence identities were observed in all pairwise comparisons of plastomes and mitogenomes. Alignments of both organelle genomes revealed that Ps. marina UIO 007 is closer to Py. provasolii CCAP 190/2 than are the two Py. provasolii strains to one another. Therefore, our results are not consistent with the placement of Ps. marina and Py. provasolii strains into distinct genera. We propose a taxonomic revision of the Pycnococcaceae and the erection of a new class of Chlorophyta, the Pseudoscourfieldiophyceae.
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  • 文章类型: Journal Article
    全球,草本保存着代表全球植物多样性的参考标本。这些藏品是各种学科基础植物学研究和应用科学研究的宝贵资源,并在解决生物多样性保护等重大社会挑战方面发挥重要作用。植物标本室标本的数字化及其在线传播是这些馆藏策展中最重要的最新进展之一。数字化显着增强了研究界对馆藏的访问,并促进了对生物多样性数据的大规模分析。数字化还提供了一种保存物理标本的方法,因为它减少了处理和运输的需要。快速的技术发展大大加快了数据库化和馆藏数字成像的速度。MeiseBotanicGarden最近完成了一项为期六年的项目,将其植物标本室收集的约300万件标本安装在床单上,通过这一过程,我们学到了宝贵的经验教训。我们在10项建议中积累了我们的经验,供其他收藏机构在开始计划自己的数字化工作时从中汲取灵感。我们还提出了案例研究,我们深入研究某些主题作为例子。
    Worldwide, herbaria maintain collections of reference specimens representing global plant diversity. These collections are a valuable resource for fundamental botanical research and applied scientific research across various disciplines, and play a significant role in addressing major societal challenges such as biodiversity conservation. The digitisation of herbarium specimens and their online dissemination is one of the most important recent developments in the curation of these collections. Digitisation significantly enhances access to the collections for the research community and facilitates large-scale analysis of biodiversity data. Digitisation also provides a means for preserving the physical specimens, as it reduces the need for handling and transportation. Rapid technological developments have greatly accelerated the rate of databasing and digital imaging of collections. Meise Botanic Garden recently completed a six-year project to mass digitise its herbarium collections of about 3 million specimens mounted on sheets and through this process we have learned valuable lessons. We have captured our experience in 10 recommendations for other collection-holding institutions to take inspiration from as they start planning their own digitisation efforts. We also present case studies where we delve deeper into certain topics as examples.
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  • 文章类型: Journal Article
    最近在苏门答腊进行的野外工作导致了显眼的姜属Geocharis的不寻常收藏,一个在苏门答腊共有6个物种的属,马来半岛,婆罗洲和菲律宾。在仔细审查了现有分类群的类型和特征之后,我们得出的结论是,最近的藏品代表了一个新物种,这里描述为Geocharisglobosa,类似于G.aurantiaca,G.rubra和G.radicalis的花朵在各个方向上均匀传播,但与之不同的是,较少分裂的唇瓣和非结构化和光滑的球形果实。我们提供了新物种的详细说明和照相板以及初步的红色清单评估。随着新物种添加到Geocharismacrostemon和radicalis中,因此,苏门答腊的物种数量增加到三个。提供了属的重新界定,考虑到新物种不寻常的果实特征。
    Recent fieldwork conducted in Sumatra resulted in unusual collections of the conspicuous ginger genus Geocharis, a genus that harbours a total of six species distributed in Sumatra, the Malay Peninsula, Borneo and the Philippines. After carefully reviewing types and protologues of existing taxa, we conclude that the recent collections represent a new species described here as Geocharisglobosa, which is similar to G.aurantiaca, G.rubra and G.radicalis by the flowers spreading evenly in all directions but differs from these by the less divided labellum and by the unstructured and smooth globose fruits. We provide a detailed description and a photographic plate as well as a preliminary Red List Assessment for the new species. With the new species added to Geocharismacrostemon and G.radicalis, the number of species in Sumatra hereby increases to three. A recircumscription of the genus is provided, taking into account the unusual fruit character of the new species.
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  • 文章类型: Journal Article
    伊拉克是中东地区的一个大国,与土耳其和伊朗接壤,已知拥有全球最大的两种蜜蜂动物的国家,正如预期的那样,一组有利于干燥到地中海气候的昆虫。尽管区域物种丰富,伊拉克的蜜蜂动物群长期被研究不足,鲜为人知,无论是相对还是绝对。对于高度特殊的蜜蜂属安德瑞娜来说是这样,伊拉克以前只有17种。这项工作是对伊拉克安德雷纳动物区系修订的第一个现代贡献。根据2023年在Duhok省(伊拉克库尔德斯坦)的新标本收集,提出了伊拉克的59种安德雷纳物种(首次记录了42种)的修订后总数,包括两个新物种的描述:Andrena(Aciandrena)duhokensisWood,sp.11月。和Andrena(Notandrena)baiocchiiWood,sp.11月。A.(Micrandrena)elamWood的未知雄性,2022年,A.(Micrandrena)obsidianaWood,2022年和A.(诺特雷纳)艾娜·伍德,2023年被描述。AndrenabakrajoensisAmin&Mawlood,2019年,syn。11月。与A.(Holandrena)variabilisSmith同义,1853.其他记录来自附近的中东国家,尤其是黎巴嫩。这些结果突显了伊拉克安德雷纳动物区系的根本研究不足。
    Iraq is a large country in the Middle East region that borders both Turkey and Iran, countries known to host two of the largest bee faunas globally, as expected for a group of insects that favour dry to Mediterranean climates. Despite this huge regional species richness, the bee fauna of Iraq is chronically understudied and poorly known, both in relative and absolute terms. This is true for the hyper-speciose bee genus Andrena, for which only 17 species have been previously published for Iraq. This work is the first modern contribution to the revision of the Andrena fauna of Iraq. Based on new specimen collections in Duhok Governorate (Iraqi Kurdistan) during 2023, a revised total of 59 Andrena species for Iraq (42 species recorded for the first time) is presented, including the description of two new species: Andrena (Aciandrena) duhokensis Wood, sp. nov. and Andrena (Notandrena) baiocchii Wood, sp. nov. The unknown males of A. (Micrandrena) elam Wood, 2022, A. (Micrandrena) obsidiana Wood, 2022, and A. (Notandrena) ayna Wood, 2023 are described. Andrenabakrajoensis Amin & Mawlood, 2019, syn. nov. is synonymised with A. (Holandrena) variabilis Smith, 1853. Additional records are presented from nearby Middle Eastern countries, particularly Lebanon. These results highlight the fundamentally understudied nature of the Iraqi Andrena fauna.
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  • 文章类型: Journal Article
    BannanaTong和Li属的一个新种,2015年和TrilacunaTong和Li属的新种,2007是从西双版纳录制的,云南省:BannanazhengguoiTong&Li,sp.11月。(‰‰)和TrilacunaoxianTong&Li,sp.11月。(‰‰)。提供了来自西双版纳的Bannana属物种的鉴定密钥。详细的诊断,描述,提供了新物种的显微照片。
    A new species of the genus Bannana Tong & Li, 2015 and a new species of the genus Trilacuna Tong & Li, 2007 are recorded from Xishuangbanna, Yunnan Province: Bannanazhengguoi Tong & Li, sp. nov. (♂♀) and Trilacunaaoxian Tong & Li, sp. nov. (♂♀). An identification key to species of the genus Bannana from Xishuangbanna is provided. Detailed diagnoses, descriptions, and photomicroscopy images of new species are provided.
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