Polyketide

聚酮化合物
  • 文章类型: Journal Article
    Angucycline和angucyclones代表一类属于芳香族聚酮的天然化合物。它们表现出广泛的生物学特性,如抗菌剂,抗病毒,和细胞毒性。它们巨大的治疗潜力和多样化的支架吸引了许多合成化学家设计新策略来构建其复杂的分子结构。300多名班级成员已经从自然来源中分离出来,主要来自链霉菌属的细菌菌株。这篇综述强调了他们合成的最新进展,如氧化环化,光氧化,和金属催化的[4+2]-环加成,这促进了各种angucycles天然产物的有效和实用的总合成。
    Angucyclines and angucyclinones represent a class of natural compounds that belong to the group of aromatic polyketides. They exhibit a wide array of biological properties, such as antimicrobial, antiviral, and cytotoxic. Their considerable therapeutic potential and diverse scaffolds have attracted many synthetic chemists to devise novel strategies to construct their intricate molecular architecture. Over 300 class members have been isolated from natural sources, mainly from bacterial strains of Streptomyces species. This review highlights recent advancements in their synthesis, such as oxidative cyclization, photooxidation, and metal-catalyzed [4+2]-cycloaddition, which has facilitated the efficient and practical total syntheses of various angucyclines natural products.
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  • 文章类型: Journal Article
    背景:耐药性是对抗甲型流感病毒(IAV)的重要因素。天然产物为发现新型抗病毒药物提供了丰富的先导化合物来源。在之前的研究中,我们从木霉属真菌的菌丝体中分离出山梨醇类聚酮HSL-2。T-4-1.这里,我们表明该化合物对一组IAV具有很强的抗病毒活性。
    方法:采用免疫荧光和qRT-PCR检测HSL-2对流感病毒复制的抑制作用和IAV诱导的促炎细胞因子如TNF-α的表达。IL-6和IL-1β。
    结果:结果表明HSL-2抑制流感病毒的复制,显著抑制IAV诱导的促炎细胞因子TNF-α的过表达,IL-6和IL-1β通过调节PPAR-γ/NF-κB途径。值得注意的是,当用PPAR-γsiRNA转染细胞或用PPAR-γ抑制剂T0070907处理细胞时,这种效应降低。此外,在IAV感染的小鼠模型中,HSL-2能够减弱肺部炎症反应并改善肺部病变。
    结论:在本文中,我们发现了一种微生物次生代谢产物,HSL-2,具有抗流感病毒活性。该报告首次描述了HSL-2的抗病毒活性和作用机制,为从天然来源开发新型抗流感病毒药物提供了新的策略。
    BACKGROUND: Drug resistance is an important factor in the fight against influenza A virus (IAV). Natural products offer a rich source of lead compounds for the discovery of novel antiviral drugs. In a previous study, we isolated the sorbicillinoid polyketide HSL-2 from the mycelium of fungus Trichoderma sp. T-4-1. Here, we show that this compound exerts strong antiviral activity against a panel of IAVs.
    METHODS: The immunofluorescence and qRT-PCR assays were used to detect the inhibitory effect of HSL-2 toward the replication of influenza virus and IAV-induced expression of the pro-inflammatory cytokines such as TNF-α, IL-6, and IL-1β.
    RESULTS: The results indicated that HSL-2 inhibited influenza virus replication, and it significantly inhibited IAV-induced overexpression of the pro-inflammatory cytokines TNF-α, IL-6, and IL-1β through modulating the PPAR-γ/NF-κB pathway. Notably, this effect was decreased when cells were transfected with PPAR-γ siRNA or treated with the PPAR-γ inhibitor T0070907. In addition, HSL-2 was able to attenuate lung inflammatory responses and to improve lung lesions in a mouse model of IAV infection.
    CONCLUSIONS: In this paper, we identified a microbial secondary metabolite, HSL-2, with anti-influenza virus activity. This report is the first to describe the antiviral activity and mechanism of action of HSL-2, and it provides a new strategy for the development of novel anti-influenza virus drugs from natural sources.
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  • 文章类型: Journal Article
    两种新的聚酮衍生物,吡喃酮A和B(1和2),和两种天然稀有的氨基-双-四氢呋喃衍生物,吡草胺A和B(3和4),与9种已知的化合物(5-13)一起从海洋来源的真菌红斑青霉BTBU20213035中分离。通过HRESIMS和1D和2DNMR分析鉴定了结构,通过比较实验和计算的电子圆二色性(ECD)光谱和13CNMR数据来确定它们的绝对构型。我们发现6对金黄色葡萄球菌具有抗菌活性,MIC值为3.125μg/mL,和1和2在12.5和50μg/mL与0.0625μg/mL雷帕霉素下显示出对白色念珠菌的协同抗真菌活性。
    Two new polyketide derivatives, penirubenones A and B (1 and 2), and two naturally rare amino-bis-tetrahydrofuran derivatives, penirubenamides A and B (3 and 4), together with nine known compounds (5-13) were isolated from the marine-derived fungus Penicillium rubens BTBU20213035. The structures were identified by HRESIMS and 1D and 2D NMR analyses, and their absolute configurations were determined by a comparison of experimental and calculated electronic circular dichroism (ECD) spectroscopy and 13C NMR data. We found that 6 exhibited antibacterial activity against Staphylococcus aureus, with an MIC value of 3.125 μg/mL, and 1 and 2 showed synergistic antifungal activity against Candida albicans at 12.5 and 50 μg/mL with 0.0625 μg/mL rapamycin.
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  • 文章类型: Journal Article
    红树林内生真菌Talaromycessp的次生代谢产物的研究。SAF14导致了两种新的聚酮化合物的分离,(R)-3-(6,8-二羟基-7-甲氧基-1-氧代异色满-3-基)丙酸甲酯(1),(R)-3-(5,8-二羟基-1-氧代异色满-3-基)丙酸(2),连同四种已知的生物碱(3-6)。通过对HR-ESI-MS和NMR数据的综合分析,阐明了新化合物的平面结构。通过将计算的ECD谱与测量的ECD谱进行比较来确定绝对构型。测试了所有分离的化合物对三种人癌细胞系的细胞毒性活性。已知的Beauvericin(3)对A549,MCF-7和KB细胞系表现出强的细胞毒性活性,IC50值为5.36±2.49,1.96±1.09和4.46±0.68μM,分别。
    Investigation of secondary metabolites from the mangrove endophytic fungus Talaromyces sp. SAF14 led to the isolation of two new polyketides, methyl (R)-3-(6,8-dihydroxy-7-methoxy-1-oxoisochroman-3-yl)propanoate (1), (R)-3-(5,8- dihydroxy-1-oxoisochroman-3-yl)propanoic acid (2), together with four known alkaloids (3-6). The planar structures of new compounds were elucidated by comprehensive analysis of HR-ESI-MS and NMR data. The absolute configurations were determined by comparison of the calculated ECD spectrum with the measured one. All the isolated compounds were tested for cytotoxic activities against three human cancer cell lines. The known beauvericin (3) exhibited strong cytotoxic activity against A549, MCF-7, and KB cell lines with IC50 values of 5.36 ± 2.49, 1.96 ± 1.09 and 4.46 ± 0.68 μM, respectively.
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  • 文章类型: Journal Article
    Hitachimycin是一种双环大内酰胺抗生素,在聚酮骨架的起始位置具有(S)-β-苯丙氨酸(β-Phe)。而识别β-氨基酸的酶,修饰氨基酰基,并将所得的二肽基团转移到聚酮合酶(PKS)的酰基载体蛋白结构域已被广泛研究,PKS后修饰机制负责构建他他霉素独特的双环结构仍然难以捉摸。在这项研究中,我们首先灭活了六个编码推定的PKS后修饰酶的基因,即hitM1到hitM6,在赤链霉菌中确定它们参与hitachimycin生物合成。ΔhitM4菌株积累了全反式-2,4,6,8,18-戊烯大内酰胺,通过细胞喂养实验证实了它是一种真正的hitachimycin生物合成中间体,并且似乎是PKS后修饰途径的初始中间体。ΔhitM1菌株积累了10-O-去甲基-10-氧代希奇霉素(M1-A)。在酶实验中,M1-A在NADPH存在下被NAD(P)H依赖性还原酶HitM1还原。由HitM1催化的反应产物通过甲基转移酶HitM6转化为他希霉素。因此,我们提出了一种合理的PKS后修饰机制来生物合成hitachimycin。
    Hitachimycin is a bicyclic macrolactam antibiotic with (S)-β-phenylalanine (β-Phe) at the starter position of the polyketide skeleton. While the enzymes that recognize β-amino acids, modify the aminoacyl groups, and transfer the resultant dipeptide groups to the acyl carrier protein domains of polyketide synthases (PKSs) have been studied extensively, the post-PKS modification mechanism responsible for constructing the unique bicyclic structure of hitachimycin remains elusive. In this study, we first inactivated six genes encoding putative post-PKS modification enzymes, namely hitM1 to hitM6, in Streptomyces scabrisporus to determine their involvement in hitachimycin biosynthesis. The ΔhitM4 strain accumulated an all-trans-2,4,6,8,18-pentaene macrolactam, which was confirmed as a true intermediate in hitachimycin biosynthesis by cellular feeding experiments, and appears to be the initial intermediate in the post-PKS modification pathway. The ΔhitM1 strain accumulated 10-O-demethyl-10-oxohitachimycin (M1-A). In enzymatic experiments, M1-A was reduced by the NAD(P)H-dependent reductase HitM1 in the presence of NADPH. The product of the reaction catalyzed by HitM1 was converted to hitachimycin by the methyltransferase HitM6. We thus propose a plausible post-PKS modification mechanism for the biosynthesis of hitachimycin.
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  • 文章类型: Journal Article
    宫颈霉素A-D是由肌腱链霉菌HKI0179产生的双糖基化聚酮类抗生素,具有对革兰氏阳性细菌的杀菌活性。在这项研究中,宫颈霉素C(CmC)处理在枯草芽孢杆菌168中引起意大利面样表型,具有细长的弯曲细胞,细胞分裂后保持连接,表现出染色体分离缺陷,导致没有DNA的鬼细胞。CmC处理的金黄色葡萄球菌的电子显微镜(3×MIC)显示肿胀的细胞,畸形的隔垫,细胞壁增厚,和粗糙的细胞壁表面。在枯草芽孢杆菌中的掺入试验表明在高的宫颈霉素浓度下对DNA生物合成有影响。的确,DNA促旋酶亚基B基因(gyrB)的人工下调增加了琼脂扩散试验中的宫颈霉素活性,and,在高浓度下(从62.5×MIC开始),该抗生素在体外抑制金黄色葡萄球菌DNA促旋酶超螺旋活性。为了更全面地了解CmC的作用方式,进行了宫颈霉素处理的与未处理的金黄色葡萄球菌细胞的转录组学和蛋白质组学。有趣的是,3×MIC的宫颈霉素没有引起特征性反应,这表明体内DNA促旋酶活性受到干扰。相反,宫颈霉素诱导CtsR/HrcA热休克操纵子的表达和自溶素的表达,与核糖体靶向抗生素庆大霉素相似。总之,我们确定了DNA促旋酶为靶标,但是在低浓度下,电子显微镜和组学数据揭示了宫颈霉素的更复杂的作用模式,包括热休克反应的感应,表明细胞中的蛋白质应激。重要抗生素革兰氏阳性菌的耐药性是现代医学中的一个新兴问题,迫切需要具有新型作用方式的新型抗生素。来自链霉菌的次生代谢产物是抗生素的重要来源,如腱链霉菌HKI0179产生的子宫颈霉素复合物。枯草芽孢杆菌和金黄色葡萄球菌对宫颈霉素C的表型反应表明染色体分离和隔膜形成缺陷。这种作用首先归因于宫颈霉素C和DNA促旋酶之间的相互作用。然而,cervimin处理与未处理的金黄色葡萄球菌细胞的组学数据表明了不同的作用模式,因为应激反应不包括SOS反应,但类似于对诱导误译或过早链终止并引起蛋白质应激的抗生素的反应。总之,这些结果指出了一种可能的新机制,该机制在细胞中产生蛋白质应激,并随后导致细胞和染色体分离的缺陷。
    Cervimycins A-D are bis-glycosylated polyketide antibiotics produced by Streptomyces tendae HKI 0179 with bactericidal activity against Gram-positive bacteria. In this study, cervimycin C (CmC) treatment caused a spaghetti-like phenotype in Bacillus subtilis 168, with elongated curved cells, which stayed joined after cell division, and exhibited a chromosome segregation defect, resulting in ghost cells without DNA. Electron microscopy of CmC-treated Staphylococcus aureus (3 × MIC) revealed swollen cells, misshapen septa, cell wall thickening, and a rough cell wall surface. Incorporation tests in B. subtilis indicated an effect on DNA biosynthesis at high cervimycin concentrations. Indeed, artificial downregulation of the DNA gyrase subunit B gene (gyrB) increased the activity of cervimycin in agar diffusion tests, and, in high concentrations (starting at 62.5 × MIC), the antibiotic inhibited S. aureus DNA gyrase supercoiling activity in vitro. To obtain a more global view on the mode of action of CmC, transcriptomics and proteomics of cervimycin treated versus untreated S. aureus cells were performed. Interestingly, 3 × MIC of cervimycin did not induce characteristic responses, which would indicate disturbance of the DNA gyrase activity in vivo. Instead, cervimycin induced the expression of the CtsR/HrcA heat shock operon and the expression of autolysins, exhibiting similarity to the ribosome-targeting antibiotic gentamicin. In summary, we identified the DNA gyrase as a target, but at low concentrations, electron microscopy and omics data revealed a more complex mode of action of cervimycin, which comprised induction of the heat shock response, indicating protein stress in the cell.IMPORTANCEAntibiotic resistance of Gram-positive bacteria is an emerging problem in modern medicine, and new antibiotics with novel modes of action are urgently needed. Secondary metabolites from Streptomyces species are an important source of antibiotics, like the cervimycin complex produced by Streptomyces tendae HKI 0179. The phenotypic response of Bacillus subtilis and Staphylococcus aureus toward cervimycin C indicated a chromosome segregation and septum formation defect. This effect was at first attributed to an interaction between cervimycin C and the DNA gyrase. However, omics data of cervimycin treated versus untreated S. aureus cells indicated a different mode of action, because the stress response did not include the SOS response but resembled the response toward antibiotics that induce mistranslation or premature chain termination and cause protein stress. In summary, these results point toward a possibly novel mechanism that generates protein stress in the cells and subsequently leads to defects in cell and chromosome segregation.
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  • 文章类型: Journal Article
    微生物衍生的天然产物仍然是结构多样的生物活性化合物和化学支架的主要来源,具有作为靶向耐药病原体和癌症的新疗法的潜力。特别是,基因组挖掘揭示了链霉菌属中大量隐匿或低产量的生物合成基因簇。然而,低天然产物产量-由于缺乏高通量方法而阻碍了其改进-减缓了许多潜在疗法的发现和开发。这里,我们描述了我们通过转基因的蓝藻链霉菌136来提高作为癌症治疗药物正在研究中的landomycins-angucycline家族聚酮化合物的产量的努力。在简化了蓝藻培养物的提取过程后,我们确定了主要的陆霉素产品在培养提取物中被吸收的波长,我们用它来系统地探索培养基成分,以提高总地霉素滴度。通过相关分析,我们通过确定培养上清液吸收的替代波长来简化培养优化过程,但该波长仍代表总的landomycin滴度。使用随后改进的样品吞吐量,我们在培养过程中探索了陆霉素的产生,以进一步提高陆霉素的产量并减少培养时间。测试分离的Landomycins的抗菌活性,我们报道了对革兰氏阳性细菌的广泛抑制,Landomycinone对真菌的抑制作用,以及革兰氏阴性细菌对陆霉素的广泛抗性,这可能是由细菌膜对陆霉素的排斥介导的。最后,分离的landomycin对A549肺癌细胞的抗癌活性与先前关于聚糖链长度与活性相关的其他细胞系的报道一致。鉴于链霉菌产生的天然产物的普遍性,以及生物活性天然产物及其代谢前体常见的光吸收部分,我们的方法与提高其他感兴趣的天然产物的产率有关。
    Microbial-derived natural products remain a major source of structurally diverse bioactive compounds and chemical scaffolds that have the potential as new therapeutics to target drug-resistant pathogens and cancers. In particular, genome mining has revealed the vast number of cryptic or low-yield biosynthetic gene clusters in the genus Streptomyces. However, low natural product yields-improvements to which have been hindered by the lack of high throughput methods-have slowed the discovery and development of many potential therapeutics. Here, we describe our efforts to improve yields of landomycins-angucycline family polyketides under investigation as cancer therapeutics-by a genetically modified Streptomyces cyanogenus 136. After simplifying the extraction process from S. cyanogenus cultures, we identified a wavelength at which the major landomycin products are absorbed in culture extracts, which we used to systematically explore culture medium compositions to improve total landomycin titers. Through correlational analysis, we simplified the culture optimization process by identifying an alternative wavelength at which culture supernatants absorb yet is representative of total landomycin titers. Using the subsequently improved sample throughput, we explored landomycin production during the culturing process to further increase landomycin yield and reduce culture time. Testing the antimicrobial activity of the isolated landomycins, we report broad inhibition of Gram-positive bacteria, inhibition of fungi by landomycinone, and broad landomycin resistance by Gram-negative bacteria that is likely mediated by the exclusion of landomycins by the bacterial membrane. Finally, the anticancer activity of the isolated landomycins against A549 lung carcinoma cells agrees with previous reports on other cell lines that glycan chain length correlates with activity. Given the prevalence of natural products produced by Streptomyces, as well as the light-absorbing moieties common to bioactive natural products and their metabolic precursors, our method is relevant to improving the yields of other natural products of interest.
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  • 文章类型: Journal Article
    在微生物的生命活动中,产生多种次生代谢产物,包括抗菌药物和抗肿瘤药物,在临床实践中被广泛使用。除了探索新的抗生素,这使得放线菌的研究重点之一是通过多种手段有效提高生产菌株中抗生素的产量。大多数产生抗生素的菌株具有调节其生长的多种功能调节因子,发展,和次级代谢产物的生物合成过程。通过对抗生素生物合成中的前体物质的研究,研究人员揭示了前体生物合成过程和前体合成调节剂影响次生代谢产物生物合成的机制,可用于获得具有高抗生素产量的工程菌株。本文综述了抗生素生物合成前体的供应以及调节剂在生物合成过程中的作用的研究进展。这为建立有效的育种方法,通过操纵前体合成基因和相关调节因子来提高抗生素产量奠定了基础。
    During the life activities of microorganisms, a variety of secondary metabolites are produced, including antimicrobials and antitumor drugs, which are widely used in clinical practice. In addition to exploring new antibiotics, this makes it one of the research priorities of Actinomycetes to effectively increase the yield of antibiotics in production strains by various means. Most antibiotic-producing strains have a variety of functional regulatory factors that regulate their growth, development, and secondary metabolite biosynthesis processes. Through the study of precursor substances in antibiotic biosynthesis, researchers have revealed the precursor biosynthesis process and the mechanism by which precursor synthesis regulators affect the biosynthesis of secondary metabolites, which can be used to obtain engineered strains with high antibiotic production. This paper summarizes the supply of antibiotic biosynthesis precursors and the progress of research on the role of regulators in the process of precursors in biosynthesis. This lays the foundation for the establishment of effective breeding methods to improve antibiotic yields through the manipulation of precursor synthesis genes and related regulators.
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  • 文章类型: Journal Article
    芳香聚酮化合物以其广泛的药物活性而闻名。它们的结构多样性主要是通过修改有限类型的基本框架来产生的。在这项研究中,我们表征了独特的基本芳香骨架的生物合成,苯基二甲基蒽酮(PDA)在()/(-)-蒽并苯并恶辛酮(ABX)和法霉素(FAS)中发现。它的生物合成采用甲基转移酶(Abx(+)M/Abx(-)M/FasT)和不寻常的TcmI样芳香化酶/环化酶(ARO/CYC,Abx()D/Abx(-)D/FasL)以及催化聚酮链芳构化/环化的非必需辅助剂ARO/CYC(Abx()C/Abx(-)C/FasD),导致PDA框架的所有四个芳环的形成,包括C9至C14环和罕见的角苯环。Abx(+)D的生化和结构分析揭示了一个独特的环区,与其他常规TcmI型ARO/CYCs相比,产生了其独特的酰基载体蛋白依赖性特异性,所有这些都强加给自由分子。诱变分析揭示了Abx()D的催化活性的关键残基,并表明其内部口袋的大小和形状决定了芳构化/环化的方向。本研究揭示了四环和非TcmN型C9至C14ARO/CYC,显著拓展了我们对ARO/CYCs和芳香族聚酮化合物框架生物合成的认知。
    Aromatic polyketides are renowned for their wide-ranging pharmaceutical activities. Their structural diversity is mainly produced via modification of limited types of basic frameworks. In this study, we characterized the biosynthesis of a unique basic aromatic framework, phenyldimethylanthrone (PDA) found in (+)/(-)-anthrabenzoxocinones (ABXs) and fasamycin (FAS). Its biosynthesis employs a methyltransferase (Abx(+)M/Abx(-)M/FasT) and an unusual TcmI-like aromatase/cyclase (ARO/CYC, Abx(+)D/Abx(-)D/FasL) as well as a nonessential helper ARO/CYC (Abx(+)C/Abx(-)C/FasD) to catalyze the aromatization/cyclization of polyketide chain, leading to the formation of all four aromatic rings of the PDA framework, including the C9 to C14 ring and a rare angular benzene ring. Biochemical and structural analysis of Abx(+)D reveals a unique loop region, giving rise to its distinct acyl carrier protein-dependent specificity compared to other conventional TcmI-type ARO/CYCs, all of which impose on free molecules. Mutagenic analysis discloses critical residues of Abx(+)D for its catalytic activity and indicates that the size and shape of its interior pocket determine the orientation of aromatization/cyclization. This study unveils the tetracyclic and non-TcmN type C9 to C14 ARO/CYC, significantly expanding our cognition of ARO/CYCs and the biosynthesis of aromatic polyketide framework.
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  • 文章类型: Journal Article
    Chronic airway inflammatory diseases like asthma, chronic obstructive pulmonary disease (COPD), and their associated exacerbations cause significant socioeconomic burden. There are still major obstacles to effective therapy for controlling severe asthma and COPD progression. Advances in understanding the pathogenesis of the two diseases at the cellular and molecular levels are essential for the development of novel therapies. In recent years, significant efforts have been made to identify natural products as potential drug leads for treatment of human diseases and to investigate their efficacy, safety, and underlying mechanisms of action. Many major active components from various natural products have been extracted, isolated, and evaluated for their pharmacological efficacy and safety. For the treatment of asthma and COPD, many promising natural products have been discovered and extensively investigated. In this chapter, we will review a range of natural compounds from different chemical classes, including terpenes, polyphenols, alkaloids, fatty acids, polyketides, and vitamin E, that have been demonstrated effective against asthma and/or COPD and their exacerbations in preclinical models and clinical trials. We will also elaborate in detail their underlying mechanisms of action unraveled by these studies and discuss new opportunities and potential challenges for these natural products in managing asthma and COPD.
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