RTK

RTK
  • 文章类型: Journal Article
    实时动态全球导航卫星系统(RTK-GNSS)是当前快速轻松实现厘米级精度的首要技术。然而,RTK-GNSS的鲁棒性在具有挑战性的环境中由于严重的多径效应和有限数量的可用GNSS信号而降低。这是一个紧迫的问题,特别是导航行业的GNSS用户。本文提出并评估了通过提高RTK-GNSS解决方案在城市环境中的可用性和可靠性来克服这些问题的几种方法。我们的新颖方法涉及将传统方法与一种新技术相结合,该技术利用多余的卫星-最初未用于定位的卫星-更可靠地检测不正确的修复解决方案。我们在东京地区密集的建筑区域进行了三项测试。结果表明,我们的方法不仅超过了最新的商业接收器和流行的开源RTK-GNSS程序的固定速率,而且还将位置可靠性提高到与上述商业技术相当或超过的水平。
    Real-Time Kinematic Global Navigation Satellite System (RTK-GNSS) is currently the premier technique for achieving centimeter-level accuracy quickly and easily. However, the robustness of RTK-GNSS diminishes in challenging environments due to severe multipath effects and a limited number of available GNSS signals. This is a pressing issue, especially for GNSS users in the navigation industry. This paper proposes and evaluates several methodologies designed to overcome these issues by enhancing the availability and reliability of RTK-GNSS solutions in urban environments. Our novel approach involves the integration of conventional methods with a new technique that leverages surplus satellites-those not initially used for positioning-to more reliably detect incorrect fix solutions. We conducted three tests in densely built-up areas within the Tokyo region. The results demonstrate that our approach not only surpasses the fix rate of the latest commercial receivers and a popular open-source RTK-GNSS program but also improves positional reliability to levels comparable to or exceeding those of the aforementioned commercial technology.
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  • 文章类型: Journal Article
    正常受体酪氨酸激酶(RTK)需要到达质膜(PM)以进行配体诱导的激活,而其致癌突变体可以在到达细胞器的PM之前被激活,例如高尔基/跨高尔基网络(TGN)。来自内质网(ER)的蛋白质输出抑制剂,如brefeldinA(BFA)和2-甲基亲原酰胺(M-COPA),可以抑制癌细胞中突变RTK的激活,表明RTK突变体不能在ER中启动信号传导。BFA和M-COPA阻断在ER-高尔基体蛋白运输中起关键作用的ADP-核糖基化因子(ARFs)的功能。然而,在ARF家族蛋白中,BFA或M-COPA抑制的特定ARF,也就是说,从ER传输RTK所涉及的ARF,仍然不清楚。在这项研究中,我们表明,M-COPA不仅阻断了试剂盒的输出,而且还阻断了PDGFRA/EGFR/METRTK从ER的输出。ER保留的RTK不能完全转导抗凋亡信号,从而导致癌细胞凋亡。此外,ARF1、ARF3、ARF4、ARF5或ARF6的单次击倒不能阻止RTK的ER输出,表明BFA/M-COPA治疗不能通过仅一个ARF成员的击倒来模仿。有趣的是,同时转染ARF1、ARF4和ARF5siRNA反映了BFA/M-COPA处理的效果。与这些结果一致,体外下拉实验显示BFA/M-COPA阻断ARF1、ARF4和ARF5的功能。一起来看,这些结果表明,BFA/M-COPA至少靶向ARF1,ARF4和ARF5;换句话说,RTK需要同时激活ARF1、ARF4和ARF5来导出它们的ER。
    Normal receptor tyrosine kinases (RTKs) need to reach the plasma membrane (PM) for ligand-induced activation, whereas its cancer-causing mutants can be activated before reaching the PM in organelles, such as the Golgi/trans-Golgi network (TGN). Inhibitors of protein export from the endoplasmic reticulum (ER), such as brefeldin A (BFA) and 2-methylcoprophilinamide (M-COPA), can suppress the activation of mutant RTKs in cancer cells, suggesting that RTK mutants cannot initiate signaling in the ER. BFA and M-COPA block the function of ADP-ribosylation factors (ARFs) that play a crucial role in ER-Golgi protein trafficking. However, among ARF family proteins, the specific ARFs inhibited by BFA or M-COPA, that is, the ARFs involved in RTKs transport from the ER, remain unclear. In this study, we showed that M-COPA blocked the export of not only KIT but also PDGFRA/EGFR/MET RTKs from the ER. ER-retained RTKs could not fully transduce anti-apoptotic signals, thereby leading to cancer cell apoptosis. Moreover, a single knockdown of ARF1, ARF3, ARF4, ARF5, or ARF6 could not block ER export of RTKs, indicating that BFA/M-COPA treatment cannot be mimicked by the knockdown of only one ARF member. Interestingly, simultaneous transfection of ARF1, ARF4, and ARF5 siRNAs mirrored the effect of BFA/M-COPA treatment. Consistent with these results, in vitro pulldown assays showed that BFA/M-COPA blocked the function of ARF1, ARF4, and ARF5. Taken together, these results suggest that BFA/M-COPA targets at least ARF1, ARF4, and ARF5; in other words, RTKs require the simultaneous activation of ARF1, ARF4, and ARF5 for their ER export.
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  • 文章类型: Journal Article
    CSF1R是一种受体酪氨酸激酶,负责巨噬细胞的生长/存活/极化,并在一些AML患者中过表达。我们假设一种新型的多激酶抑制剂(TKi),纳拉沙利布(HX301/ON123300),对CSF1R具有高效力(IC50〜0.285nM),会产生抗AML效果。我们通过证实HX301对CSF1R的高效(IC50~0.285nM)进行了测试,以及其他激酶,例如FLT3(IC50为~19.77nM)和CDK6(0.53nM)。体外增殖试验表明,在CSF1R或突变型FLT3-ITD变体可能是增殖驱动因素的细胞培养物中,那拉齐利布具有很高的生长抑制作用,包括原代巨噬细胞(IC50为72.5nM)和AML系的子集(IC50<1.5μM)。使用五种AML异种移植物对那拉齐尼进行体内药理学建模,导致:抑制MV4-11(FLT3-ITD)皮下肿瘤生长和完全抑制AM7577-PDX(FLT3-ITD/CSF1Rmed)全身生长,可能是由于抑制FLT3-ITD活性;完全抑制AM8096-PDX(CSF1Rhi/野生型FLT3)生长,可能是由于CSF1R(“推定驱动因素”)的抑制;AM5512-PDX和AM7407-PDX(野生型FLT3/CSF1Rlo)均无反应。白血病骨髓负荷显著减少,疾病起源的地方,在两个响应者中也实现了(AM7577/AM8096),暗示HX301可能比仅影响外周白血病细胞的治疗更有效。总之,纳拉沙尼布可能是治疗患有CSF1Rhi和/或突变型FLT3-ITD的AML亚群的候选药物,特别是第二代FLT3抑制剂抗性变体。
    CSF1R is a receptor tyrosine kinase responsible for the growth/survival/polarization of macrophages and overexpressed in some AML patients. We hypothesized that a novel multi-kinase inhibitor (TKi), narazaciclib (HX301/ON123300), with high potency against CSF1R (IC50 ~ 0.285 nM), would have anti-AML effects. We tested this by confirming HX301\'s high potency against CSF1R (IC50 ~ 0.285 nM), as well as other kinases, e.g. FLT3 (IC50 of ~ 19.77 nM) and CDK6 (0.53 nM). An in vitro proliferation assay showed that narazaciclib has a high growth inhibitory effect in cell cultures where CSF1R or mutant FLT3-ITD variants that may be proliferation drivers, including primary macrophages (IC50 of 72.5 nM) and a subset of AML lines (IC50 < 1.5 μM). In vivo pharmacology modeling of narazaciclib using five AML xenografts resulted in: inhibition of MV4-11 (FLT3-ITD) subcutaneous tumor growth and complete suppression of AM7577-PDX (FLT3-ITD/CSF1Rmed) systemic growth, likely due to the suppression of FLT3-ITD activity; complete suppression of AM8096-PDX (CSF1Rhi/wild-type FLT3) growth, likely due to the inhibition of CSF1R (\"a putative driver\"); and nonresponse of both AM5512-PDX and AM7407-PDX (wild-type FLT3/CSF1Rlo). Significant leukemia load reductions in bone marrow, where disease originated, were also achieved in both responders (AM7577/AM8096), implicating that HX301 might be a potentially more effective therapy than those only affecting peripheral leukemic cells. Altogether, narazaciclib can potentially be a candidate treatment for a subset of AML with CSF1Rhi and/or mutant FLT3-ITD variants, particularly second generation FLT3 inhibitor resistant variants.
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  • 文章类型: Journal Article
    癌症仍然是世界范围内死亡的主要原因,需要新的治疗靶点。膜蛋白是各种癌症类型的关键参与者,但与可溶性蛋白相比,它们面临着独特的挑战。计算药物发现工具的出现为解决这些挑战提供了一种有前途的方法,允许优先考虑“湿实验室”实验。在这次审查中,我们探索计算方法在膜蛋白肿瘤表征中的应用,特别关注三个突出的膜蛋白家族:受体酪氨酸激酶(RTK),G蛋白偶联受体(GPCRs),和溶质载体蛋白(SLC)。我们选择这些家庭是因为他们的理解水平和研究数据可用性不同,这给计算分析带来了不同的挑战和机遇。我们讨论了多组数据的利用,机器学习,和基于结构的方法来研究与每个家族中癌症进展相关的异常蛋白质功能。此外,我们强调了考虑更广泛的细胞环境的重要性,特别是,蛋白质之间的交叉对话。尽管存在挑战,计算工具有望在癌症中解剖膜蛋白失调。随着计算能力和数据资源的不断发展,这些工具有望在识别和优先考虑膜蛋白作为个性化抗癌靶标方面发挥关键作用。
    Cancer remains a leading cause of mortality worldwide and calls for novel therapeutic targets. Membrane proteins are key players in various cancer types but present unique challenges compared to soluble proteins. The advent of computational drug discovery tools offers a promising approach to address these challenges, allowing for the prioritization of \"wet-lab\" experiments. In this review, we explore the applications of computational approaches in membrane protein oncological characterization, particularly focusing on three prominent membrane protein families: receptor tyrosine kinases (RTKs), G protein-coupled receptors (GPCRs), and solute carrier proteins (SLCs). We chose these families due to their varying levels of understanding and research data availability, which leads to distinct challenges and opportunities for computational analysis. We discuss the utilization of multi-omics data, machine learning, and structure-based methods to investigate aberrant protein functionalities associated with cancer progression within each family. Moreover, we highlight the importance of considering the broader cellular context and, in particular, cross-talk between proteins. Despite existing challenges, computational tools hold promise in dissecting membrane protein dysregulation in cancer. With advancing computational capabilities and data resources, these tools are poised to play a pivotal role in identifying and prioritizing membrane proteins as personalized anticancer targets.
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  • 文章类型: Journal Article
    低成本智能终端的性能受到其低成本全球导航卫星系统(GNSS)硬件和芯片性能的限制,以及复杂城市环境的影响,影响GNSS服务的定位精度和稳定性。为此,本文提出了一种适用于不同环境的鲁棒自适应卡尔曼滤波器,经过数据预处理后可以应用。基于卡尔曼滤波算法,在实时运动学(RTK)定位中引入一种鲁棒估计方法,对低成本智能终端的异常观测值进行判断,放大了异常观测方程的方差和协方差,并减少异常值对定位性能的影响。大地测量和地球物理研究所III(IGGIII)功能用于调节目的,其中使用等效权重矩阵和自适应因子修改和刷新先验信息,从而降低了系统模型误差对系统状态估计结果的影响。此外,定义了一个稳健因子来调整测试前和测试后稳健估计之间的定位偏差权重。实验结果表明,在静态实验中经过稳健的RTK定位,小米8、华为P40、华为mate40和低成本M8接收器的定位精度整体提高达到29.6%,31.3%,32.1%,和30.7%,分别。同样,在动态实验中应用所提出的鲁棒方法后,小米8、华为P40、华为mate40和低成本M8接收器的整体定位精度提高了28.3%,32.9%,35.4%,和26.2%,分别。实验结果表明,智能手机的出色定位效果与强大的RTK定位性能正相关。然而,值得注意的是,当定位精度达到较高水平时,例如使用低成本接收器实现的定位结果,鲁棒性能呈现相对下降的趋势。这一发现表明,在定位精度高的情况下,特定定位设备对干扰源的灵敏度可能会增加,导致鲁棒RTK定位效果下降。
    The performance of low-cost smart terminals is limited by the performance of their low-cost Global Navigation Satellite System (GNSS) hardware and chips, as well as by the impact of complex urban environments, which affect the positioning accuracy and stability of GNSS services. To this end, this paper proposes a robust adaptive Kalman filter for different environments that can be applied after data preprocessing. Based on the Kalman filter algorithm, a robust estimation approach is introduced into real-time kinematic (RTK) positioning to make judgments on the abnormal observation values of low-cost smart terminals, which amplifies the variance and covariance of the outlier observation equation, and reduces the impact of outliers on positioning performance. The Institute of Geodesy and Geophysics III (IGG III) function is used for regulation purposes, where prior information is modified and refreshed using the equivalent weight matrix and adaptive factors, thus reducing the impact of system model errors on system state estimation results. In addition, a robust factor is defined to adjust positioning deviation weighting between the pre- and post-test robust estimates. The experimental results show that after robust RTK positioning in the static experiments, the overall improvement in positioning accuracies of the Xiaomi 8, Huawei P40, Huawei mate40, and low-cost M8 receiver reached 29.6%, 31.3%, 32.1%, and 30.7%, respectively. Similarly, after applying the proposed robust method in the dynamic experiments, the overall positioning accuracies of the Xiaomi 8, Huawei P40, Huawei mate40, and the low-cost M8 receiver improved by 28.3%, 32.9%, 35.4%, and 26.2%, respectively. The experimental results reveal that an excellent positioning effect of a smartphone is positively correlated with robust RTK positioning performance. However, it is worth noting that when the positioning accuracy reaches a high level, such as the positioning results achieved using low-cost receivers, the robustness performance shows a relatively decreasing trend. This finding suggests that under the condition of high positioning accuracy, the sensitivity of specific positioning equipment to interference sources may increase, resulting in a decline in the effect of robust RTK positioning.
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  • 文章类型: Journal Article
    细胞骨骼和微管萎缩是阿尔茨海默病(AD)的主要标志。研究可以相互作用/稳定细胞骨架(在病理线索下)的内源性蛋白质的方法很少见。这里,我们描述了受体酪氨酸激酶样孤儿受体1(ROR1),受体酪氨酸激酶(RTK),可以通过促进神经突生长来充当神经保护分子,稳定细胞骨架成分,并改变AD细胞培养模型中肌动蛋白组装的动力学。
    Cytoskeletal and microtubule atrophy are major hallmarks of Alzheimer\'s disease (AD). A method to investigate endogenous proteins that can interact/stabilize the cytoskeleton (under pathological cues) is rare. Here, we describe how receptor tyrosine kinase-like orphan receptor 1 (ROR1), a receptor tyrosine kinase (RTK), can act as a neuroprotective molecule by promoting neurite outgrowth, stabilizing cytoskeletal components, and altering the dynamics of actin assembly in a cell culture model of AD.
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  • 文章类型: Journal Article
    眼睛的发育和生长取决于正常的晶状体形态发生及其生长。这种增长,反过来,依赖于晶状体上皮细胞的协调增殖及其随后分化成成纤维细胞。这些细胞过程受到严格的调节,以保持晶状体的精确细胞结构和大小,对其透明度和折射性能至关重要。据报道,由ERK1/2驱动的生长因子介导的MAPK信号传导对于调节晶状体的细胞过程至关重要,ERK1/2信号受到内源性拮抗剂的严格调节,包括Sprouty和相关的Spred家族的成员。我们先前的研究已经证明了这两种抑制分子在晶状体和眼睛发育中的重要性。在这项研究中,我们在这些发现的基础上强调了Spreds通过调节ERK1/2介导的晶状体上皮细胞增殖和纤维分化来调节早期晶状体形态发生的重要性。早期晶状体形态发生中Spred1和Spred2的条件丢失导致ERK1/2磷酸化升高,晶状体上皮过度增生,以及纤维分化率的相关增加。这导致了短暂的microphakia和小眼症,它消失了,由于潜在的补偿性发芽表达。我们的数据支持Spreds在晶状体形态发生的早期阶段的重要时间作用,并强调ERK1/2信号的负调节对于维持晶状体增殖和纤维分化至关重要。
    The development and growth of the eye depends on normal lens morphogenesis and its growth. This growth, in turn, is dependent on coordinated proliferation of the lens epithelial cells and their subsequent differentiation into fiber cells. These cellular processes are tightly regulated to maintain the precise cellular structure and size of the lens, critical for its transparency and refractive properties. Growth factor-mediated MAPK signaling driven by ERK1/2 has been reported as essential for regulating cellular processes of the lens, with ERK1/2 signaling tightly regulated by endogenous antagonists, including members of the Sprouty and related Spred families. Our previous studies have demonstrated the importance of both these inhibitory molecules in lens and eye development. In this study, we build on these findings to highlight the importance of Spreds in regulating early lens morphogenesis by modulating ERK1/2-mediated lens epithelial cell proliferation and fiber differentiation. Conditional loss of both Spred1 and Spred2 in early lens morphogenesis results in elevated ERK1/2 phosphorylation, hyperproliferation of lens epithelia, and an associated increase in the rate of fiber differentiation. This results in transient microphakia and microphthalmia, which disappears, owing potentially to compensatory Sprouty expression. Our data support an important temporal role for Spreds in the early stages of lens morphogenesis and highlight how negative regulation of ERK1/2 signaling is critical for maintaining lens proliferation and fiber differentiation in situ throughout life.
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  • 文章类型: Journal Article
    异源三聚体G蛋白(Gαβγ)是分子开关,可将信号从位于细胞表面的7跨膜受体传递到细胞质。这些受体的功能与异源三聚体G蛋白密切相关,因此被称为G蛋白偶联受体(GPCRs)。展示了真核生物中跨膜信号传导的这种典型的受体-换能器轴的相互依存性质。通常认为,异源三聚体G蛋白信号的激活仅通过GPCRs的作用而发生,但是,G蛋白可以在细胞中传播信号的替代机制的发现对这一观点提出了挑战。本文将重点介绍G蛋白信号传导的一般原理,该原理无需GPCRs的直接参与。此处综述的G蛋白信号传导机制是由一类G蛋白调节因子介导的,该调节因子通过包含进化上保守的序列Gα-结合和激活(GBA)基序定义。以具有GBA基序的最佳特征蛋白为例,GIV/Girdin和DAPLE,这篇综述将涵盖(i)未通过GPCRs传递的细胞外信号促进含GBA基序的调节剂与G蛋白偶联的机制,(ii)GBA基序如何与Gα亚基相互作用以促进信号传导的结构和分子基础,(iii)该机制在不同细胞和病理过程中的相关性,包括癌症和先天缺陷,和(iv)用于实验治疗目的的操纵GBA-G蛋白偶联的策略,包括开发合理工程的蛋白质和化学探针。
    Heterotrimeric G proteins (Gαβγ) are molecular switches that relay signals from 7-transmembrane receptors located at the cell surface to the cytoplasm. The function of these receptors is so intimately linked to heterotrimeric G proteins that they are named G protein-coupled receptors (GPCRs), showcasing the interdependent nature of this archetypical receptor-transducer axis of transmembrane signaling in eukaryotes. It is generally assumed that activation of heterotrimeric G protein signaling occurs exclusively by the action of GPCRs, but this idea has been challenged by the discovery of alternative mechanisms by which G proteins can propagate signals in the cell. This review will focus on a general principle of G protein signaling that operates without the direct involvement of GPCRs. The mechanism of G protein signaling reviewed here is mediated by a class of G protein regulators defined by containing an evolutionarily conserved sequence named the Gα-binding-and-activating (GBA) motif. Using the best characterized proteins with a GBA motif as examples, Gα-interacting vesicle-associated protein (GIV)/Girdin and dishevelled-associating protein with a high frequency of leucine residues (DAPLE), this review will cover (i) the mechanisms by which extracellular cues not relayed by GPCRs promote the coupling of GBA motif-containing regulators with G proteins, (ii) the structural and molecular basis for how GBA motifs interact with Gα subunits to facilitate signaling, (iii) the relevance of this mechanism in different cellular and pathological processes, including cancer and birth defects, and (iv) strategies to manipulate GBA-G protein coupling for experimental therapeutics purposes, including the development of rationally engineered proteins and chemical probes.
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  • 文章类型: Journal Article
    背景:产生促红细胞生成素的肝细胞(EPH)受体是人类中最大的已知受体酪氨酸激酶家族。这些蛋白质参与组织组织,突触可塑性,血管发育和包括癌症在内的各种疾病的进展。产生促红细胞生成素的肝细胞受体酪氨酸激酶成员EphB6是一种假激酶,与具有酶活性的对应物相比,它没有引起等量的兴趣。这项研究的目的是评估EphB6在垂体瘤中的表达。
    结果:使用实时PCR检测人正常垂体和垂体肿瘤的EphB6mRNA表达,并通过免疫组织化学和Western印迹检测EphB6蛋白。与正常垂体和分泌GH的PitNETs相比,EphB6在无功能的垂体神经内分泌肿瘤(NF-PitNETs)中高表达。EphB6mRNA表达与肿瘤大小相关。
    结论:我们的结果表明EphB6在NF-PitNETs中异常表达。未来的研究有必要确定EphB6在NF-PitNETs肿瘤发生中的作用和意义。
    BACKGROUND: Erythropoietin-producing hepatocellular (EPH) receptors are the largest known family of receptor tyrosine kinases characterized in humans. These proteins are involved in tissue organization, synaptic plasticity, vascular development and the progression of various diseases including cancer. The Erythropoietin-producing hepatocellular receptor tyrosine kinase member EphB6 is a pseudokinase which has not attracted an equivalent amount of interest as its enzymatically-active counterparts. The aim of this study was to assess the expression of EphB6 in pituitary tumors.
    RESULTS: Human normal pituitaries and pituitary tumors were examined for EphB6 mRNA expression using real-time PCR and for EphB6 protein by immunohistochemistry and Western blotting. EphB6 was highly expressed in non-functioning pituitary neuroendocrine tumors (NF-PitNETs) versus the normal pituitary and GH-secreting PitNETs. EphB6 mRNA expression was correlated with tumor size.
    CONCLUSIONS: Our results suggest EphB6 aberrant expression in NF-PitNETs. Future studies are warranted to determine the role and significance of EphB6 in NF-PitNETs tumorigenesis.
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  • 文章类型: Journal Article
    我们使用两种不同的身份验证方案,比较了芬兰南部开放天空和城市场景中双频带(GPSL1/L2和GalileoE1/E5a)实时运动学(RTK)定位的性能:一种仅使用经过Galileo认证的卫星开放服务导航消息认证(OSNMA)服务(在我们的测试时,仅使用经过认证的Galileo卫星),而另一种则无需认证。结果显示了准确性和可用性与可用性之间的实际权衡与仅使用OSNMA认证卫星相关的真实性,而只有伽利略卫星的认证是可能的(例如,在我们开放的天空中,RTK定位可用性从96.67下降到86.01%,在我们的城市场景中从73.55下降到18.65%,分别),以及在支持GPS卫星认证的情况下,在类似实验条件下可以达到的潜在性能的上限(例如,在我们开放的天空和城市场景中,整体14厘米和10.20米95%的水平精度,在空旷的情况下,在97.39、96.03和92.43%的时间内低于30、20和10厘米,在城市场景中分别为49.12、45.96和39.63%,分别)。
    We compare the performance of dual-band (GPS L1/L2 and Galileo E1/E5a) real-time kinematic (RTK) positioning in an open sky and urban scenarios in southern Finland using two different authentication schemes: one using only satellites authenticated by Galileo\'s open service navigation message authentication (OSNMA) service (which at the moment of our tests led to using only authenticated Galileo satellites) and the other with no authentication. The results show the actual trade-off between accuracy and availability vs. authenticity associated with using only OSNMA-authenticated satellites, while the authentication of only Galileo satellites is possible (e.g., a drop of RTK positioning availability from 96.67 to 86.01% in our open sky and from 73.55 to 18.65% in our urban scenarios, respectively), and an upper bound of the potential performance that could be reached in similar experimental conditions had the authentication of GPS satellites been supported (e.g., an overall 14 cm and 10.20 m 95% horizontal accuracy in our open sky and urban scenarios, with below 30, 20 and 10 cm during 97.39, 96.03 and 92.43% of the time in the open sky and 49.12, 45.96 and 39.63% in the urban scenarios, respectively).
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