铁还原微生物(FeRM)在许多自然和工程过程中起着关键作用。从多物种样品中可视化和分离FeRM对于了解FeRM的原位位置和地球化学作用至关重要。这里,我们通过高灵敏度的“开启”Fe2+特异性荧光化学剂量计(FSFC)可视化FeRM,选择性,和稳定性。该FSFC可以从任一纯培养物中选择性地识别和定位活性FeRM,不同细菌的共培养,或含沉积物的样品。FSFC的荧光强度可用作细菌培养物中Fe2浓度的指标。通过将FSFC的使用与单细胞分选仪的使用相结合,我们从一个富集的财团获得了三个FSFC标记的细胞,并且所有这些细胞随后都被证明能够铁还原;两个未标记的细胞被证明没有铁还原能力,进一步证实了FSFC的可行性。重要性来自不同学科的研究人员通常需要从包含多个物种的样品中可视化和分离FeRM,如环境微生物学,环境科学,和地球化学。然而,没有可用的方法报告。在这项研究中,我们提供了一种可视化FeRM的方法,甚至在单细胞水平上评估它们的活性。当这种方法与单细胞分类器的使用相结合时,也可以从含有多种物种的样品中分离FeRM。该方法可用作揭示FeRM的原位或非原位作用及其与环境微生物或化学物质的相互作用的有力工具。
Iron-reducing microorganisms (FeRM) play key roles in many natural and engineering processes. Visualizing and isolating FeRM from multispecies samples are essential to understand the in situ location and geochemical role of FeRM. Here, we visualized FeRM by a \"turn-on\" Fe2+-specific fluorescent chemodosimeter (FSFC) with high sensitivity, selectivity, and stability. This FSFC could selectively identify and locate active FeRM from either pure culture, coculture of different bacteria, or sediment-containing samples. Fluorescent intensity of the FSFC could be used as an indicator of Fe2+ concentration in bacterial cultures. By combining the use of the FSFC with that of a single-cell sorter, we obtained three FSFC-labeled cells from an enriched consortium, and all of them were subsequently shown to be capable of iron reduction; two unlabeled cells were shown to have no iron-reducing capability, further confirming the feasibility of the FSFC.IMPORTANCE Visualization and isolation of FeRM from samples containing multiple species are commonly needed by researchers from different disciplines, such as environmental microbiology, environmental sciences, and geochemistry. However, no available method has been reported. In this study, we provide a method to visualize FeRM and evaluate their activity even at the single-cell level. When this approach is combined with use of a single-cell sorter, FeRM can also be isolated from samples containing multiple species. This method can be used as a powerful tool to uncover the in situ or ex situ role of FeRM and their interactions with ambient microbes or chemicals.