Microorganism

微生物
  • 文章类型: Journal Article
    免疫疗法通过利用免疫系统的先天能力来对抗恶性肿瘤,彻底改变了癌症治疗。尽管肿瘤抗原有望刺激抗肿瘤免疫反应,它们的临床应用受到引起强大而持久的免疫反应的限制的阻碍,肿瘤异质性和免疫逃避机制加剧。对宿主同源微生物抗原的免疫原性特性的最新见解引起了人们对它们增强抗肿瘤免疫力同时最小化脱靶效应的潜力的兴趣。本文综述了微生物抗原肽在肿瘤免疫治疗中的治疗潜力。首先概述了肿瘤抗原及其在临床翻译中的挑战。我们进一步探索微生物与肿瘤发展之间的复杂关系,阐明分子模拟的概念及其对肿瘤相关抗原免疫识别的意义。最后,我们讨论了鉴定和表征微生物抗原肽的方法,强调其免疫原性和治疗应用前景。
    Immunotherapy has revolutionized cancer treatment by leveraging the immune system\'s innate capabilities to combat malignancies. Despite the promise of tumor antigens in stimulating anti-tumor immune responses, their clinical utility is hampered by limitations in eliciting robust and durable immune reactions, exacerbated by tumor heterogeneity and immune evasion mechanisms. Recent insights into the immunogenic properties of host homologous microbial antigens have sparked interest in their potential for augmenting anti-tumor immunity while minimizing off-target effects. This review explores the therapeutic potential of microbial antigen peptides in tumor immunotherapy, beginning with an overview of tumor antigens and their challenges in clinical translation. We further explore the intricate relationship between microorganisms and tumor development, elucidating the concept of molecular mimicry and its implications for immune recognition of tumor-associated antigens. Finally, we discuss methodologies for identifying and characterizing microbial antigen peptides, highlighting their immunogenicity and prospects for therapeutic application.
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  • 文章类型: Journal Article
    背景/目的:胃食管反流病(GORD)是由胃内容物回流到食管和口腔引起的。它可以导致侵蚀和溃疡形式的粘膜损伤。我们过去的研究表明,酸反流的严重程度和疾病进展与远端食道微生物群的变化有关。这项研究的目的是探讨GORD患者口腔微生物群是否发生了变化,并建立与反流严重程度的关联。方法:从58例出现反流症状的患者中收集新鲜漱口水样品,并进行24hpH监测。根据DeMeester评分将参与者分为三组:正常(<14.72),轻度(14.2-50),中度/重度(>51)。使用高变标签测序和分析16SrRNA基因的V1-V3区产生微生物身份和多样性。结果:采用Chiao1多样性指数和Shannon多样性指数,各组之间的口腔微生物区系均未发现差异。轻度组的微生物群显示,齿科罗西亚和劳特罗皮亚减少,与正常组相比,Moryella和Clostridiales_1增加。在中度/重度组中,与正常组相比,罗西娅的丰度降低,而Schwartzia,Rs_045,Paludibacter,S.Satelles,密螺旋体,T.socranskii都增加了丰度。与中度/重度相比,轻度组的苍白普氏菌丰度较高,而S.satelles和Paludibacter丰度较低。结论:我们的研究表明口腔微生物组显示酸反流严重程度组之间存在显着差异,按DeMeester得分分类。
    Background/Objectives: Gastroesophageal reflux disease (GORD) is caused by gastric contents refluxing back into the oesophagus and oral cavity. It can lead to injuries to the mucosa in the form of erosion and ulcers. Our past research have shown acid reflux severity and disease progression is associated with alternations in the microbiota of the distal oesophagus. The aim of this study was to explore whether changes in the oral microbiota occurred in GORD patients and establish any associations with reflux severity. Methods: Fresh mouthwash samples were collected from 58 patients experiencing reflux symptoms referred for 24 h pH monitoring. The participants were categorised into three groups based on their DeMeester scores: Normal (<14.72), Mild (14.2-50), and Moderate/severe (>51). Microorganism identity and diversity were generated using hypervariable tag sequencing and analysing the V1-V3 region of the 16S rRNA gene. Results: No differences in microbiota diversity were found in oral microbiota between groups using the Chiao1 diversity index and Shannon diversity index. Microbiota in the Mild group showed reductions in Rothia dentocariosa and Lautropia, while Moryella and Clostridiales_1 were increased compared with the Normal group. In the Moderate/severe group, the abundance of Rothia aeria was reduced compared with the Normal group, while Schwartzia, Rs_045, Paludibacter, S. satelles, Treponema, and T. socranskii all had increased abundance. The abundance of Prevotella pallens was higher in the Mild group compared with Moderate/severe, while S. satelles and Paludibacter abundances were lower. Conclusions: Our study shows the oral microbiome show significant differences between acid reflux severity groups, as categorised by DeMeester score.
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  • 文章类型: Journal Article
    酵母培养物(YC)增强反刍动物的性能,但由于YC成分复杂,影响瘤胃发酵的物质不确定,其作用机制尚不清楚。本研究的目的是通过研究YC对瘤胃发酵的影响,确定YC中有效代谢产物的组成。生长和屠宰性能,血清指数,瘤胃发酵参数,瘤胃微生物,和羔羊体内的代谢产物.
    在试验1中,成功生产了各种YC,为识别有效代谢物提供原料。实验分为5个处理组,每组重复5个:对照组(不含添加剂的基础日粮)和YC组分别添加4种不同酵母培养物0.625‰,分别(A组,B,C,andD).在体外3、6、12和24h确定瘤胃发酵参数。建立单因素回归模型多因素关联效应指数(MFAEI;y),将影响体外瘤胃发酵的因素与YC代谢产物(x)进行关联。这确定了促进瘤胃发酵的代谢物和最佳YC物质水平。在试验2中,排除了YC中与MFAEI非正相关的代谢物,有效物质与纯化学品(M组)合用。本实验基于YC代谢物对羔羊生长的影响,验证了它们在羔羊生产中的有效性。屠宰性能,血清指数,瘤胃参数,微生物,和代谢物。将30只体况良好、体重相近的跨代公羊(小尾寒阳‰×澳大利亚白羊‰)分为3个治疗组,每组10个重复:对照组,YC组,纯化学品组合组(M组)。
    在第30天和第60天测量了生长性能和血清指数,瘤胃发酵参数,微生物,在第60天测量代谢物。M组敷料百分比显著增加,显著降低羔羊的GR值(p<0.05)。生长激素(GH)的浓度,皮质醇,胰岛素(INS),M组瘤胃VFA显著增高(p<0.05)。
    这些实验证实YC或其筛选的有效代谢产物对羔羊屠宰性能有积极影响,瘤胃发酵,和微生物代谢。
    UNASSIGNED: Yeast culture (YC) enhances ruminant performance, but its functional mechanism remains unclear because of the complex composition of YC and the uncertain substances affecting rumen fermentation. The objective of this study was to determine the composition of effective metabolites in YC by exploring its effects on rumen fermentation in vitro, growth and slaughter performance, serum index, rumen fermentation parameters, rumen microorganisms, and metabolites in lambs.
    UNASSIGNED: In Trial 1, various YCs were successfully produced, providing raw materials for identifying effective metabolites. The experiment was divided into 5 treatment groups with 5 replicates in each group: the control group (basal diet without additives) and YC groups were supplemented with 0.625‰ of four different yeast cultures, respectively (groups A, B, C, and D). Rumen fermentation parameters were determined at 3, 6, 12, and 24 h in vitro. A univariate regression model multiple factor associative effects index (MFAEI; y) was established to correlate the most influential factors on in vitro rumen fermentation with YC metabolites (x). This identified the metabolites promoting rumen fermentation and optimal YC substance levels. In Trial 2, metabolites in YC not positively correlated with MFAEI were excluded, and effective substances were combined with pure chemicals (M group). This experiment validated the effectiveness of YC metabolites in lamb production based on their impact on growth, slaughter performance, serum indices, rumen parameters, microorganisms, and metabolites. Thirty cross-generation rams (Small tail Han-yang ♀ × Australian white sheep ♂) with good body condition and similar body weight were divided into three treatment groups with 10 replicates in each group: control group, YC group, pure chemicals combination group (M group).
    UNASSIGNED: Growth performance and serum index were measured on days 30 and 60, and slaughter performance, rumen fermentation parameters, microorganisms, and metabolites were measured on day 60. The M group significantly increased the dressing percentage, and significantly decreased the GR values of lambs (p  < 0.05). The concentration of growth hormone (GH), Cortisol, insulin (INS), and rumen VFA in the M group significantly increased (p < 0.05).
    UNASSIGNED: These experiments confirmed that YC or its screened effective metabolites positively impact lamb slaughter performance, rumen fermentation, and microbial metabolism.
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  • 文章类型: Journal Article
    由于动物和人类之间复杂的相互作用,牲畜的食品安全是至关重要的问题。病原体有可能在动物性食品处理过程的每个阶段传播,包括育种,processing,包装,storage,交通运输,营销和消费。此外,抗生素在家畜中的应用是一个有争议的问题,因为,虽然它们可以对抗食源性人畜共患病原体,促进动物生长和生产力,它们还可以导致抗生素抗性微生物和抗生素抗性基因在物种和栖息地之间的传播。微生物群的协同进化也可能发生在人类和动物中,这可能会通过动物食物消费改变人类微生物组的结构。一种健康是一种整体方法,可以系统地了解人类之间的复杂关系,动物和环境可以为解决上述食品安全问题提供有效的对策。本文描述了牲畜和动物产品的主要病原体谱,总结了抗生素抗性细菌和基因在人类和牲畜之间沿着食物链生产的流动,并对其微生物组的相关性进行了审查,以倡导医学研究人员之间更深入的跨学科交流和合作,流行病学,兽医学和生态学促进“一个健康”方法,以应对全球食品安全挑战。
    The food safety of livestock is a critical issue between animals and humans due to their complex interactions. Pathogens have the potential to spread at every stage of the animal food handling process, including breeding, processing, packaging, storage, transportation, marketing and consumption. In addition, application of the antibiotic usage in domestic animals is a controversial issue because, while they can combat food-borne zoonotic pathogens and promote animal growth and productivity, they can also lead to the transmission of antibiotic-resistant microorganisms and antibiotic-resistant genes across species and habitats. Coevolution of microbiomes may occur in humans and animals as well which may alter the structure of the human microbiome through animal food consumption. One Health is a holistic approach to systematically understand the complex relationships among humans, animals and environments which may provide effective countermeasures to solve food safety problems aforementioned. This paper depicts the main pathogen spectrum of livestock and animal products, summarizes the flow of antibiotic-resistant bacteria and genes between humans and livestock along the food-chain production, and the correlation of their microbiome is reviewed as well to advocate for deeper interdisciplinary communication and collaboration among researchers in medicine, epidemiology, veterinary medicine and ecology to promote One Health approaches to address the global food safety challenges.
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  • 文章类型: Journal Article
    脊椎盘炎是一种严重的脊柱感染,需要有效的抗生素治疗。因此,我们试图分析脊柱椎间盘炎患者术中标本中的病原体,并需要手术。为此,我们对2020年1月至2022年12月间入住我院的所有脊柱盘炎患者进行了回顾性研究.共发现114例脊椎盘炎。共检测到120种不同的病原体。总的来说,76.7%的微生物为革兰阳性菌。最常见的病原体是金黄色葡萄球菌(n=32;26.6%),其次是凝固酶阴性葡萄球菌(n=28;23.4%),其中表皮葡萄球菌(n=18;15%)是最常见的检测,以及肠球菌(n=10;8.4%)和链球菌。(n=11;9.2%)。此外,19.1%(n=22)和3.4%(n=4)的所有检测分离物是革兰氏阴性病原体或真菌,分别。总的来说,所有凝固酶阴性葡萄球菌中有42.8%对苯唑西林耐药,而没有万古霉素耐药。总之,50%的病原体可被鉴定为葡萄球菌。我们的研究结果强调了耐苯唑西林革兰氏阳性菌作为脊柱盘炎的病因的重要负担,为抗菌药物管理计划提供相关发现。
    Spondylodiscitis is a severe spinal infection that requires an effective antibiotic treatment. Therefore, we sought to analyse the causative pathogens from intraoperative specimen in patients with spondylodiscitis and a need for surgery. To this end, we performed a retrospective study of all patients with spondylodiscitis and a need for operative treatment admitted to our hospital between January 2020 and December 2022. A total of 114 cases with spondylodiscitis were identified. A total of 120 different pathogens were detected. Overall, 76.7% of those microorganisms were Gram-positive bacteria. The most common causative pathogen was Staphylococcus aureus (n = 32; 26.6%), followed by coagulase-negative staphylococci (n = 28; 23.4%), of which Staphylococcus epidermidis (n = 18; 15%) was the most frequently detected, as well as enterococci (n = 10; 8.4%) and Streptococcus spp. (n = 11; 9.2%). Moreover, 19.1% (n = 22) and 3.4% (n = 4) of all detected isolates were Gram-negative pathogens or fungi, respectively. Overall, 42.8% of all coagulase-negative staphylococci were oxacillin-resistant, while none of them were vancomycin-resistant. In summary, 50% of the pathogens could be identified as staphylococci. The results of our study highlight the important burden of oxacillin-resistant Gram-positive bacteria as an aetiological cause of spondylodiscitis, providing a relevant finding for antimicrobial stewardship programmes.
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  • 文章类型: Journal Article
    气体囊泡(GV)就像由内部气体和蛋白质壳组成的中空纳米颗粒,主要由附着在表面的疏水性气体囊泡蛋白A(GvpA)和GvpC组成。GV,首先在蓝细菌中发现,主要由光合细菌(PSB)和嗜盐古细菌产生。经过修改和设计,GV可以用作造影剂,送货承运人,和预防疾病的免疫增强剂,诊断,由于它们的尺寸很小,治疗效果很好,稳定性强、无毒等优点。目前正在开发许多基于GV的诊断和治疗方法。在这次审查中,我们讨论来源,函数,GV的物理和化学性质,关注当前GV的应用进展,提出了未来GV可能的应用前景和发展方向。
    The gas vesicle (GV) is like a hollow nanoparticle consisting of an internal gas and a protein shell, which mainly consists of hydrophobic gas vesicle protein A (GvpA) and GvpC attached to the surface. GVs, first discovered in cyanobacteria, are mainly produced by photosynthetic bacteria (PSB) and halophilic archaea. After being modified and engineered, GVs can be utilized as contrast agents, delivery carriers, and immunological boosters for disease prevention, diagnosis, and treatment with good results due to their tiny size, strong stability and non-toxicity advantages. Many diagnostic and therapeutic approaches based on GV are currently under development. In this review, we discuss the source, function, physical and chemical properties of GV, focus on the current application progress of GV, and put forward the possible application prospect and development direction of GV in the future.
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  • 文章类型: Journal Article
    这种长寿的预期寿命间接导致慢性疾病如牙周炎的数量增加,根尖周炎(AP),和糖尿病(DM)在老龄化社会,从而影响人们的生活质量。牙周炎/AP与DM之间存在双向相互作用关系。虽然1型和2型糖尿病(T1DM,T2DM)有不同的病因,血糖控制可能会影响感染,牙周炎和AP的炎症和组织愈合。非手术牙周治疗可能影响T2DM患者的血糖控制,如HbA1c水平降低所示。然而,牙周治疗对T1DM患者血糖控制的影响以及根管治疗/根尖手术对T1DM和T2DM患者的影响有待研究。DM可能通过改变口腔微生物群影响牙周组织和根尖周组织,中性粒细胞活性和宿主免疫反应和细胞因子产生的损害,诱导氧化应激等。虽然牙周炎相关的全身性炎症和高脂血症被认为有助于T2DM的控制,需要更复杂的研究来阐明详细的机制。因此,综述了DM(T1DM和T2DM)与牙周炎和AP之间的相互作用,为后续牙髓/牙周病和糖尿病患者的治疗提供依据。这些患者的管理需要医疗和牙科治疗的双管齐下,重点是血糖控制和改善口腔卫生和牙周维护护理,以确保最佳的治疗效果。
    This longevity of life expectancy has indirectly led to an increase in the number of chronic diseases such as periodontitis, apical periodontitis (AP), and diabetes mellitus (DM) in the aging society, thus affecting people\'s quality of life. There is an interaction between periodontitis/AP and DM with a two-way relationship. Although type 1 and 2 diabetes (T1DM, T2DM) have different etiologies, glycemic control may affect the infection, inflammation and tissue healing of periodontitis and AP. Non-surgical periodontal treatment may influence the glycemic control as shown by decrease of HbA1c level in T2DM patient. However, the effect of periodontal treatment on glycemic control in T1DM and root canal treatment/apical surgery on T1DM and T2DM patients awaits investigation. DM may affect the periodontal and periapical tissues possibly via altered oral microbiota, impairment of neutrophils\' activity and host immune responses and cytokine production, induction of oxidative stress etc. While periodontitis associated systemic inflammation and hyperlipidemia is suggested to contribute to the control of T2DM, more intricate studies are necessary to clarify the detailed mechanisms. The interactions between DM (T1DM and T2DM) and periodontitis and AP are therefore reviewed to provide a basis for the treatment of subsequent patients with pulpal/periodontal disease and diabetes. A two-pronged approach of medical and dental treatment is needed for the management of these patients, with emphasis on blood glucose control and improving oral hygiene and periodontal maintenance care, to ensure the best treatment outcome.
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  • 文章类型: Journal Article
    农业生产力的一个关键决定因素是生物胁迫。此外,向不断增长的世界人口提供优质食品极大地提高了粮食需求。因此,提高农作物生产力是减轻这些担忧的唯一选择。它最终要求经常不分青红皂白地使用化学肥料等合成农用化学品,杀虫剂,杀虫剂,除草剂,等。用于管理各种生物胁迫,包括各种植物病原体。然而,由于使用这种有害的农用化学品及其副产品,食物链和生物圈受到严重影响。因此,它需要一个小时来寻找小说,作物生物胁迫管理的有效和生态方法。特别是,在植物病害管理中,正在努力利用新出现的科学,即纳米技术来创造无机纳米粒子(NPs),如金属,氧化物,硫化物,等。通过不同的途径及其在植物病害管理中的应用。其中,使用环保方法合成的绿色纳米材料和据报道具有独特性能的材料(如高表面积,可调的大小和形状,和特定的功能)使它们成为有针对性的疾病控制的理想候选者。纳米技术可以通过管理土壤中的特定疾病来阻止作物损失,植物,和水培系统。这篇综述主要集中在生物产生的绿色NPs在治疗由细菌引起的植物病害中的应用。病毒,和真菌。在创建智能靶向农药和生物分子控制递送系统中利用NPs的绿色合成,因为疾病管理被认为是环境友好的,因为它追求的是危害较小的,可持续,和环保方法。
    A crucial determining factor in agricultural productivity is biotic stress. In addition, supply of quality food to the ever-increasing world\'s population has raised the food demand tremendously. Therefore, enhanced agricultural crop productivity is the only option to mitigate these concerns. It ultimately demanded the often and indiscriminate use of synthetic agrochemicals such as chemical fertilizers, pesticides, insecticides, herbicides, etc. for the management of various biotic stresses including a variety of plant pathogens. However, the food chain and biosphere are severely impacted due to the use of such harmful agrochemicals and their byproducts. Hence, it is need of hour to search for novel, effective and ecofriendly approaches for the management of biotic stresses in crop plants. Particularly, in plant disease management, efforts are being made to take advantage of newly emerged science i.e. nanotechnology for the creation of inorganic nanoparticles (NPs) such as metallic, oxide, sulphide, etc. through different routes and their application in plant disease management. Among these, green nanomaterials which are synthesized using environmentally friendly methods and materials reported to possess unique properties (such as high surface area, adjustable size and shape, and specific functionalities) making them ideal candidates for targeted disease control. Nanotechnology can stop crop losses by managing specific diseases from soil, plants, and hydroponic systems. This review mainly focuses on the application of biologically produced green NPs in the treatment of plant diseases caused due to bacteria, viruses, and fungi. The utilization of green synthesis of NPs in the creation of intelligent targeted pesticide and biomolecule control delivery systems, for disease management is considered environmentally friendly due to its pursuit of less hazardous, sustainable, and environmentally friendly methods.
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  • 文章类型: Journal Article
    由于核能的开发和利用,核废物的安全处置需要紧急解决。近年来,利用微生物吸附能力处理放射性废物日益受到重视。与常规处置方法相比,微生物吸附具有高效的特点,低成本,无二次污染。从长远来看,微生物生物质显示出作为特异性化学结合剂的巨大前景。生物吸附条件的优化,稀土元素结合位点的鉴定,对固定化细胞的吸附能力的研究为从溶液中去除重金属的工业应用考虑生物吸附提供了令人信服的理由。然而,微生物与放射性核素的相互作用机制十分复杂。这篇小型综述简要概述了制备方法,影响吸附能力的因素,以及微生物吸附剂的作用机理。
    Due to the development and utilization of nuclear energy, the safe disposal of nuclear waste needs to be urgently addressed. In recent years, the utilization of microorganisms\' adsorption capacity to dispose of radioactive waste has received increasing attention. When compared with conventional disposal methods, microbial adsorption exhibits the characteristics of high efficiency, low cost, and no secondary pollution. In the long term, microbial biomass shows significant promise as specific chemical-binding agents. Optimization of biosorption conditions, identification of rare earth element binding sites, and studies on the sorption capacities of immobilized cells provide compelling reasons to consider biosorption for industrial applications in heavy metal removal from solutions. However, the interaction mechanism between microorganisms and radioactive nuclides is very complex. This mini-review briefly provides an overview of the preparation methods, factors affecting the adsorption capacity, and the mechanisms of microbial adsorbents.
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  • 文章类型: Journal Article
    磷(P)和铁(Fe)是植物生长必需的两种矿质养分。广泛观察到磷和铁的相互作用会影响它们在土壤中的有效性,并影响它们在植物中的稳态。近年来受到了极大的关注。这篇综述总结了土壤特性激活不溶性Fe-P络合物的最新进展,微生物,和植物。此外,我们阐明了植物如何适应Fe-P相互作用的生理和分子机制。这篇综述还讨论了当前的局限性,并提出了通过优化作物中磷和铁的利用效率来促进可持续农业的潜在途径。
    Phosphorus (P) and iron (Fe) are two essential mineral nutrients in plant growth. It is widely observed that interactions of P and Fe could influence their availability in soils and affect their homeostasis in plants, which has received significant attention in recent years. This review presents a summary of latest advances in the activation of insoluble Fe-P complexes by soil properties, microorganisms, and plants. Furthermore, we elucidate the physiological and molecular mechanisms underlying how plants adapt to Fe-P interactions. This review also discusses the current limitations and presents potential avenues for promoting sustainable agriculture through the optimization of P and Fe utilization efficiency in crops.
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