carbapenem-resistant enterobacterales

耐碳青霉烯类肠杆菌
  • 文章类型: Journal Article
    背景:抗菌素耐药性对全球公共卫生构成重大威胁。我们研究了对头孢菌素耐药的肠杆菌(ESCrE)定植的患病率,耐碳青霉烯类肠杆菌(CRE),以及印度南部医院和周边社区的粘菌素耐药肠杆菌(Col-RE)。
    方法:纳入2家医院和流域社区同意提供粪便标本的成年人。将粪便镀在CHROMagar上选择性地进行ESCrE,CRE,Col-RE.使用Vitek2Compact和圆盘扩散测试进行细菌鉴定和抗生素敏感性测试。对分离物的子集进行粘菌素肉汤微量稀释。患病率估计值以95%置信区间(CI)计算,并使用Pearsonχ2或Fisher精确检验比较了不同人群的差异。
    结果:在2020年11月至2022年3月期间,社区757名成年人和556名住院成年人被纳入研究。ESCrE定植患病率在社区为71.5%(95%CI,68.1%-74.6%),在医院为81.8%(95%CI,78.4%-84.8%),而CRE定植患病率在社区为15.1%(95%CI,12.7%-17.8%),在医院为22.7%(95%CI,19.4%-26.3%).社区Col-RE定植患病率估计为1.1%(95%CI,0.5%-2.1%),医院为0.5%(95%CI,2%-1.6%)。与社区参与者相比,医院参与者的ESCrE和CRE定植明显更高(两者均P<.001)。
    结论:在社区和医院环境中都发现了高水平的抗生素耐药肠杆菌定植。这项研究强调了在这些环境中监测定植对于了解抗生素耐药性负担的重要性。
    BACKGROUND: Antimicrobial resistance poses a significant threat to public health globally. We studied the prevalence of colonization with extended-spectrum cephalosporin-resistant Enterobacterales (ESCrE), carbapenem-resistant Enterobacterales (CRE), and colistin-resistant Enterobacterales (Col-RE) in hospitals and the surrounding community in South India.
    METHODS: Adults from 2 hospitals and the catchment community who consented to provide stool specimens were enrolled. Stools were plated on CHROMagar selective for ESCrE, CRE, and Col-RE. Bacterial identification and antibiotic susceptibility testing were done using Vitek 2 Compact and disc diffusion testing. Colistin broth microdilution was performed for a subset of isolates. Prevalence estimates were calculated with 95% confidence intervals (CIs), and differences were compared across populations using the Pearson χ  2 or Fisher exact test.
    RESULTS: Between November 2020 and March 2022, 757 adults in the community and 556 hospitalized adults were enrolled. ESCrE colonization prevalence was 71.5% (95% CI, 68.1%-74.6%) in the community and 81.8% (95% CI, 78.4%-84.8%) in the hospital, whereas CRE colonization prevalence was 15.1% (95% CI, 12.7%-17.8%) in the community and 22.7% (95% CI, 19.4%-26.3%) in the hospital. Col-RE colonization prevalence was estimated to be 1.1% (95% CI, .5%-2.1%) in the community and 0.5% (95% CI, .2%-1.6%) in the hospital. ESCrE and CRE colonization in hospital participants was significantly higher compared with community participants (P < .001 for both).
    CONCLUSIONS: High levels of colonization with antibiotic-resistant Enterobacterales were found in both community and hospital settings. This study highlights the importance of surveillance of colonization in these settings for understanding the burden of antimicrobial resistance.
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  • 文章类型: Journal Article
    背景:头孢他啶/阿维巴坦是碳青霉烯类耐药肠杆菌(CRE)的首选治疗方案之一。然而,头孢他啶/阿维巴坦与另一种抗生素合用的益处尚不清楚.
    目的:确定在使用头孢他啶/阿维巴坦治疗CRE感染期间与治疗失败相关的变量,并评估氨基糖苷类与头孢他啶/阿维巴坦联用的效果。
    方法:这是一项回顾性队列研究,对2015年至2021年间在134个退伍军人事务(VA)机构中接受头孢他啶/阿维巴坦治疗的CRE培养阳性患者进行了研究。主要结局是30天死亡率,次要结局是院内死亡率。还对接受氨基糖苷的患者进行了亚分析。
    结果:共纳入303例患者。总体30天和住院死亡率分别为12.5%和24.1%,分别。年龄(aOR1.052,95%CI1.013-1.093),ICU中的存在(OR2.704,95%CI1.071-6.830),以及在开始服用头孢他啶/阿维巴坦之前接受氨基糖苷类药物(aOR4.512,95%CI1.797~11.327)与30日死亡率独立相关.在接受氨基糖苷的患者亚组(n=77)中,他们与头孢他啶/阿维巴坦联用的30日死亡率aOR为0.321(95%CI,0.089-1.155).
    结论:在使用头孢他啶/阿维巴坦治疗CRE感染的退伍军人中,年龄增长,收到经验性氨基糖苷,并且在指数培养时在ICU的存在与更高的30天死亡率相关.在接受氨基糖苷类药物治疗的患者中,它们与头孢他啶/阿维巴坦联合使用,趋势是保护30天死亡率,提示这种组合在治疗重症患者CRE感染方面的潜在作用。
    BACKGROUND: Ceftazidime/avibactam is one of the preferred treatment options for carbapenem-resistant Enterobacterales (CRE). However, the benefit of combining ceftazidime/avibactam with another antibiotic remains unclear.
    OBJECTIVE: To identify variables associated with treatment failure during the use of ceftazidime/avibactam for CRE infections and assess the effect of combining an aminoglycoside with ceftazidime/avibactam.
    METHODS: This was a retrospective cohort study of patients with a positive CRE culture treated with ceftazidime/avibactam between 2015 and 2021 in 134 Veterans Affairs (VA) facilities. The primary outcome was 30-day mortality and the secondary outcome was in-hospital mortality. A subanalysis in patients who received an aminoglycoside was also performed.
    RESULTS: A total of 303 patients were included. The overall 30-day and in-hospital mortality rates were 12.5% and 24.1%, respectively. Age (aOR 1.052, 95% CI 1.013-1.093), presence in the ICU (aOR 2.704, 95% CI 1.071-6.830), and receipt of an aminoglycoside prior to initiation of ceftazidime/avibactam (aOR 4.512, 95% CI 1.797-11.327) were independently associated with 30-day mortality. In the subgroup of patients that received an aminoglycoside (n=77), their use in combination with ceftazidime/avibactam had a 30-day mortality aOR of 0.321 (95% CI, 0.089-1.155).
    CONCLUSIONS: In veterans treated with ceftazidime/avibactam for CRE infections, increased age, receipt of an empiric aminoglycoside, and presence in the ICU at the time of index culture were associated with higher 30-day mortality. Among patients who received an aminoglycoside, their use in combination with ceftazidime/avibactam trended toward protectiveness of 30-day mortality, suggesting a potential role for this combination to treat CRE infections in patients who are more severely ill.
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  • 文章类型: Journal Article
    本指南旨在促进在韩国临床实践中谨慎使用抗菌剂来管理耐碳青霉烯类肠杆菌(CRE)感染。一般部分包括常见CRE感染和诊断的管理建议,而每个特定部分的结构与关键问题集中在抗菌剂和疾病特异性方法。该指南涵盖了韩国目前可用的和即将推出的抗菌剂。
    This guideline aims to promote the prudent use of antibacterial agents for managing carbapenem-resistant Enterobacterales (CRE) infections in clinical practice in Korea. The general section encompasses recommendations for the management of common CRE infections and diagnostics, whereas each specific section is structured with key questions that are focused on antibacterial agents and disease-specific approaches. This guideline covers both currently available and upcoming antibacterial agents in Korea.
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  • 文章类型: Journal Article
    背景:胃肠道(GI)中碳青霉烯类耐药肠杆菌(CRE)的患者存在随后感染和传播的风险,必须采取接触预防措施。新霉素已在66-85%的分离物中显示出对CRE的体外活性。本研究评估了新霉素用于CRE脱色的有效性和安全性。
    方法:在这项开放标签的随机对照试验中,我们收集了高危患者的粪便/直肠拭子样本,并检测了CRE在胃肠道的定植情况.将患有CRE并符合合格标准的患者分为新霉素组(n=26;用4.2g/天新霉素治疗5天)和对照组(n=26)。在第7±2天和第14±2天进行粪便/直肠拭子中的CRE检测。
    结果:两组基线特征相似。新霉素组(46.2%)在第7±2天的CRE存在显着低于对照组(80.8%,p=0.01)。到第7天,新霉素(4.2g/天,持续5天)对CRE脱色的功效为42.8-53.8%。到第14±2天,新霉素组的CRE率已上升至与对照组的CRE率一致(73.1%vs.61.5%,p=0.56)。新霉素组经历了轻度,temporary,胃肠道副作用。
    结论:新霉素在第7±2天有效减少CRE定植,但其影响在第14±2天减弱。这表明新霉素剂量太低,治疗时间太短,无法持续进行CRE脱色。
    BACKGROUND: Patients with carbapenem-resistant Enterobacterales (CRE) in the gastrointestinal (GI) tract are at risk for subsequent infections and transmission, necessitating contact precautions. Neomycin has shown in vitro activity against CRE in 66-85% of isolates. This study evaluated the efficacy and safety of neomycin for CRE decolonization.
    METHODS: In this open-label randomized controlled trial, stool/rectal swab samples from high-risk patients were collected and tested for CRE colonization in the GI tract. Patients who had CRE and met eligible criteria were divided into a neomycin group (n = 26; treated with 4.2 g/day neomycin for 5 days) and a control group (n = 26). CRE detection in stool/rectal swabs was performed on days 7 ± 2 and 14 ± 2.
    RESULTS: The two groups\' baseline characteristics were similar. CRE presence on day 7 ± 2 was significantly lower in the neomycin group (46.2%) than in the control group (80.8%, p = 0.01). Efficacy of neomycin (4.2 g/day for 5 days) for CRE decolonization was 42.8-53.8% by day 7. By day 14 ± 2, the CRE rate in the neomycin group had risen to align with the control group\'s rate (73.1% vs. 61.5%, p = 0.56). The neomycin group experienced mild, temporary, gastrointestinal side-effects.
    CONCLUSIONS: Neomycin effectively reduced CRE colonization on day 7 ± 2, but its impact waned by day 14 ± 2. This suggests that neomycin dosage was too low and the duration of treatment was too short for lasting CRE decolonization.
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  • 文章类型: Journal Article
    大肠杆菌KA0011在美罗培南和亚胺培南的断点范围附近具有稳定的最低抑菌浓度值,使其适合用作抗菌敏感性测试的质量控制菌株。这里,我们报告了KA0011的完整基因组序列。
    Escherichia coli KA0011 had stable minimum inhibitory concentration values around the breakpoint range of meropenem and imipenem, making it suitable for use as a quality control strain for antimicrobial susceptibility testing. Here, we report the complete genomic sequence of KA0011.
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  • 文章类型: Journal Article
    耐碳青霉烯类肠杆菌(CRE)感染是对人类健康的紧迫威胁。本研究旨在开发和验证一种新型的多重实时PCR(多重qPCR)检测blaKPC,blaNDM,blaIMP,blaOXA-48-like,CRE分离株和临床样本中的blaVIM基因,以及将其与三种表型方法进行比较。
    评估了多qPCR测定的可靠性和检测限(LOD)。使用PCR和DNA测序作为鉴定CRE分离株和临床样品中碳青霉烯酶基因的参考方法。多重qPCR检测的准确性,改良碳青霉烯灭活法和EDTA改良碳青霉烯灭活法(mCIMandeCIM),基于碳青霉烯酶抑制剂的联合圆盘试验(CDT),并将基于胶体金的免疫层析试验与182株CRE的参考方法进行了比较。此外,收集112个临床样品以验证该多重qPCR测定的功效。
    多重qPCR测定的测定内和测定间的标准偏差(CV)为≤0.53%和≤2.04%,用于检测五种主要的碳青霉烯酶基因,分别;而LOD范围从2×102拷贝/mL到8×102拷贝/mL。PCR和DNA测序证实,182个CRE分离物中有168个产生碳青霉烯酶:KPC(n=93),NDM(n=46),IMP(n=8),OXA-48样(n=14),VIM(n=1),KPC&NDM(n=5),和KPC&NDM&IMP(n=1)。mCIMandeCIM的准确性,CDT,胶体金,多重qPCR检测率为96.2%,89.6%,100%,和100%分别用于检测碳青霉烯酶生产者。此外,多重qPCR检测的敏感性和特异性均为100%,用于检测临床样品中的每种碳青霉烯酶基因,与PCR和测序进行比较。
    对于临床分离株检测,多重qPCR检测与胶体金相当,优于mCIMandeCIM和CDT;而对于临床样本检测,它也显示出优异的性能。因此,多重qPCR检测在临床诊断中具有巨大的潜力。
    UNASSIGNED: Carbapenem-resistant Enterobacterales (CRE) infection is an urgent threat to human health. This study aimed to develop and validate a novel multiplex real-time PCR (multi-qPCR) assay for the detection of the blaKPC, blaNDM, blaIMP, blaOXA-48-like, and blaVIM genes in CRE isolates and clinical samples, as well as to compare it with three phenotypic methods.
    UNASSIGNED: The reliability and limit of detection (LOD) of the multi-qPCR assay were evaluated. PCR and DNA sequencing were used as the reference methods to identify carbapenemase genes in CRE isolates and clinical samples. The accuracy of the multi-qPCR assay, modified carbapenem inactivation and EDTA-modified carbapenem inactivation method (mCIMandeCIM), carbapenemase inhibitor-based combined disk test (CDT), and colloidal gold-based immunochromatographic test was compared with the reference methods with 182 isolates of CRE. Furthermore, 112 clinical samples were collected to validate the efficacy of this multi-qPCR assay.
    UNASSIGNED: The standard deviations (CVs) of intra-assay and inter-assay of the multi-qPCR assay were ≤ 0.53% and ≤ 2.04% for detecting the five major carbapenemase genes, respectively; while the LOD ranged from 2×102 copies/mL to 8×102 copies/mL. PCR and DNA sequencing confirmed 168 out of 182 CRE isolates producing carbapenemase(s): KPC (n = 93), NDM (n = 46), IMP (n = 8), OXA-48-like (n = 14), VIM (n = 1), KPC&NDM (n = 5), and KPC&NDM&IMP (n = 1). The accuracy of mCIMandeCIM, CDT, Colloidal Gold, and the multi-qPCR assay was 96.2%, 89.6%, 100%, and 100% respectively for detecting carbapenemase(s) producers. Moreover, the sensitivity and specificity of the multi-qPCR assay were all 100% for the detection of each carbapenemase gene in clinical samples, compared with PCR and sequencing.
    UNASSIGNED: For clinical isolate detection, the multi-qPCR assay is comparable to Colloidal Gold, and superior to mCIMandeCIM and CDT; while for clinical samples detection, it also shows excellent performance. Therefore, the multi-qPCR assay has great potential for clinical diagnosis.
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  • 文章类型: Journal Article
    背景:美国传染病学会(IDSA)致力于为抗菌素耐药性(AMR)感染的治疗提供最新指导。本指导文件侧重于产超广谱β-内酰胺酶肠杆菌(ESBL-E)引起的感染,产AmpCβ-内酰胺酶肠杆菌(AmpC-E),耐碳青霉烯类肠杆菌(CRE),铜绿假单胞菌具有难以治疗的耐药性(DTR铜绿假单胞菌),耐碳青霉烯类鲍曼不动杆菌(CRAB),和嗜麦芽窄食单胞菌.此更新后的文档取代了以前版本的指导文档。
    方法:由6名具有抗菌素耐药性感染管理专长的传染病专家组成的小组提出了有关ESBL-E引起的感染治疗的问题,AmpC-E,CRE,DTR铜绿假单胞菌,CRAB,还有嗜麦芽杆菌.由于国际上AMR的流行病学和特定抗感染药的可用性存在差异,本文件重点介绍美国AMR感染的治疗.
    结果:提供了首选和替代建议的治疗方法以及随附的原理,假设病原体已经被鉴定并且抗生素敏感性结果是已知的。经验性治疗的方法,过渡到口服治疗,治疗持续时间,并简要讨论了其他管理方面的考虑因素。建议的方法适用于成人和儿童人群,尽管建议的抗生素剂量仅提供给成人。
    结论:AMR领域是高度动态的。建议与传染病专家协商治疗AMR感染。本文件截至2023年12月31日,将定期更新。本文档的最新版本,包括发布日期,可在www。idsociety.org/实践指南/amr指导/。
    BACKGROUND: The Infectious Diseases Society of America (IDSA) is committed to providing up-to-date guidance on the treatment of antimicrobial-resistant (AMR) infections. This guidance document focuses on infections caused by extended-spectrum β-lactamase-producing Enterobacterales (ESBL-E), AmpC β- lactamase-producing Enterobacterales (AmpC-E), carbapenem-resistant Enterobacterales (CRE), Pseudomonas aeruginosa with difficult-to-treat resistance (DTR P. aeruginosa), carbapenem-resistant Acinetobacter baumannii (CRAB), and Stenotrophomonas maltophilia. This updated document replaces previous versions of the guidance document.
    METHODS: A panel of six infectious diseases specialists with expertise in managing antimicrobial- resistant infections formulated questions about the treatment of infections caused by ESBL-E, AmpC-E, CRE, DTR P. aeruginosa, CRAB, and S. maltophilia. Because of differences in the epidemiology of AMR and availability of specific anti-infectives internationally, this document focuses on the treatment of AMR infections in the United States.
    RESULTS: Preferred and alternative suggested treatment approaches are provided with accompanying rationales, assuming the causative organism has been identified and antibiotic susceptibility results are known. Approaches to empiric treatment, transitioning to oral therapy, duration of therapy, and other management considerations are discussed briefly. Suggested approaches apply for both adult and pediatric populations, although suggested antibiotic dosages are provided only for adults.
    CONCLUSIONS: The field of AMR is highly dynamic. Consultation with an infectious diseases specialist is recommended for the treatment of AMR infections. This document is current as of December 31, 2023 and will be updated periodically. The most current version of this document, including date of publication, is available at www.idsociety.org/practice-guideline/amr-guidance/.
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  • 文章类型: Journal Article
    耐碳青霉烯的肠杆菌越来越多地被报道并引起医院感染,其中可能包括术后纵隔炎。这里,我们报道了一名患有DiGeorge综合征的13个月男童,由大肠杆菌NDM-1碳青霉烯酶生产者引起的术后纵隔炎.感染通过手术清创和氨曲南的抗生素治疗来管理,头孢他啶-阿维巴坦和静脉注射磷霉素6周。随访10周,进展良好,无复发。
    Carbapenem-resistant Enterobacterales are being reported increasingly and cause nosocomial infections, which may include postoperative mediastinitis. This paper reports a case of postoperative mediastinitis caused by an Escherichia coli NDM-1 carbapenemase producer in a 13-month-old boy with DiGeorge syndrome. The infection was managed with surgical debridement and antibiotherapy with aztreonam, ceftazidime-avibactam and IV fosfomycin for 6 weeks. The evolution was favourable, without relapse over 10 weeks of follow-up.
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  • 文章类型: Journal Article
    背景/目标:在各种碳青霉烯酶中,新德里金属β-内酰胺酶(NDM)被认为是能够水解所有β-内酰胺抗生素的最强大类型,通常赋予微生物多药抗性。这篇综述的目的是综合当前有关NDM抑制剂的科学数据,以促进未来治疗具有挑战性的病原体的治疗方法的开发。方法:遵循系统评价和荟萃分析(PRISMA)扩展的首选报告项目,从2009年初到2022年12月,我们对相关关键词的文章进行了MEDLINE搜索。我们采用了各种通用术语来涵盖所有关于潜在NDM抑制剂的文献。结果:在通过数据库搜索确定的1760篇文章中,91符合资格标准,并被纳入我们的分析。使用棋盘分析法对37篇文章中的47种化合物进行了部分抑制浓度指数评估,其中包括8种已经被美国食品和药物管理局(FDA)批准的化合物。时间杀死曲线测定(14项研究,25%),动力学测定(15项研究,40.5%),分子调查(25项研究,67.6%),体内研究(14项研究,37.8%),和毒性测定(13项研究,35.1%)还进行了加强潜在抑制剂的实验室水平证据。它们似乎都没有应用于人类感染。结论:正在进行的研究工作已经确定了几种潜在的NDM抑制剂;然而,目前没有临床适用的药物。为了解决这个问题,我们必须通过拓宽自己的视野来促进跨学科和多方面的合作。
    Background/Objectives: Among various carbapenemases, New Delhi metallo-beta-lactamases (NDMs) are recognized as the most powerful type capable of hydrolyzing all beta-lactam antibiotics, often conferring multi-drug resistance to the microorganism. The objective of this review is to synthesize current scientific data on NDM inhibitors to facilitate the development of future therapeutics for challenging-to-treat pathogens. Methods: Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) Extension for Scoping Reviews, we conducted a MEDLINE search for articles with relevant keywords from the beginning of 2009 to December 2022. We employed various generic terms to encompass all the literature ever published on potential NDM inhibitors. Results: Out of the 1760 articles identified through the database search, 91 met the eligibility criteria and were included in our analysis. The fractional inhibitory concentration index was assessed using the checkerboard assay for 47 compounds in 37 articles, which included 8 compounds already approved by the Food and Drug Administration (FDA) of the United States. Time-killing curve assays (14 studies, 25%), kinetic assays (15 studies, 40.5%), molecular investigations (25 studies, 67.6%), in vivo studies (14 studies, 37.8%), and toxicity assays (13 studies, 35.1%) were also conducted to strengthen the laboratory-level evidence of the potential inhibitors. None of them appeared to have been applied to human infections. Conclusions: Ongoing research efforts have identified several potential NDM inhibitors; however, there are currently no clinically applicable drugs. To address this, we must foster interdisciplinary and multifaceted collaborations by broadening our own horizons.
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  • 文章类型: Journal Article
    耐碳青霉烯类肠杆菌(CRE)中碳青霉烯酶的分布最近在我们地区发生了变化。根据哥伦比亚国家卫生研究所,NDM和NDM-KPC共产菌株的患病率越来越高。我们对圣伊格纳西奥大学医院(2021-2023年)的成年住院患者进行了一项综合队列研究,感染或定植于CRE,其中进行了碳青霉烯酶免疫层析测定。在纳入研究的150名患者中,71.3%出现感染,碳青霉烯酶在这些病例中检测到92.7%。其中,KPC占主导地位(54%),16.7%的人表现出酶的协同作用,主要是KPC-NDM。感染CRE的患者30天死亡率为18.7%,但我们无法证明碳青霉烯酶类型与死亡率之间存在关联(p=0.82).Logistic回归分析提示ICU入院与病死率独立相关(OR5.08;CI1.68-16.01)。NDM和KPC-NDM在CRE中的存在构成了公共卫生威胁和治疗挑战,根据碳青霉烯酶模式,死亡率差异未知。然而,酶类型和死亡率之间没有关联.
    The distribution of carbapenemases in Carbapenem-Resistant Enterobacterales (CRE) has recently undergone a change in our region. According to the Colombian National Institute of Health, there is an increasing prevalence of NDM and NDM-KPC co-producing strains. We carried-out an ambispective cohort study of adult inpatients from Hospital Universitario San Ignacio (2021-2023), infected or colonized with CRE, in which carbapenemases immunochromatographic assay was performed. Out of the 150 patients included in the study, 71.3 % presented with an infection, and carbapenemases were detected in 92.7 % of these cases. Among them, KPC predominated (54 %), while 16.7 % demonstrated enzyme coproductions, mainly KPC-NDM. CRE infected patients had an 18.7 % 30-days mortality, but we could not demonstrate an association between type of carbapenemase and mortality rate (p = 0.82). Logistic regression analysis suggested that ICU admission was independently correlated to fatality (OR 5.08; CI 1.68-16.01). NDM and KPC-NDM presence in CRE poses a public health threat and a therapeutic challenge, with unknown mortality differences according to the carbapenemases pattern. Nevertheless, there was not an association between enzyme type and mortality.
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