Self-sorting

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  • 文章类型: Journal Article
    具有各向异性腔的基于Pd(II)的低对称性配位笼引起了极大的兴趣。用于实现此类笼子的常见策略利用了一种以上类型的对称配体(例如,Laa,Lbb,等。)或仅一种类型的不对称配体(例如,实验室)。为了显著增强各向异性,我们设计了两个不对称的双齿配体,即,实验室和Lcd,瞄准低对称性Pd2Lab2Lcd2型保持架。这是通过具有Pd2Lab4和Pd4Lcd8型结构(所设计配体的同质配合物)的两个不同的低对称笼的高保真集成自分选来实现的。配体设计中的结构约束和几何互补性驱动Pd2Lab2Lcd2型笼的非统计排他性自组装。通过利用配体之间的互补几何形状,还获得了低对称性Pd2Lab2Lcc2型笼。通过笼到笼的转换,证明了将三个同型装配体(Pd2Lab4,Pd4Lcc8和Pd4Lcd8型笼)异聚完成自分类为Pd2Lab2Lcd2和Pd2Lab2Lcc2型混合结扎装配体的独家混合物。
    Pd(II)-based low-symmetry coordination cages possessing anisotropic cavities are of great interest. The common strategies employed to achieve such cages utilize either more than one type of symmetrical ligands (e.g., Laa, Lbb, etc.) or only one type of unsymmetrical ligand (e.g., Lab). To significantly enhance the anisotropy, we have designed two unsymmetrical bidentate ligands i.e., Lab and Lcd, aiming a low-symmetry Pd2Lab2Lcd2-type cage. It was accomplished by high-fidelity integrative self-sorting of two different low-symmetry cages having Pd2Lab4 and Pd4Lcd8-type architectures (homoleptic complexes of the designed ligands). Structural constraints and geometry complementarity in the ligand design drive the non-statistical exclusive self-assembly of the Pd2Lab2Lcd2-type cage. By taking advantage of the complemental geometries between ligands, a low-symmetry Pd2Lab2Lcc2-type cage was also obtained. Heteromeric completive self-sorting of three homoleptic assemblies (Pd2Lab4, Pd4Lcc8 and Pd4Lcd8-type cages) into an exclusive mixture of Pd2Lab2Lcd2 and Pd2Lab2Lcc2-type mixed ligated assemblies was demonstrated through cage-to-cage transformations.
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  • 文章类型: Journal Article
    最近,π-π堆叠的反芳族π系统受到了相当大的关注,因为它们由于大量的分子间轨道相互作用而表现出堆叠环芳香性。这里,我们报道了三种抗芳族去甲吡咯二聚体,它们通过手性自分选自组装形成超分子结构。具有3,5-二叔丁基苯基的2,2'-连接的降吡咯二聚体通过同手性自分选在固态和溶液状态下形成π堆叠的二聚体。其在溶液中的缔合常数在20℃时为(3.6±1.7)×105M-1。在固态下,具有3,5-二叔丁基苯基和苯基的3,3'-连接的去甲吡咯二聚体通过杂手性和同手性自分选提供大环和螺旋超分子组装,分别。值得注意的是,取代基的细微修饰导致聚集体结构和手性自分选模式的完全改变。本发现表明,基于反芳族π系统之间的有吸引力的相互作用,反芳族单体单元中的结构操纵导致各种超分子组装体的形成。
    Recently, π-π stacked antiaromatic π-systems have received considerable attention because they can exhibit stacked-ring aromaticity due to substantial intermolecular orbital interactions. Here, we report three antiaromatic norcorrole dimers that self-assemble to form supramolecular architectures through chiral self-sorting. A 2,2\'-linked norcorrole dimer with 3,5-di-tert-butylphenyl groups forms a π-stacked dimer both in solid and solution states via homochiral self-sorting. Its association constant in solution is (3.6±1.7)×105 M-1 at 20 °C. In the solid state, 3,3\'-linked norcorrole dimers with 3,5-di-tert-butylphenyl and phenyl groups afford macrocyclic and helical supramolecular assemblies via heterochiral and homochiral self-sorting, respectively. Notably, the subtle modification in the substituent resulted in a complete change in the structure of the aggregates and the chiral self-sorting mode. The present findings demonstrate that structural manipulation in antiaromatic monomer units leads to the formation of various supramolecular assemblies on the basis of the attractive interactions between antiaromatic π-systems.
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  • 文章类型: Journal Article
    当多于一个可逆反应开始起作用时,产生化合物的多个动态库。通常,使用两个或多个正交可逆反应,导致不共享构建块的非通信动态库。只报道了几个交流库的例子,在所有这些情况下,积木从一个图书馆可逆地交换到另一个图书馆,构成一个反平行的动态共价系统。在这里,我们报告说,通过不可逆的过程,两个不同的动态库之间的通信也是可能的。的确,烷基胺取消了四嗪亲核取代的动力学机制,产生动力学惰性化合物。有趣的是,这种胺可以是另一个动态库的一部分,亚胺-胺交换。因此,两个库通过不可逆的过程相互连接,从而产生包含两个库的部分的动力学惰性结构,导致复杂性的崩溃。此外,可以发展潜在的不可逆转的相互交流。以这样的方式,具有特定主客体和荧光性质的稳定分子体系,当施加正确的刺激时,可能会不可逆转地改变,引发了原有的超分子和发光特性的取消和新的发光特性的出现。
    Multiple dynamic libraries of compounds are generated when more than one reversible reaction comes into play. Commonly, two or more orthogonal reversible reactions are used, leading to non-communicating dynamic libraries which share no building blocks. Only a few examples of communicating libraries have been reported, and in all those cases, building blocks are reversibly exchanged from one library to the other, constituting an antiparallel dynamic covalent system. Herein we report that communication between two different dynamic libraries through an irreversible process is also possible. Indeed, alkyl amines cancel the dynamic regime on the nucleophilic substitution of tetrazines, generating kinetically inert compounds. Interestingly, such amine can be part of another dynamic library, an imine-amine exchange. Thus, both libraries are interconnected with each other by an irreversible process which leads to kinetically inert structures that contain parts from both libraries, causing a collapse of the complexity. Additionally, a latent irreversible intercommunication could be developed. In such a way, a stable molecular system with specific host-guest and fluorescence properties, could be irreversibly transformed when the right stimulus was applied, triggering the cancellation of the original supramolecular and luminescent properties and the emergence of new ones.
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  • 文章类型: Journal Article
    背景:在生物纳米技术和其他领域中,已经广泛研究了由低分子量胶凝剂(LMWG)构建凝胶的方法。然而,理解上的差距仍然阻碍了从这些凝胶系统的完整设计中预测LMWG。由于复合凝胶系统中存在多种干扰效应,因此具有多组分的凝胶变得更加复杂。
    目的:这篇综述强调了对多组分低分子量凝胶(MLMWGs)理解的系统观点,并总结了MLMWG理想网络建设的最新进展,包括自分类和共同组装,以及理解MLMWG的挑战和方法,希望来自天然产物和肽的机会可以加快理解过程,缩小结构设计和预测之间的差距。
    这篇综述集中在三个关键概念上。首先,了解复杂的多组分凝胶系统需要MLMWG的系统观点。其次,几种方案可用于控制这些多组分凝胶系统中的自分选和共组装行为,包括某些互补结构,手性诱导和动态控制。第三,讨论以理解MLMWG的挑战和策略为基础,并提供了一些例子来理解由小型天然产物和微妙设计的短肽构成的多组分凝胶。
    BACKGROUND: The construction of gels from low molecular weight gelators (LMWG) has been extensively studied in the fields of bio-nanotechnology and other fields. However, the understanding gaps still prevent the prediction of LMWG from the full design of those gel systems. Gels with multicomponent become even more complicated because of the multiple interference effects coexist in the composite gel systems.
    OBJECTIVE: This review emphasizes systems view on the understanding of multicomponent low molecular weight gels (MLMWGs), and summarizes recent progress on the construction of desired networks of MLMWGs, including self-sorting and co-assembly, as well as the challenges and approaches to understanding MLMWGs, with the hope that the opportunities from natural products and peptides can speed up the understanding process and close the gaps between the design and prediction of structures.
    UNASSIGNED: This review is focused on three key concepts. Firstly, understanding the complicated multicomponent gels systems requires a systems perspective on MLMWGs. Secondly, several protocols can be applied to control self-sorting and co-assembly behaviors in those multicomponent gels system, including the certain complementary structures, chirality inducing and dynamic control. Thirdly, the discussion is anchored in challenges and strategies of understanding MLMWGs, and some examples are provided for the understanding of multicomponent gels constructed from small natural products and subtle designed short peptides.
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  • 文章类型: Journal Article
    在主客体系统中加入手性元素目前备受关注,这是由这种结构可能对广泛的应用产生的重大影响造成的,从制药到材料科学等等。此外,多响应和功能系统的发展是非常可取的,因为它们提供了许多好处。在这种情况下,本文中,我们描述了金属驱动的自组装笼的构造,其将手性基于辉石的配体和双钌络合物相关联。组件中两个面对的手性单元之间的最大间距由横向双钌络合物内的金属间距离(8.4进行)固定。所产生的手性腔被证明可以封装多芳族客体分子,而且还提供了手性三互锁[2]catenane结构。后者的形成发生在高浓度,而其分解可以通过添加平面非手性分子来实现。有趣的是,当被捕获在手性腔内时,后者表现出诱导的圆二色性特征,证明了诱导超分子体外发生的笼子能力。
    Incorporating chiral elements in host-guest systems currently attracts much attention because of the major impact such structures may have in a wide range of applications, from pharmaceuticals to materials science and beyond. Moreover, the development of multi-responsive and -functional systems is highly desirable since they offer numerous benefits. In this context, we describe herein the construction of a metal-driven self-assembled cage that associates a chiral truxene-based ligand and a bis-ruthenium complex. The maximum separation between both facing chiral units in the assembly is fixed by the intermetallic distance within the lateral bis-ruthenium complex (8.4 Å). The resulting chiral cavity was shown to encapsulate polyaromatic guest molecules, but also to afford a chiral triply interlocked [2]catenane structure. The formation of the latter occurs at high concentration, while its disassembly could be achieved by the addition of a planar achiral molecule. Interestingly the planar achiral molecule exhibits induced circular dichroism signature when trapped within the chiral cavity, thus demonstrating the ability of the cage to induce supramolecular chirogenesis.
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  • 文章类型: Journal Article
    在复杂的反应系统中通常观察到自分选,它已被用来指导单一主要设计分子的形成。然而,大多数研究都集中在非共价系统上,和使用自分类来实现共价键合的结构仍然相对较少的探索。在这项工作中,我们首先证明了螺硼酸盐连接的动态性质,并系统地研究了在螺硼酸盐连接的明确聚合物和分子结构之间的转化中观察到的自分选行为,这是通过螺硼酸盐键交换实现的。大环和一维螺旋共价聚合物之间的混乱导致分子笼的形成,其结构均通过单晶X射线衍射明确阐明。结果表明,在这种多组分反应体系中,分子笼是热力学上有利的产物。这项工作代表了一维聚合物结构转变为形状持久的分子笼的第一个例子,由动态共价自分选驱动。这项研究将进一步指导螺硼酸盐基材料的设计,并为开发新的复杂而响应的动态共价分子或聚合物系统开辟可能性。
    Self-sorting is commonly observed in complex reaction systems, which has been utilized to guide the formation of single major by-design molecules. However, most studies have been focused on non-covalent systems, and using self-sorting to achieve covalently bonded architectures is still relatively less explored. Herein, we first demonstrated the dynamic nature of spiroborate linkage and systematically studied the self-sorting behavior observed in the transformation between spiroborate-linked well-defined polymeric and molecular architectures, which is enabled by spiroborate bond exchange. The scrambling between a macrocycle and a 1D helical covalent polymer led to the formation of a molecular cage, whose structures are all unambiguously elucidated by single-crystal X-ray diffraction. The results indicate that the molecular cage is the thermodynamically favored product in this multi-component reaction system. This work represents the first example of a 1D polymeric architecture transforming into a shape-persistent molecular cage, driven by dynamic covalent self-sorting. This study will further guide the design of spiroborate-based materials and open the possibilities for the development of novel complex yet responsive dynamic covalent molecular or polymeric systems.
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  • 文章类型: Journal Article
    来自噬菌体P22的病毒样颗粒(VLP)已被用作仿生催化区室。P22VLP内的酶的体内共定位使用与支架蛋白的顺序融合,导致等摩尔浓度的酶单体。然而,控制酶的化学计量,已经被证明会影响通路通量,是实现P22VLP作为人工代谢产物的全部潜力的关键。我们提出了一种可调节的策略,用于对P22货物蛋白的体内共封装进行化学计量控制,通过Förster共振能量转移验证了荧光蛋白货物。然后将其应用于双酶反应级联。l-高丙氨酸,一种非天然氨基酸和几种药物的手性前体,可以通过苏氨酸脱水酶和谷氨酸脱氢酶的顺序活性从容易获得的1-苏氨酸合成。我们发现两种酶的加载密度都会影响它们的活性,在较低的加载密度下发现较高的活性,这意味着分子拥挤对酶活性的影响。相反,通过增加苏氨酸脱水酶的量来增加总负载密度可以增加限速谷氨酸脱氢酶的活性。这项工作证明了多种异源货物蛋白在基于P22的纳米反应器中的体内共定位,并显示了酶级联中单个酶的受控化学计量是纳米级生物催化隔室的最佳设计所必需的。
    Virus-like particles (VLPs) derived from bacteriophage P22 have been explored as biomimetic catalytic compartments. In vivo colocalization of enzymes within P22 VLPs uses sequential fusion to the scaffold protein, resulting in equimolar concentrations of enzyme monomers. However, control over enzyme stoichiometry, which has been shown to influence pathway flux, is key to realizing the full potential of P22 VLPs as artificial metabolons. We present a tunable strategy for stoichiometric control over in vivo co-encapsulation of P22 cargo proteins, verified for fluorescent protein cargo by Förster resonance energy transfer. This was then applied to a two-enzyme reaction cascade. l-homoalanine, an unnatural amino acid and chiral precursor to several drugs, can be synthesized from the readily available l-threonine by the sequential activity of threonine dehydratase and glutamate dehydrogenase. We found that the loading density of both enzymes influences their activity, with higher activity found at lower loading density implying an impact of molecular crowding on enzyme activity. Conversely, increasing overall loading density by increasing the amount of threonine dehydratase can increase activity from the rate-limiting glutamate dehydrogenase. This work demonstrates the in vivo colocalization of multiple heterologous cargo proteins in a P22-based nanoreactor and shows that controlled stoichiometry of individual enzymes in an enzymatic cascade is required for the optimal design of nanoscale biocatalytic compartments.
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  • 文章类型: Journal Article
    与相应的单组分体系相比,多组分超分子体系可用于实现不同的性能和新行为。这里,我们使用两组分系统,表明非胶凝组分改变了胶凝组分的组装,允许接近不能单独由胶凝组分形成的共组装结构。我们描述了跨多个长度尺度的系统,从分子水平通过核磁共振和CD光谱,通过SANS达到微观结构水平,最后使用纳米压痕和流变学达到材料水平。通过利用通过添加第二组分而获得的增强的机械性能,我们形成的多组分面条具有优于单组分体系形成的机械性能。此外,可以触发非胶凝组分在多组分面条内结晶,让我们准备新类型的分层复合面条。本文受版权保护。保留所有权利。
    Multicomponent supramolecular systems can be used to achieve different properties and new behaviors compared to their corresponding single component systems. Here, a two-component system is used, showing that a non-gelling component modifies the assembly of the gelling component, allowing access to co-assembled structures that cannot be formed from the gelling component alone. The systems are characterized across multiple length scales, from the molecular level by NMR and CD spectroscopy to the microstructure level by SANS and finally to the material level using nanoindentation and rheology. By exploiting the enhanced mechanical properties achieved through addition of the second component, multicomponent noodles are formed with superior mechanical properties to those formed by the single-component system. Furthermore, the non-gelling component can be triggered to crystallize within the multicomponent noodles, allowing the preparation of new types of hierarchical composite noodles.
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  • 文章类型: Journal Article
    配位化学是合成具有适合特定应用的独特特征的超分子笼的强大方法。这项工作展示了离散的合成,同向FeII2L3笼通过手性驱动的自组装。具体来说,手性的安装-在顶点和配体骨架-允许形成离散的,通过对铁(II)中心的立体化学控制,具有不同大小的纯手性FeII2L3笼子。我们观察到较大的笼需要多个手性中心(手性配体和顶点)。相比之下,较小的笼的形成是立体选择性的,只有手性配体。后者的笼子也可以由两个手性亚组分形成,但只有当他们反对匹配的手性时。这些较小的FeII2L3笼的单晶X射线衍射揭示了几种非共价相互作用,称为自恋性手性自分选的驱动力。利用外消旋形式的较短配体证实了这种预期的行为,屈服离散,对映体对中的同手性FeII2L3笼。
    Coordination chemistry is a powerful method to synthesize supramolecular cages with distinct features that suit specific applications. This work demonstrates the synthesis of discrete, homochiral FeII 2 L3 cages via chirality-driven self-assembly. Specifically, the installation of chirality - at both the vertices and ligand backbones - allows the formation of discrete, homochiral FeII 2 L3 cages of different sizes via stereochemical control of the iron(II) centers. We observed that larger cages require multiple chiral centra (chiral ligands and vertices). In contrast, the formation of smaller cages is stereoselective with solely chiral ligands. The latter cages can also be formed from two chiral subcomponents, but only when they have matching chirality. Single-crystal X-ray diffraction of these smaller FeII 2 L3 cages revealed several non-covalent interactions as a driving force for narcissistic chiral self-sorting. This expected behavior was confirmed utilizing the shorter ligands in racemic form, yielding discrete, homochiral FeII 2 L3 cages formed in enantiomeric pairs.
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  • 文章类型: Journal Article
    被编程为折叠成稳定的螺旋构象的芳香族寡酰胺序列被设计为在其表面显示氢键供体和受体的线性阵列。在固相合成上合成序列。溶液1HNMR光谱研究和固态晶体学结构表明,形成了稳定的氢键介导的二聚体螺旋束,该束可以是异手性的(具有P和M螺旋)或同手性的(具有两个P或两个M螺旋)。可以使用不同的氯化溶剂定量驱动异质或同向二聚体的形成-举例说明了社交或自恋性手性自分类的显着情况,或者对螺旋施加绝对的惯用性以禁止PM物种。
    Aromatic oligoamide sequences programmed to fold into stable helical conformations were designed to display a linear array of hydrogen-bond donors and acceptors at their surface. Sequences were prepared by solid-phase synthesis. Solution 1 H NMR spectroscopic studies and solid-state crystallographic structures demonstrated the formation of stable hydrogen-bond-mediated dimeric helix bundles that could be either heterochiral (with a P and an M helix) or homochiral (with two P or two M helices). Formation of the hetero- or homochiral dimers could be driven quantitatively using different chlorinated solvents-exemplifying a remarkable case of either social or narcissistic chiral self-sorting or upon imposing absolute handedness to the helices to forbid PM species.
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