marine fungi

海洋真菌
  • 文章类型: Journal Article
    一种海洋真菌菌株,曲霉属。ITBBc1是从海南省南中国海收集的珊瑚中分离出来的。对该菌株的发酵提取物进行了深入的化学研究,提供了四种新的次级代谢产物(1-4),命名为甲磺酸甲-C和异戊烯基对苯苷H,连同四个已知的化合物(5-8)。通过广泛的光谱分析(包括一维和二维(1D和2D)NMR光谱和高分辨率电喷雾电离质谱(HR-ESI-MS))阐明了它们的结构。采用改进的Mosher方法来确定新化合物的绝对构型。植物毒性试验表明,化合物6-8对小麦和水稻种子萌发具有明显的拮抗活性,呈剂量依赖关系。
    A marine-derived fungal strain, Aspergillus sp. ITBBc1, was isolated from coral collected from the South China Sea in Hainan province. Intensive chemical investigation of the fermentation extract of this strain afforded four new secondary metabolites (1-4), named megastigmanones A-C and prenylterphenyllin H, along with four known compounds (5-8). Their structures were elucidated by extensive spectroscopic analysis including one-and two-dimensional (1D and 2D) NMR spectroscopy and high-resolution electrospray ionization mass spectrometry (HR-ESI-MS). The modified Mosher\'s method was undertaken to determine the absolute configurations of new compounds. The phytotoxic activity test showed that compounds 6-8 exhibited significant antagonistic activity against the germination of Triticum aestivum L. and Oryza sativa L. seeds with a dose-dependent relationship.
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  • 文章类型: Journal Article
    一种新型的细胞松弛素,名为二去甲松弛素A(1),带有肉桂基和环氧-大环酮,和新的苯丙酸衍生物(2),和两个已知的化合物(3和4)从马氏Conus衍生的真菌Diaporthesp。XMA007.通过详细的光谱分析阐明了它们的结构,通过构象分析和TDDFT-ECD计算确定1的绝对构型。进行了它们对PDE4抑制和乳腺癌细胞毒性的活性评价,和化合物1显示对PDE4的中度抑制。
    A novel cytochalasin named diaporchalasin A (1) bearing a cinnamenyl and an epoxy-macrocycloketone, and a new benzenepropionic acid derivative (2), and two known compounds (3 and 4) were isolated from Conus marmoreus-derived fungus Diaporthe sp. XMA007. Their structures were elucidated through detailed spectroscopic analysis, and the absolute configuration of 1 was determined by conformational analysis and TDDFT-ECD calculation. Their activity evaluation on PDE4 inhibition and breast cancer cell cytotoxicity were conducted, and compound 1 showed moderate inhibition on PDE4.
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  • 文章类型: Journal Article
    海洋领域的塑料污染是一个严重的环境问题。然而,塑料还可以作为微生物的潜在碳源和能源,然而海洋微生物的贡献,特别是海洋真菌对塑料的降解没有很好的约束。我们从北太平洋亚热带环流的漂浮塑料碎片中分离出真菌Parengyodontium专辑,并通过在9天的孵育中使用13C-PE进行稳定的同位素探测测定法,测量了聚乙烯(PE)的真菌介导的矿化率(转化为CO2)。当PE用UV光预处理时,最初添加的PE的生物降解率为0.044%/天。此外,我们使用nanoSIMS和脂肪酸分析追踪了PE衍生的13C-碳在P.baler生物质中的掺入。尽管紫外线处理的13C-PE的矿化率高,PE衍生的13C掺入真菌细胞是次要的,未处理的PE未检测到13C掺入。一起,我们的结果揭示了P.album在海洋环境中降解PE并将其矿化为CO2的潜力。然而,PE的初始光降解对于P.alum代谢PE衍生的碳至关重要。
    Plastic pollution in the marine realm is a severe environmental problem. Nevertheless, plastic may also serve as a potential carbon and energy source for microbes, yet the contribution of marine microbes, especially marine fungi to plastic degradation is not well constrained. We isolated the fungus Parengyodontium album from floating plastic debris in the North Pacific Subtropical Gyre and measured fungal-mediated mineralization rates (conversion to CO2) of polyethylene (PE) by applying stable isotope probing assays with 13C-PE over 9 days of incubation. When the PE was pretreated with UV light, the biodegradation rate of the initially added PE was 0.044 %/day. Furthermore, we traced the incorporation of PE-derived 13C carbon into P. album biomass using nanoSIMS and fatty acid analysis. Despite the high mineralization rate of the UV-treated 13C-PE, incorporation of PE-derived 13C into fungal cells was minor, and 13C incorporation was not detectable for the non-treated PE. Together, our results reveal the potential of P. album to degrade PE in the marine environment and to mineralize it to CO2. However, the initial photodegradation of PE is crucial for P. album to metabolize the PE-derived carbon.
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  • 文章类型: Journal Article
    地中海是生物多样性的热点,其真菌成分仍未充分开发。海洋沉积物代表了最多样化的基质;然而,在培养中回收真菌的挑战阻碍了对这种多样性的精确鉴定。浓缩技术如脱脂乳絮凝(SMF)可以代表合适的解决方案。这里,我们比较了直接平板和SMF结合三种培养基和两种孵育温度回收丝状子囊的有效性,我们描述了在海洋沉积物中检测到的真菌多样性。在2021年至2022年之间,在西班牙西地中海沿岸的两个海滩(Miracle和Arrabassada)的不同深度收集了沉积物。我们回收了362株,经过形态学选择,188个主要用LSU和ITS条形码识别,代表54属94种。曲霉菌,青霉,Scedosporium是最常见的属,两个海滩之间的丰度百分比不同。Arrabassada海滩更加异质,42属,代表60种(奇迹海滩,28属54种)。尽管大多数物种是通过直接电镀回收的(70种),使用SMF作为样品预处理专门获得20种,提高我们在培养中检测真菌的能力。此外,我们提出了Exophiala属的三个新物种,黑脑,和昆士兰州,第四个代表新的裂殖衣原体属。我们得出结论,SMF是一种有用的技术,与直接电镀相结合,包括不同的培养基和培养温度,在培养依赖性研究中提高了恢复海洋真菌群落的机会。
    The Mediterranean Sea stands out as a hotspot of biodiversity, whose fungal composition remains underexplored. Marine sediments represent the most diverse substrate; however, the challenge of recovering fungi in culture hinders the precise identification of this diversity. Concentration techniques like skimmed milk flocculation (SMF) could represent a suitable solution. Here, we compare the effectiveness in recovering filamentous ascomycetes of direct plating and SMF in combination with three culture media and two incubation temperatures, and we describe the fungal diversity detected in marine sediments. Sediments were collected at different depths on two beaches (Miracle and Arrabassada) on the Spanish western Mediterranean coast between 2021 and 2022. We recovered 362 strains, and after a morphological selection, 188 were identified primarily with the LSU and ITS barcodes, representing 54 genera and 94 species. Aspergillus, Penicillium, and Scedosporium were the most common genera, with different percentages of abundance between both beaches. Arrabassada Beach was more heterogeneous, with 42 genera representing 60 species (Miracle Beach, 28 genera and 54 species). Although most species were recovered with direct plating (70 species), 20 species were exclusively obtained using SMF as a sample pre-treatment, improving our ability to detect fungi in culture. In addition, we propose three new species in the genera Exophiala, Nigrocephalum, and Queenslandipenidiella, and a fourth representing the novel genus Schizochlamydosporiella. We concluded that SMF is a useful technique that, in combination with direct plating, including different culture media and incubation temperatures, improves the chance of recovering marine fungal communities in culture-dependent studies.
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  • 文章类型: Journal Article
    海洋真菌在海洋微生物多样性中占重要比例。它们是生物技术目的和工业应用的有吸引力的候选者。尽管人们对真菌学越来越感兴趣,在毛里求斯,与海绵和藻类相关的海洋真菌研究甚少。这项研究的目的是:1)使用多基因系统发育分析来鉴定分离的海洋真菌;2)确定真菌提取物的抗菌和抗氧化特性的差异;3)评估它们的酶活性和染料脱色潜力。五种真菌分离物,即曲霉,紫曲霉,曲霉,Exserohilumrostratum和Biatriosporasp。是根据系统发育分析确定的。与抗氧化性质不同,液体和固体培养基提取物的抗微生物性质没有显著差异(p<0.05)。黑曲霉(F2-SF)的固体培养基提取物对金黄色葡萄球菌的最小抑制浓度为0.156mg/ml,而黑曲霉(F25-SF)对粪肠球菌和伤寒沙门氏菌的最小抑制浓度为0.313和2.5mg/ml。Biatriosporasp。的固体培养基提取物。(F34-SF)对蜡样芽孢杆菌的最小抑制浓度为0.195和1.563mg/ml,大肠杆菌和阴沟肠杆菌。2,2-二苯基-1-吡啶酰肼(DPPH)清除试验的IC50为78.92±4.71μg/ml,用黑曲霉的固体培养基提取物获得铁还原抗氧化能力(FRAP)值为11.17±0.20mMFe2/g干重提取物(DWE),总酚含量为360.35±10.31mgGAE/gDWE(F2-SF)。土壤曲霉(F25-SF)和生物孢子菌。与液体培养基提取物相比,(F34-SF)固体培养基提取物在DPPH测定中显示出较低的IC50值和较高的总酚含量。黑曲霉是DNA酶和脂肪酶的良好生产者,对刚果红的最大染料脱色率为79.40±17.72%。发现DNAse和脂肪酶的酶学指数≥2,并且在亚甲基蓝上观察到的最大染料脱色百分比为87.18±3.80%。关于Biatriosporasp.,它是三种酶淀粉酶的中度生产者,DNA酶和蛋白酶对结晶紫的最大染料脱色潜力为56.29±6.51%。这项研究表明,毛里求斯海洋真菌具有良好的生物活性,酶和染料脱色潜力,可以考虑用于制药和工业应用。
    Marine fungi represent an important proportion of the microbial diversity in the oceans. They are attractive candidates for biotechnological purposes and industrial applications. Despite an increasing interest in mycology, marine fungi associated with sponges and algae have been poorly studied in Mauritius. The objectives of this study were to: 1) use multigene phylogenetic analyses to identify isolated marine fungi; 2) determine the differences in the antimicrobial and antioxidant properties of the fungal extracts; and 3) assess their enzyme activities and dye decolorization potential. Five fungal isolates viz Aspergillus chevalieri, Aspergillus iizukae, Aspergillus ochraceus, Exserohilum rostratum and Biatriospora sp. were identified based on phylogenetic analyses. There was no significant difference in the antimicrobial properties of the liquid and solid media extracts unlike the antioxidant properties (p < 0.05). The solid media extract of Aspergillus chevalieri (F2-SF) had a minimum inhibitory concentration of 0.156 mg/ml against Staphylococcus aureus while Aspergillus ochraceus (F25-SF) had a minimum inhibitory concentration of 0.313 and 2.5 mg/ml against Enterococcus faecalis and Salmonella typhi. The solid media extract of Biatriospora sp. (F34-SF) had a minimum inhibitory concentration of 0.195 and 1.563 mg/ml against Bacillus cereus, Escherichia coli and Enterobacter cloacae. An IC50 of 78.92 ± 4.71 μg/ml in the 2,2-Diphenyl-1-picrylhydrazyl (DPPH) scavenging assay, ferric reducing antioxidant power (FRAP) value of 11.17 ± 0.20 mM Fe2+/g dry weight extract (DWE) and total phenolic content 360.35 ± 10.31 mg GAE/g DWE was obtained with the solid media extract of Aspergillus chevalieri (F2-SF). Aspergillus ochraceus (F25-SF) and Biatriospora sp. (F34-SF) solid media extracts showed lower IC50 values in the DPPH assay and higher total phenolic content as compared to the liquid media extracts. Aspergillus chevalieri was a good producer of the enzymes DNAse and lipase and had maximum percentage dye decolorization of 79.40 ± 17.72% on Congo red. An enzymatic index ≥ 2 was found for the DNAse and lipase and the maximum percentage dye decolorization of 87.18 ± 3.80% was observed with Aspergillus ochraceus on Methylene blue. Regarding Biatriospora sp., it was a moderate producer of the three enzymes amylase, DNAse and protease and had a maximum dye decolorization potential of 56.29 ± 6.51% on Crystal violet. This study demonstrates that Mauritian marine fungi possess good bioactive properties, enzymatic and dye decolorization potentials, that can potentially be considered for use in pharmaceutical and industrial applications.
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  • 文章类型: Journal Article
    酵母在公海中普遍存在,然而,我们对它们的生态生理适应的理解有限,包括它们对氮可用性的反应,这在决定其他浮游微生物的生态潜力方面可以发挥重要作用。在这项研究中,我们表征了海洋酵母的氮吸收能力和生长响应。筛选了来自北大西洋的酵母分离物在多种氮底物上的生长,并且跨越三种与环境相关的氮底物的浓度梯度:硝酸盐,铵,和尿素。三株菌株富含硝酸盐,而两株则没有,证明硝酸盐在海洋酵母中存在但不普遍,与非海洋酵母菌株的现有知识一致。NaganishiadidiffluensMBA_F0213修改了细胞大小响应氮浓度的关键功能性状,表明海洋环境中酵母细胞形态沿化学梯度变化。公共数据库中参考DNA条形码的荟萃分析表明,Naganishia属具有全球海洋分布,加强基于文化的观测的环境适用性。这项研究提供了对海洋酵母对体外可变氮利用率的生态生理和形态响应的新的定量理解,深入了解远洋开放海洋环境中酵母的功能生态学。
    Yeasts are prevalent in the open ocean, yet we have limited understanding of their ecophysiological adaptations, including their response to nitrogen availability, which can have a major role in determining the ecological potential of other planktonic microbes. In this study, we characterized the nitrogen uptake capabilities and growth responses of marine-occurring yeasts. Yeast isolates from the North Atlantic Ocean were screened for growth on diverse nitrogen substrates, and across a concentration gradient of three environmentally relevant nitrogen substrates: nitrate, ammonium, and urea. Three strains grew with enriched nitrate while two did not, demonstrating that nitrate utilization is present but not universal in marine yeasts, consistent with existing knowledge of nonmarine yeast strains. Naganishia diffluens MBA_F0213 modified the key functional trait of cell size in response to nitrogen concentration, suggesting yeast cell morphology changes along chemical gradients in the marine environment. Meta-analysis of the reference DNA barcode in public databases revealed that the genus Naganishia has a global ocean distribution, strengthening the environmental applicability of the culture-based observations. This study provides novel quantitative understanding of the ecophysiological and morphological responses of marine-derived yeasts to variable nitrogen availability in vitro, providing insight into the functional ecology of yeasts within pelagic open ocean environments.
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  • 文章类型: Journal Article
    这项研究代表了一项以筛选六种海洋真菌为中心的初步调查,Maremicellopsismaritima,Engyodontium专辑,Monticulosa下风,Hortaeawerneckii,哈茨木霉,和曲霉sp.7,与红藻细螺旋藻相关,是从基隆朝津公园收集的,台湾,作为虾水产养殖的潜在免疫刺激剂。认识到必须采取新的战略来对抗水产养殖中使用抗生素和疫苗引起的病原体耐药性,这项研究旨在评估代谢组学概况,抗氧化能力,和海洋真菌的抗菌性能。真菌提取物的抗菌活性对五种主要水产养殖病原体进行了评估:枯草芽孢杆菌,大肠杆菌,金黄色葡萄球菌,铜绿肠杆菌,和副溶血性弧菌.在评估细胞毒性之前,使用盐水虾对海洋真菌提取物的活力和细胞毒性进行了初步评估,增长业绩,免疫功效,和抗病性对虾。本研究表明,总植物化学分析与抗氧化活性相关。Emericellopsismaritima和harzianum木霉表现出最强的DPPH抗氧化剂清除活性,其半数最大抑制浓度(IC50)为16.5±1.2和12.2±2.6,与抗坏血酸相当。对海洋真菌提取物进行LC-HDMSE分析,鉴定出8000多种代谢物,主要属于有机氧化合物的超类水平,有机杂环化合物,苯丙素类和聚酮化合物,生物碱及其衍生物,苯类化合物,木脂素和新木脂素,脂质和类脂分子,核苷酸和核苷,有机氮化合物,有机酸及其衍生物。总的来说,我们的研究通过探索替代抗菌解决方案和利用海洋内生真菌固有的生物活性潜力,为可持续实践的发展做出了重要贡献。总之,我们的研究促进了我们对真菌群落及其应用的理解,并为开发有效和环保的方法来提高虾的健康和生产力提供了希望。
    This study represents a primary investigation centered on screening six marine fungi, Emericellopsis maritima, Engyodontium album, Hypomontagnella monticulosa, Hortaea werneckii, Trichoderma harzianum, and Aspergillus sp.7, associated with the red algae Pterocladiella capillacea, which was collected from Chao-Jin Park in Keelung, Taiwan, as potential immunostimulants for shrimp aquaculture. Recognizing the imperative for novel strategies to combat pathogen resistance arising from the use of antibiotics and vaccines in aquaculture, this study aimed to evaluate the metabolomic profile, antioxidant capabilities, and antibacterial properties of marine fungi. The antibacterial activity of the fungal extract was evaluated against five major aquaculture pathogens: Bacillus subtilis, Escherichia coli, Staphylococcus aureus, Enterobacter aeruginosa, and Vibrio parahaemolyticus. The viability and cytotoxicity of marine fungal extracts were preliminarily evaluated using brine shrimps before assessing cytotoxicity, growth performance, immune efficacy, and disease resistance in white shrimp. The present study demonstrated that total phytochemical analysis correlated with antioxidant activity. Emericellopsis maritima and Trichoderma harzianum exhibited the strongest DPPH antioxidant scavenging activities of half-maximal inhibitory concentration (IC50) 16.5 ± 1.2 and 12.2 ± 2.6, which are comparable to ascorbic acid. LC-HDMSE analysis of the marine fungal extracts identified more than 8000 metabolites mainly classified under the superclass level of organic oxygen compounds, Organoheterocyclic compounds, Phenylpropanoids and polyketides, alkaloid and derivatives, benzenoids, lignans and neolignans, lipid and lipid-like molecules, nucleotides and nucleosides, organic nitrogen compounds, and organic acids and derivatives. Overall, our study significantly contributes to the advancement of sustainable practices by exploring alternative antimicrobial solutions and harnessing the bioactive potential inherent in marine endophytic fungi. In conclusion, our study advances our comprehension of fungal communities and their applications and holds promise for the development of effective and environmentally friendly approaches for enhancing shrimp health and productivity.
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  • 文章类型: Journal Article
    海洋真菌,例如青霉属和曲霉属的物种,是多种具有细胞毒性的天然产物的多产生产者。这些真菌已成功地从各种海洋来源分离和鉴定,包括海绵,珊瑚,藻类,红树林,沉积物,和海水。来自海洋真菌的细胞毒性化合物可以分为五类:聚酮化合物,肽,萜类和甾醇,杂种,和其他杂项化合物。值得注意的是,这些化合物中最杰出的一组包括聚酮化合物,占642种鉴定化合物中的307种。特别是,在这个集合中,642种化合物中有23种表现出显著的细胞毒性,IC50值以纳摩尔(nM)或纳克/毫升(ng/mL)水平测量。这篇综述阐明了起源的真菌菌株,隔离的来源,化学结构,以及从海洋真菌中分离出的642种新型天然产物的值得注意的抗肿瘤活性。本次审查的范围包括1991年至2023年。
    Marine fungi, such as species from the Penicillium and Aspergillus genera, are prolific producers of a diversity of natural products with cytotoxic properties. These fungi have been successfully isolated and identified from various marine sources, including sponges, coral, algae, mangroves, sediment, and seawater. The cytotoxic compounds derived from marine fungi can be categorized into five distinct classes: polyketides, peptides, terpenoids and sterols, hybrids, and other miscellaneous compounds. Notably, the pre-eminent group among these compounds comprises polyketides, accounting for 307 out of 642 identified compounds. Particularly, within this collection, 23 out of the 642 compounds exhibit remarkable cytotoxic potency, with IC50 values measured at the nanomolar (nM) or nanogram per milliliter (ng/mL) levels. This review elucidates the originating fungal strains, the sources of isolation, chemical structures, and the noteworthy antitumor activity of the 642 novel natural products isolated from marine fungi. The scope of this review encompasses the period from 1991 to 2023.
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  • 文章类型: Journal Article
    在这项研究中,使用多相方法对从Tyrenian海中部收集的海洋被膜Halocynthiapapillosa中分离出的15个Lulworthiales菌株进行了表征(形态生理,分子,和系统发育分析)。基于多基因座系统发育推断和形态特征,一个新的属,Rambellisea,和两个新物种,卤虫和吉格里纳斯(Lulworthales),被提议。使用DNA的核核糖体区域进行多位点系统发育分析(nrITS1-nr5.8S-nrITS2,nrLSU,和nrSSU)序列数据强烈支持新分类群。系统发育推断,使用最大似然和贝叶斯推断进行估计,清楚地表明Rambelliseagen。11月。在Lulworthiales命令中形成了一个独特的进化枝。此外,这两个新物种被分成不同的子分支,得到分析的有力支持。这是从动物中分离出的Lulworthiales物种的第一份报告。
    In this study, 15 Lulworthiales strains isolated from the marine tunicate Halocynthia papillosa collected in the central Tyrrhenian Sea were characterized using a polyphasic approach (morpho-physiological, molecular, and phylogenetic analyses). Based on multi-locus phylogenetic inference and morphological characters, a new genus, Rambellisea, and two new species, R. halocynthiae and R. gigliensis (Lulworthiales), were proposed. Multi-locus phylogenetic analyses using the nuclear ribosomal regions of DNA (nrITS1-nr5.8S-nrITS2, nrLSU, and nrSSU) sequence data strongly supported the new taxa. Phylogenetic inference, estimated using Maximum Likelihood and Bayesian Inference, clearly indicates that Rambellisea gen. nov. forms a distinct clade within the order Lulworthiales. Moreover, the two new species were separated into distinct subclades, solidly supported by the analyses. This is the first report of Lulworthiales species isolated from animals.
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  • 文章类型: Journal Article
    枝孢霉,水草科子囊菌真菌的一个属,主要被认为是广泛存在的环境腐生真菌或植物内生菌。进一步的研究表明,该属分布在各种环境中,特别是在海洋生态系统中,比如珊瑚礁,红树林和极地地区。枝孢霉,尤其是海洋来源的枝孢子菌,是一类资源丰富的真菌,其天然产物因其多样化的化学结构和生物活性而受到关注,以及它们作为新型药物生产化合物来源的潜力。这篇评论涵盖了来源,分布,生物活性,在2000年1月至2022年12月期间从枝孢菌中分离出的化合物的生物合成和结构特征,并对从海洋和陆地来源衍生的枝孢菌分离出的化合物进行了比较分析。我们的结果表明,首次报道了34%的枝孢霉衍生的天然产物。首先报道的化合物中有71.79%是从海洋来源的枝孢菌中分离出来的。枝孢菌衍生的化合物表现出不同的骨骼化学结构,集中在聚酮化合物类别(48.47%),生物碱(19.21%),类固醇和萜类化合物(17.03%)。已发现从枝孢菌中分离出的超过一半的天然产物具有各种生物活性,包括细胞毒性,抗菌,抗病毒,抗真菌和酶抑制活性。这些发现证明了枝孢霉的巨大潜力,尤其是海洋来源的枝孢子菌,产生新的生物活性天然产物,为新药开发提供结构基础。
    Cladosporium, a genus of ascomycete fungi in the Dematiaceae family, is primarily recognized as a widespread environmental saprotrophic fungus or plant endophyte. Further research has shown that the genus is distributed in various environments, particularly in marine ecosystems, such as coral reefs, mangroves and the polar region. Cladosporium, especially the marine-derived Cladosporium, is a highly resourceful group of fungi whose natural products have garnered attention due to their diverse chemical structures and biological activities, as well as their potential as sources of novel leads to compounds for drug production. This review covers the sources, distribution, bioactivities, biosynthesis and structural characteristics of compounds isolated from Cladosporium in the period between January 2000 and December 2022, and conducts a comparative analysis of the Cladosporium isolated compounds derived from marine and terrestrial sources. Our results reveal that 34% of Cladosporium-derived natural products are reported for the first time. And 71.79% of the first reported compounds were isolated from marine-derived Cladosporium. Cladosporium-derived compounds exhibit diverse skeletal chemical structures, concentrating in the categories of polyketides (48.47%), alkaloids (19.21%), steroids and terpenoids (17.03%). Over half of the natural products isolated from Cladosporium have been found to have various biological activities, including cytotoxic, antibacterial, antiviral, antifungal and enzyme-inhibitory activities. These findings testify to the tremendous potential of Cladosporium, especially the marine-derived Cladosporium, to yield novel bioactive natural products, providing a structural foundation for the development of new drugs.
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