cytogenetic analysis

细胞遗传学分析
  • 文章类型: Journal Article
    当在妊娠前三个月对胎儿进行超声检查时观察到颈部半透明性增加(>3.00mm),考虑到染色体病的风险增加,孕妇被提供了进行侵入性调查的可能性。这里,我们将注意力集中在具有细胞遗传学平衡的相互易位的胎儿的产前诊断问题上。我们报告了一个细胞遗传学平衡的发现,事实上的基因组不平衡易位,在产前诊断的情况下构成了挑战,在Zellweger综合征谱风险中改变唐氏综合征的风险(PEX3缺失)。在学期,一个健康的婴儿出生了。该案例表明,在胎儿染色体异常风险增加的情况下,产前诊断除形态核型外,还必须进行分子研究。
    When an increased nuchal translucency (>3.00 mm) is observed during the echographic examination of a foetus in the first trimester of pregnancy, an increased risk of chromosomopathy is considered, and the pregnant woman is offered the possibility of an invasive investigation. Here, we focused our attention on prenatal diagnosis issues in cases of foetuses with cytogenetically balanced reciprocal translocations. We report the finding of a cytogenetically balanced, de facto genomically unbalanced translocation that poses a challenge in a case of prenatal diagnosis, changing the risk of Down syndrome in a Zellweger syndromic spectrum risk (PEX3 deletion). At term, a healthy baby was born. This case teaches that prenatal diagnosis in cases of foetuses at increased risk of chromosomal abnormality imperatively requires molecular investigation in addition to a morphological karyotype.
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  • 文章类型: Journal Article
    Rhinella属对应于一组以众多分类学和系统性挑战为特征的无尾菌,导致他们组织成物种复合体。迄今为止,该属的细胞遗传学数据仅限于二倍体数量和染色体形态,在物种中保持高度保守。在这项研究中,我们分析了三种莱茵属(Rhinellagranulosa,Rhinellamargaritifera,和Rhinellamarina)使用经典(常规染色和C带)和分子(与18SrDNA的FISH荧光原位杂交,端粒序列,和微卫星探针)细胞遗传学方法。这项研究的目的是提供可以揭示重复序列分布变化的数据,这些重复序列有助于理解这些物种的核型多样化。结果揭示了整个物种的保守核型,2n=22,FN=44,具有亚中心和亚中心染色体。C带显示所有物种在着丝粒区域的异色块,在R.marina中的对3和6的长臂上以及在r.margaritifera中的对4和6的短臂上有一个近端块。此外,18SrDNA探针与颗粒R.中的5对杂交,在R.Marina配对7,在r.margaritifera配对10。端粒序列探针仅在染色体的远端区域显示信号,而微卫星DNA探针显示出物种特异性模式。这些发现表明,尽管具有保守的核型宏观结构,由于重复序列的积累,物种之间存在染色体差异。这种变异可能归因于这些序列的染色体重排或差异积累,强调重复序列在莱茵属物种染色体进化中的动态作用。最终,这项研究强调了重复DNA在染色体重排中的作用的重要性,以阐明导致Rhinella不同系统发育群体独立多样化的进化机制.
    The genus Rhinella corresponds to a group of anurans characterized by numerous taxonomic and systemic challenges, leading to their organization into species complexes. Cytogenetic data for this genus thus far are limited to the diploid number and chromosome morphology, which remain highly conserved among the species. In this study, we analyse the karyotypes of three species of the genus Rhinella (Rhinella granulosa, Rhinella margaritifera, and Rhinella marina) using both classical (conventional staining and C-banding) and molecular (FISH-fluorescence in situ hybridization with 18S rDNA, telomeric sequences, and microsatellite probes) cytogenetic approaches. The aim of this study is to provide data that can reveal variations in the distribution of repetitive sequences that can contribute to understanding karyotypic diversification in these species. The results revealed a conserved karyotype across the species, with 2n = 22 and FN = 44, with metacentric and submetacentric chromosomes. C-banding revealed heterochromatic blocks in the pericentromeric region for all species, with a proximal block on the long arms of pairs 3 and 6 in R. marina and on the short arms of pairs 4 and 6 in R. margaritifera. Additionally, 18S rDNA probes hybridized to pair 5 in R. granulosa, to pair 7 in R. marina, and to pair 10 in R. margaritifera. Telomeric sequence probes displayed signals exclusively in the distal region of the chromosomes, while microsatellite DNA probes showed species-specific patterns. These findings indicate that despite a conserved karyotypical macrostructure, chromosomal differences exist among the species due to the accumulation of repetitive sequences. This variation may be attributed to chromosome rearrangements or differential accumulation of these sequences, highlighting the dynamic role of repetitive sequences in the chromosomal evolution of Rhinella species. Ultimately, this study emphasizes the importance of the role of repetitive DNAs in chromosomal rearrangements to elucidate the evolutionary mechanisms leading to independent diversification in the distinct phylogenetic groups of Rhinella.
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  • 文章类型: Editorial
    暂无摘要。
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  • 文章类型: Journal Article
    山羊被认为是在伊拉克库尔德斯坦地区农业部门发挥重要作用的主要农场动物。尚未对其进行细胞学检查。本实验旨在确定本地种山羊的核型。本实验是在核型上进行的,并准备了Meriz山羊的表意图。通过核型的产生,可以确定品种中染色体的相对长度和着丝粒指数臂比。总共(30)只Meriz山羊,由(10)男性和(20)女性组成,选择收集血液样本进行短期淋巴细胞培养。观察到二倍体染色体计数为(60),由(29)对顶心常染色体和一对同种异体体组成,特别是X和Y染色体。通过科学研究确定了X染色体的近核性质和Y染色体的亚中心性质。该研究观察到Meriz山羊常染色体相对长度的变化,女性从4.49%到1.89%,男性从(4.53%)到(1.75%)。女性X染色体的相对长度为3.96,而Y染色体显示的相对长度为(5.05)。这项核学研究的结果表明,在接受检查的Meriz山羊中看到的染色体组成在正常状态的预期范围内。建议在种群水平上进行更多的细胞遗传学分析,以鉴定Meriz品种种群中具有数字和/或结构染色体异常的个体。这项研究对于提高该品种的生产和繁殖效率至关重要。
    Goats are considered the leading farm animal that has a substantial role in the agricultural sector in the Kurdistan Region of Iraq. No cytological examination has been carried out on them. This experiment aims to identify the Karyotype of the local breeds of domestic goats. This experiment was conducted on the Karyotype and prepared the ideogram of Meriz goats. The determination of the relative length and centromeric index arm ratio of the chromosomes in the breed was achieved by the production of karyotypes. A total of (30)Meriz goats, consisting of (10) males and (20) females, were selected to collect blood samples for a short-term lymphocyte culture. The diploid chromosome count was observed to be (60), consisting of (29) pairs of acrocentric autosomes and one pair of allosomes, specifically the X and Y chromosomes. The acrocentric nature of the X-chromosome and the sub-metacentric nature of the Y-chromosome were identified through scientific investigation. The study observed a variation in the relative length of autosomal chromosomes in Meriz goats, with females ranging from 4.49% to 1.89% and males ranging from (4.53%) to (1.75%). The X-chromosome had a relative length of 3.96 in females, while the Y-chromosome displayed a relative length of (5.05). The findings of this karyological investigation suggest that the chromosomal composition seen in the Meriz goats under examination was within the expected range of normalcy. It is recommended that more cytogenetic analyses be conducted at the population level in order to identify individuals within the Meriz breed population who possesses numerical and/or structural chromosome abnormalities. This research is crucial for enhancing the efficiency of production and reproduction in this breed.
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  • 文章类型: Journal Article
    内皮细胞(ECs)维持血管张力和屏障完整性,调节血液稳态,在正常生理条件下防止白细胞外渗。由于寿命有限,并且在主要EC的遗传组成方面存在批次差异,已建立的不朽EC系广泛用于研究内皮生物学。为了解决这个问题,永生内皮细胞系EA。hy926是通过将原代人脐静脉内皮细胞(HUVECs)与人肺癌A549细胞融合而开发的。EA.hy926细胞与HUVEC具有许多相似的内皮特性,被认为是原代HUVEC的永生对应物。然而,EA的细胞遗传学完整性。hy926细胞尚未完全阐明。我们表征了EA。hy926细胞具有常规G显带和分子细胞遗传学技术,例如光谱核型分析和亚端粒荧光原位杂交。细胞遗传学分析显示了一系列数量和稳定的结构染色体重排,包括一个缺失,一次重复,一个等值染色体,七个简单的易位,和Ea中的五个复杂易位。hy926细胞。这些发现将促进对EA的理解。hy926细胞生物学和加强未来的内皮研究,特别是在HUVECs和EA之间的比较研究中。hy926细胞。
    Endothelial cells (ECs) maintain vessel tone and barrier integrity, regulate blood homeostasis, and prevent the extravasation of leukocytes under normal physiological conditions. Because of the limited lifespans and batch-to-batch differences with respect to the genetic make-up of primary ECs, established immortal EC lines are extensively used for studying endothelial biology. To address this issue, the immortal endothelial cell line EA.hy926 was developed by fusing primary human umbilical vein endothelial cells (HUVECs) with human lung carcinoma A549 cells. EA.hy926 cells share a number of similar endothelial properties with HUVECs and are considered the immortal counterpart to primary HUVECs. However, the cytogenetic integrity of EA.hy926 cells is not fully elucidated. We characterized EA.hy926 cells with conventional G-banding and molecular cytogenetic techniques such as spectral karyotyping and subtelomeric fluorescence in situ hybridization. Cytogenetic analysis revealed an array of numerical and stable structural chromosomal rearrangements including one deletion, one duplication, one isochromosome, seven simple translocations, and five complex translocations in Ea.hy926 cells. These findings will advance comprehension of EA.hy926 cell biology and augment future endothelial studies, specifically in comparison studies between HUVECs and EA.hy926 cells.
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  • 文章类型: Journal Article
    影像组学已证明在预测多发性骨髓瘤(MM)的细胞遗传学状态方面具有潜力。然而,单序列放射学列线图在预测MM高危细胞遗传学(HRC)状态中的作用仍未得到充分研究.本研究旨在开发和验证基于脂肪抑制T2加权图像(T2WI-FS)的放射组学列线图,用于预测MM的HRC状态。促进治疗前决策和预后评估。
    纳入了159名MM患者的队列,包括71例HRC和88例非HRC病例。手动描绘T2WI-FS图像上最重要的肿瘤病变内的感兴趣区域,产生1688个特征。使用10倍交叉验证选择了14个放射学特征,采用方差阈值等方法,学生t检验,冗余分析,和最小绝对收缩和选择运算符(LASSO)。利用Logistic回归建立了三种预测模型:临床模型(模型1),T2WI-FS放射学模型(模型2),和联合临床-放射学模型(模型3)。接收器工作特性(ROC)曲线评估并比较了这些模型的诊断性能。Kaplan-Meier生存分析和对数秩检验评估了放射学列线图的预后价值。
    与模型1相比,模型2和3显示出明显更大的诊断功效(p<0.05)。模型1、2和3的ROC曲线下面积如下:训练集-0.650、0.832和0.846;验证集-0.702、0.730和0.757。Kaplan-Meier生存分析显示放射学列线图和MM细胞遗传学状态之间具有可比性的预后价值,对数秩检验结果(p<0.05),一致性指数分别为0.651和0.659;z评分检验结果无统计学意义(p=0.153)。此外,Kaplan-Meier分析显示,非HRC组的患者,低RS组,年龄≤60岁,总生存期最长,而HRC组的人,高RS组,年龄>60岁的患者总生存期最短(p=0.004,Log-rank检验)。
    放射组学列线图能够预测MM中的HRC状态。细胞遗传学状态,放射学模型Rad评分,和年龄共同影响MM患者的总体生存率。这些因素可能有助于治疗前临床决策和预后评估。
    UNASSIGNED: Radiomics has demonstrated potential in predicting the cytogenetic status of multiple myeloma (MM). However, the role of single-sequence radiomic nomograms in predicting the high-risk cytogenetic (HRC) status of MM remains underexplored. This study aims to develop and validate radiomic nomograms based on fat-suppressed T2-weighted images (T2WI-FS) for predicting MM\'s HRC status, facilitating pre-treatment decision-making and prognostic assessment.
    UNASSIGNED: A cohort of 159 MM patients was included, comprising 71 HRC and 88 non-HRC cases. Regions of interest within the most significant tumor lesions on T2WI-FS images were manually delineated, yielding 1688 features. Fourteen radiomic features were selected using 10-fold cross-validation, employing methods such as variance thresholds, Student\'s t-test, redundancy analysis, and least absolute shrinkage and selection operator (LASSO). Logistic regression was utilized to develop three prediction models: a clinical model (model 1), a T2WI-FS radiomic model (model 2), and a combined clinical-radiomic model (model 3). Receiver operating characteristic (ROC) curves evaluated and compared the diagnostic performance of these models. Kaplan-Meier survival analysis and log-rank tests assessed the prognostic value of the radiomic nomograms.
    UNASSIGNED: Models 2 and 3 demonstrated significantly greater diagnostic efficacy compared to model 1 (p < 0.05). The areas under the ROC curve for models 1, 2, and 3 were as follows: training set-0.650, 0.832, and 0.846; validation set-0.702, 0.730, and 0.757, respectively. Kaplan-Meier survival analysis indicated comparable prognostic values between the radiomic nomogram and MM cytogenetic status, with log-rank test results (p < 0.05) and concordance indices of 0.651 and 0.659, respectively; z-score test results were not statistically significant (p = 0.153). Additionally, Kaplan-Meier analysis revealed that patients in the non-HRC group, low-RS group, and aged ≤ 60 years exhibited the longest overall survival, while those in the HRC group, high-RS group, and aged > 60 years demonstrated the shortest overall survival (p = 0.004, Log-rank test).
    UNASSIGNED: Radiomic nomograms are capable of predicting the HRC status in MM. The cytogenetic status, radiomics model Rad score, and age collectively influence the overall survival of MM patients. These factors potentially contribute to pre-treatment clinical decision-making and prognostic assessment.
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  • 文章类型: Journal Article
    急性淋巴细胞白血病(ALL)是儿童和成人罕见的最常见的白血病类型,而急性髓细胞性白血病(AML)在儿童中不太常见,在老年人中更常见。该研究的目的是通过使用经典和分子细胞遗传学方法来介绍我们诊断白血病的经验。这项研究是在2009年至2019年之间在路易斯·乌尔卡努儿童医院的肿瘤学系经典和分子遗传实验室进行的,提米索拉,罗马尼亚。研究组包括337名儿童和成人,2009年至2019年评估。通过使用常规和分子细胞遗传学技术,发现的细胞遗传学异常是35个数字染色体异常,10(9;22)(q34;q11)[四个,一个AML,五次慢性粒细胞白血病(CML)]易位,九(15;17)(q24;q21)易位,三(14;14)(q11;q32)易位,两个(4;11)(q21;q23)易位,一(1;14)(p32;q11)易位,一(7;14)(qter;q11)易位,一个(8;21)(q22;q22)易位,一(9;14)(p12;q32)易位,MLL基因的七个重排和核心结合因子亚基β/肌球蛋白重链11(CBFB/MYH11)基因的两个重排。使用常规和分子细胞遗传学分析是急性白血病患者最重要的预后指标之一,允许识别生物学上不同的疾病亚型并选择适当的治疗方法。
    Acute lymphoblastic leukemia (ALL) is the most common type of leukemia in childhood and rare in adults, while acute myeloid leukemia (AML) is less common in children and more common in older adults. The aim of the study was to present our experience for the diagnostic of leukemia by using the classic and molecular cytogenetic methods. The study was conducted between 2009 and 2019 within the Classic and Molecular Genetic Laboratory of the Oncohematology Department from the Louis Ţurcanu Emergency Hospital for Children, Timişoara, Romania. The study group included 337 children and adults, evaluated between 2009 and 2019. By using the conventional and molecular cytogenetic technique, the cytogenetic anomalies found were 35 numerical chromosomal abnormalities, 10 (9;22)(q34;q11) [four ALL, one AML, five chronic myeloid leukemia (CML)] translocations, nine (15;17)(q24;q21) translocations, three (14;14)(q11;q32) translocations, two (4;11)(q21;q23) translocations, one (1;14)(p32;q11) translocation, one (7;14)(qter;q11) translocation, one (8;21)(q22;q22) translocation, one (9;14)(p12;q32) translocation, seven rearrangements of the MLL gene and two rearrangements of the core-binding factor subunit beta∕myosin heavy chain 11 (CBFB∕MYH11) gene. The use of conventional and molecular cytogenetic analysis is one of the most important prognostic indicators in acute leukemia patients, allowing the identification of biologically distinct subtypes of disease and selection of appropriate treatment approaches.
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  • 文章类型: Journal Article
    背景:性发育差异(DSD)是一组异质性的先天性改变,会影响内部和/或外部的主要性别特征。虽然这些情况并不代表死亡风险,如果管理不当,他们可能会产生严重的心理情绪影响。可能导致DSD的遗传变化是多种多样的,从染色体改变到性发育网络中涉及的单碱基变异。关于DSD的流行病学研究表明,全球频率为1:4500-5500,可增加到1:200-300,包括孤立的解剖缺陷。据我们所知,这项研究首次描述了三级医院的墨西哥患者队列中DSD的流行病学和遗传特征.
    方法:描述性和回顾性横断面研究,分析了2015年至2021年在墨西哥城儿科医院就诊的DSD患者。
    结果:根据芝加哥共识声明和多学科小组定义的诊断,对诊断为DSD的100例患者进行了注册并分组为不同的实体。在总数中,其中54%属于染色体DSD分类,16%属于46,XX和30%属于46,XY分类。
    结论:染色体DSD的频率与文献一致;然而,我们发现DSD46,XY在我们的队列中更常见,这可能是由于被捕获的病人的年龄,我们研究人群的特征,或其他取决于样本量的原因。
    BACKGROUND: Differences in Sex Development (DSD) is a heterogeneous group of congenital alterations that affect inner and/or outer primary sex characters. Although these conditions do not represent a mortality risk, they can have a severe psycho-emotional impact if not appropriately managed. The genetic changes that can give rise to DSD are diverse, from chromosomal alterations to single base variants involved in the sexual development network. Epidemiological studies about DSD indicate a global frequency of 1:4500-5500, which can increase to 1:200-300, including isolated anatomical defects. To our knowledge, this study is the first to describe epidemiological and genetic features of DSD in a cohort of Mexican patients of a third-level care hospital.
    METHODS: Descriptive and retrospective cross-sectional study that analyzed DSD patients from 2015 to 2021 attended a Paediatric Hospital from Mexico City.
    RESULTS: One hundred one patients diagnosed with DSD were registered and grouped into different entities according to the Chicago consensus statement and the diagnosis defined by the multidisciplinary group. Of the total, 54% of them belong to the chromosomal DSD classification, 16% belongs to 46, XX and 30% of them belongs to the 46, XY classification.
    CONCLUSIONS: The frequency for chromosomal DSDs was consistent with the literature; however, we found that DSD 46, XY is more frequent in our cohort, which may be due to the age of the patients captured, the characteristics of our study population, or other causes that depend on the sample size.
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  • 文章类型: Journal Article
    对于广岛和长崎幸存者,目前还无法根据细胞遗传学数据计算个体剂量,并将其与物理估计剂量进行比较.这是因为细胞遗传学研究使用固体Giemsa染色,该染色仅提供至少一种稳定型畸变的细胞百分比(大多数不稳定型畸变已经消失),使用伽马射线剂量加上10倍中子剂量来整合两个城市的数据。
    在校正中子剂量的贡献后,将FISH衍生的伽马射线剂量与DS02R1衍生的伽马射线剂量进行比较。还试图确定暴露后稳定型像差的频率是否保持不变。
    使用2色FISH方法从广岛和长崎的1,868名原子弹幸存者那里获得了稳定的交换型像差数据。首先将收集的频率扩展到基因组等效频率。然后,通过使用已知的由中子和伽马射线引起的体外交换型像差的诱导率,分别,以及DS02R1估算中幸存者的中子和伽马射线剂量之间的平均关系,从易位的总产量中估计γ射线效应.
    发现超过95%的个体细胞遗传学伽马射线剂量落在DS02R1剂量的正/负约1Gy的预期范围内,线性回归的平均斜率为0.98,这确保了我们DS02R1研究的有效性。
    目前的结果证明了单个DS02R1剂量的有效性,血液淋巴细胞中稳定型畸变的频率多年来没有衰减,因此,对于在遥远的过去发生的暴露的回顾性剂量评估是有用的。
    UNASSIGNED: For Hiroshima and Nagasaki survivors, it has not been possible to calculate individual doses from the cytogenetic data and compare them with the physically estimated doses. This is because the cytogenetic studies used solid Giemsa staining which only provides the percent of cells bearing at least one stable-type aberration (most of the unstable-type aberrations had already disappeared), and a gamma-ray dose plus a 10-times neutron dose was used to integrate the data for both cities.
    UNASSIGNED: To compare the FISH-derived gamma-ray dose with the DS02R1-derived gamma-ray dose after correcting for a contribution of the neutron dose. It was also an attempt to determine if the frequency of stable-type aberrations had remained unchanged after the exposure.
    UNASSIGNED: Stable exchange-type aberration data was obtained using the 2-color FISH method from 1,868 atomic bomb survivors in Hiroshima and Nagasaki. The collected frequency was first extended to a genome-equivalent frequency. Then, by using known induction rates of exchange-type aberrations in vitro caused by neutrons and gamma-rays, respectively, and the mean relationship between the neutron and gamma-ray doses in the DS02R1 estimates for the survivors, the gamma-ray effect was estimated from the total yield of translocations.
    UNASSIGNED: It was found that over 95% of individual cytogenetic gamma-ray doses fell within the expected range of plus/minus about 1 Gy from the DS02R1 dose and the mean slope for the linear regression was 0.98, which reassures us of the validity of the DS02R1 study.
    UNASSIGNED: The present results demonstrate the validity of the individual DS02R1 doses, and that the frequency of stable-type aberrations in blood lymphocytes did not decay over the years, and thus is useful for retrospective dose evaluations of exposures which took place in the distant past.
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  • 文章类型: Journal Article
    这项工作的目的是确定摩洛哥人口中13三体的表型特征和细胞遗传学方面。对一组9例被诊断为13三体的细胞遗传学病例进行了回顾性研究。性别比研究显示,在我们组的病例中,女性占主导地位。主要临床发现包括:大前脑,小眼症和无眼,虹膜结肠瘤,唇腭裂,鼻和耳异常,逆行和倾斜的前额,多指,毛细血管瘤,脐膨出,先天性心脏病,肾脏异常,隐睾,语言延迟。细胞遗传学研究表明,游离和同质三体性13(56%)占主导地位。患有这种配方的患者在早期(不超过一个月)死亡。然而,每个染色体公式,三体性13易位和部分三体性13t(13;18),在我们20%的病人身上发现了.部分三体性13t(13;18)是唯一仍然存活的变体,患有这种异常的患者主要患有肾脏和心脏异常,伴有轻微的畸形和精神运动迟缓。我们的研究表明,细胞遗传学分析对Patau综合征患者及其父母的诊断准确性和遗传咨询感兴趣。
    The objective of this work was to identify phenotypic features and cytogenetic aspects of trisomy 13 in Moroccan population. The retrospective study was conducted on a group of 9 cases diagnosed cytogenetically with trisomy 13. The study of sex ratio showed a slight female dominance in our group of cases. The major clinical findings included: Holoprosencephaly, microphthalmia and anophthalmia, coloboma of iris, cleft lip and palate, nasal and ear abnormalities, retrognathism and sloping forehead, polydactyly, capillary hemangiomas, omphalocele, congenital heart defect, renal abnormalities, cryptorchidism, language delay. The cytogenetic study showed the dominance of the free and homogeneous trisomy 13 (56%). Patients who have this formula are dead at an early age (does not exceed one month). However, each of the chromosomal formula, trisomy 13 by translocation and partial trisomy 13 t (13;18), was found in 20% of our patients. The partial trisomy 13 t (13;18) is the only variant that is still alive and the patients with this anomaly suffer mainly from renal and cardiac anomalies with slight dysmorphia and psychomotor retardation. Our study shows the interest of the cytogenetic analysis in the diagnosis accuracy and in the genetic counseling of patients with Patau syndrome and their parents.
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