Taxonomy

分类法
  • 文章类型: Journal Article
    非酒精性脂肪性肝病(NAFLD),或代谢功能障碍相关的脂肪变性肝病(MASLD),是一种与超重有关的肝脏疾病,肥胖,糖尿病,和代谢综合征。非酒精性脂肪性肝炎(NASH),或代谢功能障碍相关脂肪性肝炎(MASH),是NAFLD/MASLD的一种形式,随着时间的推移而发展。虽然脂肪变性是一个突出的组织学特征,并且在显微镜下可以大致识别,NASH/MASH患者的肝活检可能表现出其他几种异常,例如门静脉和小叶区域的单核炎症,以膨胀和程序性细胞死亡(凋亡)为特征的肝细胞损伤,错误折叠的肝细胞蛋白内含物(Mallory-Denk体,MDB),巨型线粒体作为透明内含物,和纤维化。球囊性肝细胞损伤仍然是NASH/MASH的定义特征。纤维化模式的特征是窦周纤维化(“鸡丝”)和中央静脉周围纤维化的初始表达。儿童可能患有以脂肪变性为特征的进行性NAFLD/MASLD的替代形式,炎症,和纤维化,主要在肝腺泡的Rappaport1区。为了识别,合成,并分析在综合叙述回顾中使用评分评估NAFLD/MASLD的含义所产生的科学知识。文章的搜索是在2000年1月1日至2023年12月31日期间在PubMed/MEDLINE上进行的,Scopus,WebofScience,和Cochrane数据库。这个搜索得到了灰色搜索的补充,包括互联网浏览器(例如,谷歌)和教科书。以下研究问题指导了该研究:“使用评分评估NAFLD/MASLD的基本数据是什么?”选择过程的所有阶段均由作者进行。在发现的1783篇文章中,75个样本被包括在分析中,这是通过参考文献和灰色文献中的另外25篇文章实施的。分析的研究表明对肝活检进行评分的有益效果。尽管酒精性脂肪性肝炎(ASH)和NASH/MASH之间存在相似性,在肝脏酒精性疾病中看到的某些肝细胞损伤模式在NASH/MASH中不会发生,包括以脂肪性肝炎为特征的胆汁淤积,酒精性泡沫变性,和硬化性以透明坏死为主.一般来说,富含中性粒细胞的细胞浸润,突出的透明夹杂物和MDB,胆汁淤积,与NASH/MASH相比,明显的细胞周围纤维化应更有利于酒精引起的肝细胞损伤的诊断。多种分级和分期方法可在调查和临床试验中实施,每个都有优点和缺点。主要使用的系统是Brunt,NASHCRN(NASH临床研究网络),和SAF(脂肪变性,活动,和纤维化)系统。临床研究已经利用几种方法将实验室和人口统计学观察与组织学发现与快速商业化药物临床试验的最佳平台联系起来。机器学习程序(人工智能)对于开发新平台以评估当前和未来药物配方的益处至关重要。
    Nonalcoholic fatty liver disease (NAFLD), or metabolic dysfunction-associated steatotic liver disease (MASLD), is a liver condition that is linked to overweight, obesity, diabetes mellitus, and metabolic syndrome. Nonalcoholic steatohepatitis (NASH), or metabolic dysfunction-associated steatohepatitis (MASH), is a form of NAFLD/MASLD that progresses over time. While steatosis is a prominent histological characteristic and recognizable grossly and microscopically, liver biopsies of individuals with NASH/MASH may exhibit several other abnormalities, such as mononuclear inflammation in the portal and lobular regions, hepatocellular damage characterized by ballooning and programmed cell death (apoptosis), misfolded hepatocytic protein inclusions (Mallory-Denk bodies, MDBs), megamitochondria as hyaline inclusions, and fibrosis. Ballooning hepatocellular damage remains the defining feature of NASH/MASH. The fibrosis pattern is characterized by the initial expression of perisinusoidal fibrosis (\"chicken wire\") and fibrosis surrounding the central veins. Children may have an alternative form of progressive NAFLD/MASLD characterized by steatosis, inflammation, and fibrosis, mainly in Rappaport zone 1 of the liver acinus. To identify, synthesize, and analyze the scientific knowledge produced regarding the implications of using a score for evaluating NAFLD/MASLD in a comprehensive narrative review. The search for articles was conducted between 1 January 2000 and 31 December 2023, on the PubMed/MEDLINE, Scopus, Web of Science, and Cochrane databases. This search was complemented by a gray search, including internet browsers (e.g., Google) and textbooks. The following research question guided the study: \"What are the basic data on using a score for evaluating NAFLD/MASLD?\" All stages of the selection process were carried out by the single author. Of the 1783 articles found, 75 were included in the sample for analysis, which was implemented with an additional 25 articles from references and gray literature. The studies analyzed indicated the beneficial effects of scoring liver biopsies. Although similarity between alcoholic steatohepatitis (ASH) and NASH/MASH occurs, some patterns of hepatocellular damage seen in alcoholic disease of the liver do not happen in NASH/MASH, including cholestatic featuring steatohepatitis, alcoholic foamy degeneration, and sclerosing predominant hyaline necrosis. Generally, neutrophilic-rich cellular infiltrates, prominent hyaline inclusions and MDBs, cholestasis, and obvious pericellular sinusoidal fibrosis should favor the diagnosis of alcohol-induced hepatocellular injury over NASH/MASH. Multiple grading and staging methods are available for implementation in investigations and clinical trials, each possessing merits and drawbacks. The systems primarily used are the Brunt, the NASH CRN (NASH Clinical Research Network), and the SAF (steatosis, activity, and fibrosis) systems. Clinical investigations have utilized several approaches to link laboratory and demographic observations with histology findings with optimal platforms for clinical trials of rapidly commercialized drugs. It is promising that machine learning procedures (artificial intelligence) may be critical for developing new platforms to evaluate the benefits of current and future drug formulations.
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  • 文章类型: Journal Article
    目的:系统回顾对轻度认知障碍或痴呆患者进行自然干预的研究,并报告作者如何通过介绍基于自然的干预措施的分类法来定义他们的干预措施。
    方法:对2008年至2024年间发表的研究进行了概念性系统综述,调查了对轻度认知障碍或痴呆症患者的基于自然的干预措施。三名审稿人独立做出了贡献。排除标准:不具体说明参与者是否有轻度认知障碍或痴呆,只招募看护人,没有主数据,研究协议,摘要,reviews,不是同行评审的期刊文章和任何其他灰色文献。对论文中的干预描述进行了主题分析。
    结果:纳入52篇报告51项研究的文章。最常见的干预措施是自然虚拟现实(VR技术)和园艺。从定义数据中,我们制作了一个分类法,其总体领域为:(a)使用的其他术语;(b)特征;(c)活动。子域包括:开发或方法,行动模式,location,物理特征,和活动。一些干预措施可以分组。干预措施的结构和标准化各不相同,缺乏明确的报道。
    结论:该分类法提供了基于自然的干预措施的概念化,未来的研究人员可以使用这些干预措施来指导开发。对这一领域强有力的干预措施进行评估和报告。
    OBJECTIVE: To systematically review research testing nature-based interventions for people living with mild cognitive impairment or dementia, and to report how authors have defined their interventions by presenting a taxonomy of the nature-based interventions.
    METHODS: A conceptual systematic review of research published between 2008 and 2024 investigating nature-based interventions for people living with mild cognitive impairment or dementia was conducted. Three reviewers contributed independently. Exclusion criteria: not specifying if participants had mild cognitive impairment or dementia, only recruiting caregivers, no primary data, study protocols, abstracts, reviews, not peer-reviewed journal articles and any other grey literature. Intervention descriptions within the papers were thematically analysed.
    RESULTS: Fifty-two articles reporting fifty-one studies were included. The most common interventions were nature virtual reality (VR technology) and gardening. From the definition data, we produced a taxonomy with overarching domains of: (a) Other terms used; (b) Characteristics; (c) Activities. Subdomains included: development or approach, modes of action, location, physical features, and activities. Some interventions could be grouped. Structure and standardisation of the interventions varied, with a lack of clear reporting.
    CONCLUSIONS: This taxonomy provides conceptualisations of nature-based interventions that can be used by future researchers to guide the development, evaluation and reporting of robust interventions in this area.
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  • 文章类型: Journal Article
    提出了使用形态和分子特征(COI)对韩国曼陀罗进行的分类学研究。八个物种[Amantisnawai(Shiraki,1908),猕猴桃Westwood,1889年,MantisreligiosasinicaBazyluk,1960年,Statiliamaculata(Thunberg,1784),TenoderaangustipennisSaussure,1869年,T.sinensisSaussure,1871年,霍尔纳,1929年,H.patellifera(Audinet-Serville,1838)]属于三个科中的六个属。使用未校正的p距离的COI的种间遗传差异范围为6.7%至22.4%,而8种韩国曼多迪亚物种的种内差异从0%到2.2%不等。所有八个物种都在邻居连接树和简约树上使用COI作为单一谱系得到了强有力的支持。一把插图钥匙,重新描述,habitus照片,并提供了韩国曼多迪亚物种诊断特征的插图,以方便识别。
    A taxonomic study of Korean Mantodea using morphological and molecular characters (COI) is presented. Eight species [Amantisnawai (Shiraki, 1908), Acromantisjaponica Westwood, 1889, Mantisreligiosasinica Bazyluk, 1960, Statiliamaculata (Thunberg, 1784), Tenoderaangustipennis Saussure, 1869, T.sinensis Saussure, 1871, Hierodulachinensis Werner, 1929, H.patellifera (Audinet-Serville, 1838)] belonging to six genera in three families are recognized. Interspecific genetic divergence of COI using uncorrected p-distance ranged from 6.7% to 22.4%, while intraspecific divergence ranged from 0% to 2.2% among eight Korean Mantodea species. All eight species were each strongly supported as a single lineage using COI on both neighbor-joining and parsimony trees. An illustrated key, redescriptions, habitus photographs, and illustrations of diagnostic characters of the species of Korean Mantodea are provided to facilitate identification.
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  • 文章类型: Journal Article
    ToxorhinaLoew属的七个物种,1850年被记录在中国,其中已知有三种发生在云南省。在这里,所有已知的物种都来自云南,对中国进行了更详细的描述和说明。弓形虫的一种,属于CeratocheilusWesché亚属,1910年来自云南,T.(C.)皮安米卡。11月。,被描述和说明为新的科学。
    Seven species of the genus Toxorhina Loew, 1850 have been recorded from China, of which three are known to occur in Yunnan Province. Herein, all known species from Yunnan, China are reviewed with more detailed descriptions and illustrations of the male hypopygium. A species of Toxorhina belonging to the subgenus Ceratocheilus Wesché, 1910 from Yunnan, T. (C.) pianmicasp. nov., is described and illustrated as new to science.
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  • 文章类型: Journal Article
    KarschiaWalter属的物种,1889年,从西藏收集,中国,被审查了。利用形态学和分子数据共识别出6个物种,卡尔希亚(Karschia)西藏赫斯特,1907年是根据新收集的雄性和雌性重新描述的,和五个新物种,Karschia(Karschia)dingyesp.11月。,卡尔希亚(卡尔希亚)拉萨普。11月。,Karschia(Karschia)zhuisp.11月。,卡尔希亚(Karschia)shigatsesp。11月。,和Karschia(Karschia)namlingsp。11月。,被描述。
    The species of the genus Karschia Walter, 1889, collected from Xizang, China, were reviewed. A total of six species were recognized using morphological and molecular data, Karschia (Karschia) tibetana Hirst, 1907 is redescribed based on newly collected males and females, and five new species, Karschia (Karschia) dingyesp. nov., Karschia (Karschia) lhasasp. nov., Karschia (Karschia) zhuisp. nov., Karschia (Karschia) shigatsesp. nov., and Karschia (Karschia) namlingsp. nov., are described.
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  • 文章类型: Journal Article
    在本文中,VitreaFitzinger属,1833年在塞尔维亚被审查。总结了来自塞尔维亚的该属的所有先前文献数据,并用于讨论其在该国的分布并创建分布图,补充作者收集的新材料。所有塞尔维亚物种都被认为。对于每个物种,检查标本的简要描述,关于塞尔维亚以前发现的数据,被分析的材料(包括类型),他们在塞尔维亚的分布和栖息地,以及对特定物种的评论。一个新物种,VitreavirgoGojšina&Dedov,sp.11月。,是从Mt上的一个坑描述的。塞尔维亚东部的Devica。Vitreapygmaea(O.Boettger,1880)是塞尔维亚领土上的第一次报道。由于某些Vitrea物种的地理范围狭窄,并且更喜欢某些栖息地,它们特别容易受到栖息地变化的影响,这也在本文中进行了讨论。给出了迄今为止已知的所有塞尔维亚物种的识别密钥。
    In this paper, the genus Vitrea Fitzinger, 1833 in Serbia is reviewed. All previous literature data on this genus from Serbia are summarised and used to discuss its distribution in the country and create distribution maps, supplemented by new material collected by the authors. All Serbian species are figured. For each species, a brief description of the examined specimens, data on previous findings in Serbia, the material (including types) that were analysed, the distribution and habitats in Serbia they inhabit, as well as remarks on specific species are given. A new species, Vitreavirgo Gojšina & Dedov, sp. nov., is described from a pit on Mt. Devica in eastern Serbia. Vitreapygmaea (O. Boettger, 1880) is reported for the first time for the territory of Serbia. As some Vitrea species have a narrow geographical range and prefer certain habitats, they are particularly vulnerable to habitat changes, which is also discussed in the paper. An identification key for all hitherto known Serbian species is given.
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  • 文章类型: Journal Article
    在这项研究中,叶甲虫属的所有物种,1963年从中国重新描述的基础上重新检查类型标本,一个新的物种,S.variegatussp.11月。来自南岭山脉,被描述。提供了三个中国品种的钥匙,以及这些物种的habiti和aedeagi的照片。
    In this study, all species of the leaf-beetle genus Sinoluperus Gressitt & Kimoto, 1963 from China are redescribed based on the reexamination of type specimens, and a new species, S.variegatussp. nov. from Nanling Mountains, is described. A key to the three Chinese species of Sinoluperus is provided, as well as photographs of the habiti and aedeagi of these species.
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  • 文章类型: Journal Article
    在检疫期间或在入侵建立或传播之前的早期阶段正确及时地识别入侵物种对于防止生物入侵至关重要。然而,由于不正确的分类学处理或鲁re的分类学工作引起的潜在入侵蚯蚓物种的分类学混乱,使得难以正确识别潜在的入侵威胁。通过分析线粒体细胞色素C氧化酶亚基I(COI)基因的公开DNA序列,我们证实了Amynthasmasatakae(Beddard,1892),东亚的一种游earth,有可能传播到世界其他地区,并指定了A.masatakae的两个新同义词:AmynthastralfamadoreBlakemore,2012syn。11月。太阳和江,2021合成。11月。此外,A.triastriatusususualisDong这个名字,江,元,赵和邱,2020年在名称上是不可用的,因为它是在没有ZooBank注册的电子期刊上发表的,并且没有明确声明建立新的名义分类税。用这个不可用的名称描述的样本实际上属于A.masataka。与GenBank中的序列相关的文献综述不足和错误的物种身份在本已令人困惑的earth分类学中引起了更多问题。
    Correct and timely identification of an invasive species during quarantine or at an early stage of invasion before establishment or spread is critical for preventing biological invasions. However, taxonomic confusion of potential invasive earthworm species caused by incorrect taxonomic treatment or reckless taxonomic work has made it difficult to properly recognize potential invasion threats. Through analyzing publicly available DNA sequences of the mitochondrial cytochrome c oxidase subunit I (COI) gene, we confirmed the validity of the specific status of Amynthasmasatakae (Beddard, 1892), a peregrine earthworm species in East Asia with the potential to spread to other regions of the world, and designated two new synonyms of A.masatakae: Amynthastralfamadore Blakemore, 2012 syn. nov. and Amynthasscaberulus Sun and Jiang, 2021 syn. nov. Additionally, the name A.triastriatususualis Dong, Jiang, Yuan, Zhao and Qiu, 2020 is nomenclaturally unavailable since it was published in an electronic journal without ZooBank registration and an explicit statement establishing a new nominal taxon. Specimens described under this unavailable name actually belong to A.masatakae. Inadequate literature review and erroneous species identities associated with sequences in GenBank have caused even more problems in the already confusing earthworm taxonomy.
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  • 文章类型: Journal Article
    目的:这篇综述旨在绘制分类框架,描述,以及沉浸式技术在牙科文献中的应用。
    方法:遵循系统评价和meta分析扩展范围评价(PRISMA-ScR)指南的首选报告项目,并且该协议已在开放科学框架平台(https://doi.org/10.17605/OSF。IO/H6N8M)。
    方法:在MEDLINE(通过PubMed)中进行了系统搜索,Scopus,和Cochrane图书馆数据库,并辅以手动搜索。
    方法:共纳入84篇,2019年至2023年之间的比例为81%。大多数研究是实验性的(62%),包括教育(25%),协议可行性(20%),体外(11%),和尸体(6%)。其他研究类型包括临床报告/技术文章(24%),临床研究(9%),给读者的技术说明/提示(4%),和随机对照试验(1%)。纳入研究的四分之三发表在口腔颌面外科(38%),牙科教育(26%),和植入物(12%)学科。显示方法包括头戴式显示设备(HMD)(55%),透过屏幕看(32%),2D屏幕显示(11%),和投影仪显示器(2%)。对沉浸式现实的描述是支离破碎的,并且不一致,因为缺乏明确的伞分类框架和包括虚拟现实(VR)在内的子集术语。增强现实(AR)混合现实(MR),增强虚拟性(AV),扩展现实,X现实
    结论:牙科中的沉浸式现实应用越来越受欢迎,在过去5年中出版物数量显着激增。在对沉浸式现实的描述中,歧义是显而易见的。基于显示(完整或部分)和现实类(VR,AR,或MR)被提议。
    结论:理解不同的现实类别可能会因为它们模糊的边界和概念重叠而令人困惑。沉浸式技术提供了新颖的教育和临床应用。这个领域正在快速发展。由于当前术语分散和不一致,一个全面的分类框架是必要的。
    This review aimed to map taxonomy frameworks, descriptions, and applications of immersive technologies in the dental literature.
    The Preferred reporting items for systematic reviews and meta-analyses extension for scoping reviews (PRISMA-ScR) guidelines was followed, and the protocol was registered at open science framework platform (https://doi.org/10.17605/OSF.IO/H6N8M).
    Systematic search was conducted in MEDLINE (via PubMed), Scopus, and Cochrane Library databases, and complemented by manual search.
    A total of 84 articles were included, with 81 % between 2019 and 2023. Most studies were experimental (62 %), including education (25 %), protocol feasibility (20 %), in vitro (11 %), and cadaver (6 %). Other study types included clinical report/technique article (24 %), clinical study (9 %), technical note/tip to reader (4 %), and randomized controlled trial (1 %). Three-quarters of the included studies were published in oral and maxillofacial surgery (38 %), dental education (26 %), and implant (12 %) disciplines. Methods of display included head mounted display device (HMD) (55 %), see through screen (32 %), 2D screen display (11 %), and projector display (2 %). Descriptions of immersive realities were fragmented and inconsistent with lack of clear taxonomy framework for the umbrella and the subset terms including virtual reality (VR), augmented reality (AR), mixed reality (MR), augmented virtuality (AV), extended reality, and X reality.
    Immersive reality applications in dentistry are gaining popularity with a notable surge in the number of publications in the last 5 years. Ambiguities are apparent in the descriptions of immersive realities. A taxonomy framework based on method of display (full or partial) and reality class (VR, AR, or MR) is proposed.
    Understanding different reality classes can be perplexing due to their blurred boundaries and conceptual overlapping. Immersive technologies offer novel educational and clinical applications. This domain is fast developing. With the current fragmented and inconsistent terminologies, a comprehensive taxonomy framework is necessary.
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  • 文章类型: Review
    The heterophyid trematode Metagonimus romanicus (Ciurea, 1915) (Digenea) is redescribed on the basis of type material from domestic dogs (Canis familiaris) in Romania, vouchers from experimentally infected cats (Felis catus) and adults recovered from golden hamsters (Mesocricetus auratus) infected with metacercariae from scales of chub (Squalius cephalus) and common nase (Chondrostoma nasus) (Cypriniformes: Leuciscidae) in Hungary. This trematode, endemic to Europe and neighbouring regions (northwestern Türkiye), was previously misidentified as M. yokogawai (Katsurada, 1912), a zoonotic parasite of humans in East Asia. However, the two species differ considerably both genetically and morphologically, e.g., in the position of the ventral sucker, the presence of the prepharynx, the anterior extent of the vitelline follicles and the posterior extent of the uterus. Metagonimus ciureanus (Witenberg, 1929) (syn. Dexiogonimus ciureanus Witenberg, 1929), described from domestic cats and dogs in Israel, is a valid species distributed in the Middle East and Transcaucasia, which is also confirmed by molecular data. It differs from all Metagonimus species, including M. romanicus, in having symmetrical testes instead of the oblique testes of the other congeners. The zoonotic significance of M. romanicus and M. ciureanus is unclear, but appears to be low in Europe, mainly because raw or undercooked, whole fish with scales are generally not consumed. Accidental infection of fishermen by metacercariae in the scales when cleaning fish is more likely, but has never been reported. Remains of cyprinoids with scales infected with metacercariae of Metagonimus spp. can be an important natural source of infection for dogs, cats, and other carnivores, which can serve as a reservoir for these parasites.
    UNASSIGNED: Petits trématodes intestinaux du genre Metagonimus (Digenea : Heterophyidae) en Europe et au Moyen-Orient : revue de parasites à potentiel zoonotique.
    UNASSIGNED: Le trématode Heterophyidae Metagonimus romanicus (Ciurea, 1915) (Digenea) est redécrit sur la base de matériel type provenant de chiens domestiques (Canis familiaris) en Roumanie, de vouchers issus de chats (Felis catus) infectés expérimentalement et d’adultes collectés chez des hamsters dorés (Mesocricetus auratus) infectés par des métacercaires provenant d’écailles de chevesne commun (Squalius cephalus) et de nase commun (Chondrostoma nasus) (Cypriniformes : Leuciscidae) de Hongrie. Ce trématode, endémique d’Europe et des régions voisines (nord-ouest de la Turquie), avait été précédemment identifié à tort comme étant M. yokogawai (Katsurada, 1912), un parasite zoonotique des humains en Asie de l’Est. Cependant, les deux espèces diffèrent considérablement sur le plan génétique et morphologique, par exemple par la position de la ventouse ventrale, la présence du prépharynx, l’étendue antérieure des follicules vitellins et l’étendue postérieure de l’utérus. Metagonimus ciureanus (Witenberg, 1929) (syn. Dexiogonimus ciureanus Witenberg, 1929), décrite chez des chats et des chiens domestiques en Israël, est une espèce valide répartie au Moyen-Orient et en Transcaucasie, ce qui est également confirmé par des données moléculaires. Cette espèce diffère de toutes les espèces de Metagonimus, y compris M. romanicus, par ses testicules symétriques au lieu des testicules obliques des autres congénères. L’importance zoonotique de M. romanicus et M. ciureanus n’est pas claire, mais semble faible en Europe, principalement parce que les poissons n’y sont généralement pas consommés crus ou insuffisamment cuits et entiers avec les écailles. L’infection accidentelle des pêcheurs par des métacercaires présents dans les écailles lors du nettoyage du poisson est plus probable mais n’a jamais été signalée. Les restes de poissons cyprinoïdes avec les écailles, infectés par des métacercaires de Metagonimus spp. peuvent être une source naturelle importante d’infection pour les chiens, les chats et autres carnivores, qui peuvent servir de réservoir à ces parasites.
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