Microorganism

微生物
  • 文章类型: Journal Article
    磷(P)和铁(Fe)是植物生长必需的两种矿质养分。广泛观察到磷和铁的相互作用会影响它们在土壤中的有效性,并影响它们在植物中的稳态。近年来受到了极大的关注。这篇综述总结了土壤特性激活不溶性Fe-P络合物的最新进展,微生物,和植物。此外,我们阐明了植物如何适应Fe-P相互作用的生理和分子机制。这篇综述还讨论了当前的局限性,并提出了通过优化作物中磷和铁的利用效率来促进可持续农业的潜在途径。
    Phosphorus (P) and iron (Fe) are two essential mineral nutrients in plant growth. It is widely observed that interactions of P and Fe could influence their availability in soils and affect their homeostasis in plants, which has received significant attention in recent years. This review presents a summary of latest advances in the activation of insoluble Fe-P complexes by soil properties, microorganisms, and plants. Furthermore, we elucidate the physiological and molecular mechanisms underlying how plants adapt to Fe-P interactions. This review also discusses the current limitations and presents potential avenues for promoting sustainable agriculture through the optimization of P and Fe utilization efficiency in crops.
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  • 文章类型: Journal Article
    钢渣是一种工业固体废弃物,它含有丰富的钙元素,为微生物矿化提供了新的钙源。本研究用微生物和钢渣处理胶结回填材料以提高其性能。微生物处理对强度的影响,微观结构,回填的孔隙特征是使用强度测试评估的,核磁共振,扫描电子显微镜,和X射线衍射。结果表明:(1)微生物矿化和水化反应同时发生;(2)当细菌溶液的比例超过50%时,微生物过度消耗Ca2+,阻碍了后续的水化反应;(3)钢渣基胶结回填材料中细菌溶液的添加量应小于50%,其强度增加高达22.10%;(4)过量的细菌溶液急剧降低回填的强度甚至21.41%;(5)细菌溶液的添加影响孔隙特性。50%的细菌溶液可以使回填达到其最低孔隙率。强度与孔隙率成反比关系,直径,和圆度(σ=ax+b,a<0)。
    Steel slag is an industrial solid waste, which can provide a new calcium source for microbial mineralization as it contains abundant calcium elements. This study treated cemented backfill material with microorganisms and steel slag to enhance its performance. The influence of microbial treatment on the strength, microstructure, and pore characteristics of the backfill was assessed using a strength test, nuclear magnetic resonance, scanning electron microscopy, and X-ray diffraction. The results indicate that (1) the microbial mineralization and the hydration reaction take place at the same time; (2) when the proportion of bacterial solution exceeded 50%, microorganisms excessively consumed Ca2+, which hindered the following hydration reaction; (3) the additional amount of bacterial solution added into the steel-slag-based cemented backfill material should be less than 50%, which increases the strength by up to 22.10%; (4) the excessive bacterial solution sharply reduces the strength of the backfill even by 21.41%; and (5) the addition of bacterial solution affects the pore characteristics. A 50% bacterial solution can make backfill reach its lowest porosity. The strength has an inversely proportional relationship with porosity, diameter, and roundness (σ = ax + b, a < 0).
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  • 文章类型: Journal Article
    历史上,抗微生物剂已用于治疗人类和动物的微生物疾病。但是在这段时间里,由于无知带来的越来越多的不当使用,对特定微生物成功的抗生素开始失去效力,疏忽的态度,方法不当。我们进行这项研究的目的是确定知识,态度,鉴于全球和撒哈拉以南非洲日益增长的抗菌素耐药性问题,以及医生在抗生素使用方面的做法。
    在摩加迪沙的一家三级医院,索马里,进行了一项横断面调查研究,以评估专家和研究助理的知识,态度,行为,意识,以及有关抗生素使用和抗生素耐药性的实践。在自愿的基础上,对参与者采用了由2个部分和22个问题组成的调查表。
    在参加这项研究的202名医生中,49名(24.3%)是专家,助理人数为153人(75.7%)。146名受访者(72.3%)报告了每周平均1至10个抗生素盒的处方。在医生中,只有27人(13.4%)在开抗生素时不需要帮助.最经常获得的支持来源是传染病专家(43.1%)和国家/国际抗菌指南(32.2%)。导致索马里抗生素耐药性的三大因素包括滥用抗生素(61.4%),医生开出的不必要处方(44.6%),大多数机构都没有传染病专家(44.1%)。
    由于近年来在全球范围内观察到了令人震惊的抗菌素耐药性水平,我们的调查结果将有助于通过衡量他们的看法来教育我们的医生,态度,以及撒哈拉以南非洲合理使用抗生素的知识。这将提供更好的患者结果。
    UNASSIGNED: Historically, antimicrobials have been used to treat microbial illnesses in humans and animals. But throughout this time, antibiotics that had been successful against particular microorganisms started to lose their effectiveness due to rising inappropriate use brought on by ignorance, negligent attitudes, and improper methods. Our goal in conducting this study was to ascertain the knowledge, attitudes, and practices of doctors with relation to the use of antibiotics in light of the growing global and Sub-Saharan African problem of antimicrobial resistance.
    UNASSIGNED: In a tertiary hospital in Mogadishu, Somalia, a cross-sectional survey study was carried out to assess experts\' and research assistants\' knowledge, attitudes, behavior, awareness, and practices regarding the use of antibiotics and antibiotic resistance. A questionnaire consisting of 2 sections and 22 questions was applied to the participants on a voluntary basis.
    UNASSIGNED: Among the 202 doctors that participated in the study, 49 (24.3%) were specialists, and 153 (75.7%) were assistants. Prescriptions for one to ten antibiotic boxes per week on average were reported by 146 respondents (72.3%). Of the physicians, just 27 (13.4%) did not require assistance when prescribing an antibiotic. The most often accessed sources of support were experts in infectious diseases (43.1%) and national/international antimicrobial guidelines (32.2%). The top three factors contributing to antibiotic resistance in Somalia include misuse of antibiotics (61.4%), unnecessary prescriptions written by doctors (44.6%), and an absence of infectious disease specialists in most institutions (44.1%).
    UNASSIGNED: As an alarming level of antimicrobial resistance has been observed globally in recent years, the results of our survey will help educate our doctors by gauging their perceptions, attitudes, and knowledge about rational antibiotic use in Sub-Saharan Africa. This will provide better patient outcomes.
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  • 文章类型: Journal Article
    失眠,作为情绪疾病之一,近年来一直在增加,这对人们的生活和工作有很大的影响。因此,研究人员渴望找到更完美的治疗方法。微生物组-肠-脑轴是近年来国外逐渐流行的一种新理论,在失眠领域产生了深远的影响。近年来,中医药在治疗失眠方面发挥着越来越重要的作用,尤其是针灸和中草药。是中医治疗失眠的主要方法。本文主要回顾了“微生物-肠-脑轴”理论与中医和针灸在中医系统下的结合程度。探讨"微生物-肠-脑轴"理论指导下中医及针灸治疗失眠的作用机制,以期为失眠的诊断和治疗提供新的思路。
    Insomnia, as one of the emotional diseases, has been increasing in recent years, which has a great impact on people\'s life and work. Therefore, researchers are eager to find a more perfect treatment. The microbiome-gut-brain axis is a new theory that has gradually become popular abroad in recent years and has a profound impact in the field of insomnia. In recent years, traditional Chinese medicine (TCM) has played an increasingly important role in the treatment of insomnia, especially acupuncture and Chinese herbal medicine. It is the main method of TCM in the treatment of insomnia. This paper mainly reviews the combination degree of \"microorganism-gut-brain axis\" theory with TCM and acupuncture under the system of TCM. To explore the mechanism of TCM and acupuncture in the treatment of insomnia under the guidance of \"microorganism-gut-brain axis\" theory, in order to provide a new idea for the diagnosis and treatment of insomnia.
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  • 文章类型: Journal Article
    背景:玉米和大豆的中继间作可以提高土地生产力。然而,这种做法中N2O排放背后的机制尚不清楚。进行了双因素随机区组田间试验,以揭示全添加剂玉米-大豆中继间作中N2O排放的机理。因素A是三个种植系统-也就是说,单作玉米(ZeamaysL.),单一栽培大豆(甘氨酸maxL.Merr.)和玉米-大豆套种。因素B是不同的N供应,不含N,还原N和常规N。N2O排放的差异,土壤性质,对根际细菌群落和产量优势进行了评价。
    结果:土地当量比为1.55-2.44,累积N2O排放量(CEN2O$$\\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}}$$)在间作中明显低于单作60.2%,分别。减少N下降CEN2O$$\\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}}中继间作改变了土壤特性-例如,土壤有机质,总N,NH4+$${\\mathrm{NH}}_4^{+}$$和蛋白酶活性-并改善了土壤微生物群落-例如,变形杆菌和酸性杆菌。间作通过直接抑制土壤氮素循环过程中nirS-和amoA-调控的N2O生成,减少了CEN2O$\\mathrm{C}{\\mathrm{E}}_{\\mathrm{N}}_2\\\mathrm{O}}$$,或nirS-和amoA-介导的土壤特性转变为间接降低CEN2O$\\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}}$$。减少N直接减少CEN2O$$\\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}}$$$通过减少土壤N含量和减少土壤微生物活性来缓解土壤N循环中产生的N2O。
    结论:在减少氮供应的情况下进行全加性玉米-大豆中继间作提供了一种通过改变根际细菌群落和土壤氮循环来减轻N2O排放而不损害产量优势的方法。©2024化学工业学会。
    BACKGROUND: Relay intercropping of maize and soybean can improve land productivity. However, the mechanism behind N2O emissions in this practice remains unclear. A two-factor randomized block field trial was conducted to reveal the mechanism of N2O emissions in a full additive maize-soybean relay intercropping. Factor A was three cropping systems - that is, monoculture maize (Zea mays L.), monoculture soybean (Glycine max L. Merr.) and maize-soybean relay intercropping. Factor B was different N supply, containing no N, reduced N and conventional N. Differences in N2O emissions, soil properties, rhizosphere bacterial communities and yield advantage were evaluated.
    RESULTS: The land equivalent ratio was 1.55-2.44, and the cumulative N2O emission ( C E N 2 O $$ \\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}} $$ ) was notably lower by 60.2% in intercropping than in monoculture, respectively. Reduced N declined C E N 2 O $$ \\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}} $$ without penalty on the yield advantages. The relay intercropping shifted soil properties - for example, soil organic matter, total N, NH 4 + $$ {\\mathrm{NH}}_4^{+} $$ and protease activity - and improved the soil microorganism community - for example, Proteobacteria and Acidobacteria. Intercropping reduced C E N 2 O $$ \\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}} $$ by directly suppressing nirS- and amoA-regulated N2O generation during soil N cycling, or nirS- and amoA-mediated soil properties shifted to reduce C E N 2 O $$ \\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}} $$ indirectly. Reduced N directly reduced C E N 2 O $$ \\mathrm{C}{\\mathrm{E}}_{{\\mathrm{N}}_2\\mathrm{O}} $$ by decreasing soil N content and reducing soil microorganism activities to alleviate N2O produced in soil N cycling.
    CONCLUSIONS: Conducting a full additive maize-soybean relay intercropping with reduced nitrogen supply provides a way to alleviate N2O emissions without the penalty on the yield advantage by changing rhizosphere bacterial communities and soil N cycling. © 2024 Society of Chemical Industry.
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  • 文章类型: Journal Article
    本研究旨在确定微生物群落,短链脂肪酸(SCFA),和Bulang泡茶在发酵过程中的挥发物。16SrRNA和ITS测序显示,泡茶以植物乳杆菌为主,未分类的肠杆菌科,未分类的去细菌,念珠菌,sphaerospermum枝孢霉,和未分类的曲霉。SCFA的整体含量增加,乙酸含量最高。使用差异代谢组学分析共检测了398种差异挥发性代谢物。在这些不同的挥发性化合物中,十个关键的挥发性化合物,包括(Z)-4-庚烯,1-(2-噻吩基)-乙酮,5-甲基-(E)-2-庚烯-4-酮,2-乙氧基-3-甲基吡嗪,对甲酚,2-甲氧基苯酚,4-甲基戊酸,3-乙基苯酚,对-薄荷烯-8-硫醇,根据气味活性值(OAV)筛选2-仲丁基-3-甲氧基吡嗪。Spearman相关分析显示SCFA和挥发性化合物与微生物的高度相关,尤其是植物乳杆菌和sphaerospermum。本研究为阐明布朗泡茶风味品质形成机理提供了理论依据。
    The present study aimed to determine microbial community, short-chain fatty acids (SCFAs), and volatilome of Bulang pickled tea during fermentation. Sequencing of 16S rRNA and ITS revealed that Bualng pickled tea was dominated by Lactobacillus plantarum, unclassified Enterobacteriaceae, unclassified Debaryomyces, Candida metapsilosis, Cladosporium sphaerospermum, and unclassified Aspergillus. The overall contents of SCFAs increased, with acetic acid showing the highest content. A total of 398 differential volatile metabolites were detected using differential metabolomics analysis. Out of these different volatile compounds, ten key volatile compounds including (Z)-4-heptenal, 1-(2-thienyl)-ethanone, 5-methyl-(E)-2-hepten-4-one, 2-ethoxy-3-methylpyrazine, p-cresol, 2-methoxy-phenol, ethy-4-methylvalerate, 3-ethyl-phenol, p-menthene-8-thiol, and 2-s-butyl-3-methoxypyrazinewere were screened based on odor activity value (OAV). The Spearman correlation analysis showed a high correlation of SCFAs and volatile compounds with microorganisms, especially L. plantarum and C. sphaerospermum. This study provided a theoretical basis for elucidating the flavor quality formation mechanism of Bulang pickled tea.
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  • 文章类型: Journal Article
    检测并分析IIIB期前列腺炎患者低强度脉冲超声(LIPUS)治疗前后前列腺分泌物(EPS)中微生物的变化。探讨LIPUS治疗慢性前列腺炎(CP)的作用机制。在LIPUS治疗之前和之后,将25例IIIB前列腺炎患者(使用Dirichlet-多项方法估计研究能力,使用25个样本量在α=0.05时达到96.5%)分为两组。采用高通量第二代测序技术检测并分析处理前后EPS中细菌16s核糖体可变区的相对丰度。通过生物信息学软件和数据库对数据进行分析,与P<0.05的差异被认为具有统计学意义。Beta多样性剖析显示,各组间存在显著差别(P=0.046)。LEfSe在LIPUS治疗前后检测到IIIB前列腺炎患者EPS中的四种特征微生物。通过DESeq2方法在组间进行多重比较后,发现了六种不同的微生物。LIPUS可以通过改变EPS的菌群结构改善患者的临床症状,稳定和影响常驻细菌或机会性病原体。
    To detect and analyze the changes of microorganisms in expressed prostatic secretion (EPS) of patients with IIIB prostatitis before and after low-intensity pulsed ultrasound (LIPUS) treatment, and to explore the mechanism of LIPUS in the treatment of chronic prostatitis (CP). 25 patients (study power was estimated using a Dirichlet-multinomial approach and reached 96.5% at α = 0.05 using a sample size of 25) with IIIB prostatitis who were effective in LIPUS treatment were divided into two groups before and after LIPUS treatment. High throughput second-generation sequencing technique was used to detect and analyze the relative abundance of bacterial 16 s ribosomal variable regions in EPS before and after treatment. The data were analyzed by bioinformatics software and database, and differences with P < 0.05 were considered statistically significant. Beta diversity analysis showed that there was a significant difference between groups (P = 0.046). LEfSe detected four kinds of characteristic microorganisms in the EPS of patients with IIIB prostatitis before and after LIPUS treatment. After multiple comparisons among groups by DESeq2 method, six different microorganisms were found. LIPUS may improve patients\' clinical symptoms by changing the flora structure of EPS, stabilizing and affecting resident bacteria or opportunistic pathogens.
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  • 文章类型: Journal Article
    大型植物的分解在以大型植物为主的富营养化湖泊的营养循环中起着至关重要的作用。在植物分解机理和微生物影响的研究迅速发展的同时,奇怪的是,从50年前开始,植物分解模型一直停滞在单阶段模型中,不考虑任何重要因素。我们的研究进行了原位实验,并确定了分解相关微生物的最佳指标,从而建立微生物对分解速率(k_RDR)的影响模型。在逐步回归中使用向后消除,我们发现,独立变量的最佳子集-特异性γ变形杆菌-Q-L,放线菌-Q-L,和Ascomycota-Q-L-将调整后的R平方(Ra2)增加到0.93,为分解速率提供了最佳模型(p=0.002)。此外,k_RDR可以通过ACHB-Q-L的协同参数进行建模,LDB-Q-L,和AB-Q-L代表细菌,和真菌的SFQ,尽管Ra2略低,为0.7-0.9(p<0.01)。我们研究的主要贡献在于两个关键方面。首先,我们引入了微生物建模的最佳指标,选择碎片表面微生物而不是沉积物微生物,并将绝对丰度优先于相对丰度。其次,我们的模型代表了碎片建模的显著进步。除了阐明我们工作的重点和创新方面,我们还解决了现有的局限性,并提出了未来研究的方向。摘要:本研究探讨了与分解相关的微生物的最佳指标,为增强湖泊养分循环模拟提供精确的微生物模型。
    The decomposition of macrophytes plays a crucial role in the nutrient cycles of macrophyte-dominated eutrophication lakes. While research on plant decomposition mechanisms and microbial influences has rapid developed, it is curious that plant decomposition models have remained stagnant at the single-stage model from 50 years ago, without endeavor to consider any important factors. Our research conducted in-situ experiments and identified the optimal metrics for decomposition-related microbes, thereby establishing models for microbial impacts on decomposition rates (k_RDR). Using backward elimination in stepwise regression, we found that the optimal subset of independent variables-specifically Gammaproteobacteria-Q-L, Actinobacteriota-Q-L, and Ascomycota-Q-L-increased the adjusted R-squared (Ra2) to 0.93, providing the best modeling for decomposition rate (p = 0.002). Additionally, k_RDR can be modeled by synergic parameters of ACHB-Q-L, LDB-Q-L, and AB-Q-L for bacteria, and SFQ for fungi, albeit with a slightly lower Ra2 of 0.7-0.9 (p < 0.01). The primary contribution of our research lies in two key aspects. Firstly, we introduced optimal metrics for modeling microbes, opting for debris surface microbes over sediment microbes, and prioritizing absolute abundance over relative abundance. Secondly, our model represents a noteworthy advancement in debris modeling. Alongside elucidating the focus and innovative aspects of our work, we also addressed existing limitations and proposed directions for future research. SYNOPSIS: This study explores optimum metrics for decomposition-related microbes, offering precise microbial models for enhanced lake nutrient cycle simulation.
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  • 文章类型: Journal Article
    苔藓植物,第二大植物群,作为土地的早期殖民者,起着至关重要的作用,并且是具有巨大经济潜力的天然物质的丰富来源。微生物,特别是细菌,蓝藻,真菌与植物形成复杂的联系,特别是苔藓植物,有助于陆地生态系统的生态功能,有时也会产生负面影响。这篇综述阐明了内生细菌在促进植物生长中的关键作用,促进营养循环,加强环境卫生。它全面探索了各种生态系统中真菌和细菌内生菌的多样性和生态意义。此外,它突出了在选定苔藓物种中观察到的苔藓氮动态。在整个审查过程中,重点放在苔藓植物和微生物之间的共生相互依存,为未来的研究工作提供基础见解。通过揭示复杂的苔藓植物-微生物联系,这项研究促进了我们对植物之间复杂相互作用的理解,微生物,和他们的环境,为环境和生物技术领域的进一步研究和应用铺平了道路。
    Bryophytes, the second-largest group of plants, play a crucial role as early colonizers of land and are a prolific source of naturally occurring substances with significant economic potential. Microorganisms, particularly bacteria, cyanobacteria, fungi form intricate associations with plants, notably bryophytes, contributing to the ecological functioning of terrestrial ecosystems and sometimes it gives negative impact also. This review elucidates the pivotal role of endophytic bacteria in promoting plant growth, facilitating nutrient cycling, and enhancing environmental health. It comprehensively explores the diversity and ecological significance of fungal and bacterial endophytes across various ecosystems. Furthermore, it highlights the moss nitrogen dynamics observed in select moss species. Throughout the review, emphasis is placed on the symbiotic interdependence between bryophytes and microorganisms, offering foundational insights for future research endeavors. By shedding light on the intricate bryophyte-microorganism associations, this study advances our understanding of the complex interplay between plants, microbes, and their environment, paving the way for further research and applications in environmental and biotechnological realms.
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  • 文章类型: Journal Article
    越来越多的证据表明,微生物合成在生产高附加值产品中起着重要作用。然而,由于宿主菌株的代谢负担增加,微生物单一培养通常会阻碍代谢物的产生并限制可扩展性。相比之下,共培养是一种更灵活的方法,可以提高环境适应性,降低整体代谢负担。定义明确的共培养微生物聚生体可以挖掘其代谢潜力,以获得尚未发现的和预先存在的代谢物。这篇综述的重点是使用共同文化战略及其潜在机制来提高产品的生产。值得注意的是,理解微生物相互作用的重要性,不同的沟通方式,遗传信息,强调了共同培养系统中涉及的模块化共同培养。此外,它解决了当前的挑战,并概述了微生物共培养的潜在未来方向。这篇综述提供了更好地了解有趣的互动和交流的多样性和复杂性,以促进共同文化技术的发展。
    Increasing evidence shows that microbial synthesis plays an important role in producing high value-added products. However, microbial monoculture generally hampers metabolites production and limits scalability due to the increased metabolic burden on the host strain. In contrast, co-culture is a more flexible approach to improve the environmental adaptability and reduce the overall metabolic burden. The well-defined co-culturing microbial consortia can tap their metabolic potential to obtain yet-to-be discovered and pre-existing metabolites. This review focuses on the use of a co-culture strategy and its underlying mechanisms to enhance the production of products. Notably, the significance of comprehending the microbial interactions, diverse communication modes, genetic information, and modular co-culture involved in co-culture systems were highlighted. Furthermore, it addresses the current challenges and outlines potential future directions for microbial co-culture. This review provides better understanding the diversity and complexity of the interesting interaction and communication to advance the development of co-culture techniques.
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