molecular autopsy

分子尸检
  • 文章类型: Journal Article
    尽管经过法医检查,突然的意外死亡通常仍未解决,给病理学家带来挑战。分子尸检,通过基因检测,可以揭示标准方法无法检测到的隐藏原因。这篇综述评估了分子尸检在澄清SUD病例中的作用,检查其方法论,实用程序,以及尸检实践的有效性。该系统评价遵循PRISMA指南,并在PROSPERO注册(注册号:CRD42024499832)。在PubMed上搜索,Scopus,和WebofScience确定了有关猝死病例的分子尸检的英语研究(2018-2023)。根据纳入/排除标准记录和过滤来自选定研究的数据。描述性统计分析了研究范围,组织使用情况,出版国家,和期刊。共发现过去5年的1759种出版物,排除了30个重复项。经过详细考虑,1645种出版物也被排除在外,留下84篇全文供选择。在这些中,选择了37篇全文进行分析。分析了不同的研究类型。在17项研究中发现了突变,总共有47个突变.当标准考试不足以确定猝死原因时,分子调查至关重要。由于不同的遗传条件,分子生物学的专业知识至关重要。验尸方案的差异会影响结果的有效性,标准化是必要的。多学科方法和不同组织类型的分析是至关重要的。
    Sudden unexpected deaths often remain unresolved despite forensic examination, posing challenges for pathologists. Molecular autopsy, through genetic testing, can reveal hidden causes undetectable by standard methods. This review assesses the role of molecular autopsy in clarifying SUD cases, examining its methodology, utility, and effectiveness in autopsy practice. This systematic review followed PRISMA guidelines and was registered with PROSPERO (registration number: CRD42024499832). Searches on PubMed, Scopus, and Web of Science identified English studies (2018-2023) on molecular autopsy in sudden death cases. Data from selected studies were recorded and filtered based on inclusion/exclusion criteria. Descriptive statistics analyzed the study scope, tissue usage, publication countries, and journals. A total of 1759 publications from the past 5 years were found, with 30 duplicates excluded. After detailed consideration, 1645 publications were also excluded, leaving 84 full-text articles for selection. Out of these, 37 full-text articles were chosen for analysis. Different study types were analyzed. Mutations were identified in 17 studies, totaling 47 mutations. Molecular investigations are essential when standard exams fall short in determining sudden death causes. Expertise in molecular biology is crucial due to diverse genetic conditions. Discrepancies in post-mortem protocols affect the validity of results, making standardization necessary. Multidisciplinary approaches and the analysis of different tissue types are vital.
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  • 文章类型: Journal Article
    背景:先天性代谢错误(IEM)是婴儿期或儿童期猝死(SUD)的罕见但潜在可预防的原因。代谢尸检是建立诊断的最终工具。我们对SUD的代谢和分子尸检进行了回顾性审查,并对生化和遗传发现进行了表征。方法对死后代谢调查的回顾性回顾(干血斑酰基肉碱和氨基酸分析,尿液代谢分析,并对2016年10月至2021年12月期间出现SUD的婴儿和儿童进行了75个IEM基因组的下一代测序),这些婴儿和儿童的尸检结果或尸检特征不确定,怀疑我们地区的潜在IEM.对每个病例的临床和尸检结果进行了回顾。结果在整个研究期间,共有43名婴儿和死亡时年龄在0天至10岁之间的儿童被转诊到作者的实验室。诊断为1例阳性的多酰基辅酶A脱氢酶缺乏症。根据其余患者的结果,建立了干血斑点氨基酸和酰基肉碱谱的死后参考间隔。结论我们的研究证实了代谢尸检的重要性以及在这种情况下结合生化和基因检测的优势。
    Background Inborn errors of metabolism (IEM) are collectively rare but potentially preventable causes of sudden unexpected death (SUD) in infancy or childhood, and metabolic autopsy serves as the final tool for establishing the diagnosis. We conducted a retrospective review of the metabolic and molecular autopsy on SUD and characterized the biochemical and genetic findings. Methodology A retrospective review of postmortem metabolic investigations (dried blood spot acylcarnitines and amino acid analysis, urine metabolic profiling where available, and next-generation sequencing on a panel of 75 IEM genes) performed for infants and children who presented with SUD between October 2016 and December 2021 with inconclusive autopsy findings or autopsy features suspicious of underlying IEM in our locality was conducted. Clinical and autopsy findings were reviewed for each case. Results A total of 43 infants and children aged between zero days to 10 years at the time of death were referred to the authors\' laboratories throughout the study period. One positive case of multiple acyl-CoA dehydrogenase deficiency was diagnosed. Postmortem reference intervals for dried blood spot amino acids and acylcarnitines profile were established based on the results from the remaining patients. Conclusions Our study confirmed the importance of metabolic autopsy and the advantages of incorporating biochemical and genetic testing in this setting.
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  • 文章类型: Journal Article
    调查心源性猝死(SCD)的原因总是很困难;事实上,即使在尸检调查期间,与SCD相关的遗传性心脏病也可能是“沉默的”。在这些情况下,重要的是排除其他病因并协助要求进行基因调查。在这里,这篇综述的目的是收集SCD中最有牵连的基因,并产生一个具有一线和二线研究适应症的小组.根据系统评价的首选报告项目(PRISMA)标准,对一般人群中可能导致SCD的遗传疾病进行了系统评价。随后,当尸检结果为阴性或没有获得性心脏病的证据时,我们列出了可能在心源性猝死情况下进行测试的基因。为了使基因检测更具体、更有效,这是有用的,并要求证实尸检结果与分子调查明显在小组提议。一线研究的基因是HCM,MYBPC3,MYH7,TNNT2,TNNI3,而在DCM的情况下,最牵连的基因是LMNA和TTN,在这些CDM的第二行中,可以研究ACTN2、TPM1、C1QPB。在ACM/ARVC的情况下,分子研究包括DSP,DSG2、DSC2、RYR2、PKP2。信道病与以下基因相关:SCN5A,KCNQ1、KCNH2、KCNE1、RYR2。我们的工作强调了基因检测在法医学和临床病理学中的重要性;此外,这不仅有助于帮助病理学家做出诊断,还可以防止后代家庭中的其他SCD病例,并标准化在全球类似病例中进行的分析类型。
    Investigating the causes of Sudden cardiac death (SCD) is always difficult; in fact, genetic cardiac conditions associated with SCD could be \"silent\" even during autopsy investigation. In these cases, it is important to exclude other aetiology and assist to ask for genetic investigations. Herein, the purpose of this review is to collect the most-implicated genes in SCD and generate a panel with indications for first line and second line investigations. A systematic review of genetic disorders that may cause SCD in the general population was carried out according to the Preferred Reporting Item for Systematic Review (PRISMA) standards. We subsequently listed the genes that may be tested in the case of sudden cardiac death when the autopsy results are negative or with no evidence of acquired cardiac conditions. To make genetic tests more specific and efficient, it is useful and demanded to corroborate autopsy findings with the molecular investigation as evident in the panel proposed. The genes for first line investigations are HCM, MYBPC3, MYH7, TNNT2, TNNI3, while in case of DCM, the most implicated genes are LMNA and TTN, and in second line for these CDM, ACTN2, TPM1, C1QPB could be investigated. In cases of ACM/ARVC, the molecular investigation includes DSP, DSG2, DSC2, RYR2, PKP2. The channelopathies are associated with the following genes: SCN5A, KCNQ1, KCNH2, KCNE1, RYR2. Our work underlines the importance of genetic tests in forensic medicine and clinical pathology; moreover, it could be helpful not only to assist the pathologists to reach a diagnosis, but also to prevent other cases of SCD in the family of the descendant and to standardise the type of analysis performed in similar cases worldwide.
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  • 文章类型: Journal Article
    心源性猝死(SCD)被定义为由于快速发生的心脏原因而导致的意外死亡。尽管确定了预防策略,SCD仍然是全球范围内严重的公共卫生问题。占所有死亡人数的15-20%,因此对现代医学来说是一个挑战,尤其是当它影响到年轻人的时候。年轻人心源性猝死影响年龄≤35岁的人群,包括运动员和非运动员,这是由于各种遗传和非遗传原因。验尸后,如果原因不明,它被称为不明原因的突然死亡,通常归因于遗传原因。在这些情况下,分子尸检-验尸基因检测-对于促进诊断和治疗途径和/或监测病例的家庭成员至关重要。这篇综述旨在详细阐述以基因突变为标志的心脏疾病,有必要对死者进行验尸基因调查,以进行准确的诊断,以促进知情的遗传咨询并为案件的家庭成员实施预防策略。
    Sudden cardiac death (SCD) is defined as unexpected death due to a cardiac cause that occurs rapidly. Despite the identification of prevention strategies, SCD remains a serious public health problem worldwide, accounting for 15-20% of all deaths, and is therefore a challenge for modern medicine, especially when it affects young people. Sudden cardiac death in young people affects the population aged ≤ 35 years, including athletes and non-athletes, and it is due to various hereditary and non-hereditary causes. After an autopsy, if the cause remains unknown, it is called sudden unexplained death, often attributable to genetic causes. In these cases, molecular autopsy-post-mortem genetic testing-is essential to facilitate diagnostic and therapeutic pathways and/or the monitoring of family members of the cases. This review aims to elaborate on cardiac disorders marked by genetic mutations, necessitating the post-mortem genetic investigation of the deceased for an accurate diagnosis in order to facilitate informed genetic counseling and to implement preventive strategies for family members of the cases.
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  • 文章类型: Review
    背景:心脏猝死(SCD)可能发生在明显健康的个体中,包括运动员。我们报告了验尸基因检测的诊断作用,分子尸检(MA),阐明运动员SCD的原因。
    方法:我们回顾了6860例SCD连续病例的数据库,这些病例转诊到我们的心脏病理中心。所有病例都进行了详细的心脏尸检,748例被认为是运动员。其中,42(6%)用MA(28使用靶向测序,14外显子组测序)。变异体被手动分类为致病性(P),可能致病(LP),使用国际指南的未知意义变体(VUS)。临床信息是从完成详细健康问卷的转诊验尸官那里获得的。
    结果:在42名死者中(平均年龄35岁,98%的男性)接受了MA的调查,尸检与结构正常的心脏(突发性心律失常死亡综合征,SADS)在n=33(78%)例中,其次是心律失常性心肌病(ACM)8例(19%)和特发性左心室纤维化1例(2%)。分别有26人(62%)和16人(38%)在运动和休息时死亡。7例(17%)存在被裁定为临床可操作的变体。在2例ACM中,遗传和表型发现之间存在一致性。在SADS病例中发现的所有变异以前都与信道病无关。在5例SADS中发现了心肌病相关基因的临床可操作变体。
    结论:突然死亡的运动员中MA的产率为17%。在SADS案件中,在心肌病相关基因中发现了临床可操作的变异体,而在通道病相关基因中没有发现.ACM是运动员SCD的常见原因,四分之一的死者在FLNC和TMEM43基因中具有临床可操作的变异。
    OBJECTIVE: Sudden cardiac death (SCD) may occur in apparently healthy individuals, including athletes. The aim was to investigate the diagnostic role of post-mortem genetic testing, molecular autopsy (MA), in elucidating the cause of SCD in athletes.
    RESULTS: We reviewed a database of 6860 consecutive cases of SCD referred to our specialist cardiac pathology centre. All cases underwent detailed cardiac autopsy, and 748 were deemed to be athletes. Of these, 42 (6%) were investigated with MA (28 using a targeted sequencing, 14 exome sequencing). Variants were classified as pathogenic, likely pathogenic, or variant of unknown significance using international guidelines. Clinical information was obtained from referring coroners who completed a detailed health questionnaire. Out of the 42 decedents (average age 35 years old, 98% males) who were investigated with MA, the autopsy was in keeping with a structurally normal heart [sudden arrhythmic death syndrome (SADS)] in n = 33 (78%) cases, followed by arrhythmogenic cardiomyopathy (ACM) in eight (19%) individuals and idiopathic left ventricular fibrosis in one (2%). Death occurred during exercise and at rest in 26 (62%) and 16 (38%) individuals, respectively. Variants that were adjudicated clinically actionable were present in seven cases (17%). There was concordance between the genetic and phenotypic findings in two cases of ACM (in FLNC and TMEM43 genes). None of the variants identified in SADS cases were previously linked to channelopathies. Clinically actionable variants in cardiomyopathy-associated genes were found in five cases of SADS.
    CONCLUSIONS: The yield of MA in athletes who died suddenly is 17%. In SADS cases, clinically actionable variants were found in cardiomyopathy-associated genes and not in channelopathy-associated genes. Arrhythmogenic cardiomyopathy is a common cause of SCD in athletes, and one in four decedents with this condition had a clinically actionable variant in FLNC and TMEM43 genes.
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  • 文章类型: Journal Article
    日本有各种死亡调查系统;然而,外部检查,死后计算机断层扫描,宏观检查,无论使用何种系统,都要进行显微镜检查。这些检查可以揭示形态异常,而非形态学异常的死亡原因可以通过额外的检查来检测。分子尸检和死后遗传分析是重要的额外检查。它们能够检测遗传性心律失常或遗传性代谢疾病,它们是导致猝死的代表性非形态学疾病,尤其是婴儿和年轻人。在这次审查中,我们介绍了来自日本的分子尸检报告,并描述了我们对代表性病例的经验。还回顾了药物相关死亡与遗传变异之间的关系。根据提供的信息,分子尸检有望被用作死亡调查的常规检查,因为它们可以提供拯救新生命的信息。
    Japan has various death investigation systems; however, external examinations, postmortem computed tomography, macroscopic examinations, and microscopic examinations are performed regardless of the system used. These examinations can reveal morphological abnormalities, whereas the cause of death in cases with non-morphological abnormalities can be detected through additional examinations. Molecular autopsy and postmortem genetic analyses are important additional examinations. They are capable of detecting inherited arrhythmias or inherited metabolic diseases, which are representative non-morphological disorders that cause sudden death, especially in infants and young people. In this review, we introduce molecular autopsy reports from Japan and describe our experience with representative cases. The relationships between drug-related deaths and genetic variants are also reviewed. Based on the presented information, molecular autopsy is expected to be used as routine examinations in death investigations because they can provide information to save new lives.
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    心脏猝死(SCD)是世界上主要的死亡原因之一,因此引起了法律医学领域众多研究者的关注。在SCD病例中确定原因并不容易,并且用于诊断的可用方法不能总是给出详尽的答案。此外,基因的分子分析并不能得出明确的结论,但是将注意力集中在miRNA的表达水平上可能会很有趣,一类约22个核苷酸的非编码RNA。miRNAs的作用是通过与miRNAs的3'-未翻译区域互补结合来调节基因表达,导致翻译抑制或mRNA降解。近年来,进行了几项研究,目的是探索这些分子作为SCD病例的生物标志物的用途,并区分导致心脏死亡的原因。在这次审查中,我们总结实验,证据,以及关于miRNA在SCD病例中的意义的不同研究结果。我们讨论了不同的生物起始材料及其各自的优缺点,研究miRNA在组织(新鲜冷冻组织和FFPE组织)上的表达,SCD高危心脏病患者血液中的循环无细胞miRNAs,和从死于SCD的人的血清中分析的外泌体miRNA。
    Sudden cardiac death (SCD) is one of the leading causes of death in the world and for this reason it has attracted the attention of numerous researchers in the field of legal medicine. It is not easy to determine the cause in a SCD case and the available methods used for diagnosis cannot always give an exhaustive answer. In addition, the molecular analysis of genes does not lead to a clear conclusion, but it could be interesting to focus attention on the expression level of miRNAs, a class of non-coding RNA of about 22 nucleotides. The role of miRNAs is to regulate the gene expression through complementary binding to 3\'-untraslated regions of miRNAs, leading to the inhibition of translation or to mRNA degradation. In recent years, several studies were performed with the aim of exploring the use of these molecules as biomarkers for SCD cases, and to also distinguish the causes that lead to cardiac death. In this review, we summarize experiments, evidence, and results of different studies on the implication of miRNAs in SCD cases. We discuss the different biological starting materials with their respective advantages and disadvantages, studying miRNA expression on tissue (fresh-frozen tissue and FFPE tissue), circulating cell-free miRNAs in blood of patients affected by cardiac disease at high risk of SCD, and exosomal miRNAs analyzed from serum of people who died from SCD.
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  • 文章类型: Journal Article
    背景技术婴儿猝死综合征(SIDS)是1岁以下死亡的主要原因。儿童猝死(SUDC)类似,但主要影响1至4岁的幼儿。SUDC比小岛屿发展中国家更罕见,尽管心脏遗传学测试(分子尸检)确定了一小部分SIDS的根本原因,对SUDC的了解较少。方法和结果77例SIDS和16例SUDC患者接受了25个明确证据的心律失常相关基因的分子尸检。在18个案例中,分析了另外76个具有不同程度证据的基因。为父母提供了级联筛查。临床遗传数据的双盲审查建立了基因型-表型相关性。SUDC中25个基因中可能致病变异的产量高于SIDS(18.8%[3/16]对2.6%[2/77],分别为;P=0.03),而具有不确定意义的新型/超罕见变体的代表性相当。仅在SIDS中发现了意义不确定的罕见变异和可能的良性变异。在扩展分析的情况下,可能的致病性/可能的良性变异仅源于明确证据基因,而所有其他基因仅贡献了不确定意义的变异。在接受筛查的24位父母中,变异状态和表型基本一致,3例与心血管病呈正相关。基因型-表型相关性显着辅助变体裁定。结论SUDC的遗传产量高于SIDS,尽管,在两者中,它仅由确定的证据基因贡献。SIDS/SUDC级联家庭筛查有助于通过明确的变体裁决确定或驳回诊断,表明匿名不再是合理的。信道病变可能是SUDC的相关部分的基础。遗传因果关系的二元分类(致病性与良性)并不总是足够的。
    Background Sudden infant death syndrome (SIDS) is the leading cause of death up to age 1. Sudden unexplained death in childhood (SUDC) is similar but affects mostly toddlers aged 1 to 4. SUDC is rarer than SIDS, and although cardiogenetic testing (molecular autopsy) identifies an underlying cause in a fraction of SIDS, less is known about SUDC. Methods and Results Seventy-seven SIDS and 16 SUDC cases underwent molecular autopsy with 25 definitive-evidence arrhythmia-associated genes. In 18 cases, another 76 genes with varying degrees of evidence were analyzed. Parents were offered cascade screening. Double-blind review of clinical-genetic data established genotype-phenotype correlations. The yield of likely pathogenic variants in the 25 genes was higher in SUDC than in SIDS (18.8% [3/16] versus 2.6% [2/77], respectively; P=0.03), whereas novel/ultra-rare variants of uncertain significance were comparably represented. Rare variants of uncertain significance and likely benign variants were found only in SIDS. In cases with expanded analyses, likely pathogenic/likely benign variants stemmed only from definitive-evidence genes, whereas all other genes contributed only variants of uncertain significance. Among 24 parents screened, variant status and phenotype largely agreed, and 3 cases positively correlated for cardiac channelopathies. Genotype-phenotype correlations significantly aided variant adjudication. Conclusions Genetic yield is higher in SUDC than in SIDS although, in both, it is contributed only by definitive-evidence genes. SIDS/SUDC cascade family screening facilitates establishment or dismissal of a diagnosis through definitive variant adjudication indicating that anonymity is no longer justifiable. Channelopathies may underlie a relevant fraction of SUDC. Binary classifications of genetic causality (pathogenic versus benign) could not always be adequate.
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  • 文章类型: Case Reports
    婴儿突然意外死亡(SUDI)是家庭的创伤事件,不幸的是,它在世界许多地方仍然很高。虽然大多数情况下死因已经解决,其他人在验尸后仍未确定。人们已经认识到基因检测在无法解释的病例中的作用,以前的研究已经通过DNA分析证明了病例的分辨率。在这里,我们介绍了两个在盐河太平间住院的SUDI病例的病例报告,南非,并显示使用临床外显子组测序确定了两名婴儿的潜在死亡原因。第一个婴儿是COL6A3中变体(rs148175795)的杂合子,这表明支气管肺发育不良表型。这一假设导致在DMP1中发现了第二个候选变体(rs142880465),这可能有助于更严重表型的双基因/多基因机制。保留组织切片的组织学分析显示窒息死亡机制,潜在的支气管肺发育不良引起的细支气管肌无力可能通过影响呼吸而导致窒息。在第二个婴儿中,在MASP1中鉴定了纯合变体(rs201340753),该变体在每个亲本中都是杂合的,强调在遗传研究中包括亲本DNA的价值。虽然无法评估甘露糖结合凝集素缺乏症,这种变异可能与三重风险模型中的其他风险因素共同作用,导致猝死,这是合理的.这些结果可能对家庭成员有遗传影响,并代表分子尸检可能的新候选变体。
    Sudden unexpected death in infants (SUDI) is a traumatic event for families, and unfortunately its occurrence remains high in many parts of the world. Whilst cause of death is resolved for most cases, others remain undetermined following postmortem investigations. There has been a recognition of the role of genetic testing in unexplained cases, where previous studies have demonstrated the resolution of cases through DNA analyses. Here we present two case reports of SUDI cases admitted to Salt River Mortuary, South Africa, and show that underlying causes of death were determined for both infants using clinical exome sequencing. The first infant was heterozygous for a variant (rs148175795) in COL6A3, which suggested a bronchopulmonary dysplasia phenotype. This hypothesis led to finding of a second candidate variant in DMP1 (rs142880465), which may contribute towards a digenic/polygenic mechanism of a more severe phenotype. Histological analysis of retained tissue sections showed an asphyxial mechanism of death, where bronchiolar muscle weakness from an underlying bronchopulmonary dysplasia may have contributed to the asphyxia by affecting respiration. In the second infant, a homozygous variant (rs201340753) was identified in MASP1, which was heterozygous in each parent, highlighting the value of including parental DNA in genetic studies. Whilst mannose-binding lectin deficiency could not be assessed, it is plausible that this variant may have acted in combination with other risk factors within the triple-risk model to result in sudden death. These results may have genetic implications for family members, and represent possible new candidate variants for molecular autopsies.
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