Hu sheep

湖羊
  • 文章类型: Journal Article
    胍基乙酸(GAA)通过刺激肌酸的生物合成,可以有效地改善能量和蛋白质的代谢。我们提出了一项研究,探讨了GAA对生产性能的影响,血清生物化学,湖羊的肉品质和瘤胃发酵。将144只断奶雄性湖羊(体重16.91±3.1kg)随机分为4组,每组3只,每组12只。饮食中添加了0(CON),500(GAA-1),750(GAA-2)和1000mg/kg(GAA-3)的GAA(饲料重量),分别。经过90天的全面实验,我们发现补充GAA对各种肌肉参数有显著影响。具体来说,显着提高了动物的平均日生长(ADG),并改善了肌肉的剪切力和纤维直径,同时还减少了滴水损失和肌肉纤维密度。此外,在饲料中添加GAA显着升高了高密度脂蛋白胆固醇(HDL-C)的血清浓度,总蛋白(TP)和球蛋白(GLB),以及超氧化物歧化酶(SOD)和谷胱甘肽过氧化物酶(GSH-Px)的酶活性。同时,血清中甘油三酯(TG)和丙二醛(MDA)水平降低。此外,GAA降低了pH值和乙酸盐与丙酸盐的比率,并增加了瘤胃液的总挥发性脂肪酸(TVFA)和氨态氮(NH3-N)水平。此外,GAA上调湖羊肌肉中乙酰辅酶A羧化酶(ACC)基因的表达。总之,我们的研究结果表明,补充GAA不仅可以提高肌肉质量,而且可以积极影响血清生化和瘤胃代谢,使其成为改善湖羊整体健康和性能的潜在候选人。
    Guanidinoacetic acid (GAA) can effectively improve the metabolism of energy and proteins by stimulating creatine biosynthesis. We present a study exploring the impact of GAA on production performance, serum biochemistry, meat quality and rumen fermentation in Hu sheep. A total of 144 weaned male Hu sheep (body weight 16.91 ± 3.1 kg) were randomly assigned to four groups with three replicates of twelve sheep in each group. The diets were supplemented with 0 (CON), 500 (GAA-1), 750 (GAA-2) and 1000 mg/kg (GAA-3) of GAA (weight of feed), respectively. After a comprehensive 90-day experimental period, we discovered that the supplementation of GAA had a remarkable impact on various muscle parameters. Specifically, it significantly enhanced the average daily growth (ADG) of the animals and improved the shear force and fiber diameter of the muscle, while also reducing the drip loss and muscle fiber density. Furthermore, the addition of GAA to the feed notably elevated the serum concentrations of high-density lipoprotein cholesterol (HDL-C), total protein (TP) and globulin (GLB), as well as the enzyme activity of superoxide dismutase (SOD) and glutathione peroxidase (GSH-Px). Concurrently, there was a decrease in the levels of triglycerides (TG) and malondialdehyde (MDA) in the serum. In addition, GAA decreased the pH and the acetate-to-propionate ratio and increased the total volatile fatty acids (TVFA) and ammoniacal nitrogen (NH3-N) levels of rumen fluid. Additionally, GAA upregulated acetyl-CoA carboxylase (ACC) gene expression in the Hu sheep\'s muscles. In conclusion, our findings suggest that GAA supplementation not only enhances muscle quality but also positively affects serum biochemistry and ruminal metabolism, making it a potential candidate for improving the overall health and performance of Hu sheep.
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  • 文章类型: Journal Article
    增加绵羊的乳头数量有助于提高绵羊出生后的成活率。为了分析湖羊多个乳头形成的相关候选基因,本研究旨在研究湖羊多个乳头的遗传模式。在这项研究中,基于157只湖羊的全基因组数据,Fst,xp-EHH,进行Pi和iHS信号传导,并基于绵羊的Oar_v4.0注释了每个分析结果的前5%信号区域。结果表明,共筛选出142个SNP位点。我们发现PTPRG,TMEM117和LRP1B基因与湖羊息肉形成密切相关,此外,在与息肉相关的候选基因中,我们发现了与牛奶性状相关的基因,例如TMEM117,SLC25A21和NCKAP5。本研究在基因组水平上筛选出了湖羊多个乳头形成的候选基因。
    Increasing the number of teats in sheep helps to improve the survival rate of sheep lambs after birth. In order to analyze the candidate genes related to the formation of multiple teats in Hu sheep, the present study was conducted to investigate the genetic pattern of multiple teats in Hu sheep. In this study, based on genome-wide data from 157 Hu sheep, Fst, xp-EHH, Pi and iHS signaling were performed, and the top 5% signal regions of each analyzed result were annotated based on the Oar_v4.0 for sheep. The results show that a total of 142 SNP loci were selected. We found that PTPRG, TMEM117 and LRP1B genes were closely associated with polypodium formation in Hu sheep, in addition, among the candidate genes related to polypodium we found genes such as TMEM117, SLC25A21 and NCKAP5 related to milk traits. The present study screened out candidate genes for the formation of multiple teats at the genomic level in Hu sheep.
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  • 文章类型: Journal Article
    本试验旨在研究甜菊醇苷对生长性能的潜在影响。瘤胃发酵过程,湖羊的微生物多样性。试验采用单因素设计。二十只健康断奶的胡羔羊,具有相当的平均体重18.31±1.24公斤,随机分为两组:对照组(CON)和实验组(STE),每个包括10只羔羊。CON饲喂基础饮食,并且STE补充有基于基础饮食的0.07%的甜菊醇糖苷。在实验期间,密切监测和记录体重和采食量的变化.饲喂90d后,收集血液以确定血液生化指标,收集瘤胃液样品,对瘤胃发酵参数和微生物多样性进行深入分析。结果显示,两组之间的生长性能或血清生化指标差异无统计学意义(p>0.05)。STE和CON中的瘤胃pH在正常范围内。瘤胃氨氮(NH3-N)和乙酸(AA)含量的STE较CON明显下降(p<0.05)。两组间其他挥发性脂肪酸(VFA)水平无显著差异(p>0.05)。瘤胃微生物OTUs计数,以及香农,辛普森,Chao1和Ace指数,与CON组相比,STE组明显更低(p<0.05)。此外,在门的水平,Firmicutes的相对丰度,拟杆菌,和变形杆菌共同占总门组成的97%以上。与CON组相比,STE组显示变形杆菌的相对丰度增加(p<0.05),伴随着芽孢杆菌和脱硫杆菌的相对丰度显着降低(p<0.05)。在属一级,在STE组中,Prevotella_7和丁二弧菌科_UCG_001的相对丰度显着增加,Rikenellaceae_RC9_gut_组的相对丰度显着降低(p<0.05)。根据瘤胃微生物区系与VFA的相关性分析,丁烟菌科UCG001的相对丰度与AA呈显著负相关(p<0.05),而乳酸菌与异丁酸(IBA)呈显著正相关(p<0.05)。总之,甜菊醇苷对湖羊生产性能和血液生化指标无显著影响。甜菊醇苷可以改良湖羊瘤胃发酵参数和瘤胃微生物区系构造,对瘤胃微生物多样性和构成有必定影响。
    The experiment was conducted to investigate the potential effects of steviol glycosides on growth performance, rumen fermentation processes, and microbial diversity in Hu sheep. A single-factor design was used for the trial. Twenty healthy weaned Hu lambs, possessing comparable body weights averaging 18.31 ± 1.24 kg, were randomly allocated into two distinct groups: the control group (CON) and the experimental group (STE), with each comprising 10 lambs. The CON was fed the basal diet, and the STE was supplemented with 0.07% steviol glycosides based on the basal diet. During the experimental period, variations in body weight and feed intake were closely monitored and recorded. After feeding for 90 d, blood was collected to determine blood biochemical indices, and rumen fluid samples were gathered for an in-depth analysis of rumen fermentation parameters and microbial diversity. The outcomes revealed no statistically significant differences in growth performance or serum biochemical indices between the two groups (p > 0.05). Rumen pH in STE and CON was within the normal range. The rumen ammonia nitrogen (NH3-N) and acetic acid (AA) content of STE decreased significantly compared with CON (p < 0.05). No significant variations were observed in the levels of other volatile fatty acids (VFAs) between the two groups (p > 0.05). The rumen microbial OTUs count, as well as the Shannon, Simpson, Chao1, and Ace indices, were notably lower in the STE group compared to the CON group (p < 0.05). Additionally, at the phylum level, the relative abundance of Firmicutes, Bacteroidetes, and Proteobacteria collectively accounted for over 97% of the total phylum composition. In comparison to the CON group, the STE group exhibited an increase in the relative abundance of Proteobacteria (p < 0.05), accompanied by a significant reduction in the relative abundance of Patescibacteria and Desulfobacteria (p < 0.05). At the genus level, there was a notable increase in the relative abundance of Prevotella_7 and Succinivibrionaceae_UCG_001 in the STE group, whereas the relative abundance of Rikenellaceae_RC9_gut_group significantly decreased (p < 0.05). According to the correlation analysis between rumen microflora and VFAs, the relative abundance of Succinivibrionaceae_UCG_001 displayed a significant negative correlation with AA (p < 0.05), whereas Lactobacillus exhibited a notable positive correlation with isobutyric acid (IBA) (p < 0.05). In summary, steviol glycosides had no significant effect on the production performance and blood biochemical indexes of Hu sheep. Steviol glycosides can improve rumen fermentation parameters and rumen microflora structure of Hu sheep and have a certain effect on rumen microbial diversity and composition.
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  • 文章类型: Journal Article
    农业工业副产品的利用,如水果残留物,在价格上涨和传统粗饲料供应有限的情况下,为反刍动物提供替代饲料的策略。在这项研究中,我们研究了刺梨残留物的影响,中国贵州当地的水果残留物,关于增长,血液代谢产物,瘤胃发酵,和胡羊的屠宰性能。将96只绵羊随机分为四组,即控制,处理1,处理2和处理3,以及饲喂含有0,10,20和30%刺梨残留物的日粮,分别。饲喂不同水平的刺梨残留物在干物质摄入量方面没有显着差异,平均每日收益,或干物质摄入量与平均日增重的比率。然而,饲喂30%刺梨Tratt残留物的组中的绵羊显示出最高的毛利润。与对照组相比,饲喂含有刺梨残留物的饮食组的血浆白蛋白含量较低(p<0.05)。此外,与对照组和治疗1相比,饮食治疗3降低了血浆肌酐水平(p<0.05)。治疗2和治疗3的绵羊血浆高密度脂蛋白水平高于对照组和治疗1(p<0.05),以及总胆固醇水平与对照组相比增加(p<0.05)。其他血浆代谢物没有显著差异。瘤胃pH,N-NH3,挥发性脂肪酸,甲烷水平在四组之间没有显着差异。然而,与对照和处理1相比,饲喂饮食处理2和处理3导致持水能力降低和剪切力增加(p<0.05)。此外,pH值,红色色度(a*),黄度指数(b*),在四组绵羊中,亮度(L*)不受影响。总之,包含高达30%的刺梨Tratt残留物对生长性能没有不利影响,允许在不影响瘤胃发酵参数的情况下节省饲料成本。刺梨残留物还显示出改善血浆蛋白效率和增强脂质代谢的益处,尽管对肉质的影响有限。考虑到它的承受能力,刺梨残留物是低成本饮食的实用选择,确保经济回报。
    The utilization of agro-industrial by-products, such as fruit residues, presents a promising strategy for providing alternative feed to ruminants amidst rising prices and limited availability of traditional roughage. In this study, we investigated the effects of Rosa roxburghii tratt residue, a local fruit residue in Guizhou province of China, on the growth, blood metabolites, rumen fermentation, and slaughter performance of Hu sheep. Ninety-six sheep were randomly divided into four groups, namely control, treatment 1, treatment 2, and treatment 3, and fed diets containing 0, 10, 20, and 30% Rosa roxburghii Tratt residue, respectively. Feeding varying levels of Rosa roxburghii Tratt residue showed no significant differences in dry matter intake, average daily gain, or the ratio of dry matter intake to average daily gain. However, sheep in the group fed with 30% Rosa roxburghii Tratt residue showed the highest gross profit. Plasma albumin content was lower in groups fed with Rosa roxburghii Tratt residue-containing diets compared to the control group (p < 0.05). Additionally, diet treatment 3 decreased plasma creatinine levels compared to control and treatment 1 (p < 0.05). Sheep in treatment 2 and treatment 3 exhibited higher plasma high-density lipoprotein level than control and treatment 1 (p < 0.05), as well as increased total cholesterol levels compared to control (p < 0.05). There were no significant differences in other plasma metabolites. Rumen pH, N-NH3, volatile fatty acids, and methane levels did not differ significantly among the four groups. However, feeding diets treatment 2 and treatment 3 resulted in decreased water holding capacity and increased shear force compared to control and treatment 1 (p < 0.05). Furthermore, pH, red chromaticity (a*), yellowness index (b*), and luminance (L*) were unaffected among the four groups of sheep. In conclusion, the inclusion of up to 30% Rosa roxburghii Tratt residue had no adverse effects on growth performance, allowing for feed cost savings without impacting rumen fermentation parameters. Rosa roxburghii tratt residue also showed benefits in improving plasma protein efficiency and enhancing lipid metabolism, albeit with limited effects on meat quality. Considering its affordability, Rosa roxburghii Tratt residue presents a practical choice for low-cost diets, ensuring economic returns.
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  • 文章类型: Journal Article
    这项研究调查了负能量平衡(NEB)对围产期母羊的影响,关注增长绩效的变化,血清生化参数,瘤胃发酵,瘤胃细菌组成,胎盘表型相关指标,和胎盘功能相关基因的表达水平。将妊娠130天的20只母羊随机分配到正能量平衡(PEB)或NEB组。在实验中,PEB组的母羊在饲喂前的基线期间饲喂与它们的摄入量相同的量,而NEB组的母羊被限制在其个体基线采食量的70%。实验一直进行到产后42天,每组选择五只双羊母羊进行屠宰。结果表明,NEB导致体重显着下降,屠体重量,羔羊的出生和断奶重量(P<0.05)。此外,NEB引起血清生化指标的改变,如非酯化脂肪酸和β-羟基丁酸水平升高,胆固醇和白蛋白水平降低(P<0.05)。瘤胃发酵和上皮参数也受到影响,随着乙酸浓度的降低,丁酸,总酸和瘤胃乳头长度减少(P<0.05)。此外,NEB诱导瘤胃细菌结构和组成的变化,α-多样性指数和瘤胃微生物群落组成差异显著(P<0.05)。瘤胃乳头和母羊胎盘中的基因表达也受到影响,影响与葡萄糖和氨基酸转运相关的基因,扩散,凋亡,血管生成(P<0.05)。这些发现筛选了NEB后母羊瘤胃中的关键微生物群,并强调了与瘤胃功能相关的关键基因。此外,这项研究揭示了NEB对母羊胎盘功能的影响,为调查母羊的营养如何影响繁殖性能提供了基础。这项研究通过考虑瘤胃微生物群和胎盘功能的综合观点来证明营养如何调节生殖性能。
    This study investigated the effects of negative energy balance (NEB) on perinatal ewes, with a focus on changes in growth performance, serum biochemical parameters, rumen fermentation, ruminal bacteria composition, placental phenotype-related indicators, and expression levels of genes related to placental function. Twenty ewes at 130 days of gestation were randomly allocated to either the positive energy balance (PEB) or NEB groups. In the experiment, ewes in the PEB group were fed the same amount as their intake during the pre-feeding baseline period, while ewes in the NEB group were restricted to 70% of their individual baseline feed intake. The experiment was conducted until 42 days postpartum, and five double-lamb ewes per group were selected for slaughter. The results demonstrated that NEB led to a significant decrease in body weight, carcass weight, and the birth and weaning weights of lambs (P < 0.05). Additionally, NEB caused alterations in serum biochemical parameters, such as increased non-esterified fatty acids and β-hydroxybutyrate levels and decreased cholesterol and albumin levels (P < 0.05). Rumen fermentation and epithelial parameters were also affected, with a reduction in the concentrations of acetic acid, butyric acid, total acid and a decrease in the length of the rumen papilla (P < 0.05). Moreover, NEB induced changes in the structure and composition of ruminal bacteria, with significant differences in α-diversity indices and rumen microbial community composition (P < 0.05). Gene expression in rumen papilla and ewe placenta was also affected, impacting genes associated with glucose and amino acid transport, proliferation, apoptosis, and angiogenesis (P < 0.05). These findings screened the key microbiota in the rumen of ewes following NEB and highlighted the critical genes associated with rumen function. Furthermore, this study revealed the impact of NEB on placental function in ewes, providing a foundation for investigating how nutrition in ewes influences reproductive performance. This research demonstrates how nutrition regulates reproductive performance by considering the combined perspectives of rumen microbiota and placental function.
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  • 文章类型: Journal Article
    作为我国宝贵的绵羊种质资源,湖羊以其高生育力和美丽的波浪状羊皮而闻名。它们的独特特征随着时间的推移通过人工和自然选择的结合而演变。识别湖羊的选择特征可以提供对选择机制的直接了解,并进一步发现与受选择的品种特异性性状相关的候选基因。这里,我们对206只湖羊进行了全基因组重测序,每个都有大约6倍的覆盖深度。然后我们采用了三种互补的方法,包括复合似然比,整合单倍型纯合性评分和纯合性运行的检测,以检测选择签名。总的来说,通过多种方法同时鉴定了10个显示选择特征的候选基因组区域。跨越88.54Mb。注释后,这些基因组区域共有92个独特的基因。有趣的是,32个与繁殖相关的候选基因分布在检测到的9个基因组区域。在他们当中,其中两个是明星候选人:BMPR1B和GNRH2,两者都与生育率有关联,HOXA基因簇(HOXA1-5,HOXA9,HOXA10,HOXA11和HOXA13)也与生育力有关。此外,我们确定了与毛囊发育相关的其他基因(LAMTOR3,EEF1A2),耳朵大小(HOXA1,KCNQ2),脂肪尾巴形成(HOXA10,HOXA11),生长发育(FAF1,CCNDBP1,GJB2,GJA3),脂肪沉积(ACOXL,JAZF1,HOXA3,HOXA4,HOXA5,EBF4),免疫(UBR1,FASTKD5)和采食量(DAPP1,RNF17,NPBWR2)。我们的研究结果为湖羊品种特异性性状选择的遗传机制提供了新的见解,并为绵羊遗传改良计划提供了参考。
    As an invaluable Chinese sheep germplasm resource, Hu sheep are renowned for their high fertility and beautiful wavy lambskins. Their distinctive characteristics have evolved over time through a combination of artificial and natural selection. Identifying selection signatures in Hu sheep can provide a straightforward insight into the mechanism of selection and further uncover the candidate genes associated with breed-specific traits subject to selection. Here, we conducted whole-genome resequencing on 206 Hu sheep individuals, each with an approximate 6-fold depth of coverage. And then we employed three complementary approaches, including composite likelihood ratio, integrated haplotype homozygosity score and the detection of runs of homozygosity, to detect selection signatures. In total, 10 candidate genomic regions displaying selection signatures were simultaneously identified by multiple methods, spanning 88.54 Mb. After annotating, these genomic regions harbored collectively 92 unique genes. Interestingly, 32 candidate genes associated with reproduction were distributed in nine genomic regions detected. Out of them, two stood out as star candidates: BMPR1B and GNRH2, both of which have documented associations with fertility, and a HOXA gene cluster (HOXA1-5, HOXA9, HOXA10, HOXA11 and HOXA13) had also been linked to fertility. Additionally, we identified other genes that are related to hair follicle development (LAMTOR3, EEF1A2), ear size (HOXA1, KCNQ2), fat tail formation (HOXA10, HOXA11), growth and development (FAF1, CCNDBP1, GJB2, GJA3), fat deposition (ACOXL, JAZF1, HOXA3, HOXA4, HOXA5, EBF4), immune (UBR1, FASTKD5) and feed intake (DAPP1, RNF17, NPBWR2). Our results offer novel insights into the genetic mechanisms underlying the selection of breed-specific traits in Hu sheep and provide a reference for sheep genetic improvement programs.
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  • 文章类型: Journal Article
    前期研究表明,BMP7基因在不同形态类型的湖羊羔羊皮中差异表达,其表达水平与不同类型毛囊指数显著相关,但BMP7基因差异表达的分子机制尚不清楚。本研究探讨了DNA甲基化对BMP7转录表达的影响。首先,我们发现,使用qRT-PCR和双荧光素酶报告基因分析,在5-Aza-脱氧胞苷诱导的去甲基化处理后,BMP7基因的mRNA表达和BMP7基因核心启动子的活性上调.然后,我们发现,通过qRT-PCR,5-氮杂脱氧胞苷诱导的去甲基化处理后,湖羊DPCs的体外增殖得到促进,CCK-8和EdU分析,DNMT1在DPC中的过表达诱导了相反的作用。此外,细胞周期测定结果表明,在5-氮杂脱氧胞苷诱导的去甲基化处理后,S期细胞的百分比增加,DNMT1在DPC中过表达后,S期细胞的百分比降低。本研究表明,BMP7基因在不同模式湖羊羊皮中的差异表达可能受到DNA甲基化修饰的调控。此外,DNA甲基化可以调控湖羊DPCs的增殖和细胞周期。
    Previous studies have shown that the BMP7 gene is differentially expressed in Hu sheep lamb skin of different pattern types, and its expression level is significantly correlated with hair follicle indices of different pattern types, but the molecular mechanism of the differential expression of the BMP7 gene remains unclear. This study investigated the effect of DNA methylation on the transcriptional expression of BMP7. Firstly, we found that the mRNA expression of the BMP7 gene and the activity of the core promoter of the BMP7 gene were upregulated after 5-Aza-Deoxycytidine-induced demethylation treatment using qRT-PCR and double luciferase reporter assay. Then, we found that the proliferation of Hu sheep DPCs in vitro was promoted after 5-Aza-Deoxycytidine-induced demethylation treatment through qRT-PCR, CCK-8, and EdU assay, and that the overexpression of DNMT1 in DPCs induced the opposite effect. In addition, the results of the cell cycle assay reveal that the percentage of cells in the S phase was increased after 5-Aza-Deoxycytidine-induced demethylation treatment, and that the percentage of cells in the S phase was decreased after overexpression of DNMT1 in DPCs. This study indicated that the differential expression of the BMP7 gene in different patterns of Hu sheep lamb skin may be regulated by DNA methylation modification. In addition, DNA methylation can regulate the proliferation and cell cycle of DPCs in Hu sheep.
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  • 文章类型: Journal Article
    湖羊是我国特有的繁殖潜力巨大的品种,近年来,其繁殖程度一直在稳步上升。本实验研究对象为8月龄湖羊(n=112)。首先,增长业绩,对其眼部肌肉质量的屠宰性能和肉质进行了评估,同时他们的活重,屠体重量,身体长度,身体高度,胸围,胸深和管围分别为33.81±5.47kg,17.43±3.21kg,60.36±4.41厘米,63.25±3.88cm,72.03±5.02cm,30.70±2.32厘米和7.36±0.56厘米,公羊和母羊之间差异显著(P<0.01)。在此之后,转录组测序已经完成,并使用加权共表达网络分析(WGCNA)方法鉴定与生长性能相关的候选基因,用于识别15个模块,绿松石和蓝色模块与生长和屠宰性能的关联性最强,分别。我们发现了hub基因,如ARHGAP31,EPS8,AKT3,EPN1,PACS2,KIF1C,C12H1orf115、FSTL1、PTGFRN和IFIH1在基因模块中的衔接与生长和屠宰表现有关。我们的研究确定了与湖羊生长和屠宰性能相关的枢纽基因,在他们的肌肉生长中起着重要作用,器官和软骨发育,血管发育和能量代谢途径。我们的发现可能导致开发潜在有用的生物标志物,用于选择绵羊和其他牲畜的生长和屠宰性能相关属性。
    Hu sheep are a unique breed in our country with great reproductive potential, the extent of whose breeding has been steadily rising in recent years. The study subjects in this experiment were 8-month-old Hu sheep (n = 112). First of all, the growth performance, slaughter performance and meat quality of their eye muscle quality were assessed, meanwhile their live weight, carcass weight, body length, body height, chest circumference, chest depth and tube circumference were respectively 33.81 ± 5.47 kg, 17.43 ± 3.21 kg, 60.36 ± 4.41 cm, 63.25 ± 3.88 cm, 72.03 ± 5.02 cm, 30.70 ± 2.32 cm and 7.36 ± 0.56 cm, with a significant difference between rams and ewes (P < 0.01). Following that, transcriptome sequencing was done, and candidate genes related to growth performance were identified using the weighted co-expression network analysis (WGCNA) approach, which was used to identified 15 modules, with the turquoise and blue modules having the strongest association with growth and slaughter performance, respectively. We discovered hub genes such as ARHGAP31, EPS8, AKT3, EPN1, PACS2, KIF1C, C12H1orf115, FSTL1, PTGFRN and IFIH1 in the gene modules connected with growth and slaughter performance. Our research identifies the hub genes associated with the growth and slaughter performance of Hu sheep, which play an important role in their muscle growth, organ and cartilage development, blood vessel development and energy metabolic pathways. Our findings might lead to the development of potentially-useful biomarkers for the selection of growth and slaughterer performance-related attributes of sheep and other livestock.
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  • 文章类型: Journal Article
    本研究的目的是检测分泌型卷曲相关蛋白5(SFRP5)在湖羊卵巢中的表达模式,并利用RNA-seq探索SFRP5在绵羊颗粒细胞(GCs)中的关键下游因子。在本研究中,SFRP5在卵巢中广泛表达,并在卵泡发育的各个阶段定位于GC和卵母细胞。此外,SFRP5的表达随卵泡直径的增加而增加。与阴性对照相比,SFRP5敲低可促进EdU阳性细胞率,增加PCNAmRNA和蛋白水平,而SFRP5过表达具有相反的作用。此外,随着SFRP5敲低后CCNB1,CCND1,CDK1和CDK4的上调,细胞周期从G0/G1期被推进至S期.此外,SFRP5过表达通过增加Caspase3蛋白水平增强GCs的凋亡。SFRP5击倒后,差异表达基因主要富集在PI3K/AKT,MAPK,Wnt,和河马信号通路,和几个相关的候选基因,如MMP1,MMP3,SFRP4,INHA,TGFA,对CASP3进行筛选。总的来说,这项研究增强了我们对SFRP5在湖羊GCs中表达的理解,及其在卵泡发育中的功能。
    The objective of this study was to examine the expression patterns of secreted frizzled-related protein 5 (SFRP5) in the ovaries of Hu sheep and to explore the key downstream factors of SFRP5 in sheep granulosa cells (GCs) using RNA-seq. In the present study, SFRP5 was widely expressed in the ovary and localized to GCs and oocytes during various stages of follicular development. In addition, the expression of SFRP5 increased with follicular diameter. In contrast to the negative control, SFRP5 knockdown promoted the EdU-positive cell rate with an increase in PCNA mRNA and protein levels, whereas SFRP5 overexpression had the opposite effect. In addition, the cell cycle was propelled from the G0/G1 phase to the S phase with the upregulation of CCNB1, CCND1, CDK1, and CDK4 after SFRP5 knockdown. Moreover, SFRP5 overexpression enhanced the apoptosis of GCs with increased Caspase3 protein levels. Following SFRP5 knockdown, differentially expressed genes were mainly enriched in the PI3K/AKT, MAPK, Wnt, and Hippo signaling pathways, and several related candidate genes such as MMP1, MMP3, SFRP4, INHA, TGFA, and CASP3 were screened. In general, this study enhances our understanding of the expression of SFRP5 in the GCs of Hu sheep, along with its functions in follicular development.
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  • 文章类型: Journal Article
    湖羊(HS),一种带有FecB突变基因的绵羊,以其“全年发情期和多胎”而闻名,是研究牲畜高繁殖力机制的理想模型。通过分析和比较湖羊和其他绵羊品种的基因组选择特征,我们确定了一系列可能在湖羊高繁殖力机制中起作用的候选基因。在这项研究中,我们对6个绵羊品种进行了全基因组重测序,筛选出与高繁殖性状显著相关的关键突变。值得注意的是,在HS和其他5个品种中,通过固定指数(FST)和交叉群体复合似然比(XP-CLR)方法选择CC2D1B基因.值得注意的是,HS中的CC2D1B基因与其他绵羊品种不同,并鉴定出7个错义突变.此外,连锁不平衡(LD)分析显示该特定基因区域存在强烈的连锁不平衡。随后,通过对湖羊的FecB基因型进行不同的分组,全基因组选择性信号分析筛选了几个与繁殖相关的基因,例如BMPR1B和PPM1K。此外,FST分析确定了与生殖性状相关的功能基因,包括RHEB,HSPA2,PPP1CC,HVCN1和CCDC63。此外,在CCDC63基因中发现了一个错义突变,HS的高繁殖(HR)组和低繁殖(LR)组的单倍型不同。总之,我们在全基因组水平上发现了六个不同种绵羊的遗传分化。此外,我们确定了一组与湖羊繁殖性能相关的基因,并观察了这些基因在不同品种中的差异。这些发现为理解绵羊高产量性状背后的遗传机制奠定了理论基础。
    Hu sheep (HS), a breed of sheep carrying the FecB mutation gene, is known for its \"year-round estrus and multiple births\" and is an ideal model for studying the high fecundity mechanisms of livestock. Through analyzing and comparing the genomic selection features of Hu sheep and other sheep breeds, we identified a series of candidate genes that may play a role in Hu sheep\'s high fecundity mechanisms. In this study, we conducted whole-genome resequencing on six breeds and screened key mutations significantly correlated with high reproductive traits in sheep. Notably, the CC2D1B gene was selected by the fixation index (FST) and the cross-population composite likelihood ratio (XP-CLR) methods in HS and other five breeds. It was worth noting that the CC2D1B gene in HS was different from that in other sheep breeds, and seven missense mutations have been identified. Furthermore, the linkage disequilibrium (LD) analysis revealed a strong linkage disequilibrium in this specific gene region. Subsequently, by performing different grouping based on FecB genotypes in Hu sheep, genome-wide selective signal analysis screened several genes related to reproduction, such as BMPR1B and PPM1K. Besides, FST analysis identified functional genes related to reproductive traits, including RHEB, HSPA2, PPP1CC, HVCN1, and CCDC63. Additionally, a missense mutation was found in the CCDC63 gene and the haplotype was different between the high reproduction (HR) group and low reproduction (LR) group in HS. In summary, we discovered genetic differentiation among six distinct breeding sheep breeds at the whole genome level. Additionally, we identified a set of genes which were associated with reproductive performance in Hu sheep and visualized how these genes differed in different breeds. These findings laid a theoretical foundation for understanding genetic mechanisms behind high prolific traits in sheep.
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