Antimicrobial resistance

抗菌素耐药性
  • 文章类型: Journal Article
    在过去的十年中,药房部门的政策,学术和专业领域越来越引起人们的注意,可以更好地利用社区药学部门尚未开发的潜力,为全球减少抗菌素耐药性(AMR)的努力做出贡献.虽然努力在训练中,进展缓慢。
    从该领域的全球专家那里获得见解,以确定广泛的未来潜在政策方向,以支持社区药剂师参与抗菌药物管理(AMS)。
    改进的Delphi技术,包括两轮调查,以在全球社区药房部门利益相关者和意见领袖之间建立共识。在第一轮中,参与者在政策设计的三个领域中对28项声明进行了评估,实现设计,监测和评估。还邀请参与者在第一轮中提供反馈,这在第二轮中反映为新的声明(n=10)。在第二轮中,要求参与者根据小组共识重新评估第一轮声明,并对新声明进行评级。
    289名参与者被邀请参加。48/289(17%的响应率)完成了第1轮,25/42(60%的响应率)完成了第2轮。在三个领域的79%(n=30)的陈述中达成了共识(定义为>70%的一致性)。
    制药行业专家一致认为,承认社区药剂师参与AMS国家行动计划是一个重要组成部分,标志着该部门对全国AMS努力的贡献的认可。达成共识的实施组件反映了行业向专业服务驱动模式的演变,特别是在包括感染预防和控制措施在内的补充AMS计划中。需要根据具体情况进行调整,以支持实施这些AMS措施,除了取得适当的平衡,以支持增加社区药剂师参与AMS的步伐,并建立整体的专业支持。
    UNASSIGNED: Over the past decade, the pharmacy sector\'s policy, academic and professional spheres have increasingly drawn attention to the opportunities to better leverage the untapped potential of the community pharmacy sector in contributing to global efforts to reduce antimicrobial resistance (AMR). While efforts are in train, progress is slow.
    UNASSIGNED: To draw insights from global experts in the field to identify a broad range of potential future policy directions to support community pharmacists\' involvement in antimicrobial stewardship (AMS).
    UNASSIGNED: A modified Delphi technique, comprising two survey rounds to build consensus amongst global community pharmacy sector stakeholders and opinion leaders. In Round 1, participants rated their level of agreement with 28 statements across the three domains of policy design, implementation design, and monitoring and evaluation. Participants were also invited to contribute feedback in Round 1, which was reflected as new statements (n = 10) in Round 2. In Round 2, participants were asked to re-assess Round 1 statements in view of the group consensus and to rate the new statements.
    UNASSIGNED: 289 participants were invited to participate. 48/289 (17% response rate) completed Round 1, and 25/42 (60% response rate) completed Round 2. Consensus (defined as >70% agreement) was achieved for 79% (n = 30) of the statements across the three domains.
    UNASSIGNED: Pharmacy sector experts agreed that acknowledging community pharmacists in AMS national action plans is an important component, signalling a recognition of the sector\'s contribution to whole-of-nation AMS efforts. Implementation components that achieved consensus reflect the profession\'s evolution to a professional service driven model, particularly in complementary AMS initiatives including infection prevention and control measures. Context-specific adjustments to support implementing these AMS measures will be required, in addition to striking the appropriate balance to support the pace of increased community pharmacists\'involvement in AMS with building whole-of-profession buy-in.
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  • 文章类型: Journal Article
    目的:我们的目的是根据社区获得性大肠埃希菌尿路感染(UTI)患者在过去18个月内的抗生素暴露情况,量化个体对抗菌药物耐药的风险。
    方法:2015-2017年在两个中心前瞻性招募了法国患者。分离株对阿莫西林(AMX)的耐药性,阿莫西林-克拉维酸(AMC),第三代头孢菌素(3GC),甲氧苄啶-磺胺甲恶唑(TMP-SMX),氟喹诺酮类(FQ)和磷霉素(FOS)根据健康保险文件中记录的以前的类内和类间抗生素暴露进行分析.
    结果:在所分析的722例UTI病例(564例)中,有588例(81.4%)发现了以前的抗生素暴露。与远程暴露(UTI前18个月)相比,最近的暴露(UTI前3个月)对AMX的大肠杆菌耐药性具有更强的类内影响,AMC,FQ和TMP-SMX,相应的调整后赔率比[95%置信区间]为1.63[1.20-2.21],1.59[1.02-2.48],3.01[1.90-4.77],和2.60[1.75-3.87]。AMX,FQ,TMP-SMX也表现出显著的类间影响。对3GC的抗性与组内暴露没有显着相关(调整后的OR:0.88[0.41-1.90])。FOS抗性显著低(0.4%)。耐药性风险降至10%以下所需的无抗生素期持续时间,在UTI中经验使用的阈值,被建模为3GC<1个月,AMX和TMP-SMX>18个月,AMC(5.2个月[2.3至>18])和FQ(17.4个月[7.4至>18])不确定。
    结论:引起UTI的E.coli的耐药性部分可以通过以前的个人抗生素使用来预测。
    OBJECTIVE: We aimed to quantify the individual risk of antimicrobial resistance among patients with community-acquired Escherichia coli urinary tract infection (UTI) according to their antibiotic exposure over the previous 18 months.
    METHODS: French patients were prospectively recruited in two centers in 2015-2017. Resistance of isolates to amoxicillin (AMX), amoxicillin-clavulanate (AMC), third-generation cephalosporins (3GC), trimethoprim-sulfamethoxazole (TMP-SMX), fluoroquinolones (FQ) and fosfomycin (FOS) was analysed according to previous intra-class and inter-class antibiotic exposure documented in health insurance files.
    RESULTS: Previous antibiotic exposure was found in 588 (81.4 %) of the 722 UTI cases analysed (564 patients). Recent exposure (three months before UTI) was associated with stronger intra-class impact on E. coli resistance compared to remote exposure (18 months before UTI) for AMX, AMC, FQ and TMP-SMX, with respective adjusted odds ratios [95 % confidence interval] of 1.63 [1.20-2.21], 1.59 [1.02-2.48], 3.01 [1.90-4.77], and 2.60 [1.75-3.87]. AMX, FQ, and TMP-SMX also showed significant inter-class impact. Resistance to 3GC was not significantly associated with intraclass exposure (adjusted OR: 0.88 [0.41-1.90]). FOS resistance was remarkably low (0.4 %). Duration of the antibiotic-free period required for resistance risk to drop below 10 %, the threshold for empirical use in UTI, was modelled as < 1 month for 3GC, >18 months for AMX and TMP-SMX and uncertain for AMC (5.2 months [2.3 to > 18]) and FQ (17.4 months [7.4 to > 18]).
    CONCLUSIONS: Resistance of E. coli causing UTI is partially predicted by previous personal antibiotic delivery.
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  • 文章类型: Journal Article
    淋病奈瑟菌可以通过水平基因转移(HGT)从其他奈瑟菌获得抗菌素耐药性(AMR)。例如亚黄奈瑟氏菌等共生体。食物中低剂量的抗微生物剂可以选择N.subflava中的AMR,然后可以转移到淋病奈瑟菌。在这项研究中,我们的目的是确定能够诱导环丙沙星耐药的环丙沙星的最低浓度(最低选择浓度-MSC)。在这项研究中,在淋球菌(GC)培养基琼脂平板上连续传代,其中环丙沙星的浓度范围为1:100至1:10,000,低于其环丙沙星MIC(0.006µg/mL),持续6天。环丙沙星浓度为MIC的1/100时连续传代6天后,24个菌落出现在含有0.06µg/mL环丙沙星的平板上,对应于淋病奈瑟菌的EUCAST断点。他们的环丙沙星MIC在0.19至0.25微克/毫升之间,全基因组测序显示gyrA基因有一个错义突变T91I,先前已发现可降低对氟喹诺酮类药物的敏感性。N.subflavaMSCdenovo被确定为0.06ng/mL(0.00006µg/mL),比环丙沙星MIC低100倍。这一发现的含义是,在某些环境样品中发现低浓度的氟喹诺酮类药物,比如土壤,河水,甚至我们吃的食物,可以选择亚黄奈瑟菌对环丙沙星的耐药性。
    Neisseria gonorrhoeae can acquire antimicrobial resistance (AMR) through horizontal gene transfer (HGT) from other Neisseria spp. such as commensals like Neisseria subflava. Low doses of antimicrobials in food could select for AMR in N. subflava, which could then be transferred to N. gonorrhoeae. In this study, we aimed to determine the lowest concentration of ciprofloxacin that can induce ciprofloxacin resistance (minimum selection concentration-MSC) in a N. subflava isolate (ID-Co000790/2, a clinical isolate collected from a previous community study conducted at ITM). In this study, Neisseria subflava was serially passaged on gonococcal (GC) medium agar plates containing ciprofloxacin concentrations ranging from 1:100 to 1:10,000 below its ciprofloxacin MIC (0.006 µg/mL) for 6 days. After 6 days of serial passaging at ciprofloxacin concentrations of 1/100th of the MIC, 24 colonies emerged on the plate containing 0.06 µg/mL ciprofloxacin, which corresponds to the EUCAST breakpoint for N. gonorrhoeae. Their ciprofloxacin MICs were between 0.19 to 0.25 µg/mL, and whole genome sequencing revealed a missense mutation T91I in the gyrA gene, which has previously been found to cause reduced susceptibility to fluoroquinolones. The N. subflava MSCde novo was determined to be 0.06 ng/mL (0.00006 µg/mL), which is 100×-fold lower than the ciprofloxacin MIC. The implications of this finding are that the low concentrations of fluoroquinolones found in certain environmental samples, such as soil, river water, and even the food we eat, may be able to select for ciprofloxacin resistance in N. subflava.
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  • 文章类型: Journal Article
    背景:由于癌症本身及其治疗引起的免疫抑制,癌症患者易受感染。抗微生物抗性细菌的出现进一步使感染的治疗复杂化并增加死亡率和住院时间。本研究旨在调查微生物谱,抗菌素耐药性模式,危险因素,以及它们对这些患者临床结局的影响。
    方法:一项前瞻性研究在Patna的三级癌症医院进行,比哈尔邦,印度,其中包括18岁及以上微生物培养阳性的癌症患者。
    结果:这项研究分析了440名患者,其中53%(234)是女性,平均年龄49.27(±14.73)岁。共鉴定出541株分离株,其中48.01%(242)为多重耐药(MDR),29.76%(150)存在广泛耐药(XDR),敏感率为19.84%(112)。这项研究表明,接受手术的患者,化疗,住院了,有抗生素暴露史,并且有严重的中性粒细胞减少更容易受到MDR和XDR感染。平均住院时间为16.90(±10.23),18.30(±11.14),敏感患者为22.83(±13.22)天,MDR,和XDR感染,分别。该研究还显示,30天的总体死亡率为31.81%(140),而MDR和XDR组的30天死亡率分别为38.92%和50.29%(P<0.001)。确定可能导致死亡的危险因素,癌症复发,脓毒症,化疗,留置侵入性装置,如Foley导管,中心静脉导管和莱尔管,MASCC评分(<21)和肺炎。
    结论:本研究强调对癌症患者进行个性化干预的必要性,例如确定有感染风险的患者,明智的抗生素使用,感染控制措施,以及实施抗菌药物管理计划,以降低抗菌药物耐药感染率和相关死亡率以及住院时间。
    BACKGROUND: Cancer patients are vulnerable to infections due to immunosuppression caused by cancer itself and its treatment. The emergence of antimicrobial-resistant bacteria further complicates the treatment of infections and increases the mortality and hospital stays. This study aimed to investigate the microbial spectrum, antimicrobial resistance patterns, risk factors, and their impact on clinical outcomes in these patients.
    METHODS: A prospective study was conducted at a tertiary care cancer hospital in Patna, Bihar, India, which included cancer patients aged 18 years and older with positive microbial cultures.
    RESULTS: This study analysed 440 patients, 53% (234) of whom were females, with an average age of 49.27 (± 14.73) years. A total of 541 isolates were identified, among which 48.01% (242) were multidrug resistant (MDR), 29.76% (150) were extensively drug resistant (XDR), and 19.84% (112) were sensitive. This study revealed that patients who underwent surgery, chemotherapy, were hospitalized, had a history of antibiotic exposure, and had severe neutropenia were more susceptible to MDR and XDR infections. The average hospital stays were 16.90 (± 10.23), 18.30 (± 11.14), and 22.83 (± 13.22) days for patients with sensitive, MDR, and XDR infections, respectively. The study also revealed overall 30-day mortality rate of 31.81% (140), whereas the MDR and XDR group exhibited 38.92% and 50.29% rates of 30-day mortality respectively (P < 0.001). Possible risk factors identified that could lead to mortality, were cancer recurrence, sepsis, chemotherapy, indwelling invasive devices such as foley catheter, Central venous catheter and ryles tube, MASCC score (< 21) and pneumonia.
    CONCLUSIONS: This study emphasizes the necessity for personalized interventions among cancer patients, such as identifying patients at risk of infection, judicious antibiotic use, infection control measures, and the implementation of antimicrobial stewardship programs to reduce the rate of antimicrobial-resistant infection and associated mortality and hospital length of stay.
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  • 文章类型: Journal Article
    背景:静脉注射磷霉素(iv-FOS)的作用,作为革兰氏阴性菌血流感染(GNB-BSI)联合治疗的一部分,需要在临床实践中进行评估,因为体外数据显示了潜在的疗效。
    方法:从1月1日起,所有连续患有GNB-BSI的患者,2021年至4月1日2023年,包括。主要结果是30天死亡率。Cox回归分析用于确定死亡率的预测因子。此外,我们还进行了治疗加权逆概率(IPTW)分析.
    结果:总体而言,纳入363例患者:211例(58%)男性,年龄中位数(q1-q3)为68(57-78)岁,Charlson-合并症指数中位数为5(3-7)。在GNB-BSI发作时,中位SOFA评分为5(2-7),122(34%)出现感染性休克。涉及的病原体主要是肺炎克雷伯菌(42%),大肠杆菌(28%),和铜绿假单胞菌(17%);其中36%对碳青霉烯耐药。治疗包括碳青霉烯类(40%),头孢菌素(37%)和β-内酰胺/β-内酰胺酶抑制剂(19%);98例(27%)病例中使用了静脉内FOS,中位剂量为每天16(16-18)gr。使用静脉FOS与降低粗死亡率无关(21%vs29%,p值=0.147)。然而,在多变量Cox回归联合治疗与iv-FOS导致保护死亡率(aHR=0.51,95CI=0.28-0.92),而不是其他组合疗法(HR=0.69,95CI=0.44-1.16)。该结果也在IPTW调整的Cox模型中得到证实(aHR=0.52,95CI=0.31-0.91)。亚组分析显示,严重感染(SOFA>6,PITT≥4)和在GNB-BSI发病后24小时内开始iv-FOS时获益。
    结论:磷霉素联合治疗GNB-BSI可能具有提高生存率的作用。这些结果证明了进一步临床试验的发展。
    BACKGROUND: The role of intravenous fosfomycin (iv-FOS), as a part of combination therapy for Gram-negative bacteria bloodstream infections (GNB-BSI), needs to be evaluated in clinical practice as in vitro data show a potential efficacy.
    METHODS: All consecutive patients with a GNB-BSI from January 1st, 2021, to April 1st, 2023, were included. Primary outcome was 30-day mortality. A Cox- regression analysis was used to identify predictors of mortality. Moreover, an inverse-probability of treatment-weighting (IPTW) analysis was also performed.
    RESULTS: Overall, 363 patients were enrolled: 211 (58%) males, with a median (q1-q3) age of 68 (57-78) years, and a median Charlson-comorbidity index of 5 (3-7). At GNB-BSI onset, median SOFA score was 5 (2-7), 122 (34%) presented with septic shock. Pathogens involved were principally K. pneumoniae (42%), E. coli (28%), and P. aeruginosa (17%); of them 36% were carbapenem-resistant. The therapy included carbapenems (40%), cephalosporins (37%) and beta-lactams/beta-lactamases-inhibitors (19%); combination with iv-FOS was used in 98 (27%) cases at a median dosage of 16 (16-18) gr/daily. Use of iv-FOS was not associated with reduced crude mortality (21% vs 29%, p-value=0.147). However, at multivariable Cox-regression combination therapy with iv-FOS resulted protective for mortality (aHR=0.51, 95%CI=0.28-0.92), but not other combo-therapies (HR=0.69, 95%CI=0.44-1.16). This result was also confirmed at the IPTW-adjusted-Cox-model (aHR=0.52, 95%CI=0.31-0.91). Subgroup analysis suggested a benefit in severe infections (SOFA>6, PITT≥4) and when iv-FOS was initiated within 24 hours from GNB-BSI onset.
    CONCLUSIONS: Fosfomycin in combination therapy for GNB-BSI may have a role to improve survival. These results justify the development of further clinical trials.
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  • 文章类型: Journal Article
    背景:信息系统的数字化允许自动测量抗菌剂的消耗量(AMC),在不影响患者安全的情况下,帮助解决因不适当药物使用而产生的抗生素耐药性。
    目的:描述并描述一种用于重症监护病房(ICU)的新的自动AMC监视服务,根据转诊诊所的数据进行分层,并与个体患者的危险因素相关联,疾病严重程度,和死亡率。
    方法:开发了一种从电子病历中收集数据的自动化服务,已实施,并在瑞典北部的医疗保健地区进行了验证。我们从2018年1月1日至2021年12月31日进行了一项观察性研究,包括对所有≥18岁的人群的一般ICU护理,在二级护理和三级护理的流域人口分别为270000和900000。我们使用描述性分析将ICU人群特征与AMC结果随着时间的推移联系起来,包括治疗天数(DOT),治疗的长度,定义的每日剂量,和死亡率。
    结果:5190例患者中,有5608例入院,中位年龄为65岁(IQR48-75),女性占41.2%。30天死亡率为18.3%。总AMC为1177个DOT,二级和1261个DOT,每1000个患者天和三级护理。AMC在转诊诊所之间差异很大,在接受三级护理的810例普外科手术中,每1000例患者天1486例DOT的总入院人数最高。在COVID-19波期间,病例混合对AMC的影响很明显,这突出了需要考虑病例混合。暴露于三种以上抗菌药物类别(N=242)的患者30天死亡率为40.6%,根据入院分数,他们的预期比率存在显著差异。
    结论:我们引入了一项新的服务和说明,用于自动化本地ICU-AMC数据收集。提出了通用的长期ICU-AMC指标,涵盖患者因素,转诊诊所和死亡率结果,有望有利于完善抗菌药物的使用。
    BACKGROUND: The digitalization of information systems allows automatic measurement of antimicrobial consumption (AMC), helping address antibiotic resistance from inappropriate drug use without compromising patient safety.
    OBJECTIVE: Describe and characterize a new automated AMC surveillance service for intensive care units (ICUs), with data stratified by referral clinic and linked with individual patient risk factors, disease severity, and mortality.
    METHODS: An automated service collecting data from the electronic medical record was developed, implemented, and validated in a healthcare region in northern Sweden. We performed an observational study from January 1, 2018, to December 31, 2021, encompassing general ICU care for all ≥18-years-olds in a catchment population of 270000 in secondary care and 900000 in tertiary care. We used descriptive analyses to associate ICU population characteristics with AMC outcomes over time, including days of therapy (DOT), length of therapy, defined daily doses, and mortality.
    RESULTS: There were 5608 admissions among 5190 patients with a median age of 65 (IQR 48-75) years, 41.2% females. The 30-day mortality was 18.3%. Total AMC was 1177 DOTs in secondary and 1261 DOTs per 1000 patient days and tertiary care. AMC varied significantly among referral clinics, with the highest total among 810 general surgery admissions in tertiary care at 1486 DOTs per 1000 patient days. Case-mix effects on the AMC were apparent during COVID-19 waves highlighting the need to account for case-mix. Patients exposed to more than three antimicrobial drug classes (N = 242) had a 30-day mortality rate of 40.6%, with significant variability in their expected rates based on admission scores.
    CONCLUSIONS: We introduce a new service and instructions for automating local ICU-AMC data collection. The versatile long-term ICU-AMC metrics presented, covering patient factors, referral clinics and mortality outcomes, are expected to be beneficial in refining antimicrobial drug use.
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  • 文章类型: Journal Article
    目的:为了研究抗菌药的遗传特征和耐药性,包括主要的β-内酰胺抗生素抗性基因,在累西腓-PE三级医院分离的鲍曼不动杆菌中,巴西,在后COVID-19大流行期间。
    结果:A.鲍曼不动杆菌分离株在2023年至2024年间从不同的临床样本中收集。抗菌素耐药性测试遵循标准化方案,通过PCR和测序检测β-内酰胺酶编码基因。还对blaOXA-碳青霉烯酶和blaADC基因上游的ISAba1进行了调查。通过ERIC-PCR评估遗传多样性。在78个鲍曼不动杆菌中,对多种抗菌药物的广泛耐药是显而易见的。各种获得的β-内酰胺酶编码基因(blaOXA-23,-24,-58,-143,blaVIM,和blaNDM)被检测到。此外,这是blaVIM-2在巴西携带blaOXA-23-样或blaOXA-143基因的鲍曼不动杆菌分离株中的首次报道。分子分型揭示了分离株之间的高度遗传异质性,和多克隆传播。
    结论:遗传抗性决定因素的积累强调了严格的感染控制措施和强有力的抗菌药物管理计划以遏制多药耐药菌株的必要性。
    OBJECTIVE: To investigate the genetic profile and characterize antimicrobial resistance, including the main β-lactam antibiotic resistance genes, in Acinetobacterbaumannii isolates from a tertiary hospital in Recife-PE, Brazil, in the post-COVID-19 pandemic period.
    RESULTS: Acinetobacter baumannii isolates were collected between 2023 and 2024 from diverse clinical samples. Antimicrobial resistance testing followed standardized protocols, with β-lactamase-encoding genes detected via PCR and sequencing. Investigation into ISAba1 upstream of blaOXA-carbapenemase and blaADC genes was also conducted. Genetic diversity was assessed through ERIC-PCR. Among the 78 A. baumannii, widespread resistance to multiple antimicrobials was evident. Various acquired β-lactamase-encoding genes (blaOXA-23,-24,-58,-143, blaVIM, and blaNDM) were detected. Furthermore, this is the first report of blaVIM-2 in A. baumannii isolates harboring either the blaOXA-23-like or the blaOXA-143 gene in Brazil. Molecular typing revealed a high genetic heterogeneity among the isolates, and multi-clonal dissemination.
    CONCLUSIONS: The accumulation of genetic resistance determinants underscores the necessity for stringent infection control measures and robust antimicrobial stewardship programs to curb multidrug-resistant strains.
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  • 文章类型: Journal Article
    背景:头孢美唑(CMZ)是一种碳青霉烯类药物,用于治疗产生超广谱β-内酰胺酶(ESBL)的细菌感染。在这项试点研究中,我们的目的是比较抗菌治疗(美罗培南[MP]和CMZ)和不抗菌治疗(对照组)对微生物组的影响.
    方法:这项研究是一个多中心,prospective,2020年10月至2022年10月进行的观察性试点研究。在两个时间点(早期:第1-3天和后期:第4-30天)收集粪便和唾液样本进行微生物组分析,对照组在一个时间点。
    结果:在MP和CMZ组中包括5个粪便(MP-F和CMZ-F)和5个唾液(MP-S和CMZ-S)样品。对照组包括10个粪便(C-F)和唾液(C-S)样品。根据Shannon丰富度指数确定,后期MP-F组的α组多样性明显低于对照组。基于加权和未加权UniFrac距离的粪便样本的Beta多样性分析显示,与对照组相比,后期CMZ-F和MP-F组存在差异。加权UniFrac分析表明,只有早期MP-F组与对照组不同。在唾液样本中,加权和未加权UniFrac分析显示,对照组和早期CMZ之间存在显着差异,后期CMZ,和后期MP组。
    结论:在日本患者中,与CMZ相比,MP治疗可能对粪便微生物组产生更大的影响。
    BACKGROUND: Cefmetazole (CMZ) is a carbapenem-sparing option in the treatment of extended-spectrum beta-lactamase (ESBL)-producing bacterial infection. In this pilot study, we aimed to compare the effects of antimicrobial treatment (meropenem [MP] and CMZ) with those of no antimicrobial treatment (control group) on the microbiome.
    METHODS: The study was a multicenter, prospective, observational pilot study conducted from October 2020 to October 2022. Feces and saliva samples were collected for microbiome analyses at two time points (early-period: days 1-3; and late-period: days 4-30) for the antimicrobial treatment group, and at one time point for the control group.
    RESULTS: Five feces (MP-F and CMZ-F) and five saliva (MP-S and CMZ-S) samples were included in the MP and the CMZ groups. Ten feces (C-F) and saliva (C-S) samples were included in the control group. Group α diversity was notably lower in the late-period MP-F group than the control group as determined with the Shannon richness index. β diversity analysis of the feces samples based on weighted and unweighted UniFrac distances revealed distinctions in both the late-period CMZ-F and MP-F groups compared with the control group. Weighted UniFrac analysis showed that only the early-period MP-F group differed from the control group. In the saliva samples, weighted and unweighted UniFrac analyses showed significant differences between the control group and the early CMZ, late CMZ, and late MP groups.
    CONCLUSIONS: MP treatment may cause larger impact on the feces microbiome than CMZ in Japanese patients.
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  • 文章类型: Journal Article
    背景:在低资源环境中治疗耐碳青霉烯的肠杆菌(CRE)感染具有挑战性,特别是由于治疗选择有限。粘菌素是治疗的主要药物;然而,肾毒性和神经毒性使该药物不太理想。因此,在接受替代抗菌药物治疗的患者中,死亡率可能高于粘菌素.我们评估了基于粘菌素的治疗与保留粘菌素治疗相比的CRE菌血症患者的死亡率。
    方法:我们从2015年1月至2020年12月,使用来自南非国家实验室的CRE菌血症监测系统的次要数据进行了一项横断面研究。包括在监测前哨地点住院的患者,从血液培养物中分离出CRE。多变量逻辑回归模型,通过多种估算来解释丢失的数据,本研究旨在确定院内死亡率与基于粘菌素的治疗与保留粘菌素治疗之间的相关性.
    结果:我们纳入了1607例患者,中位年龄为29岁(四分位距[IQR],0-52岁)和53%(857/1607)男性。肺炎克雷伯菌引起大部分感染(82%,n=1.247),最常见的碳青霉烯酶基因是blaOXA-48样(61%,n=551),和blaNDM(37%,n=333)。总体住院死亡率为31%(504/1607)。与使用粘菌素保留疗法32%[352/1086]治疗的患者相比,使用基于粘菌素的联合疗法治疗的患者病死率较低(29%[152/521])(p=0.18)。在我们估算的模型中,与保留粘菌素疗法相比,基于粘菌素的治疗与相似的死亡率相关(校正比值比[aOR]1.02;95%置信区间[CI]0.78~1.33,p=0.873).
    结论:在我们资源有限的环境中,以粘菌素为主的治疗患者的死亡风险与保留粘菌素治疗患者的死亡风险相当.鉴于粘菌素治疗的挑战和对替代药物的耐药性不断增加,需要进一步研究新型抗菌药物对治疗CRE感染的益处.
    BACKGROUND: Treatment of carbapenem-resistant Enterobacterales (CRE) infections in low-resource settings is challenging particularly due to limited treatment options. Colistin is the mainstay drug for treatment; however, nephrotoxicity and neurotoxicity make this drug less desirable. Thus, mortality may be higher among patients treated with alternative antimicrobials that are potentially less efficacious than colistin. We assessed mortality in patients with CRE bacteremia treated with colistin-based therapy compared to colistin-sparing therapy.
    METHODS: We conducted a cross-sectional study using secondary data from a South African national laboratory-based CRE bacteremia surveillance system from January 2015 to December 2020. Patients hospitalized at surveillance sentinel sites with CRE isolated from blood cultures were included. Multivariable logistic regression modeling, with multiple imputations to account for missing data, was conducted to determine the association between in-hospital mortality and colistin-based therapy versus colistin-sparing therapy.
    RESULTS: We included 1 607 case-patients with a median age of 29 years (interquartile range [IQR], 0-52 years) and 53% (857/1 607) male. Klebsiella pneumoniae caused most of the infections (82%, n=1 247), and the most common carbapenemase genes detected were blaOXA-48-like (61%, n=551), and blaNDM (37%, n=333). The overall in-hospital mortality was 31% (504/1 607). Patients treated with colistin-based combination therapy had a lower case fatality ratio (29% [152/521]) compared to those treated with colistin-sparing therapy 32% [352/1 086]) (p=0.18). In our imputed model, compared to colistin-sparing therapy, colistin-based therapy was associated with similar odds of mortality (adjusted odds ratio [aOR] 1.02; 95% confidence interval [CI] 0.78-1.33, p=0.873).
    CONCLUSIONS: In our resource-limited setting, the mortality risk in patients treated with colistin-based therapy was comparable to that of patients treated with colistin-sparing therapy. Given the challenges with colistin treatment and the increasing resistance to alternative agents, further investigations into the benefit of newer antimicrobials for managing CRE infections are needed.
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  • 文章类型: Journal Article
    背景:重症监护病房(ICU)入院时的免疫抑制与ICU获得性感染的发生率较高有关,其中一些与机会病原体有关。然而,免疫抑制与发病率的关系,ICU获得性细菌性血流感染(BSI)的微生物学和结局尚未得到彻底研究。
    方法:法国的回顾性单中心队列研究。1月1日至12月31日,所有在里尔大学附属医院ICU住院时间>48h的成年患者,包括2020年,不管他们的免疫状况如何。免疫抑制被定义为活动性癌症或恶性血液病,中性粒细胞减少症,造血干细胞和实体器官移植,使用类固醇或免疫抑制药物,人类免疫缺陷病毒感染和遗传性免疫缺陷。主要目的是比较免疫受损和非免疫受损患者ICU获得性细菌BSI的28天累积发生率。次要目标是评估两组ICU获得性细菌BSI的微生物学和结果。
    结果:共有1313例患者(66.9%为男性,中位年龄62岁)。其中,入住ICU时,271例(20.6%)免疫受损。入院时的严重分数,两组间的侵入性器械使用情况和ICU住院期间的抗生素暴露情况具有可比性.在调整预先指定的基线混杂因素之前和之后,免疫功能低下和非免疫功能低下患者的ICU获得性细菌性BSI的28天累积发生率无统计学差异.各组间细菌分布相当,与大多数革兰氏阴性杆菌(~64.1%)。组间多重耐药细菌的比例也相似。ICU获得性细菌性BSI的发生与较长的ICU住院时间和较长的有创机械通气持续时间相关。与死亡率没有显著关联。免疫状态并未改变ICU获得性细菌BSI的发生与这些结果之间的关联。
    结论:ICU入院时,有和没有免疫抑制的患者ICU获得性细菌性BSI的28天累积发生率没有统计学差异。
    BACKGROUND: Immunosuppression at intensive care unit (ICU) admission has been associated with a higher incidence of ICU-acquired infections, some of them related to opportunistic pathogens. However, the association of immunosuppression with the incidence, microbiology and outcomes of ICU-acquired bacterial bloodstream infections (BSI) has not been thoroughly investigated.
    METHODS: Retrospective single-centered cohort study in France. All adult patients hospitalized in the ICU of Lille University-affiliated hospital for > 48 h between January 1st and December 31st, 2020, were included, regardless of their immune status. Immunosuppression was defined as active cancer or hematologic malignancy, neutropenia, hematopoietic stem cell and solid organ transplants, use of steroids or immunosuppressive drugs, human immunodeficiency virus infection and genetic immune deficiency. The primary objective was to compare the 28-day cumulative incidence of ICU-acquired bacterial BSI between immunocompromised and non-immunocompromised patients. Secondary objectives were to assess the microbiology and outcomes of ICU-acquired bacterial BSI in the two groups.
    RESULTS: A total of 1313 patients (66.9% males, median age 62 years) were included. Among them, 271 (20.6%) were immunocompromised at ICU admission. Severity scores at admission, the use of invasive devices and antibiotic exposure during ICU stay were comparable between groups. Both prior to and after adjustment for pre-specified baseline confounders, the 28-day cumulative incidence of ICU-acquired bacterial BSI was not statistically different between immunocompromised and non-immunocompromised patients. The distribution of bacteria was comparable between groups, with a majority of Gram-negative bacilli (~ 64.1%). The proportion of multidrug-resistant bacteria was also similar between groups. Occurrence of ICU-acquired bacterial BSI was associated with a longer ICU length-of-stay and a longer duration of invasive mechanical ventilation, with no significant association with mortality. Immune status did not modify the association between occurrence of ICU-acquired bacterial BSI and these outcomes.
    CONCLUSIONS: The 28-day cumulative incidence of ICU-acquired bacterial BSI was not statistically different between patients with and without immunosuppression at ICU admission.
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