Legionella pneumophila

嗜肺军团菌
  • 文章类型: Journal Article
    抗生素经常引起肝功能异常。Omadacycline是一种新型的氨甲基环素抗生素,对革兰氏阳性和革兰氏阴性需氧显示出有效的活性,厌氧,和非典型(包括嗜肺军团菌)细菌。值得注意的是,奥马环素在大多数肝功能损害患者中可以耐受。然而,关于奥马环素在经历肝功能障碍后的肺炎军团菌肺炎患者中应用的证据很少。
    目前的研究报告了6例肺炎军团菌患者在经历肝功能障碍后接受omadacycline作为后续抗生素。
    这6例因肺炎入院并接受抗生素治疗,包括哌拉西林他唑巴坦,亚胺培南,美罗培南,和莫西沙星.在接受这些抗生素后,注意到肝酶增加。尽管给予了保肝治疗(如异甘草酸镁和谷胱甘肽),肝功能仍然异常。根据宏基因组下一代测序,这些患者被诊断为嗜肺军团菌肺炎.考虑到肝功能异常,抗生素治疗改用含有奥马环素的抗生素治疗.之后,肝功能得到改善,感染得到改善。最终,所有出院的病人,包括2例临床症状完全改善的患者和4例临床症状部分改善的患者。
    这项研究强调了在嗜肺军团菌肺炎患者经历肝功能异常后改用奥马环素的成功治疗。这项研究表明,奥马环素可以作为肺炎军团菌肺炎患者的可选抗生素,尤其是发生肝功能障碍时。然而,需要更多的临床研究来验证我们的发现.
    UNASSIGNED: Antibiotics frequently induce abnormal liver function. Omadacycline is a novel aminomethylcycline antibiotic, which shows potent activity against Gram-positive and Gram-negative aerobic, anaerobic, and atypical (including Legionella pneumophila) bacteria. Of note, omadacycline is tolerable in most patients with liver impairment. However, evidence regarding the application of omadacycline in patients with Legionella pneumophila pneumonia after experiencing liver dysfunction is scarce.
    UNASSIGNED: The current study reported 6 cases of patients with Legionella pneumophila pneumonia receiving omadacycline as subsequent antibiotics after experiencing liver dysfunction.
    UNASSIGNED: These 6 cases were admitted to the hospital for pneumonia and received antibiotic therapy, including piperacillin-tazobactam, imipenem, meropenem, and moxifloxacin. After receiving these antibiotics, increased liver enzymes were noted. Although hepatoprotective therapy (such as magnesium isoglycyrrhizinate and glutathione) was given, the liver function was still abnormal. According to metagenomic next-generation sequencing, these patients were diagnosed with Legionella pneumophila pneumonia. Considering the abnormal liver function, the antibiotic therapy was switched to omadacycline-containing antibiotic therapy. After that, liver function was improved, and the infection was ameliorated. Ultimately, all patients discharged from the hospital, including 2 patients who achieved complete clinical symptomatic improvement and 4 patients who achieved partial clinical symptomatic improvement.
    UNASSIGNED: This study emphasizes the successful treatment of switching to omadacycline after experiencing abnormal liver function in patients with Legionella pneumophila pneumonia. This study suggests that omadacycline may serve as an optional antibiotic for patients with Legionella pneumophila pneumonia, especially when occurring liver dysfunction. However, more clinical studies are required to validate our findings.
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  • 文章类型: Case Reports
    军团菌病是由嗜肺军团菌引起的非典型肺炎。军团菌物种在淡水来源中发现,并通过吸入受污染的气溶胶传播。通常出现发烧的患者,发冷,还有咳嗽.然而,在免疫抑制患者或严重病例中,这种疾病会导致多器官衰竭。近年来,军团病的发病率急剧增加,不幸的是通常诊断不足。金标准诊断是通过痰培养;然而,尿军团菌抗原仍然是最常用的诊断方法。目标导向护理包括抗生素和支持性护理。该病例突出了军团病的罕见和独特表现,表现为2:1天冬氨酸转氨酶升高至丙氨酸转氨酶模式。通常见于酒精性肝炎。
    Legionnaires\' disease is an atypical pneumonia caused by Legionella pneumophila. Legionella species are found in freshwater sources and are transmitted through inhalation of contaminated aerosols. Patients commonly present with fever, chills, and cough. However, in immunosuppressed patients or severe cases, the disease can lead to multiorgan failure. In recent years, the incidence of Legionnaires\' disease has drastically increased and unfortunately is commonly underdiagnosed. Gold-standard diagnosis is made through sputum cultures; however, urine Legionella antigen remains the most common test used for diagnosis. Goal-directed care includes antibiotics and supportive care. This case highlights a rare and unique presentation of Legionnaires\' disease presenting with an elevated 2:1 aspartate aminotransferase to alanine transaminase pattern, typically seen with alcoholic hepatitis.
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  • 文章类型: Journal Article
    这项研究介绍了一种创新的电化学传感器,旨在高灵敏度和快速检测嗜肺军团菌血清群1(L.嗜肺SG1),一种与军团菌病有关的特别强毒株。采用严格的选择过程,利用基于细胞的指数富集配体系统进化(cell-SELEX),我们确定了专门为嗜肺乳杆菌SG1定制的新的高亲和力适体。选择过程包括10轮细胞-SELEX周期与活的嗜肺乳杆菌,包括针对密切相关的军团菌亚种的多个反选择步骤。对嗜肺乳杆菌SG1的最高亲和序列的解离常数(Kd)测量为14.2nM,与先前报道的适体相比,亲和力增加了十倍。为了开发电化学传感器,通过形成自组装单层(SAMs)用所选择的适体修饰金电极。新开发的aptasensor表现出卓越的灵敏度,以及检测和区分各种军团菌的特异性。,检测限为5个菌落形成单位(CFU)/mL,与密切相关的亚种的交叉反应性微不足道/可忽略不计。此外,aptasensor有效检测到加标水样中的嗜肺乳杆菌SG1,显示出可观的恢复百分比。这项研究显示了我们的基于适体的电化学生物传感器作为在不同环境中检测嗜肺乳杆菌SG1的有前途的方法的潜力。
    This study introduces an innovative electrochemical aptasensor designed for the highly sensitive and rapid detection of Legionella pneumophila serogroup 1 (L. pneumophila SG1), a particularly virulent strain associated with Legionellosis. Employing a rigorous selection process utilizing cell-based systematic evolution of ligands by exponential enrichment (cell-SELEX), we identified new high-affinity aptamers specifically tailored for L. pneumophila SG1. The selection process encompassed ten rounds of cell-SELEX cycles with live L. pneumophila, including multiple counter-selection steps against the closely related Legionella sub-species. The dissociation constant (Kd) of the highest affinity sequence to L. pneumophila SG1 was measured at 14.2 nM, representing a ten-fold increase in affinity in comparison with the previously reported aptamers. For the development of electrochemical aptasensor, a gold electrode was modified with the selected aptamer through the formation of self-assembled monolayers (SAMs). The newly developed aptasensor exhibited exceptional sensitivity, and specificity in detecting and differentiating various Legionella sp., with a detection limit of 5 colony forming units (CFU)/mL and an insignificant/negligible cross-reactivity with closely related sub-species. Furthermore, the aptasensor effectively detected L. pneumophila SG1 in spiked water samples, demonstrating an appreciable recovery percentage. This study shows the potential of our aptamer-based electrochemical biosensor as a promising approach for detecting L. pneumophila SG1 in diverse environments.
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  • 文章类型: Journal Article
    背景:军团菌肺炎是非典型肺炎中最严重的类型之一,损害多器官系统,对生命构成威胁.由于培养细菌的困难以及免疫测定灵敏度和特异性的限制,军团菌肺炎的诊断具有挑战性。
    方法:本文报道一例罕见的由嗜肺军团菌和坏死梭菌联合感染引起的脓毒症,导致呼吸衰竭,急性肾损伤,急性肝损伤,心肌损伤,和电解质紊乱。此外,我们系统回顾了军团菌联合感染患者的文献,分析他们的临床特征,实验室结果和诊断。
    结论:对于需要延长潜伏期且对常规培养方法不太敏感的病原体,宏基因组下一代测序(mNGS)可以作为病原体筛查的有力补充,在复杂传染病的辅助诊断中起着重要作用。
    BACKGROUND: Legionella pneumonia is one of the most severe types of atypical pneumonia, impairing multiple organ systems, posing a threat to life. Diagnosing Legionella pneumonia is challenging due to difficulties in culturing the bacteria and limitations in immunoassay sensitivity and specificity.
    METHODS: This paper reports a rare case of sepsis caused by combined infection with Legionella pneumophila and Fusobacterium necrophorum, leading to respiratory failure, acute kidney injury, acute liver injury, myocardial damage, and electrolyte disorders. In addition, we systematically reviewed literature on patients with combined Legionella infections, analyzing their clinical features, laboratory results and diagnosis.
    CONCLUSIONS: For pathogens that require prolonged incubation periods and are less sensitive to conventional culturing methods, metagenomic next-generation sequencing (mNGS) can be a powerful supplement to pathogen screening and plays a significant role in the auxiliary diagnosis of complex infectious diseases.
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  • 文章类型: Journal Article
    细菌粘附是使小生境环境定殖的基本过程,并且是感染的关键。然而,在嗜肺军团菌中,军团病的病原体,这些过程还没有得到很好的理解。军团菌胶原蛋白(Lcl)是一种细胞外外周膜蛋白,可识别真核细胞表面的硫酸化糖胺聚糖,但也刺激细菌聚集响应二价阳离子。在这里,我们报告了LclC末端结构域(Lcl-CTD)的晶体结构,并提出了完整Lcl的模型。我们的数据表明,Lcl-CTD形成了一种不寻常的三聚体排列,其带正电荷的外表面和带负电荷的溶剂暴露于内腔。通过分子动力学模拟,我们展示了糖胺聚糖-4-硫酸软骨素如何通过不同的结合模式与Lcl-CTD表面结合。我们的发现表明,Lcl同源物存在于Pseudomonadota和Fibrobacterota-Clobiota-Bacteroidota门,并表明Lcl可能代表一种通用的碳水化合物结合机制。
    Bacterial adhesion is a fundamental process which enables colonisation of niche environments and is key for infection. However, in Legionella pneumophila, the causative agent of Legionnaires\' disease, these processes are not well understood. The Legionella collagen-like protein (Lcl) is an extracellular peripheral membrane protein that recognises sulphated glycosaminoglycans on the surface of eukaryotic cells, but also stimulates bacterial aggregation in response to divalent cations. Here we report the crystal structure of the Lcl C-terminal domain (Lcl-CTD) and present a model for intact Lcl. Our data reveal that Lcl-CTD forms an unusual trimer arrangement with a positively charged external surface and negatively charged solvent exposed internal cavity. Through molecular dynamics simulations, we show how the glycosaminoglycan chondroitin-4-sulphate associates with the Lcl-CTD surface via distinct binding modes. Our findings show that Lcl homologs are present across both the Pseudomonadota and Fibrobacterota-Chlorobiota-Bacteroidota phyla and suggest that Lcl may represent a versatile carbohydrate-binding mechanism.
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  • 文章类型: Journal Article
    通过免疫记忆,感染对宿主有持久的影响。虽然记忆细胞能够在用相同的病原体再次攻击时加速和增强反应,它们对无关疾病易感性的影响尚不清楚.我们鉴定了记忆T辅助1(Th1)细胞的子集,称为先天作用记忆T(TIA)细胞,其起源于病毒感染,并在体内异源攻击时产生具有先天动力学的IFN-γ。记忆TIA细胞的活化是响应于IL-12与IL-18或IL-33的组合而诱导的,但不依赖于TCR。记忆TIA细胞的快速IFN-γ产生在随后与细菌病原体嗜肺军团菌的异源攻击中是保护性的。相比之下,在多发性硬化的自身免疫模型中,CD4+记忆TIA细胞的抗原非依赖性再激活加速疾病的发作.我们的发现表明,记忆Th1细胞可以获得额外的TCR无关功能,调节对异源挑战的易感性的先天样反应。
    Through immune memory, infections have a lasting effect on the host. While memory cells enable accelerated and enhanced responses upon rechallenge with the same pathogen, their impact on susceptibility to unrelated diseases is unclear. We identify a subset of memory T helper 1 (Th1) cells termed innate acting memory T (TIA) cells that originate from a viral infection and produce IFN-γ with innate kinetics upon heterologous challenge in vivo. Activation of memory TIA cells is induced in response to IL-12 in combination with IL-18 or IL-33 but is TCR independent. Rapid IFN-γ production by memory TIA cells is protective in subsequent heterologous challenge with the bacterial pathogen Legionella pneumophila. In contrast, antigen-independent reactivation of CD4+ memory TIA cells accelerates disease onset in an autoimmune model of multiple sclerosis. Our findings demonstrate that memory Th1 cells can acquire additional TCR-independent functionality to mount rapid, innate-like responses that modulate susceptibility to heterologous challenges.
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  • 文章类型: Case Reports
    军团菌,导致社区获得性肺炎的主要病原体之一,会导致军团菌肺炎,以严重肺炎为主要特征的病症。这种疾病,由嗜肺军团菌引起,可以迅速发展为危重肺炎,并且通常与多个器官的损害有关。因此,在临床诊断和治疗方面需要密切关注。Omadacycline,一种属于氨基甲基环素类抗生素的新型四环素衍生物,是衍生自米诺环素的半合成化合物。其主要结构特点,氨甲基改性,允许omadacycline克服细菌耐药性并扩大其对细菌的有效性范围。临床研究表明,奥马环素在体内不代谢,肝肾功能不全患者不需要调整剂量。本文报道了一例最初对莫西沙星经验性治疗无反应的患者,使用奥马环素成功治疗了军团菌肺炎。患者还经历了电解质紊乱,以及肝脏和肾脏的功能障碍,谵妄,和其他相关的精神症状。
    Legionella, one of the main pathogens that causes community-acquired pneumonia, can lead to Legionella pneumonia, a condition characterized predominantly by severe pneumonia. This disease, caused by the bacterium Legionella pneumophila, can quickly progress to critical pneumonia and is often associated with damage to multiple organs. As a result, it requires close attention in terms of clinical diagnosis and treatment. Omadacycline, a new type of tetracycline derivative belonging to the aminomethylcycline class of antibiotics, is a semi-synthetic compound derived from minocycline. Its key structural feature, the aminomethyl modification, allows omadacycline to overcome bacterial resistance and broadens its range of effectiveness against bacteria. Clinical studies have demonstrated that omadacycline is not metabolized in the body, and patients with hepatic and renal dysfunction do not need to adjust their dosage. This paper reports a case of successful treatment of Legionella pneumonia with omadacycline in a patient who initially did not respond to empirical treatment with moxifloxacin. The patient also experienced electrolyte disturbance, as well as dysfunction in the liver and kidneys, delirium, and other related psychiatric symptoms.
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  • 文章类型: Journal Article
    与“弗兰克”病原体相反,比如内大肠杆菌沙门氏菌,痢疾志贺氏菌,和霍乱弧菌,总是有疾病的可能性,“机会性”病原体是在免疫系统减弱的宿主中引起传染病的生物体,很少在健康宿主中引起传染病。历史上,饮用水处理的重点是控制弗兰克病原体,特别是那些来自人类或动物的来源(如贾第鞭毛虫,微小隐孢子虫,或甲型肝炎病毒),但是近年来,饮用水的爆发越来越多地归因于机会病原体。使它们成为水处理问题的机会病原体的特征包括:(1)它们通常存在于水生环境中,(2)它们生长在生物膜中,保护细菌免受消毒剂的侵害,和(3)在饮用水系统的适当条件下(例如,温暖的水,停滞,低消毒剂水平,等。),这些细菌可以放大到可能构成公共健康风险的水平。饮用水系统中最常见的三种机会致病菌是嗜肺军团菌,鸟分枝杆菌,还有铜绿假单胞菌.本报告重点关注这些生物,以提供有关其公共卫生风险的信息,在饮用水系统中发生,对各种消毒剂的敏感性,和其他操作实践(如管道和储罐的冲洗和清洁)。此外,提供了关于饮用水系统中较不常见的九种其他机会病原体的信息,包括嗜水气单胞菌,肺炎克雷伯菌,粘质沙雷菌,假伯克霍尔德菌,鲍曼不动杆菌,嗜麦芽窄食单胞菌,Butzleri杆菌,和几种自由生活的变形虫,包括Naegleriafowleri和棘阿米巴。饮用水中这些微生物对公众健康的危害尚不清楚。但在大多数情况下,努力管理军团菌,分枝杆菌,和假单胞菌的风险也将对这些其他机会性病原体有效。管理饮用水供应中的机会病原体的方法侧重于控制这些生物的生长。这些微生物中有许多是水中生物膜中的正常居民,因此,注意力较少放在消除这些生物进入系统上,而更多的是管理它们在管网中的出现和浓度。随着与气候变化相关的预期变暖趋势,驱动饮用水系统中机会性病原体生长的因素可能会增加。这很重要,因此,评估治疗障碍和管理活动,以控制机会性病原体风险。初级治疗的控制,特别是浊度管理和消毒,应进行审查,以确保机会病原体控制的充分性。然而,公用事业公司的机会性病原体风险降低计划的主要重点是分配系统中生物活性和生物膜的管理。影响分布系统中微生物(主要在生物膜中)生长的因素包括,温度,消毒剂类型和浓度,营养水平(以AOC或BDOC衡量),停滞,管道的冲洗和储罐沉积物的清洁,和腐蚀控制。压力管理和分配系统完整性对水的微生物质量也很重要,但更多地与污染物侵入分配系统有关,而不是直接与微生物生长有关。总结已确定的饮用水风险,用于治疗的消毒数据的可用性和质量,和控制指南或标准表明,足够的信息是最好的管理肺炎克雷伯菌。对于肺炎支原体,这种生物的风险已经从饮用水中清楚地确定,世界各地的病例有所增加,它是饮用水爆发的最确定的原因之一。水管理最佳实践(例如,在整个分配系统中保持消毒剂残留,冲洗和清洁管道和储罐中的沉积物,除其他外)已被证明可有效控制供水中的嗜肺乳杆菌。此外,饮用水分配系统中的生物控制有充分的管理指南。相比之下,对水中分枝杆菌的风险管理不如对肺炎支原体的风险管理清楚。由于对消毒的抗性,鸟分枝杆菌的治疗是困难的,形成团块的趋势,并附着在生物膜的表面上。此外,饮用水中的鸟分枝杆菌没有管理指南,一项风险评估研究表明,感染风险较低。自来水在其他机会性病原体传播中的作用不太清楚,在许多情况下,管理肺炎支原体的行动(例如,保持消毒剂残留,冲洗,储罐的清洁,等。)也将有助于管理这些生物。
    In contrast to \"frank\" pathogens, like Salmonella entrocolitica, Shigella dysenteriae, and Vibrio cholerae, that always have a probability of disease, \"opportunistic\" pathogens are organisms that cause an infectious disease in a host with a weakened immune system and rarely in a healthy host. Historically, drinking water treatment has focused on control of frank pathogens, particularly those from human or animal sources (like Giardia lamblia, Cryptosporidium parvum, or Hepatitis A virus), but in recent years outbreaks from drinking water have increasingly been due to opportunistic pathogens. Characteristics of opportunistic pathogens that make them problematic for water treatment include: (1) they are normally present in aquatic environments, (2) they grow in biofilms that protect the bacteria from disinfectants, and (3) under appropriate conditions in drinking water systems (e.g., warm water, stagnation, low disinfectant levels, etc.), these bacteria can amplify to levels that can pose a public health risk. The three most common opportunistic pathogens in drinking water systems are Legionella pneumophila, Mycobacterium avium, and Pseudomonas aeruginosa. This report focuses on these organisms to provide information on their public health risk, occurrence in drinking water systems, susceptibility to various disinfectants, and other operational practices (like flushing and cleaning of pipes and storage tanks). In addition, information is provided on a group of nine other opportunistic pathogens that are less commonly found in drinking water systems, including Aeromonas hydrophila, Klebsiella pneumoniae, Serratia marcescens, Burkholderia pseudomallei, Acinetobacter baumannii, Stenotrophomonas maltophilia, Arcobacter butzleri, and several free-living amoebae including Naegleria fowleri and species of Acanthamoeba. The public health risk for these microbes in drinking water is still unclear, but in most cases, efforts to manage Legionella, mycobacteria, and Pseudomonas risks will also be effective for these other opportunistic pathogens. The approach to managing opportunistic pathogens in drinking water supplies focuses on controlling the growth of these organisms. Many of these microbes are normal inhabitants in biofilms in water, so the attention is less on eliminating these organisms from entering the system and more on managing their occurrence and concentrations in the pipe network. With anticipated warming trends associated with climate change, the factors that drive the growth of opportunistic pathogens in drinking water systems will likely increase. It is important, therefore, to evaluate treatment barriers and management activities for control of opportunistic pathogen risks. Controls for primary treatment, particularly for turbidity management and disinfection, should be reviewed to ensure adequacy for opportunistic pathogen control. However, the major focus for the utility\'s opportunistic pathogen risk reduction plan is the management of biological activity and biofilms in the distribution system. Factors that influence the growth of microbes (primarily in biofilms) in the distribution system include, temperature, disinfectant type and concentration, nutrient levels (measured as AOC or BDOC), stagnation, flushing of pipes and cleaning of storage tank sediments, and corrosion control. Pressure management and distribution system integrity are also important to the microbial quality of water but are related more to the intrusion of contaminants into the distribution system rather than directly related to microbial growth. Summarizing the identified risk from drinking water, the availability and quality of disinfection data for treatment, and guidelines or standards for control showed that adequate information is best available for management of L. pneumophila. For L. pneumophila, the risk for this organism has been clearly established from drinking water, cases have increased worldwide, and it is one of the most identified causes of drinking water outbreaks. Water management best practices (e.g., maintenance of a disinfectant residual throughout the distribution system, flushing and cleaning of sediments in pipelines and storage tanks, among others) have been shown to be effective for control of L. pneumophila in water supplies. In addition, there are well documented management guidelines available for the control of the organism in drinking water distribution systems. By comparison, management of risks for Mycobacteria from water are less clear than for L. pneumophila. Treatment of M. avium is difficult due to its resistance to disinfection, the tendency to form clumps, and attachment to surfaces in biofilms. Additionally, there are no guidelines for management of M. avium in drinking water, and one risk assessment study suggested a low risk of infection. The role of tap water in the transmission of the other opportunistic pathogens is less clear and, in many cases, actions to manage L. pneumophila (e.g., maintenance of a disinfectant residual, flushing, cleaning of storage tanks, etc.) will also be beneficial in helping to manage these organisms as well.
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  • 文章类型: Case Reports
    除了典型的肺炎表现外,嗜肺军团菌还可引起大量症状。在这里,我们介绍了一个在随后的免疫功能低下患者中致命的医院蜂窝织炎的病例,一年后,同一病房的第二例军团病。虽然根据症状出现的日期,第一例很容易被认为是医院感染,第二种情况需要明确的分型结果被分配为医院和与第一种情况相同的环境来源,或社区获得。为了解开这个具体的问题,我们应用核心基因组多位点分型(MLST),使用文献中推荐的阈值和基于当地流行病学数据的定制阈值,对36个比利时和41个国际序列1型(ST1)分离株进行全基因组单核苷酸多态性和全基因组MLST方法.根据应用于集群隔离的阈值,这三种方法给出了不同的结果,对于第二例病例的医院设置没有得出确切的结论。我们的数据表明,尽管在疫情研究和大规模流行病学调查中取得了有希望的结果,应用于ST1疫情调查的下一代测序分型方法在湿实验室方案和生物信息学方面仍需要标准化.还需要对嗜肺乳杆菌进化时钟进行更深入的评估,以增加我们对在临床感染期间和环境中采样的分离株之间的基因组差异的理解。
    Legionella pneumophila can cause a large panel of symptoms besides the classic pneumonia presentation. Here we present a case of fatal nosocomial cellulitis in an immunocompromised patient followed, a year later, by a second case of Legionnaires\' disease in the same ward. While the first case was easily assumed as nosocomial based on the date of symptom onset, the second case required clear typing results to be assigned either as nosocomial and related to the same environmental source as the first case, or community acquired. To untangle this specific question, we applied core-genome multilocus typing (MLST), whole-genome single nucleotide polymorphism and whole-genome MLST methods to a collection of 36 Belgian and 41 international sequence-type 1 (ST1) isolates using both thresholds recommended in the literature and tailored threshold based on local epidemiological data. Based on the thresholds applied to cluster isolates together, the three methods gave different results and no firm conclusion about the nosocomial setting of the second case could been drawn. Our data highlight that despite promising results in the study of outbreaks and for large-scale epidemiological investigations, next-generation sequencing typing methods applied to ST1 outbreak investigation still need standardization regarding both wet-lab protocols and bioinformatics. A deeper evaluation of the L. pneumophila evolutionary clock is also required to increase our understanding of genomic differences between isolates sampled during a clinical infection and in the environment.
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  • 文章类型: Journal Article
    肺炎军团菌已被世界卫生组织确定为欧盟所有水传播病原体中最高的健康负担,并且是全球许多疾病爆发的原因。今天,标准分析方法(基于细菌培养在琼脂平板上)需要几天(〜12)在专门的分析实验室产生的结果,不允许及时采取行动防止疫情爆发。在过去的几十年里,已经做出了巨大的努力来开发更有效的水传播病原体诊断和更快的分析方法,需要进一步改进微流体和传感器,快速,准确,便宜,实时,和现场方法。在这里,通过容纳细菌捕获来集成样品制备的芯片实验室装置,裂解,和DNA等温扩增快速(小于3小时)和高度敏感,提出了水样中嗜肺乳杆菌的比色终点检测,在需要的时候使用。该方法基于在芯片上固定和冻干的抗体上选择性捕获活细菌,裂解,DNA的环介导扩增(LAMP),通过颜色变化进行终点检测,肉眼可观察,并通过计算图像分析半量化。竞争优势得到证明,如低试剂消耗,便携性和一次性,颜色变化,储存在RT,并遵守现行法律。
    Legionella pneumophila has been pinpointed by the World Health Organization as the highest health burden of all waterborne pathogens in the European Union and is responsible for many disease outbreaks around the globe. Today, standard analysis methods (based on bacteria culturing onto agar plates) need several days (~12) in specialized analytical laboratories to yield results, not allowing for timely actions to prevent outbreaks. Over the last decades, great efforts have been made to develop more efficient waterborne pathogen diagnostics and faster analysis methods, requiring further advancement of microfluidics and sensors for simple, rapid, accurate, inexpensive, real-time, and on-site methods. Herein, a lab-on-a-chip device integrating sample preparation by accommodating bacteria capture, lysis, and DNA isothermal amplification with fast (less than 3 h) and highly sensitive, colorimetric end-point detection of L. pneumophila in water samples is presented, for use at the point of need. The method is based on the selective capture of viable bacteria on on-chip-immobilized and -lyophilized antibodies, lysis, the loop-mediated amplification (LAMP) of DNA, and end-point detection by a color change, observable by the naked eye and semiquantified by computational image analysis. Competitive advantages are demonstrated, such as low reagent consumption, portability and disposability, color change, storage at RT, and compliance with current legislation.
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