molecular autopsy

分子尸检
  • 文章类型: Journal Article
    心肌病的诊断通常依赖于病理学家的主观判断,由于病情的形态学变化和特异性低。这种不确定性可能导致无法解释的心脏猝死(USCD)。提高遗传性心肌病法医学诊断的准确性,我们提出了分子尸检和病理尸检的结合。通过分析16名疑似心肌病的死亡患者,在分子尸检中使用全外显子组测序(WES),并应用联合诊断策略,该研究发现6例患者有致病性或可能的致病性变异。在16个案例中,在3例中证实了心肌病,而3例表现出与之一致的条件。4例数据无定论,心肌病在6年被排除。值得注意的是,鉴定了TTN基因的新变体。这项研究表明,分级诊断策略,结合分子和病理证据,可以提高法医心肌病诊断的准确性。这种方法为精确的法医死因判定提供了一个实用的模型和策略,解决在心肌病病例中仅仅依赖形态学评估的局限性,整合遗传信息以进行更全面的诊断。
    The diagnosis of cardiomyopathy often relies on the subjective judgment of pathologists due to the variety of morphologic changes in the condition and its low specificity. This uncertainty can contribute to unexplained sudden cardiac deaths (USCD). To enhance the accuracy of hereditary cardiomyopathy diagnosis in forensic medicine, we proposed a combination of molecular autopsy and pathologic autopsy. By analyzing 16 deceased patients suspected of cardiomyopathy, using whole exome sequencing (WES) in molecular autopsy, and applying a combined diagnostic strategy, the study found pathogenic or likely pathogenic variants in 6 cases. Out of the 16 cases, cardiomyopathy was confirmed in 3, while 3 exhibited conditions consistent with it. Data for 4 cases was inconclusive, and cardiomyopathy was ruled out in 6. Notably, a novel variant of the TTN gene was identified. This research suggests that a grading diagnostic strategy, combining molecular and pathological evidence, can improve the accuracy of forensic cardiomyopathy diagnosis. This approach provides a practical model and strategy for precise forensic cause-of-death determination, addressing the limitations of relying solely on morphologic assessments in cardiomyopathy cases, and integrating genetic information for a more comprehensive diagnosis.
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  • 文章类型: Journal Article
    未经授权:寻找与猝死(SD)相关的重要生物标志物。
    UNASSIGNED:通过比较15例意外死亡(AD)和88例SD的全血样本来筛选差异基因。蛋白质-蛋白质相互作用(PPI)网络选择最频繁相互作用的核心基因。机器学习应用于寻找与SD相关的特征基因。采用CIBERSORT方法探讨免疫微环境的变化。
    UNASSIGNED:总共10个核心基因(MYL1,TNNC2,TNNT3,TCAP,获得TNNC1,TPM2,MYL2,TNNI1,ACTA1,CKM),它们主要与心肌炎有关,肥厚性心肌炎和扩张型心肌病(DCM)。通过机器学习建立了与SD相关的MYL2和TNNT3的特征基因。SD前后免疫微环境无明显变化。
    UNASSIGNED:检测特征基因有助于识别SD高危患者并推测死亡原因。
    UNASSIGNED: To search for significant biomarkers associated with sudden death (SD).
    UNASSIGNED: Differential genes were screened by comparing the whole blood samples from 15 cases of accidental death (AD) and 88 cases of SD. The protein-protein interaction (PPI) network selects core genes that interact most frequently. Machine learning is applied to find characteristic genes related to SD. The CIBERSORT method was used to explore the immune-microenvironment changes.
    UNASSIGNED: A total of 10 core genes (MYL1, TNNC2, TNNT3, TCAP, TNNC1, TPM2, MYL2, TNNI1, ACTA1, CKM) were obtained and they were mainly related to myocarditis, hypertrophic myocarditis and dilated cardiomyopathy (DCM). Characteristic genes of MYL2 and TNNT3 associated with SD were established by machine learning. There was no significant change in the immune-microenvironment before and after SD.
    UNASSIGNED: Detecting characteristic genes is helpful to identify patients at high risk of SD and speculate the cause of death.
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  • 文章类型: Journal Article
    为了更好地了解不明原因猝死的原因,我们小组在全球范围内评估了相关研究的科学结果.对科学网的系统搜索,PubMed和MEDLINE数据库确定了1997年至2020年发表的与该领域相关的2001年研究。这些研究采用文献计量学方法进行了分析,并绘制统计图以探索研究趋势和研究前沿。心源性猝死和意外癫痫猝死是原因不明的猝死的两个主要原因。近10年来,随着高通量测序技术和生物信息学的快速发展,分子尸检已成为一种有效的研究方法,也是探索不明原因猝死原因的研究热点。然而,在癫痫突然意外死亡的调查中,分子尸检没有得到充分利用。为死者及其家属制定诊断策略的标准化指南,扩大相关疾病的突变谱筛查,研究复杂遗传疾病中变异与疾病之间的关联,完善变异解释指南和疾病测序数据库是未来的研究方向。
    To better understand the cause of sudden unexplained death, our group evaluated the scientific results of related studies in a global context. A systematic search of the Web of Science, PubMed and MEDLINE databases identified 2001 studies related to this field published from 1997 to 2020. The studies were analyzed using bibliometric methods, and statistical maps were drawn to explore research trends and research frontiers. Sudden cardiac death and sudden unexpected epilepsy death were the two major causes of sudden unexplained deaths. With the rapid development of high-throughput sequencing technology and bioinformatics in the past 10 years, molecular autopsy has become an effective research method as well as a research hotspot for exploring the cause of sudden unexplained deaths. However, molecular autopsy is underutilized in the investigation of sudden unexpected death in epilepsy. Developing standardized guidelines for diagnostic strategies for the deceased and their families, expanding the screening of mutation spectrum of related diseases, studying the association between variants and diseases in complex genetic diseases, and improving variants interpretation guidelines and disease sequencing databases are future research directions.
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  • 文章类型: Journal Article
    主动脉夹层(AD)通常仍未诊断,但是它的表现是突然的,并且与高发病率和不良预后有关,导致心脏性猝死.COL家族基因的变异与AD有关。在病例1中,一名32岁的中国男子因腹痛入院,第二天死亡。在案例2中,一名36岁的中国妇女因腰部疼痛入院,并于第二天下午死亡。根据尸检结果,两种情况下的死因都是急性心脏压塞,这归因于AD破裂。对从两名死亡患者的心脏收集的血液进行全外显子组测序。在两种情况下都发现了COL家族基因的阳性变异,在其他AD相关基因中没有阳性变异。在案例1中,一部小说,可能致病,在COL6A1中发现错义变异。在案例2中,我们确定了一部小说,可能致病,COL23A1和一部小说中的移码删除,可能致病,COL1A2中的错义突变。基于这两个案例,医师应考虑COL家族基因突变在青年患者AD中的作用和意义.此外,分子解剖学在由AD引起的心脏猝死的病例中显然是必要和重要的,尤其是年轻人。
    Aortic dissection (AD) usually remains undiagnosed, but its manifestation is abrupt and is associated with high morbidity and poor prognosis, leading to sudden cardiac death. Variants in COL family genes are associated with AD. In case 1, a 32-year-old Chinese man was admitted to the hospital with complaints of abdominal pain and died on the next day. In case 2, a 36-year-old Chinese woman was admitted to the hospital because of waist pain and died the next afternoon. According to autopsy findings, the cause of death in both cases was an acute cardiac tamponade, which was attributed to AD rupture. Whole-exome sequencing was performed on the blood collected from the hearts of the two deceased patients. Positive variants in COL family genes were found in both cases, without positive variants in other AD-associated genes. In case 1, a novel, likely pathogenic, missense variant was identified in COL6A1. In case 2, we identified one novel, likely pathogenic, frameshift deletion in COL23A1 and one novel, likely pathogenic, missense mutation in COL1A2. Based on these two cases, physicians should consider the role and significance of COL family gene mutations in AD in young patients. Furthermore, molecular anatomy is clearly necessary and significant in cases of sudden cardiac death attributed to AD, particularly in younger individuals.
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  • 文章类型: Case Reports
    恶性高热(MH)是一种常染色体显性遗传病,其特征是响应触发剂而在骨骼肌中异常的钙稳态。尸检,形态学,我们对一名19岁男性患者进行了基因分析,该患者在颌面手术期间暴露于七氟醚后迅速死亡.显微镜观察手术区周围肌肉痉挛和肢体僵硬,肾小管充满肌红蛋白管型。通过透射电子显微镜(TEM)检测骨骼肌和心肌的超微结构变化。遗传分析揭示了死者及其父亲的1型ryanodine受体(RYR1)基因突变和染色体19q(G1021A)中的核苷突变。根据上述结果,死亡原因与MH之间的关系得到证实。因此,遗传分析可能是诊断MH的重要程序。
    Malignant hyperthermia (MH) is an autosomal dominant disorder characterized by abnormal calcium homeostasis in skeletal muscles in response to triggering agents. Autopsy, morphology, and genetic analysis were performed on a 19-year-old man who died rapidly after exposure to sevoflurane during maxillofacial surgery. Muscle spasm around the operation area and limb rigidity occurred and renal tubules full of myoglobin casts were observed by microscopy. Ultrastructural changes in the skeletal muscles and the myocardium were detected by transmission electron microscopy (TEM). Genetic analysis disclosed a ryanodine receptor type 1 (RYR1) gene mutation and a nucleoide mutation in chromosome 19q (G1021A) in the deceased and his father. According to the fore mentioned results, the relationship between the cause of death and MH was confirmed. Thus, genetic analysis can be an important procedure in diagnosing MH.
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