cytogenetic analysis

细胞遗传学分析
  • 文章类型: Journal Article
    根据世界卫生组织(WHO)分类系统和髓样肿瘤和急性白血病国际共识分类(ICC),髓样恶性肿瘤的精确亚分类需要对细胞遗传学和/或分子遗传学变化的存在进行调查和记录。这些辅助研究不仅有助于诊断,还有疾病的预后;然而,他们需要时间来完成。相比之下,对于怀疑有髓样恶性肿瘤的病例,血液和骨髓标本的形态学评估通常可以迅速完成。细胞形态学评估可以预测遗传变化,并有助于分类敏锐度。在急性早幼粒细胞白血病(APL)等血液学紧急情况中尤其如此。及时的APL特异性治疗可以改变生活。同样,一些形态学线索可能有助于识别核心结合因子白血病,其中急性髓性白血病(AML)的诊断可以在不达到20%blast截止值的情况下进行,并具有立即的治疗决策意义。或甚至一组具有FLT3ITD/NPM1突变的AML病例,这些突变表现出特征性特征。即使FISH/细胞遗传学和/或PCR仍然需要建立最终诊断,评估特定细胞形态学特征的存在有助于预测遗传变化,可以成为指导早期治疗的有用工具.
    Precise subclassification of myeloid malignancies per the World Health Organization (WHO) classification system and the International Consensus Classification of Myeloid Neoplasms and Acute Leukaemias (ICC) requires investigation and documentation of the presence of cytogenetic and/or molecular genetic changes. These ancillary studies not only help in diagnosis, but also the prognosis of disease; however, they take time to be completed. In contrast, morphological evaluation of material from the blood and bone marrow specimens of cases where myeloid malignancies are suspected is usually completed quickly. Cytomorphological assessment may predict genetic changes and can be helpful in triaging acuity. This is especially true in haematological emergencies such as acute promyelocytic leukaemia (APL), where prompt APL-specific therapy can be life changing. Similarly, some morphological clues may help identify core binding factor leukaemias where a diagnosis of acute myeloid leukaemia (AML) could be rendered without reaching the 20% blast cutoff with immediate treatment-decision implications, or even a subset of cases of AML with FLT3 ITD/NPM1 mutation(s) which show characteristic features. Even though FISH/cytogenetics and/or PCR are still required for establishing the final diagnosis, evaluation for the presence of specific cytomorphological features that help predict genetic changes can be a useful tool to help guide early therapy.
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  • 文章类型: Review
    迄今为止,仅报告了21例出生后诊断为马赛克三体性12的病例。最常见的表型表现是发育迟缓,畸形面部特征,先天性心脏缺陷,数字改动,和色素性疾病。在本报告中,本文描述了3例无亲缘关系的新出现的镶嵌三体性12患者的详细临床和基因概况,并与以前报道的病例进行了比较.
    在本报告中,我们包括临床,细胞遗传学,和三名墨西哥患者的分子描述出生后诊断为镶嵌三体12。在表型水平,三名患者出现发育迟缓,畸形面部特征,先天性心脏缺陷和皮肤色素异常。特别是,患者1表现出独特的眼部改变为双侧扩张症,三排上睫毛,和数字异常。在患者2多余的皮肤中,严重的听力损失,并观察到低张力,3例患者表现为过度远调和远视。具有播散性色素异常的色素沉着过度是所有这些中的共同特征。细胞遗传学研究是在严格的分析标准下进行的,从三个不同的组织中筛选50-100个中期,在所分析的三种不同组织中的至少一种中显示出12三体镶嵌性。有了SNParray,先前未被细胞遗传学检测到的低水平马赛克拷贝数变异的存在,排除了12号染色体的单亲染色体。STR标记允许确认不存在单亲二倍体,并知道多余染色体12的亲本起源。
    详细的临床,细胞遗传学,以及这三个新患者的分子描述,有助于相关信息更准确地描绘一组表现出异质性表型的患者,虽然共享相同的染色体改变。检测镶嵌三体性12的可能性与用于揭示低水平染色体镶嵌性的方法的灵敏度直接相关。以及在合适的组织中进行分析的可能性。
    To date, only twenty-one cases diagnosed postnatally with mosaic trisomy 12 have been reported. The most frequent phenotypic manifestations are developmental delay, dysmorphic facial features, congenital heart defects, digital alterations, and pigmentary disorders. In the present report, detailed clinical and genetic profiles of three unrelated new patients with mosaic trisomy 12 are described and compared with previously reported cases.
    In the present report, we include the clinical, cytogenetic, and molecular description of three Mexican patients diagnosed postnatally with mosaic trisomy 12. At phenotypic level, the three patients present with developmental delay, dysmorphic facial features, congenital heart defects and skin pigmentary anomalies. Particularly, patient 1 showed unique eye alterations as bilateral distichiasis, triple rows of upper lashes, and digital abnormalities. In patient 2 redundant skin, severe hearing loss, and hypotonia were observed, and patient 3 presented with hypertelorism and telecanthus. Hyperpigmentation with disseminated pigmentary anomalies is a common trait in all of them. The cytogenetic study was carried out under the strict criteria of analysis, screening 50-100 metaphases from three different tissues, showing trisomy 12 mosaicism in at least one of the three different tissues analyzed. With SNParray, the presence of low-level mosaic copy number variants not previously detected by cytogenetics, and uniparental disomy of chromosome 12, was excluded. STR markers allowed to confirm the absence of uniparental disomy as well as to know the parental origin of supernumerary chromosome 12.
    The detailed clinical, cytogenetic, and molecular description of these three new patients, contributes with relevant information to delineate more accurately a group of patients that show a heterogeneous phenotype, although sharing the same chromosomal alteration. The possibility of detecting mosaic trisomy 12 is directly associated with the sensitivity of the methodology applied to reveal the low-level chromosomal mosaicism, as well as with the possibility to perform the analysis in a suitable tissue.
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  • 文章类型: Journal Article
    这项系统评价和荟萃分析的目的是评估儿童暴露于环境空气污染物与微核(MN)频率之间的关系。这项工作是根据Cochrane协作和PRISMA指南和建议进行的。2021年11月之前发布的文章通过PubMed/MEDLINE上的高级搜索确定,Scopus和WebofScience数据库。使用特定工具进行了严格的评估,以评估每个纳入研究的质量。所有分析均使用ReviewManager(RevMan)5.4软件(CochraneCollaboration,伦敦,英国)。首先确定了一百四十五个参考文献,and,在选择过程结束时,13项研究符合纳入标准。六项研究通过使用空气采样器进行了直接评估,而其他访问环境数据库(n=2)或使用其他工具(n=3)。在两种情况下,暴露没有直接调查,儿童在两个不同的地区取样,众所周知,污染程度不同。总效应大小(ES)为1.57((95%CI=1.39;1.78),p值<0.00001)(总评估对象:4162),强调了室外空气污染与儿童MN频率之间的统计显着关联。由于高MN频率与许多病理状态和发展为慢性退行性疾病的高风险相关,政策制定者应考虑我们的结果,以设计和实施旨在减少大气中污染物的引入并尽量减少暴露程度的干预措施,特别是在儿童中。
    The aim of this systematic review and meta-analysis was to assess the association between exposure to ambient air pollutants and micronuclei (MN) frequency in children. This work was performed according to the Cochrane Collaboration and the PRISMA guidelines and recommendations. Articles published before November 2021 were identified by an advanced search on PubMed/MEDLINE, Scopus and Web of Science databases. A critical appraisal using a specific tool was conducted to assess the quality of each included study. All analyses were carried out by using the Review Manager (RevMan) 5.4 software (The Cochrane Collaboration, London, UK). One hundred and forty-five references were firstly identified, and, at the end of selection process, 13 studies met the inclusion criteria. Six studies carried out a direct evaluation through the use of air samplers, whereas the other ones accessed environmental databases (n = 2) or used other tools (n = 3). In two cases, exposure was not directly investigated, with children sampled in two different areas with well-known different levels of pollution. The overall effect size (ES) was 1.57 ((95% CI = 1.39; 1.78), p-value < 0.00001) (total evaluated subjects: 4162), which highlighted a statistically significant association between outdoor air pollution and MN frequency in children. As a high MN frequency has been associated with a number of pathological states and a higher risk of developing chronic degenerative diseases, our results should be taken into consideration by policy makers to design and implement interventions aimed at reducing the introduction of pollutants in the atmosphere as well as at minimizing the exposure extent, particularly in children.
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  • 文章类型: Case Reports
    目的:染色体16p11.2缺失已被认为是一种具有良好描述的出生后表型的遗传性疾病。然而,由于缺乏足够的证据,产前表现不典型。
    方法:由于产前诊断的各种指征:产前超声异常(例1、例2、例4)和脑瘫患儿生育史(例3),4例孕妇行羊膜腔穿刺术进行细胞遗传学分析和染色体微阵列分析(CMA)。在病例1、2和4中未观察到重叠的表型,这可能表明16p11.2微缺失的产前表型的表型多样性。所有四个胎儿均显示正常的核型结果,而CMA鉴定出16p11.2的0.303-0.916Mb微缺失,分别包含BP2-BP3和BP4-BP5区域。根据父母的CMA验证,病例1在Xp22.33区域携带母体遗传复制,在Xp21.1区域携带从头缺失。所有父母都根据遗传咨询选择终止怀孕。
    结论:我们的发现丰富了16p11.2微缺失的宫内表型特征,这将有利于临床遗传咨询。此外,如果这类携带者打算再次受孕,那么植入前基因检测被认为是一种一线方法.
    OBJECTIVE: Chromosome 16p11.2 deletions have been recognized as a genetic disorder with well-described postnatal phenotypes. However, the prenatal manifestations are atypical for lacking of enough evidence.
    METHODS: Four pregnant women underwent amniocentesis for cytogenetic analysis and chromosomal microarray analysis (CMA) because of various indications for prenatal diagnosis: prenatal ultrasound abnormalities (cases 1, 2 and 4) and the childbearing history of cerebral palsy child (case 3). No overlapping phenotypes were observed in cases 1, 2 and 4, which might indicate phenotypic diversities in prenatal phenotypes for 16p11.2 microdeletion. All four fetuses showed normal karyotypic results while CMA identified 0.303-0.916 Mb microdeletions of 16p11.2, encompassing BP2-BP3 and BP4-BP5 regions separately. According to the parental CMA verification, case 1 carried a maternal inherited duplication in the region of Xp22.33 and a de novo deletion in the region of Xp21.1. All parents opted for the termination of pregnancies based upon genetic counselling.
    CONCLUSIONS: Our findings enriched the intrauterine phenotypic features of 16p11.2 microdeletions, which would be beneficial for genetic counselling in clinic. In addition, preimplantation genetic testing was recognized as a first-tier approach for such carriers if they intended to conceive again.
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  • 文章类型: Journal Article
    目标:Barleria,刺槐科的一个大属,由300多个物种组成,具有不同的分类学,细胞遗传学,植物化学和药理潜力。因此,这篇综述的目的是对Barleria的研究进行批判性评估,并为未来的研究提供指导.
    方法:数据来自不同来源,比如书,theses,期刊和一些网站和基于互联网的搜索,1901年至2020年出版。从PubMed获得的数据,谷歌学者,ScienceDirect,在线电子期刊,SpringerLink,威利,等。也被使用过。
    结果:该属的物种表现出相当大的药用特性。细胞遗传学数据很少,只有24个物种的染色体计数可用。最常见的染色体数为2n=2x=40。到目前为止,从Barleria物种报告了187种化合物。积极的原则,其用途,毒性和药理作用进行了讨论。精油,黄酮,黄酮类化合物,糖苷,萜烯和萜类化合物形成主要化合物。
    结论:强烈建议利用Barleria物种的药理和经济潜力,并对其利用和保护进行更详细的研究和关注。此外,确保最大的药理益处和可持续使用,有必要有经验信息来解释其民族植物学价值以及商业潜力。
    OBJECTIVE: Barleria, a large genus of the Acanthaceae family, comprises more than 300 species with diverse taxonomy, cytogenetics, phytochemistry and pharmacological potential. Therefore, the aim of this review is to critically assess the research on Barleria and provide guidance for future investigations.
    METHODS: The data were obtained from different sources, such as books, theses, journals and some of the websites and internet-based searches, published from 1901 to 2020. Data obtained from PubMed, Google Scholar, ScienceDirect, online electronic journals, SpringerLink, Wiley, etc. have also been used.
    RESULTS: The species of this genus exhibit considerable medicinal properties. Cytogenetical data are scantily available with chromosome counts available for only 24 species. The most common chromosome number is 2n = 2x = 40. So far, 187 compounds are reported from Barleria species. The active principles, their uses, toxicity and pharmacological effects are discussed. Essential oils, flavones, flavonoids, glycosides, terpenes and terpenoids form the major compounds.
    CONCLUSIONS: It is highly recommended that the pharmacological and economic potential of Barleria species should be exploited and more detailed studies and attention be geared towards its utilization and conservation. In addition, to ensure maximum pharmacological benefits and sustainable use, it is necessary to have empirical information explaining its ethnobotanical values as well as commercial potential.
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  • 文章类型: Case Reports
    目的:我们报告了一例产前男性胎儿2q13缺失和Xq27.3q28重复,超声检查显示鼻骨发育不良。并且我们比较了由相似的2q缺失和Xq重复组成的病例的临床特征的相似性。
    方法:一名30岁女性在妊娠24周时被转诊进行产前诊断和遗传咨询。产前超声显示胎儿鼻骨发育不良。羊膜穿刺术显示胎儿的核型为46,XY,染色体微阵列分析结果为arr[GRCh37]2q13(110467258-111370025)x1,arr[GRCh37]Xq27.3q28(144050780-149748782)x2。父母都有正常的核型。这对夫妇选择继续怀孕,并最终在怀孕39周时分娩了一名男婴。他的体重为2850克,身长为50厘米。新生儿的体格检查没有明显的异常。直到男孩一岁,他的生长发育没有异常。对健康婴儿进行长期随访直至成年是必要的。
    结论:CMA的发展在未发现的染色体异常的产前诊断和遗传咨询中起着至关重要的作用。更多的临床信息和对这些异常患者的进一步研究将确定涉及基因的致病性,并提高对表型-基因型相关性的理解。
    OBJECTIVE: We report a prenatal case of male fetus with a 2q13 deletion and an Xq27.3q28 duplication, presenting nasal bone dysplasia by ultrasound examination. And we compare the similarities of clinical features of cases consisting of similar 2q deletion and Xq duplication.
    METHODS: A 30-year-old woman was referred for prenatal diagnosis and genetic counseling at 24 weeks of gestation. Prenatal ultrasound showed nasal bone dysplasia of the fetus. Amniocentesis revealed the karyotype of the fetus as 46, XY and the results of chromosomal microarray analysis was arr[GRCh37] 2q13(110467258-111370025)x1, arr[GRCh37]Xq27.3q28(144050780-149748782)x2. The parents both have normal karyotypes. The couple chose to continue the pregnancy and finally delivered a male infant at 39 weeks of gestation. His weight was 2850 g and length was 50 cm. Physical examination of the newborn revealed no apparent anomalies. Until the boy was one year old, there was no abnormalities in his growth and development. The long-term follow-up till adulthood for the healthy infant is necessary.
    CONCLUSIONS: The development of CMA plays a critical role in prenatal diagnosis and genetic counseling for unidentified chromosomal anomalies. More clinical information and further studies of patients with these anomalies will identify the pathogenicity of the involving genes and improve the understanding of the phenotype-genotype correlation.
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  • 文章类型: Case Reports
    目的:9p四体是一种罕见的胎儿疾病。案件通常是马赛克。这里,我们提出了一个非马赛克四体9p病例,并进行了细胞遗传学分析,荧光原位杂交,微阵列数据,超声检查结果,和表型呈现。
    方法:由于妊娠13周时的产前超声检查中颈部透明层增加,因此将妊娠称为细胞遗传学分析。产前实验室分析显示,具有非镶嵌模式的额外标记染色体。超声检查结果为单侧唇腭裂,小颌畸形,和房室间隔缺损在第17周;此外,脑室肿大,胎儿心脏的左轴偏差,在第23周确定了单脐动脉。
    结论:非镶嵌型四体9p的表型严重程度因染色体含量而异。我们建议对那些怀疑为9p四体的孕妇进行适当的基因测试,评估马赛克状态,并对这些病例进行详细的超声检查。
    OBJECTIVE: Tetrasomy 9p is a rare fetal condition. Cases are usually mosaic. Here, we present a non-mosaic tetrasomy 9p case with cytogenetic analysis, fluorescence in situ hybridization, microarray data, ultrasound findings, and phenotypic presentation.
    METHODS: A pregnancy was referred to cytogenetic analysis because of increased nuchal translucency in prenatal ultrasound at 13 weeks of gestation. Prenatal laboratory analysis revealed an extra marker chromosome with a non-mosaic pattern. Ultrasonographic findings were unilateral cleft lip and palate, micrognathia, and atrioventricular septal defect at the 17th week; additionally, ventriculomegaly, left axis deviation of the fetal heart, and a single umbilical artery were determined at the 23rd week.
    CONCLUSIONS: Phenotypic severity in non-mosaic tetrasomy 9p widely differs depending on the chromosomal content. We recommend performing appropriate genetic tests in those pregnancies with the suspicion of tetrasomy 9p, evaluating the mosaic state, and following those cases with detailed ultrasonographic examinations.
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  • 文章类型: Journal Article
    BACKGROUND: Multiple myeloma (MM) remains an incurable disease with a median overall survival of approximately 5 years. Gain or amplification of 1q21 (1q21+) occurs in around 40% of patients with MM and generally portends a poor prognosis. Patients with MM who harbor 1q21+ are at increased risk of drug resistance, disease progression, and death. New pharmacotherapies with novel modes of action are required to overcome the negative prognostic impact of 1q21+. Areas covered: This review discusses the detection, biology, prognosis, and therapeutic targeting of 1q21+ in newly diagnosed and relapsed MM. Patients with MM and 1q21+ tend to present with higher tumor burden, greater end-organ damage, and more co-occurring high-risk cytogenetic abnormalities than patients without 1q21+. The chromosomal rearrangements associated with 1q21+ result in dysregulation of genes involved in oncogenesis. Identification and characterization of the 1q21+ molecular targets are needed to inform on prognosis and treatment strategy. Clinical trial data are emerging that addition of isatuximab to combination therapies may improve outcomes in patients with 1q21+ MM. Expert opinion: In the next 5 years, the results of ongoing research and trials are likely to focus on the therapeutic impact and treatment decisions associated with 1q21+ in MM.
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  • 文章类型: Journal Article
    OBJECTIVE: The aim of this review was to evaluate the scientific literature regarding the cytogenetic damage in oral exfoliated cells of adult patients submitted to panoramic X-ray.
    METHODS: An extensive search of the literature was conducted on PubMed, Scopus and Web of Science databases for all studies published until April 2021 using combinations of the following keywords: \"panoramic X-ray,\" \"DNA damage,\" \"genetic damage\", \"genotoxicity\", \"mutagenicity\", cytotoxicity\", \"buccal cells\", \"oral mucosa\", \"tongue\", \"gingiva\", \"micronucleus assay\", according to the PRISMA guidelines. All clinical studies in English language were included in the study. A total of 10 studies were identified.
    RESULTS: As expected, the results regarding the cytogenetic damage induced by panoramic X-ray are conflicting. Some authors have demonstrated that panoramic X-ray induces mutagenesis in oral cells, whereas others did not. After reviewing the 10 studies, two were classified as strong, four were considered moderate, and four were considered weak, according to the quality assessment components of the Effective Public Health Practice Project (EPHPP). Meta-analysis data revealed a negative response related to mutagenicity in oral cells by panoramic X-ray.
    CONCLUSIONS: Taken together, this review failed to demonstrate the association between micronucleus frequency and panoramic X-ray.
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  • 文章类型: Journal Article
    目的:确定子宫内膜异位(EM)组织中染色体和基因的改变可能与子宫内膜异位症的临床过程或进展有关,并回顾有关子宫内膜异位症妇女的细胞遗传学发现的文献。
    方法:在雅典创世纪诊所接受腹腔镜子宫内膜异位症手术的15名妇女被纳入研究。手术切除异位子宫内膜组织,并通过常规和分子细胞遗传学技术进一步分析。带有p53,ATM,MYC,MLL1和IGH基因,进行了7号和8号染色体的着丝粒和7q22/7q31染色体区域的着丝粒。
    结果:核型分析显示没有克隆染色体异常。然而,注意到有关9、11、17和X染色体的多倍体(55.6%)和零星染色体异常(40.0%)的频率增加,主要涉及缺失,三体或单体。FISH分析显示,54%的EM病例中IGH基因重排,73%的检查样品中MLL基因重排。观察到p53、ATM和MYC的正常杂交模式。FISH也证实了常规核型分析显示的多倍体频率增加。
    结论:多倍体,偶发性染色体异常,以及IGH和MLL基因重排,可能会引起遗传不稳定,并在子宫内膜异位症的发展中起潜在作用。IGH和MLL基因重排表明子宫内膜异位症与癌变之间存在遗传关系。在大量女性中确认上述基因重排可以确定她们可能参与这种复杂疾病的发病机理,以及她们在早期识别处于恶性转化危险中的女性中的可能贡献。
    OBJECTIVE: To determine chromosome and gene alterations in ectopic endometrial (EM) tissue which may be implicated in the clinical course or the progression of endometriosis and to review the literature concerning the cytogenetic findings of women with endometriosis.
    METHODS: 15 women who underwent laparoscopic endometriosis surgery at the Athens Genesis Clinic were enrolled in the study. Ectopic endometrial tissue was surgically removed and further analyzed by conventional and molecular cytogenetic techniques. Fluoresent in situ hibridization (FISH) with probes for p53, ATM, MYC, MLL1 and IGH genes, the centromeres of chromosomes 7 and 8 and 7q22/7q31 chromosomal regions was carried out.
    RESULTS: Karyotypic analysis revealed no clonal chromosomal abnormalities. However, an increased frequency of polyploidy (55.6%) and sporadic chromosomal abnormalities (40.0%) concerning chromosomes 9, 11, 17 and X were noticed involving mainly deletions, trisomies or monosomies. FISH analysis showed IGH gene rearrangements in 54% of the EM cases and MLL gene rearrangements in 73% of the examined samples. Normal hybridization patterns were observed for p53, ATM and MYC. The increased frequency of polyploidy shown by conventional karyotyping was also confirmed by FISH.
    CONCLUSIONS: Polyploidy, sporadic chromosomal abnormalities, as well as IGH and MLL gene rearrangements, may provoke genetic instability and play a potential role in the development of endometriosis. IGH and MLL gene rearrangements indicate a genetic relation between endometriosis and carcinogenesis. Confirmation of the above gene rearrangements in a large series of women may allow the determination of their possible involvement in the pathogenesis of this complex disease and their possible contribution in the early identification of women in danger for malignant transformation.
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