Target of Rapamycin

雷帕霉素靶点
  • 文章类型: Journal Article
    过氧化氢(H2O2)是植物细胞在正常发育过程中自然产生的,是调节细胞代谢的信使。尽管它很重要,过氧化氢与雷帕霉素靶蛋白(TOR)通路的关系,以及它对细胞分裂的影响,分析得很差。在这项研究中,我们探索H2O2与TOR的相互作用,一种丝氨酸/苏氨酸蛋白激酶,在控制细胞生长中起着核心作用,尺寸,和拟南芥的新陈代谢。通过外源施用两种浓度的H2O2(0.5和1mM),我们可以关联发育特征,如主根生长,侧根形成,和新鲜的重量,与细胞周期基因CYCB1的表达;1,以及TOR的表达。当评估核糖体生物发生相关基因RPS27B的表达时,暴露于1mMH2O2处理后,增加了94.34%。这种增加被TOR抑制剂Torin2抑制。用抗坏血酸(AA)消除H2O2积累导致细胞分裂和TOR表达减少。在结果的背景下讨论了与H2O2对根部细胞周期和TOR表达的影响相关的潜在分子机制。
    Hydrogen peroxide (H2O2) is naturally produced by plant cells during normal development and serves as a messenger that regulates cell metabolism. Despite its importance, the relationship between hydrogen peroxide and the target of rapamycin (TOR) pathway, as well as its impact on cell division, has been poorly analyzed. In this study, we explore the interaction of H2O2 with TOR, a serine/threonine protein kinase that plays a central role in controlling cell growth, size, and metabolism in Arabidopsis thaliana. By applying two concentrations of H2O2 exogenously (0.5 and 1 mM), we could correlate developmental traits, such as primary root growth, lateral root formation, and fresh weight, with the expression of the cell cycle gene CYCB1;1, as well as TOR expression. When assessing the expression of the ribosome biogenesis-related gene RPS27B, an increase of 94.34% was noted following exposure to 1 mM H2O2 treatment. This increase was suppressed by the TOR inhibitor torin 2. The elimination of H2O2 accumulation with ascorbic acid (AA) resulted in decreased cell division as well as TOR expression. The potential molecular mechanisms associated with the effects of H2O2 on the cell cycle and TOR expression in roots are discussed in the context of the results.
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    雷帕霉素(TOR)激酶的靶标充当整合营养和能量信号以协调动物和植物中的细胞和生物体生理学的中央调节剂。尽管在理解植物TOR激酶的分子和细胞功能方面取得了重大进展,调节TOR活性的上游调节因子尚未完全阐明.在动物中,翻译控制的肿瘤蛋白(TCTP)被认为是TOR信号传导的关键参与者。这项研究揭示了黄瓜的两种TCTP亚型,当被引入拟南芥时,有助于平衡针对真菌病原体菊苣的生长和防御机制。我们假设植物TCTP充当TOR的上游调节剂,以响应黄瓜中Podosphaeraxanthii引起的白粉病。我们的研究进一步揭示了CsTCTP和小GTP酶之间的稳定相互作用,CsRab11A.瞬时转化测定表明CsRab11A参与了对黄硫疟原虫的防御,并通过CsTCTP促进了TOR信号的激活。此外,我们的发现表明,TOR在植物抗病性中的关键作用取决于其调节的活性;用TOR抑制剂(AZD-8055)预处理可增强黄瓜植物对黄硫的抗性。而用TOR激活剂(MHY-1485)预处理会增加易感性。这些结果表明了一种复杂的自适应响应机制,其中上游监管机构,CsTCTP和CsRab11A,协调调节TOR功能,以响应黄氏疟原虫,突出了植物-病原体相互作用的一个新方面。
    The target of rapamycin (TOR) kinase serves as a central regulator that integrates nutrient and energy signals to orchestrate cellular and organismal physiology in both animals and plants. Despite significant advancements having been made in understanding the molecular and cellular functions of plant TOR kinases, the upstream regulators that modulate TOR activity are not yet fully elucidated. In animals, the translationally controlled tumor protein (TCTP) is recognized as a key player in TOR signaling. This study reveals that two TCTP isoforms from Cucumis sativus, when introduced into Arabidopsis, are instrumental in balancing growth and defense mechanisms against the fungal pathogen Golovinomyces cichoracearum. We hypothesize that plant TCTPs act as upstream regulators of TOR in response to powdery mildew caused by Podosphaera xanthii in Cucumis. Our research further uncovers a stable interaction between CsTCTP and a small GTPase, CsRab11A. Transient transformation assays indicate that CsRab11A is involved in the defense against P. xanthii and promotes the activation of TOR signaling through CsTCTP. Moreover, our findings demonstrate that the critical role of TOR in plant disease resistance is contingent upon its regulated activity; pretreatment with a TOR inhibitor (AZD-8055) enhances cucumber plant resistance to P. xanthii, while pretreatment with a TOR activator (MHY-1485) increases susceptibility. These results suggest a sophisticated adaptive response mechanism in which upstream regulators, CsTCTP and CsRab11A, coordinate to modulate TOR function in response to P. xanthii, highlighting a novel aspect of plant-pathogen interactions.
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  • 文章类型: Journal Article
    海藻糖6-磷酸(Tre6P)是调节蔗糖水平的必需信号代谢产物,将生长和发育与代谢状态联系起来。我们假设Tre6P在介导蔗糖对基因表达的调控中起作用。为了测试这个,我们对拟南芥(拟南芥)植物进行了转录组学分析,这些植物在乙醇诱导型启动子的控制下表达了细菌海藻糖6-磷酸盐合成酶(TPS)。诱导导致Tre6P水平上升4倍,伴随着蔗糖的减少,超过13,000个转录本的显著变化(FDR≤0.05),以及超过5000个转录本的两倍或更大的变化。与9个已发表的对糖可用性的响应进行比较,这些变化中的一些与Tre6P的上升有关,而其他人可能是由于较低的蔗糖或其他间接影响。与Tre6P相关的变化包括抑制与光合作用相关的基因表达和诱导许多与生长相关的过程,包括核糖体生物发生。已知约500个饥饿相关基因被蔗糖非发酵-1相关激酶1(SnRK1)诱导。它们在很大程度上被Tre6P抑制,其方式与Tre6P抑制SnRK1一致。SnRK1还抑制许多参与生物合成和生长的基因。这些以更复杂的方式回应了Tre6P,指向与其他C信号通路相互作用的Tre6P。此外,升高的Tre6P修饰了编码SnRK1复合物和TPSII类调节亚基的基因的表达和FCS样ZINCFINGER蛋白,这些蛋白被认为调节SnRK1功能和与昼夜节律有关的基因,雷帕霉素的目标-,光,脱落酸,和其他激素信号。
    Trehalose 6-phosphate (Tre6P) is an essential signal metabolite that regulates the level of sucrose, linking growth and development to the metabolic status. We hypothesized that Tre6P plays a role in mediating the regulation of gene expression by sucrose. To test this, we performed transcriptomic profiling on Arabidopsis (Arabidopsis thaliana) plants that expressed a bacterial TREHALOSE 6-PHOSPHATE SYNTHASE (TPS) under the control of an ethanol-inducible promoter. Induction led to a 4-fold rise in Tre6P levels, a concomitant decrease in sucrose, significant changes (FDR ≤ 0.05) of over 13,000 transcripts, and two-fold or larger changes of over 5000 transcripts. Comparison with nine published responses to sugar availability allowed some of these changes to be linked to the rise in Tre6P, while others were probably due to lower sucrose or other indirect effects. Changes linked to Tre6P included repression of photosynthesis-related gene expression and induction of many growth-related processes including ribosome biogenesis. About 500 starvation-related genes are known to be induced by SUCROSE-NON-FERMENTING-1-RELATED KINASE 1 (SnRK1). They were largely repressed by Tre6P in a manner consistent with SnRK1 inhibition by Tre6P. SnRK1 also represses many genes that are involved in biosynthesis and growth. These responded to Tre6P in a more complex manner, pointing toward Tre6P interacting with other C-signaling pathways. Additionally, elevated Tre6P modified the expression of genes encoding regulatory subunits of the SnRK1 complex and TPS class II and FCS-LIKE ZINC FINGER proteins that are thought to modulate SnRK1 function and genes involved in circadian, TARGET OF RAPAMYCIN-, light, abscisic acid, and other hormone signaling.
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  • 文章类型: Journal Article
    在皮氏,吸血螨,血液喂养引起的卵黄发生的启动对其繁殖至关重要。然而,Gallinae及其上游基因中Vg的精确基因结构和生理功能,雷帕霉素靶蛋白(TOR),还没有被完全理解。这项研究揭示了D.gallinae中存在四个同源基因,命名为Dg-Vg1,类似Dg-Vg1,Dg-Vg2,Dg-Vg2,尤其是,首先在螨虫中鉴定出Dg-Vg2样。所有这些Vg基因的表达水平在成年雌性中明显高于其他阶段。采血后,这些基因的表达水平显著增加,随后下降,与鸡蛋生产保持一致。通过RNA干扰(RNAi)沉默Dg-Vgs导致繁殖力和卵孵化率降低,以及异常的胚胎发育,提示Dg-Vgs在卵形成和胚胎发育中的重要作用。此外,Dg-TOR的敲减会显著降低Dg-Vgs的表达,并对PRM的繁殖能力产生负面影响,表明TOR通过调节Dg-Vgs的表达影响PRM繁殖。总之,这些发现证明了Dg-Vgs和Dg-TOR在PRM繁殖中的关键作用,强调它们作为虫害防治目标的潜力。
    In Dermanyssus gallinae, a hematophagous mite, the initiation of vitellogenesis induced by blood feeding is essential for its reproduction. However, the precise gene structures and physiological functions of Vg in D. gallinae and its upstream gene, Target of Rapamycin (TOR), have not been fully understood. This study revealed the presence of four homologous genes within D. gallinae, named Dg-Vg1, Dg-Vg1-like, Dg-Vg2, and Dg-Vg2-like, especially, Dg-Vg2-like was firstly identified in the mites. The expression levels of all these Vg genes were significantly higher in adult females than other stages. Following blood feeding, the expression levels of these genes increased significantly, followed by a subsequent decrease, aligning with egg production. Silencing Dg-Vgs by RNA interference (RNAi) led to decreased fecundity and egg hatching rates, as well as abnormal embryonic development, suggesting a vital role for Dg-Vgs in both egg formation and embryonic development. Furthermore, the knockdown of Dg-TOR significantly reduced the expression of Dg-Vgs and negatively impacted the reproductive capabilities of PRMs, indicating that TOR influences PRM reproduction by regulating the expression of Dg-Vgs. In summary, these findings demonstrated the crucial roles of Dg-Vgs and Dg-TOR in PRM reproduction, highlighting their potential as targets for pest control.
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  • 文章类型: Journal Article
    植物生长与碳和能源状况的可用性密切相关。雷帕霉素靶(TOR)途径是植物同化C发育和生长的高度相关的代谢传感器和整合器。细胞壁约占细胞生物量的三分之一,C对这种结构的投资应该进行微调,以实现最佳增长。植物C状态在控制细胞壁合成速率中起着重要作用。TOR信号调节细胞生长和扩增,这是植物发育的基本过程。营养和能量的可用性,由TOR感知和集成,影响细胞分裂和伸长,最终影响细胞壁成分的合成和沉积。植物细胞壁在环境适应和胁迫响应中至关重要。TOR感知和内化各种环境线索,比如营养供应和压力。这些环境因素影响TOR活性,它调节细胞壁重塑以应对不断变化的条件。植物激素,包括生长素,赤霉素,和油菜素类固醇,还调节TOR信号传导和细胞壁相关过程。讨论了营养素与TOR调节的细胞壁途径之间的联系。
    Plant growth is intimately linked to the availability of carbon and energy status. The Target of rapamycin (TOR) pathway is a highly relevant metabolic sensor and integrator of plant-assimilated C into development and growth. The cell wall accounts for around a third of the cell biomass, and the investment of C into this structure should be finely tuned for optimal growth. The plant C status plays a significant role in controlling the rate of cell wall synthesis. TOR signaling regulates cell growth and expansion, which are fundamental processes for plant development. The availability of nutrients and energy, sensed and integrated by TOR, influences cell division and elongation, ultimately impacting the synthesis and deposition of cell wall components. The plant cell wall is crucial in environmental adaptation and stress responses. TOR senses and internalizes various environmental cues, such as nutrient availability and stresses. These environmental factors influence TOR activity, which modulates cell wall remodeling to cope with changing conditions. Plant hormones, including auxins, gibberellins, and brassinosteroids, also regulate TOR signaling and cell wall-related processes. The connection between nutrients and cell wall pathways modulated by TOR are discussed.
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  • 文章类型: Journal Article
    某些蛋白质组装成不同的复杂状态,每个在细胞中都有独特的功能。雷帕霉素靶蛋白(Tor)复合物1(TORC1)在信号通路中起着核心作用,使细胞对环境做出反应。包括营养状况信号。TORC1因其与各种疾病的关联而被广泛认可。出芽酵母酿酒酵母具有两种类型的TORC1,含Tor1的TORC1和含Tor2的TORC1,它们包含不同的组成蛋白,但被认为具有相同的功能。这里,我们对相关的复杂结构进行了计算建模,基于结构,合理地设计了可以形成Tor复合物2(TORC2)而不是TORC1的Tor2突变体,从而重新设计了复杂状态。Tor2突变体的功能分析显示两种类型的TORC1诱导不同的表型,观察到雷帕霉素的变化,咖啡因和细胞生长的pH依赖性,以及复制和按时间顺序排列的寿命。这些发现由具有巨大潜力的通用方法-基于模型结构的工程-有望为分子进化和寿命等各个领域提供进一步的见解。
    Certain proteins assemble into diverse complex states, each having a distinct and unique function in the cell. Target of rapamycin (Tor) complex 1 (TORC1) plays a central role in signalling pathways that allow cells to respond to the environment, including nutritional status signalling. TORC1 is widely recognised for its association with various diseases. The budding yeast Saccharomyces cerevisiae has two types of TORC1, Tor1-containing TORC1 and Tor2-containing TORC1, which comprise different constituent proteins but are considered to have the same function. Here, we computationally modelled the relevant complex structures and then, based on the structures, rationally engineered a Tor2 mutant that could form Tor complex 2 (TORC2) but not TORC1, resulting in a redesign of the complex states. Functional analysis of the Tor2 mutant revealed that the two types of TORC1 induce different phenotypes, with changes observed in rapamycin, caffeine and pH dependencies of cell growth, as well as in replicative and chronological lifespan. These findings uncovered by a general approach with huge potential - model structure-based engineering - are expected to provide further insights into various fields such as molecular evolution and lifespan.
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  • 文章类型: Journal Article
    雷帕霉素靶蛋白(TOR)代表一种普遍存在的激酶复合物,在几乎所有真核生物中都是细胞生长和代谢的主要调节因子。TOR是一种进化保守的蛋白激酶,作为一个中央信号枢纽,整合各种内部和外部线索来调节多种生物过程。这些过程共同对植物生长产生重大影响,发展,营养同化,光合作用,果实成熟,以及与微生物的相互作用。在植物领域,TOR综合体包括三个组成部分:TOR,RAPTOR,LST8这篇全面的综述提供了对TOR蛋白各个方面的见解,包括它的起源,结构,函数,以及在光合生物中起作用的调控和信号通路。此外,我们探讨了与这种关键蛋白激酶相关的未来观点。
    Target Of Rapamycin (TOR) represents a ubiquitous kinase complex that has emerged as a central regulator of cell growth and metabolism in nearly all eukaryotic organisms. TOR is an evolutionarily conserved protein kinase, functioning as a central signaling hub that integrates diverse internal and external cues to regulate a multitude of biological processes. These processes collectively exert significant influence on plant growth, development, nutrient assimilation, photosynthesis, fruit ripening, and interactions with microorganisms. Within the plant domain, the TOR complex comprises three integral components: TOR, RAPTOR, and LST8. This comprehensive review provides insights into various facets of the TOR protein, encompassing its origin, structure, function, and the regulatory and signaling pathways operative in photosynthetic organisms. Additionally, we explore future perspectives related to this pivotal protein kinase.
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  • 文章类型: Journal Article
    雷帕霉素靶蛋白(TOR)调节与植物生长相关的基本过程,发展,和细胞死亡通过调节代谢活动和翻译响应环境信号。ATP竞争性TOR抑制剂AZD8055抑制了感染了不相容的青枯病菌的本氏烟草的超敏反应(HR)细胞死亡。HR标记基因hin1的诱导表达也被AZD8055处理抑制。为了进一步阐明TOR调节HR细胞死亡的潜在机制,我们专注于TOR相关的ErbB3结合蛋白1(EBP1)。我们在N.benthamiana基因组中发现了四个EBP1直向同源物。所有四种EBP1直向同源物的表达水平均被蓝枯菌感染上调。四个NbEBP1直系同源物的沉默抑制了HR细胞死亡的诱导,hin1表达式,和活性氧的产生。这些结果表明,TOR信号通路有助于调节HR细胞的死亡以及与活性氧相关的信号。
    Target of rapamycin (TOR) regulates essential processes associated with plant growth, development, and cell death by modulating metabolic activities and translation in response to environmental signals. The ATP-competitive TOR inhibitor AZD8055 suppressed the hypersensitive response (HR) cell death in Nicotiana benthamiana infected with the incompatible Ralstonia solanacearum. The induced expression of the HR marker gene hin1 was also inhibited by the AZD8055 treatment. To further clarify the mechanisms underlying TOR-regulated HR cell death, we focused on TOR-related ErbB3-binding protein 1 (EBP1) in N. benthamiana (NbEBP1). We found four EBP1 orthologs in the N. benthamiana genome. The expression levels of all four EBP1 orthologs in N. benthamiana were up-regulated by the R. solanacearum infection. The silencing of the four NbEBP1 orthologs suppressed the induction of HR cell death, hin1 expression, and the production of reactive oxygen species. These results suggest that the TOR signaling pathway helps regulate HR cell death along with reactive oxygen species-related signaling in N. benthamiana.
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  • 文章类型: Journal Article
    线粒体功能对植物生长至关重要,但是调节生长和代谢以适应线粒体能量产生变化的机制尚不完全清楚。我们研究了CYTC-1表达降低的植物,CYTC-1是拟南芥中编码呼吸链成分细胞色素c(CYTc)的两个基因之一,了解线粒体如何传达其状态以协调新陈代谢和生长。CYTc缺乏的植物表现出降低的线粒体膜电位和较低的ATP含量,即使存在碳源。它们还表现出更高的游离氨基酸含量,诱导自噬,对长期黑暗造成的营养压力的抵抗力增强,类似于具有触发饥饿信号的植物。CYTc缺乏影响雷帕霉素靶蛋白(TOR)通路激活,减少S6激酶(S6K)和RPS6A磷酸化,以及由于蛋白酶体和自噬导致的蛋白质降解增加的总S6K蛋白质水平。TOR过表达可恢复cytc-1突变体的生长和其他受影响的参数,即使线粒体膜电位和ATP水平仍然很低。我们建议CYTc缺乏的植物通过减少TOR途径激活作为预防信号来调节生长以预期能量耗尽来协调其代谢和能量可用性。从而提供了一种机制,通过该机制,线粒体活性的变化被转导到细胞的其余部分。
    Mitochondrial function is essential for plant growth, but the mechanisms involved in adjusting growth and metabolism to changes in mitochondrial energy production are not fully understood. We studied plants with reduced expression of CYTC-1, one of two genes encoding the respiratory chain component cytochrome c (CYTc) in Arabidopsis, to understand how mitochondria communicate their status to coordinate metabolism and growth. Plants with CYTc deficiency show decreased mitochondrial membrane potential and lower ATP content, even when carbon sources are present. They also exhibit higher free amino acid content, induced autophagy, and increased resistance to nutritional stress caused by prolonged darkness, similar to plants with triggered starvation signals. CYTc deficiency affects target of rapamycin (TOR)-pathway activation, reducing S6 kinase (S6K) and RPS6A phosphorylation, as well as total S6K protein levels due to increased protein degradation via proteasome and autophagy. TOR overexpression restores growth and other parameters affected in cytc-1 mutants, even if mitochondrial membrane potential and ATP levels remain low. We propose that CYTc-deficient plants coordinate their metabolism and energy availability by reducing TOR-pathway activation as a preventive signal to adjust growth in anticipation of energy exhaustion, thus providing a mechanism by which changes in mitochondrial activity are transduced to the rest of the cell.
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  • 文章类型: Journal Article
    水稻产量约占农业利用的淡水资源的一半,导致淹没稻田的甲烷(CH4)等温室气体排放。为了应对这一挑战,环保和经济有效的节水技术已在水稻种植中广泛采用。然而,在水稻中实施节水处理(WST)与高达50%的大量产量损失以及氮利用效率(NUE)的降低有关。在这项研究中,我们发现在WST条件下,水稻中雷帕霉素(TOR)信号通路的靶标受到了损害。通过多聚体谱分析偶联转录组测序(polysome-seq)分析,我们观察到与TOR活性下调相关的WST的全球翻译显著减少.分子,生物化学,遗传分析揭示了对阳性TOR-S6K-RPS6和阴性TOR-MAF1模块对WST下翻译抑制的影响的新见解。有趣的是,铵通过增强TOR信号传导表现出更大的缓解WST下生长限制的能力,同时促进了铵和氮分配的吸收和利用。我们进一步证明,TOR通过5'非翻译区(5'UTR)在翻译水平上调节铵转运蛋白AMT1;1以及氨基酸通透酶APP1和二肽转运蛋白NPF7.3。总的来说,这些发现表明,增强TOR信号可以通过调节蛋白质合成和NUE的过程来减轻WST导致的水稻产量损失。本研究将有助于选育提高水肥利用率的水稻新品种。
    Rice production accounts for approximately half of the freshwater resources utilized in agriculture, resulting in greenhouse gas emissions such as methane (CH4) from flooded paddy fields. To address this challenge, environmentally friendly and cost-effective water-saving techniques have become widely adopted in rice cultivation. However, the implementation of water-saving treatments (WSTs) in paddy-field rice has been associated with a substantial yield loss of up to 50% as well as a reduction in nitrogen use efficiency (NUE). In this study, we discovered that the target of rapamycin (TOR) signaling pathway is compromised in rice under WST. Polysome profiling-coupled transcriptome sequencing (polysome-seq) analysis unveiled a substantial reduction in global translation in response to WST associated with the downregulation of TOR activity. Molecular, biochemical, and genetic analyses revealed new insights into the impact of the positive TOR-S6K-RPS6 and negative TOR-MAF1 modules on translation repression under WST. Intriguingly, ammonium exhibited a greater ability to alleviate growth constraints under WST by enhancing TOR signaling, which simultaneously promoted uptake and utilization of ammonium and nitrogen allocation. We further demonstrated that TOR modulates the ammonium transporter AMT1;1 as well as the amino acid permease APP1 and dipeptide transporter NPF7.3 at the translational level through the 5\' untranslated region. Collectively, these findings reveal that enhancing TOR signaling could mitigate rice yield penalty due to WST by regulating the processes involved in protein synthesis and NUE. Our study will contribute to the breeding of new rice varieties with increased water and fertilizer utilization efficiency.
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