molecular mechanisms

分子机制
  • 文章类型: Journal Article
    感觉神经性听力损失(SNHL),多因素进行性疾病,遗传和环境因素复杂相互作用的结果,其潜在机制尚不清楚。一些病理因素被认为有助于SNHL,包括遗传因素,离子稳态,细胞凋亡,免疫炎症反应,氧化应激,荷尔蒙,代谢综合征,人巨细胞病毒感染,线粒体损伤,和自噬受损。这些因素共同相互作用并在SNHL的发作和进展中起重要作用。本综述全面概述了导致SNHL的各种因素,强调在理解其病因方面的最新进展,并探讨了相关的预防和干预措施。
    Sensorineural hearing loss (SNHL), a multifactorial progressive disorder, results from a complex interplay of genetic and environmental factors, with its underlying mechanisms remaining unclear. Several pathological factors are believed to contribute to SNHL, including genetic factors, ion homeostasis, cell apoptosis, immune inflammatory responses, oxidative stress, hormones, metabolic syndrome, human cytomegalovirus infection, mitochondrial damage, and impaired autophagy. These factors collectively interact and play significant roles in the onset and progression of SNHL. The present review offers a comprehensive overview of the various factors that contribute to SNHL, emphasizes recent developments in understanding its etiology, and explores relevant preventive and intervention measures.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    退变性椎间盘疾病(IVDD)是脊柱外科的主要疾病之一,条件,这显著增加了腰背痛的发生率,并恶化了患者的生活质量,它带来了巨大的社会和经济负担。IVDD的分子病理学是高度复杂和多边的,但仍未完全理解。新发现表明IVDD与炎症密切相关,氧化应激,细胞损伤和细胞外基质代谢失调。症状管理是IVDD采用的主要治疗方法,但它未能解决基本的病理变化和疾病的原因。然而,研究仍集中在基因表达方面的分子方面,试图确定IVDD治疗的特定分子靶标。本文总结了分子理解IVDD发病机制的最新成果,并为临床实践提供循证建议。
    Degenerative intervertebral disc disease (IVDD) is one of the main spinal surgery, conditions, which markedly increases the incidence of low back pain and deteriorates the patient\'s quality of life, and it imposes significant social and economic burdens. The molecular pathology of IVDD is highly complex and multilateral however still not ompletely understood. New findings indicate that IVDD is closely associated with inflammation, oxidative stress, cell injury and extracellular matrix metabolismdysregulation. Symptomatic management is the main therapeutic approach adopted for IVDD, but it fails to address the basic pathological changes and the causes of the disease. However, research is still focusing on molecular aspects in terms of gene expression, growth factors and cell signaling pathways in an attempt to identify specific molecular targets for IVDD treatment. The paper summarizes the most recent achievements in molecularunderstanding of the pathogenesis of IVDD and gives evidence-based recommendations for clinical practice.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    低水平光疗(LLLT),也称为光生物调制(PBM),是一种使用红色或近红外激光器或发光二极管(LED)进行医疗的光学疗法。PBM中涉及的激光波长通常在600-700nm和780-1100nm之间,功率密度范围在5mW/cm2和5W/cm2之间。PBM是生物组织在吸收一定量的光能后表现出的一系列生化级联反应。PBM在过去的20年中在临床实践中得到了广泛的应用,许多临床试验证明了它的生物学功效。然而,基本机制尚未得到充分探索。在本文中,我们总结了过去二十年来对PBM的研究,从分子机制的角度确定PBM生物学效应的重要机制,细胞水平,和组织变化。我们希望我们的研究为未来对潜在机制的研究提供理论基础。
    Low-level light therapy (LLLT), also known as photo biomodulation (PBM), is a type of optical therapy that uses red or near-infrared lasers or light-emitting diodes (LEDs) for medical treatment. The laser wavelengths involved in PBM typically range between 600-700 nm and 780-1100 nm, with power densities ranging between 5 mW/cm2 and 5 W/cm2. PBM is a series of biochemical cascades exhibited by biological tissues after absorbing a certain amount of energy from light. PBM has been widely used in clinical practice in the past 20 years, and numerous clinical trials have demonstrated its biological efficacy. However, the underlying mechanisms have not yet been fully explored. In this paper, we have summarized the research into PBM over the past two decades, to identify the important mechanisms of the biological effects of PBM from the perspective of molecular mechanisms, cellular levels, and tissue changes. We hope our study provide a theoretical basis for future investigations into the underlying mechanisms.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    随机皮瓣在创面修复中的临床应用一直是研讨的课题。由于在转移手术过程中缺乏明确的血管供血,随机皮瓣容易坏死。他们的临床应用受到限制,由于这种限制,给患者带来了经济和心理负担。随机皮瓣的存活取决于缺血再灌注损伤等因素,氧化应激,局部炎症反应,和新血管形成。这篇综述旨在概述支持在临床实践中使用随机皮瓣的证据。此外,这篇综述探讨了不同药物对皮瓣局部微循环内信号通路的影响,并研究了这些通路之间的相互联系。
    The clinical application of random flaps in wound repair has been a topic of discussion. Random flaps are prone to necrosis due to the lack of well-defined vascular blood supply during transfer surgery. Their clinical utility is restricted, financial and psychological burdens is imposed on patients due to this limitation. The survival of random skin flaps depends on factors such as ischemia-reperfusion injury, oxidative stress, local inflammatory response, and neovascularization. This review aims to provide an overview of the evidence supporting the use of random flaps in clinical practice. In addition, this review explores the impact of different medications on signaling pathways within the flap\'s local microcirculation and investigates the interconnections between these pathways.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    科罗卡西亚(L.)肖特是一种块茎植物,也被称为芋,因其著名的营养特性而在全球范围内用作食品,但传统上也在几个国家用于医疗目的。在这项研究中,甲醇提取物是从哥伦比亚的球茎和叶子中制备的,随后通过分子排阻层析(RP-HPLC)进行分级,并在胃腺癌(AGS细胞)的体外模型中评估其抗肿瘤活性。Vorm提取物和分离的组分II和III通过调节参与细胞增殖的关键蛋白以剂量依赖的方式影响AGS细胞活力,凋亡,和细胞周期过程,如胱天蛋白酶3,细胞周期蛋白A,cdk2,Ikbα,和ERK.为了鉴定负责抗肿瘤活性的生物活性分子,通过RP-HPLC进一步纯化级分II和III,并通过核磁共振(NMR)和电喷雾质谱(ESI-MS)技术表征。该程序使十种化合物的鉴定,包括木脂素和新木脂素,有些人第一次在芋里被隔离,不常见的megastigmane衍生物,和没食子酸衍生物。然而,没有一种分离的成分显示出与部分和总提取物相当的功效。这表明整个Colocasia植物复合物对胃癌具有有趣的抗肿瘤活性。
    Colocasia esculenta (L.) Schott is a tuberous plant, also known as taro, employed as food worldwide for its renowned nutritional properties but also traditionally used in several countries for medical purposes. In this study, methanolic extracts were prepared from the corms and leaves of Colocasia, subsequently fractionated via molecular exclusion chromatography (RP-HPLC) and their anti-tumor activity assessed in an in vitro model of gastric adenocarcinoma (AGS cells). Vorm extract and isolated fractions II and III affected AGS cell vitality in a dose-dependent manner through the modulation of key proteins involved in cell proliferation, apoptosis, and cell cycle processes, such as caspase 3, cyclin A, cdk2, IkBα, and ERK. To identify bioactive molecules responsible for anti-tumoral activity fractions II and III were further purified via RP-HPLC and characterized via nuclear magnetic resonance (NMR) and electrospray mass spectrometry (ESI-MS) techniques. The procedure enabled the identification of ten compounds including lignans and neolignans, some isolated for the first time in taro, uncommon megastigmane derivatives, and a gallic acid derivative. However, none of the isolated constituents showed efficacy equivalent to that of the fractions and total extract. This suggests that the whole Colocasia phytocomplex has intriguing anti-tumor activity against gastric cancer.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    痴呆是导致老年人残疾的重要原因,而阿尔茨海默病(AD)是痴呆的最常见形式。作为AD的早期阶段,与轻度认知障碍(MCI)和重金属相关的机制尚不清楚。本研究采用横断面设计,招募了514名北京老年人,中国。通过迷你精神状态检查(MMSE)评估认知功能,并通过电感耦合等离子体质谱法(ICP-MS)测量14种血液金属。在调整后的单金属模型中,我们观察到铜[铜,β(95%CI):3.73(-6.42,-1.03)]和铅[Pb,β(95%CI):0.79(-1.26,-0.32)]显示与认知功能呈负相关,而硒[Se,β(95%CI):2.97(1.23,4.70)]对认知有益。我们的发现在使用多金属模型的二次分析中是稳健的,其中包括广义线性模型(GLM),贝叶斯核机回归(BKMR),和分位数g计算(qgcomp)。此外,有毒金属混合物(Cu和Pb)与MMSE评分呈显着的负相关,并且在金属混合物中包含Se会减弱Cu-Pb混合物的神经毒性。计算机模拟分析用于检查潜在的分子机制(基因,生物过程,通路,和疾病)金属混合物之间的相互作用。我们确定了20个与Cu-Pb和Se相关的认知相关基因。在这些基因中,八(APOE,APP,巴克斯,BDNF,CASP3,HMOX1,TF,和TPP1)对蛋白质活性表现出相反的作用,mRNA表达,或响应Se和Cu/Pb暴露的蛋白质表达,这可能是解释硒抗神经毒性作用的关键基因。我们的发现支持硒可以减弱暴露于单一铜或铅的神经毒性,和Cu-Pb混合物。需要更多的研究来证实我们的发现,并获得有关联合金属暴露对认知功能的分子机制的知识。
    Dementia is a significant cause of elderly disability and Alzheimer\'s disease (AD) is the most prevalent form of dementia. As an early stage of AD, the mechanism related to mild cognitive impairment (MCI) and heavy metals is still unclear. This study utilized a cross-sectional design and enrolled 514 older adults in Bejing, China. Cognitive function was assessed by the Mini-Mental State Examination (MMSE) and fourteen blood metals were measured by inductively coupled plasma mass spectrometry (ICP-MS). In the adjusted single-metal models, we observed that copper [Cu, β (95% CI): 3.73 (-6.42, -1.03)] and lead [Pb, β (95% CI): 0.79 (-1.26, -0.32)] demonstrated negative associations with cognitive function, while selenium [Se, β (95% CI): 2.97 (1.23, 4.70)] was beneficial to cognition. Our findings were robust in secondary analysis using multi-metal models, which included generalized linear models (GLM), Bayesian kernel machine regression (BKMR), and quantile g-computation (qgcomp). Moreover, the toxic metal mixture (Cu and Pb) exhibited a significant negative association with MMSE scores and the inclusion of Se in the metal mixture attenuated the neurotoxicity of Cu-Pb mixture. The in silico analysis was used to examine the potential molecular mechanisms (genes, biological processes, pathways, and illnesses) of interaction among metal mixtures. We identified 20 cognition-related genes that are associated with both Cu-Pb and Se. Among these genes, eight (APOE, APP, BAX, BDNF, CASP3, HMOX1, TF, and TPP1) exhibited opposite effects on protein activity, mRNA expression, or protein expression in response to Se and Cu/Pb exposure, which could be the key genes accounting for the anti-neurotoxic effects of Se. Our findings support that Se can attenuate the neurotoxicity of exposure to single Cu or Pb, and Cu-Pb mixture. More research is needed to confirm our findings and gain knowledge about the molecular mechanisms of combined metal exposure on cognitive function.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    急性胰腺炎(AP)是一种急性炎症性胃肠道疾病,在过去的几年里,这种疾病的死亡率和死亡率一直在上升。亚精胺,一种天然多胺,具有广泛的药理作用,包括抗炎,抗氧化,抗衰老,和抗肿瘤。本研究旨在探讨亚精胺治疗AP的可靠靶点及分子机制。通过采用包括网络药理学在内的计算生物学方法,分子对接,和分子动力学(MD)模拟,我们探讨了亚精胺在膳食补充剂改善AP方面的潜在作用靶点.计算生物学结果表明,亚精胺具有高度(度:18,介数:38.91;度:18,介数:206.41)和稳定的结合自由能(ΔGbind:-12.81±0.55kcal/mol,-15.00±1.00kcal/mol)与乙酰胆碱酯酶(AchE)和5-羟色胺转运蛋白(5-HTT)。实验验证表明亚精胺处理可以降低胰腺腺泡细胞的坏死和AchE活性。细胞热转移分析(CETSA)结果表明,亚精胺可以结合并稳定腺泡细胞中的5-HTT蛋白。此外,亚精胺治疗阻碍了5-HTT在caerulein诱导的急性胰腺炎小鼠胰腺组织中的表达升高。总之,5-羟色胺转运体可能是亚精胺治疗AP的可靠靶点。本研究为探索天然化合物的潜在靶标提供了新思路。
    Acute pancreatitis (AP) is an acute inflammatory gastrointestinal disease, the mortality and morbility of which has been on the increase in the past years. Spermidine, a natural polyamine, has a wide range of pharmacological effects including anti-inflammation, antioxidation, anti-aging, and anti-tumorigenic. This study aimed to investigate the reliable targets and molecular mechanisms of spermidine in treating AP. By employing computational biology methods including network pharmacology, molecular docking, and molecular dynamics (MD) simulations, we explored the potential targets of spermidine in improving AP with dietary supplementation. The computational biology results revealed that spermidine had high degrees (degree: 18, betweenness: 38.91; degree: 18, betweenness: 206.41) and stable binding free energy (ΔGbind: - 12.81 ± 0.55 kcal/mol, - 15.00 ± 1.00 kcal/mol) with acetylcholinesterase (AchE) and serotonin transporter (5-HTT). Experimental validation demonstrates that spermidine treatment could reduce the necrosis and AchE activity in pancreatic acinar cells. Cellular thermal shift assay (CETSA) results revealed that spermidine could bind to and stabilize the 5-HTT protein in acinar cells. Moreover, spermidine treatment impeded the rise of the expression of 5-HTT in pancreatic tissues of caerulein induced acute pancreatitis mice. In conclusion, serotonin transporter might be a reliable target of spermidine in treating AP. This study provides new idea for the exploration of potential targets of natural compounds.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    计算模型已成为研究涉及生物系统和疾病的复杂分子过程的关键工具。在这项研究中,我们应用布尔建模来揭示帕金森病(PD)的分子机制,最常见的神经退行性疾病之一。我们的方法是基于PD地图,一个全面的分子相互作用图,捕捉参与PD的启动和进展的关键机制。使用布尔建模,我们的目标是更深入地了解疾病的动态,确定潜在的药物靶标,并模拟对治疗的反应。我们的分析证明了这种方法在揭示PD复杂性方面的有效性。我们的结果证实了对该疾病的现有知识,并提供了对潜在机制的有价值的见解,最终提出治疗干预的潜在目标。此外,我们的方法允许我们根据组学数据对模型进行参数化,以便进一步进行疾病分层.我们的研究强调了计算建模在促进我们对复杂生物系统和疾病的理解方面的价值,强调在这一领域继续研究的重要性。此外,我们的发现对PD新疗法的开发具有潜在的意义,这是一个紧迫的公共卫生问题。总的来说,这项研究代表了将计算模型应用于神经退行性疾病研究的重要一步,并强调了跨学科方法在解决具有挑战性的生物医学问题方面的力量。
    Computational modeling has emerged as a critical tool in investigating the complex molecular processes involved in biological systems and diseases. In this study, we apply Boolean modeling to uncover the molecular mechanisms underlying Parkinson\'s disease (PD), one of the most prevalent neurodegenerative disorders. Our approach is based on the PD-map, a comprehensive molecular interaction diagram that captures the key mechanisms involved in the initiation and progression of PD. Using Boolean modeling, we aim to gain a deeper understanding of the disease dynamics, identify potential drug targets, and simulate the response to treatments. Our analysis demonstrates the effectiveness of this approach in uncovering the intricacies of PD. Our results confirm existing knowledge about the disease and provide valuable insights into the underlying mechanisms, ultimately suggesting potential targets for therapeutic intervention. Moreover, our approach allows us to parametrize the models based on omics data for further disease stratification. Our study highlights the value of computational modeling in advancing our understanding of complex biological systems and diseases, emphasizing the importance of continued research in this field. Furthermore, our findings have potential implications for the development of novel therapies for PD, which is a pressing public health concern. Overall, this study represents a significant step forward in the application of computational modeling to the investigation of neurodegenerative diseases, and underscores the power of interdisciplinary approaches in tackling challenging biomedical problems.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    β淀粉样蛋白(Aβ)原纤维与阿尔茨海默病密切相关。在存在或不存在Aβ纤维化抑制剂的情况下,它们的行为已通过分子动力学模拟进行了深入研究。在这项工作中,探讨了甘草查尔酮A和甘草查尔酮B对Aβ(1-42)原纤维不稳定的分子机制。发现两种甘草茶碱都可以使Aβ(1-42)原原纤维的构型紊乱。能够形成Aβ(1-42)原原纤维与氯查尔酮A或氯查尔酮B之间的稳定相互作用。在存在LogochalconeA或LogochalconeB的情况下,观察到Aβ(1-42)原原纤维的β-折叠结构含量的降低和无规卷曲结构的增加。此外,Aβ(1-42)原纤与甘草查尔酮A的范德华相互作用对结合自由能有重要贡献,而Aβ(1-42)原原纤维与甘草查尔酮B之间的静电相互作用在结合亲和力中的贡献更为突出。我们的工作可能有助于开发破坏Aβ原原纤维的新药。
    Amyloid-beta (Aβ) protofibrils are closely related to Alzheimer\'s disease. Their behaviors with or without the presence of Aβ fibrillization inhibitors have been intensively studied by molecular dynamics simulations. In this work, the molecular mechanisms of licochalcone A and licochalcone B on destabilizing Aβ(1-42) protofibrils are explored. It is found that both two licochalcones can disorder the configuration of the Aβ(1-42) protofibril. The stable interactions between the Aβ(1-42) protofibril and licochalcone A or licochalcone B are able to be formed. A reduction of the β-sheet structure contents and an increment of the random coil structures of Aβ(1-42) protofibril are observed in the presence of either licochalcone A or licochalcone B. The hydrogen bonds inside the Aβ(1-42) protofibril could be partially collapsed to varying degrees by two licochalcones. Furthermore, the van der Waals interactions between Aβ(1-42) protofibril and licochalcone A make an important contribution to the binding free energy, while the contribution of the electrostatic interactions between Aβ(1-42) protofibril and licochalcone B is more prominent in the binding affinity. Our work may help in the development of new drug candidates for disrupting the Aβ protofibril.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    反式激活反应元件DNA结合蛋白43(TDP-43)的致病突变与肌萎缩侧索硬化症(ALS)密切相关。最近有报道称,TDP-43307-319肽的两个ALS相关家族突变体A315T和A315E可以自组装成包括四聚体在内的寡聚体,hexamers,和八位字节,其中六聚体被建议形成β-桶结构。然而,由于低聚物的短暂性,它们的构象特性和β桶形成背后的原子机制在很大程度上仍然难以捉摸。在这里,我们通过使用溶质回火2模拟进行全原子显式溶剂副本交换,研究了野生型(WT)TDP-43307-319片段及其A315T和A315E突变体的六聚体构象分布。我们的模拟表明,每种肽都可以自组装成不同的构象,包括有序的β-桶,双层β-折叠和/或单层β-折叠,和无序的复合体。A315T和A315E突变体显示出比WT更高的形成β-桶结构的倾向,这为先前报道的它们增强的神经毒性提供了原子解释。详细的相互作用分析显示A315T和A315E突变增加分子间相互作用。此外,由三种不同的肽形成的β-桶结构通过不同的肽间侧链氢键稳定,疏水,和芳香堆积相互作用。这项研究证明了致病性A315T和A315E突变增强了TDP-43307-319六聚体的β桶形成,并揭示了潜在的分子决定因素,这可能有助于深入了解ALS突变引起的TDP-43蛋白的神经毒性。
    Pathogenic mutations of transactivation response element DNA-binding protein 43 (TDP-43) are closely linked with amyotrophic lateral sclerosis (ALS). It was recently reported that two ALS-linked familial mutants A315T and A315E of TDP-43307-319 peptides can self-assemble into oligomers including tetramers, hexamers, and octamers, among which hexamers were suggested to form the β-barrel structure. However, due to the transient nature of oligomers, their conformational properties and the atomic mechanisms underlying the β-barrel formation remain largely elusive. Herein, we investigated the hexameric conformational distributions of the wild-type (WT) TDP-43307-319 fragment and its A315T and A315E mutants by performing all-atom explicit-solvent replica exchange with solute tempering 2 simulations. Our simulations reveal that each peptide can self-assemble into diverse conformations including ordered β-barrels, bilayer β-sheets and/or monolayer β-sheets, and disordered complexes. A315T and A315E mutants display higher propensity to form β-barrel structures than the WT, which provides atomic explanation for their enhanced neurotoxicity reported previously. Detailed interaction analysis shows that A315T and A315E mutations increase inter-molecular interactions. Also, the β-barrel structures formed by the three different peptides are stabilized by distinct inter-peptide side-chain hydrogen bonding, hydrophobic, and aromatic stacking interactions. This study demonstrates the enhanced β-barrel formation of the TDP-43307-319 hexamer by the pathogenic A315T and A315E mutations and reveals the underlying molecular determinants, which may be helpful for in-depth understanding of the ALS-mutation-induced neurotoxicity of TDP-43 protein.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

公众号