molecular autopsy

分子尸检
  • 文章类型: Case Reports
    婴儿突然意外死亡(SUDI)是家庭的创伤事件,不幸的是,它在世界许多地方仍然很高。虽然大多数情况下死因已经解决,其他人在验尸后仍未确定。人们已经认识到基因检测在无法解释的病例中的作用,以前的研究已经通过DNA分析证明了病例的分辨率。在这里,我们介绍了两个在盐河太平间住院的SUDI病例的病例报告,南非,并显示使用临床外显子组测序确定了两名婴儿的潜在死亡原因。第一个婴儿是COL6A3中变体(rs148175795)的杂合子,这表明支气管肺发育不良表型。这一假设导致在DMP1中发现了第二个候选变体(rs142880465),这可能有助于更严重表型的双基因/多基因机制。保留组织切片的组织学分析显示窒息死亡机制,潜在的支气管肺发育不良引起的细支气管肌无力可能通过影响呼吸而导致窒息。在第二个婴儿中,在MASP1中鉴定了纯合变体(rs201340753),该变体在每个亲本中都是杂合的,强调在遗传研究中包括亲本DNA的价值。虽然无法评估甘露糖结合凝集素缺乏症,这种变异可能与三重风险模型中的其他风险因素共同作用,导致猝死,这是合理的.这些结果可能对家庭成员有遗传影响,并代表分子尸检可能的新候选变体。
    Sudden unexpected death in infants (SUDI) is a traumatic event for families, and unfortunately its occurrence remains high in many parts of the world. Whilst cause of death is resolved for most cases, others remain undetermined following postmortem investigations. There has been a recognition of the role of genetic testing in unexplained cases, where previous studies have demonstrated the resolution of cases through DNA analyses. Here we present two case reports of SUDI cases admitted to Salt River Mortuary, South Africa, and show that underlying causes of death were determined for both infants using clinical exome sequencing. The first infant was heterozygous for a variant (rs148175795) in COL6A3, which suggested a bronchopulmonary dysplasia phenotype. This hypothesis led to finding of a second candidate variant in DMP1 (rs142880465), which may contribute towards a digenic/polygenic mechanism of a more severe phenotype. Histological analysis of retained tissue sections showed an asphyxial mechanism of death, where bronchiolar muscle weakness from an underlying bronchopulmonary dysplasia may have contributed to the asphyxia by affecting respiration. In the second infant, a homozygous variant (rs201340753) was identified in MASP1, which was heterozygous in each parent, highlighting the value of including parental DNA in genetic studies. Whilst mannose-binding lectin deficiency could not be assessed, it is plausible that this variant may have acted in combination with other risk factors within the triple-risk model to result in sudden death. These results may have genetic implications for family members, and represent possible new candidate variants for molecular autopsies.
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  • 文章类型: Case Reports
    Sudden unexpected death in infants (SUDI) is a devastating event, and unfortunately is still a burden in many parts of the world, including in South Africa. Due to the absence of routine testing for inborn metabolic diseases in newborns and in a post-mortem context, little is known about the presence of metabolic diseases in local SUDI cases. The aim of this study was to genotype five candidate variants previously associated with metabolic disorders in a cohort of SUDI cases (n = 169) from Salt River Mortuary, Cape Town. DNA was isolated from blood, and SNaPshot® PCR and Sanger sequencing were used to genotype the following variants: ACADM: c.583G > A, ACADM: c.985A > G, GCDH: c.877G > A/T, GALT: c.404C > G/T and GALT: c.563A > G. Four carriers of GCDH: c.877G > A/T were identified, while one infant was homozygous for the founder mutation GALT: c.404C > G/T; the latter which is causative of galactosaemia and was previously undiagnosed. During the follow-up with the family, it emerged that the affected infant\'s identical twin had subsequently demised. The findings in this study highlight possible new candidate variants to assess in South African SUDI cases, and these results directly contribute to the development of a molecular autopsy which is locally relevant. It is evident that until newborn screening becomes routine and accessible in South Africa, molecular autopsies should include testing for inherited metabolic disorders, as it holds potential to save lives.
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  • 文章类型: Case Reports
    一个34岁的男人,以前身体健康,在锻炼中突然死亡。法医病理学家进行的验尸和毒理学筛查是正常的;因此,死因被怀疑是心律失常性猝死综合征,提示需要进行分子尸检.通过下一代测序筛选潜在的心律失常基因的遗传变异,突出了外显子n中的杂合单核苷酸变异。ryanodine受体2型基因的94。这个基因,编码心脏ryanodine受体,是儿茶酚胺能多形性室性心动过速的主要遗传变异之一,据估计,每10,000人中就有1人受到影响。表现为晕厥,癫痫发作,或由于运动或情绪压力引起的双向或多形性室性心动过速而猝死,通常在心脏形态正常和基线心电图正常的儿童和年轻人中。即使这种从头错义突变尚未与儿茶酚胺能多形性室性心动过速相关,它很可能是一种致病变体,导致导致离子流紊乱的蛋白质缺陷。
    A 34-year-old man, who was previously fit and healthy, died suddenly on exercise. A post-mortem exam performed by forensic pathologists and a toxicological screening were normal; therefore, the cause of death was suspected to be sudden arrhythmic death syndrome, prompting the need for a molecular autopsy. Screening for genetic variations underlying arrhythmogenic genes by next-generation sequencing highlighted a heterozygous single-nucleotide variant in the exon n. 94 of the ryanodine receptor type 2 gene. This gene, encoding the cardiac ryanodine receptor, is one of the main genetic variants of catecholaminergic polymorphic ventricular tachycardia, estimated to affect 1 in 10,000 individuals. It manifests with syncope, seizures, or sudden death due to exercise- or emotional stress-induced bidirectional or polymorphic ventricular tachycardia, usually in children and young adults with morphologically normal hearts and normal baseline electrocardiograms. Even if this de novo missense mutation has not yet been associated with catecholaminergic polymorphic ventricular tachycardia, it is likely to be a disease-causing variant which leads to a defective protein responsible for disturbed ion flow.
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  • 文章类型: Case Reports
    肥厚型心肌病(HCM)是一种遗传性心肌病,患病率约为1:200。它的特点是左心室肥厚,舒张功能障碍和间质纤维化;HCM可能导致心脏猝死(SCD),尤其是在年轻人中。由于原因不明的猝死(SUD)的尸检频率较低,因此SUD中SCD尤其是HCM的真实患病率尚不清楚。即使在经过证实的SCD情况下,基因检测也不是常规程序,排除了适当的风险分层和亲属咨询。
    在这里,我们报告了一个19岁的SCD病例,通过法医和分子尸检相结合进行调查。
    在索引患者的尸检期间检测到HCM。由于法医尸检无法发现其他可能的死亡原因,因此该事件被归类为SCD。分子尸检确定了FHL1和MYBPC3中的两种(可能)致病性遗传变异。MYBPC3变体具有不完全的外显率。FHL1变体是从头突变。我们在肌肉样品中检测到FHL1mRNA水平降低,并且没有FHL1蛋白,这表明SCD受害者中无义介导的mRNA衰减和/或截短蛋白的降解揭示了一种合理的疾病机制。
    SCD遗传原因的鉴定有助于亲属的合理咨询和家庭内的风险评估。此外,我们的研究揭示了FHL1突变的病理机制的证据。
    Hypertrophic cardiomyopathy (HCM) is a genetic cardiomyopathy with a prevalence of about 1:200. It is characterized by left ventricular hypertrophy, diastolic dysfunction and interstitial fibrosis; HCM might lead to sudden cardiac death (SCD) especially in the young. Due to low autopsy frequencies of sudden unexplained deaths (SUD) the true prevalence of SCD and especially of HCM among SUD remains unclear. Even in cases of proven SCD genetic testing is not a routine procedure precluding appropriate risk stratification and counseling of relatives.
    Here we report a case of SCD in a 19-year-old investigated by combined forensic and molecular autopsy.
    During autopsy of the index-patient HCM was detected. As no other possible cause of death could be uncovered by forensic autopsy the event was classified as SCD. Molecular autopsy identified two (probably) pathogenic genetic variants in FHL1 and MYBPC3. The MYBPC3 variant had an incomplete penetrance. The FHL1 variant was a de novo mutation. We detected reduced FHL1 mRNA levels and no FHL1 protein in muscle samples suggesting nonsense-mediated mRNA decay and/or degradation of the truncated protein in the SCD victim revealing a plausible disease mechanism.
    The identification of the genetic cause of the SCD contributed to the rational counseling of the relatives and risk assessment within the family. Furthermore our study revealed evidences for the pathomechanism of FHL1 mutations.
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  • 文章类型: Case Reports
    Vertebral artery laceration/dissection (VALD) resulting in fatal subarachnoid hemorrhage (SAH) is a rare, but well-known phenomenon encountered in the forensic setting. Delayed ruptures are exceptionally rare, and pose several challenges to the forensic pathologist. In this paper we present a case of a 47-year-old male who collapsed suddenly following recent complaints of a headache and a reported seizure. He had a reported history of potential head trauma that occurred several days prior. Attempts at resuscitation were unsuccessful, and an autopsy examination was ordered. Computer tomography (CT), autopsy, histological and ancillary studies were performed. External examination showed mild, healing trauma to the head and upper limbs, and pre-autopsy CT demonstrated a SAH. Examination of the brain showed basally oriented SAH, and there was a laceration of the left vertebral artery. Histological examination demonstrated a delayed rupture, and there was no significant blood vessel abnormality. Molecular testing was negative for collagen vascular disorders. Delayed rupture of the vertebral arteries following head trauma is rare. The presence of remote and/or mild trauma may be difficult to establish at autopsy, and it is important to identify underlying aortopathies. Several autopsy techniques and ancillary studies should be performed in these cases.
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