Fish diversity

鱼类多样性
  • 文章类型: Journal Article
    全球淡水生物多样性下降的主要原因之一可以归因于大坝建设导致的水文条件变化。然而,当前的大多数研究都集中在单个或有限数量的水坝上。这里,我们进行了季节性鱼类调查,使用环境DNA(eDNA)方法,在吴江干流(长江支流,中国)以研究大规模梯级水电开发对鱼类多样性格局变化的影响。eDNA调查显示,与外来鱼类相比,本地鱼类物种有所减少。鱼类群落结构也发生了变化,随着优势嗜变鱼类的减少,小型鱼类的增加,以及储层物种组成的均质化。此外,环境因素,如温度,溶解氧和储层年龄,对鱼类群落多样性有显著影响。这项研究为评估级联发展对鱼类多样性模式的影响提供了基础信息。
    One of the main reasons for the decline in global freshwater biodiversity can be attributed to alterations in hydrological conditions resulting from dam construction. However, the majority of current research has focused on single or limited numbers of dams. Here, we carried out a seasonal fish survey, using environmental DNA (eDNA) method, on the Wujiang River mainstream (Tributaries of the Yangtze River, China) to investigate the impact of large-scale cascade hydropower development on changes in fish diversity patterns. eDNA survey revealed that native fish species have decreased in contrast to alien fish. There was also a shift in fish community structure, with declines of the dominant rheophilic fish species, an increase of the small-size fish species, and homogenization of species composition across reservoirs. Additionally, environmental factors, such as temperature, dissolved oxygen and reservoir age, had a significant effect on fish community diversity. This study provides basic information for the evaluation of the impact of cascade developments on fish diversity patterns.
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  • 文章类型: Journal Article
    in鱼属Rineloricaria的物种在Sul河流域很常见,在巴西东南部;在这里,我们对居住在盆地的属物种的分类学多样性和地理分布进行了修订,基于新的形态学和分子数据。基于细胞色素C氧化酶亚基1核苷酸序列的五种物种定界方法产生了可比的分子操作分类单位。自动发现条形码间隙,通过自动分区组装物种,条形码索引号,泊松树过程方法的贝叶斯实现支持五个进化谱系的识别。这些分类单位被分配给先前描述的黑龙,Rineloricariasteindachneri,Rineloricariazawadzkii,和裸眼Rineloricaria,还有一个没有描述的物种。使用广义的混合Yule合并定界方法将R.zawadzkii进一步分为两个种内地理结构的谱系。最大可能性系统发育分析显示,南Paraíba的五个谱系与巴西南部和东南部的不同物种有更紧密的关系(RibeiradeIguape,LagoadosPatos,乌拉圭,巴拉圭,和巴拉那河流域)比彼此。根据对样品的分析,最近收集的材料,和鱼类学收藏的标本,根据当前的描述性标准重新描述了描述不佳的R.nigricauda和R.steindachneri。正式描述了来自Sul河中上游Paraíbado流域的未描述物种。一个新物种的描述,以及对黑龙和R.Steindachneri物种边界的描述,有助于了解SulParaíbadoRiver流域和巴西东南部邻近的沿海排水沟。提供了在Sul河流域发生的Rineloricaria物种的识别密钥。
    Species of the catfish genus Rineloricaria are common in the Paraíba do Sul River basin, in southeastern Brazil; here we present a revision of the taxonomic diversity and geographic distribution of the species of the genus inhabiting the basin, based on novel morphologic and molecular data. Five species delimitation methods based on cytochrome C oxidase subunit 1 nucleotide sequences yielded comparable molecular operational taxonomic units. The automatic barcode gap discovery, assemble species by automatic partitioning, barcode index number, and Bayesian implementation of the Poisson tree process methods supported the recognition of five evolutionary lineages. These taxonomic units were assigned to the previously described Rineloricaria nigricauda, Rineloricaria steindachneri, Rineloricaria zawadzkii, and Rineloricaria nudipectoris, and an additional undescribed species. R. zawadzkii was further divided into two intraspecific geographically structured lineages using the generalized mixed Yule coalescent delimitation method. A maximum likelihood phylogenetic analysis revealed that the five lineages from the Paraíba do Sul have closer relationships to different species from southern and southeastern Brazil (Ribeira de Iguape, Lagoa dos Patos, Uruguay, Paraguay, and Parana river basins) than to each other. Based on the analysis of lectotypes, recently collected material, and specimens from ichthyological collections, the poorly described R. nigricauda and R. steindachneri are redescribed following current descriptive standards. The undescribed species from the middle and upper Paraíba do Sul River basin is formally described. The description of a new species, along with the description of species boundaries in R. nigricauda and R. steindachneri, contributes to the knowledge of the ichthyofauna of the Paraíba do Sul River basin and adjacent coastal drainages of southeastern Brazil. An identification key for the species of Rineloricaria occurring in the Paraíba do Sul River basin is provided.
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  • 文章类型: Journal Article
    高原河流生态系统通常非常脆弱,并且对环境变化具有响应性。环境变化下高原河流鱼类多样性和群落聚集的驱动机制对生态与环境的跨学科研究提出了显著的复杂性。本研究结合分子生物学技术和数学模型,以确定影响高原河流淡水鱼多样性空间异质性和驱动鱼类群落组装的机制。通过利用环境-DNA元编码和零模型,这项研究揭示了随机过程对中国黄河流域of水高原河(YRB)鱼类多样性变化和群落组装的影响。这项研究确定了30个操作分类单位(OTU),对应于20种不同的鱼类。这项研究的结果表明,西宁上游地区的鱼类α多样性显着高于中下游地区(Shannon指数:P=0.017和Simpson:P=0.035)。除了我们测量的海拔高度(P=0.023)外,没有发现这种模式与任何其他环境因素有关。Further,研究表明,of水河中鱼类群落的聚集主要取决于随机生态过程。这些发现表明,海拔不是影响高原河流鱼类生物多样性模式的主要因素。在高原河流中,海拔高度鱼类群落的空间异质性主要由生境破碎化条件下的随机过程决定,而不是任何其他物理化学环境因素。河流下游河道连通性的局限性可能是of水河鱼类群落随机过程的主要原因。将生态过程纳入eDNA方法对于未来监测和评估高原河流中的鱼类生物多样性和群落聚集具有巨大潜力。
    Plateau river ecosystems are often highly vulnerable and responsive to environmental change. The driving mechanism of fish diversity and community assembly in plateau rivers under changing environments presents a significant complexity to the interdisciplinary study of ecology and environment. This study integrated molecular biological techniques and mathematical models to identify the mechanisms influencing spatial heterogeneity of freshwater fish diversity and driving fish community assembly in plateau rivers. By utilizing environmental-DNA metabarcoding and the null model, this study revealed the impact of the stochastic process on fish diversity variations and community assembly in the Huangshui Plateau River of the Yellow River Basin (YRB) in China. This research identified 30 operational taxonomic units (OTUs), which correspond to 20 different fish species. The findings of this study revealed that the fish α-diversity in the upstream region of Xining is significantly higher than in the middle-lower reach (Shannon index: P = 0.017 and Simpson: P = 0.035). This pattern was not found to be related to any other environmental factors besides altitude (P = 0.023) that we measured. Further, the study indicated that the assembly of fish communities in the Huangshui River primarily depends on stochastic ecological processes. These findings suggested that elevation was not the primary factor impacting the biodiversity patterns of fish in plateau rivers. In plateau rivers, spatial heterogeneity of fish community on elevation is mainly determined by stochastic processes under habitat fragmentation, rather than any other physicochemical environmental factors. The limitations of connectivity in the downstream channel of the river could be taken the mainly responsibility for stochastic processes of fish community in Huangshui River. Incorporating ecological processes in the eDNA approach holds great potential for future monitoring and evaluation of fish biodiversity and community assembly in plateau rivers.
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  • 文章类型: Journal Article
    “印度国家鱼类”的概念强调了分布在该国各个州的优先鱼类的重要性和意义。这篇综述文章从各个角度系统地记录了国家鱼类的现状,确定普遍存在的知识差距,并强调了对保护和可持续利用这些宝贵遗传资源至关重要的问题和战略计划。总共检查了8357份出版物,以获取有关国家鱼类物种的综合信息,在八类中选择了适当的项目:生物学,生理和营养,水产养殖,栖息地和环境参数,遗传学和生物技术,收获和采后,鱼类健康管理,和其他人。综合信息用于介绍国家鱼类物种的研究和开发现状。在渔业管理和养护水产养殖的角度下,还描述了要解决的知识差距。根据调查结果,在各种原位和异地保护措施下,提出并讨论了有针对性的保护计划的战略计划。Further,申报中涉及的部门流程,利益相关者参与的重要性,即,当地社区和决策者,在促进有效的保护措施方面,并指出了利用这些宝贵鱼类遗传资源的规划。
    The concept of \"state fishes of India\" highlights the importance and significance of the prioritized fish species distributed across various states within the country. This review article systematically documents the current status of state fishes from various perspectives, identifies the prevailing knowledge gaps, and also highlights the issues and strategic plans essential for the conservation and sustainable utilization of these valuable genetic resources. A total of 8357 publications were checked for the consolidated information on state fish species, and the appropriate items were selected under eight categories: biology, physiology and nutrition, aquaculture, habitat and environmental parameters, genetics and biotechnology, harvest and postharvest, fish health management, and others. The synthesized information was used to present the current status of research and development on state fish species. The knowledge gaps that are to be addressed are also depicted under the perspectives of fisheries management and conservation aquaculture. Based on the findings, strategic plans for the targeted conservation programmes are proposed and discussed under various in situ and ex situ conservation measures. Further, the departmental processes involved in the declaration, the importance of stakeholder involvement, namely, local communities and policymakers, in fostering effective conservation measures, and planning for utilization of these valuable fish genetic resources are also indicated.
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  • 文章类型: Journal Article
    这项研究调查了印度西海岸暂时封闭的沙洲河口的鱼类聚集,跨越不同的区域和季节。中等物种多样性(54种),低物种丰度,从较低到较高河口梯度的鱼类多样性变化(较低区域的计数较高,并从中部到上部区域减少),河口的显着特征是海洋移民(河口使用)和食肉物种(摄食方式)的患病率较高。独特的空间,季节性,在河口记录了基于河口状态的变化,基于多样性指数和分类单元的数量。在季风前发现了峰值多样性和丰度,在河口张开的状态下。整个河口梯度受到多种压力源的人为影响,除了河口地区,这受到海洋连通性的青睐。迄今为止,Poonthura河口(PE)的鱼类组合结构尚未受到人为干扰的影响。然而,河口的生长和苗圃功能受到了严重损害。幼鱼在生态系统中占主导地位,以及来自点源和非点源的普遍人为压力强调了长期维持沿海物种种群的必要性,以及需要为这个脆弱的生态系统制定和实施紧急管理战略。
    This study investigates the fish assemblage in a temporarily-closed sandbar estuary along India\'s west coast, across different zones and seasons. Moderate species diversity (54 species), low species abundance, varying fish diversity from lower to upper estuarine gradient (higher counts in lower zones, and decreasing from middle to upper zones), and higher prevalence of marine migrants (estuarine use) and piscivorous species (feeding mode) were the significant characteristics of the estuary. Distinct spatial, seasonal, and estuarine mouth state-based variations were recorded in the estuary, based on diversity indices and count of taxa. Peak diversity and abundance were noted during the pre-monsoon, and during the open mouth state of the estuary. The entire estuarine gradient is anthropogenically impacted by a multitude of stressors, except at the estuarine mouth region, which is favored by marine connectivity. The fish assemblage structure in Poonthura estuary (PE) has thus far remained unaffected by anthropogenic disturbances. Nevertheless, growth and nursery function of the estuary have been significantly compromised. The predominance of juvenile fish in the ecosystem, and prevailing anthropogenic stressors from point and non-point sources underscore the necessity for long-term maintenance of the population of coastal species, as well as a need for developing and implementing urgent management strategies for this fragile ecosystem.
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  • 文章类型: Journal Article
    目前有76个有效物种,马尾鼻cat鱼属Ancistrus是第四大种类丰富的cat鱼属,然而Ancistrus的多样性仍然被低估,许多物种仍未被描述。对于亚马逊的秘鲁安第斯源头尤其如此,它们富含未命名的Ancistrus物种,但最近很少受到分类学的关注。我们描述了来自帕尔卡祖河支流的一种独特条纹的新Ancistrus物种,在Pachitea-Ucayali-Amazonas流域。新物种与所有同类物种的不同之处在于具有黑色,覆盖头部的蛭状线条和两到四个明显的黑色,平行,从头部到尾鳍的外侧身体条纹(vs.身体均匀着色或头部和身体上有深色或浅色斑点或斑点,或侧面的黑色蛭状线条)。新物种是从丰富的Ucayali河鱼鱼中描述的Ancistrus的第五个有效物种。以前在水族馆鱼类贸易中被认为是L267。
    With 76 currently valid species, the bushynose catfish genus Ancistrus is the fourth most species-rich catfish genus, yet Ancistrus diversity remains underestimated, with many species still undescribed. This is especially true of the Peruvian Andean headwaters of the Amazon, which are rich in unnamed Ancistrus species but have received little recent taxonomic attention. We describe a distinctively striped new Ancistrus species from tributaries of the Palcazú River, in the Pachitea-Ucayali-Amazonas drainage basin. The new species differs from all congeners by having black, vermiculated lines covering the head and two to four distinct black, parallel, lateral body stripes from head to caudal fin (vs. body uniformly colored or with dark or light spots or blotches over head and body, or black vermiculate lines on flanks). The new species is the fifth valid species of Ancistrus described from the rich Ucayali River ichthyofauna. It has previously been recognized in the aquarium fish trade as L267.
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  • 文章类型: Journal Article
    为了监测鱼类生物多样性的变化,并阐明造成这些变化的因素,定量分析了尼罗河三角洲湖泊过去30年的登陆成分(LC)。LC数据表明目标物种向海底机会物种转移。在PERMANOVA和PCA图中突出显示的两个主要间隔之间存在显着差异(P<0.001);第一个间隔(1991-2002)以罗非鱼和稀有物种为主,而第二个间隔(2003-2020年)主要是机会鲶鱼和鱼。观察到物种丰富度和稀有物种登陆的显着下降,与罗非鱼等其他主要物种相比,稀有类群要么被过度开发,要么可能受到污染水平增加的积极影响。相比之下,机会鱼种,如鲶鱼和鱼,由于它们能够耐受季节性污染相关的缺氧,因此在这种污染的水中蓬勃发展。
    To monitor the changes in fish biodiversity and to elucidate the factors responsible for these changes, the landings composition (LC) over the past 30 years in the Nile-Delta lakes was quantitatively analyzed. The LC data indicates a shift in target species towards demersal opportunistic species. A significant difference (P < 0.001) between two main intervals highlighted in both PERMANOVA and PCA plot; the first interval (1991-2002) is dominated by Tilapia and rare species, while the second interval (2003-2020) is dominated by the opportunistic catfish and mullet species. Noticeable declines in species richness and landings of rare species were observed, where rare taxa either have been overexploited or they may be positively affected by increasing pollution levels than do other dominated species such as Tilapia. In contrast, opportunistic fish species such as catfish and mullet, have flourished in such polluted water due to their ability to tolerate seasonal pollution-related hypoxia.
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  • 文章类型: Journal Article
    淡水生态系统受到人类的巨大威胁,其中生境异质性最为明显,是鱼类多样性下降的重要原因之一。这种现象在乌江特别突出,其中,干流的连续急流被11个梯级水电水库划分为12个相互隔离的部分。基于常规调查方法对生态环境的危害更大的事实,本研究采用高效、无创的环境DNA元编码(eDNA)方法对乌江干流12个河段进行了水生态调查。共获得2299个操作分类单位(OTU),对应97种,包括4种国家保护鱼类和12种外来物种。结果表明,乌江干流鱼类群落结构,最初是由嗜流变鱼物种主导的,已经改变了。乌江干流库区之间的鱼类物种多样性和物种组成存在差异。在梯田水电和过度捕捞等人为因素的影响下,该地区的鱼类种类逐渐减少。因此,鱼类种群表现出物种小型化的趋势,土著鱼类受到严重威胁。此外,通过eDNA方法监测的鱼类组成被发现接近乌江历史信息的鱼类组成,这表明eDNA方法可以作为该盆地常规方法的补充工具。
    Freshwater ecosystems are under great threat from humans, among which habitat heterogeneity is the most obvious, being one of the important reasons for the decline of fish diversity. This phenomenon is particularly prominent in the Wujiang River, where the continuous rapids of the mainstream have been divided into 12 mutually isolated sections by 11 cascade hydropower reservoirs. Based on the fact that conventional survey methods are more harmful to the ecological environment, the efficient and noninvasive environmental DNA metabarcoding (eDNA) approach was used in this study to conduct an aquatic ecological survey of the 12 river sections of the mainstream of the Wujiang River. A total of 2299 operational taxonomic units (OTUs) were obtained, corresponding to 97 species, including four nationally protected fish species and 12 alien species. The results indicate that the fish community structure of the Wujiang River mainstream, which was originally dominated by rheophilic fish species, has been changed. And there are differences in fish species diversity and species composition among the reservoir areas of the mainstream of the Wujiang River. The fish species in the area have gradually declined under the influence of anthropogenic factors such as terraced hydropower and overfishing. The fish populations consequently have demonstrated a tendency to be species miniaturized, and the indigenous fish are severely threatened. In addition, the fish composition monitored by the eDNA approach was found to be close to the fish composition of historical information on the Wujiang River, indicating that eDNA approach may be used as a complementary tool to conventional methods in this basin.
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  • 文章类型: Journal Article
    传统上,根据形态特征鉴定鱼类。尽管这些分类描述是必不可少的,在某些情况下,区分这些物种的形态特征显示出边际差异。例如,在喜马拉雅山的Poonch河里,有21种,其中一些在形态上相似,这些物种之间的分类区别尚不清楚。因此,在这项研究中,我们使用了两个线粒体基因的序列,细胞色素b(Cytb)和一个更大的核糖体亚基(16SrRNA),以及形态学分析,以解决六种鱼类之间的任何分类歧义。最大似然结果显示,所有物种都根据其科和属进行聚类。表型分析也支持这一说法,就像所有不同属的物种一样,Tor,Garra,Traqilabeo,和眼胸被分组在它们的特定集群中,它表明,一个单独类别的物种具有共同的形态特征。虽然这些物种的遗传分析表明核苷酸多样性(p)和单倍型多样性,Cytb的Hd值为0.644,16SrRNA的Hd值为0.899,证实了河流中丰富的遗传多样性。总的来说,我们建议在界定鱼类物种时采用综合方法比单独的方法更有效,并且可以用于快速诊断物种并了解物种之间的进化关系。
    Traditionally, species of fish are identified based on morphological characteristics. Although these taxonomic descriptions are essential, there are cases where the morphological characters distinguishing these species show marginal differences. For instance, in the Poonch River in the Himalayas, there are 21 species, out of which some are morphologically similar, and the taxonomic distinction between these species is unclear. Therefore, in this study, we used sequences from two mitochondrial genes, Cytochrome b (Cyt b) and a larger ribosomal subunit (16S rRNA), as well as the morphological analysis to address any taxonomic ambiguities among the six fish species. Maximum Likelihood results revealed that all the species were clustered according to their families and genera. The phenotypic analysis also supported this statement, as all the species of different genera like Schizothorax, Tor, Garra, Traqilabeo, and Glyptothorax are grouped in their particular cluster, it shows that species of a separate class share a mutual morphological characteristic. While genetic analyses of these species suggest nucleotide diversity (p) and haplotype diversity, with Hd values as 0.644 for Cyt b and 0.899 for 16S rRNA, confirming the rich genetic diversity in the river. Overall, we recommend that the integrative approach in delimiting the fish species is more effective than the individual one and can be used to rapidly diagnose a species and understand the evolutionary relationship between the species.
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  • 文章类型: Journal Article
    TanguarHaor(TH),一个生态临界区(ECA)和一个具有全球意义的拉姆萨尔遗址,是孟加拉国经济的重要湿地生态系统,生态,社会,和文化方面。鱼,水生植物,两栖动物,爬行动物,鸟,在这个荒地中发现的花卉和动物区系成分中,哺乳动物是值得注意的。不幸的是,对其自然资源的不可持续开发对TH生态系统构成了严重威胁。因此,本研究的主要目的是回顾鱼类生物多样性的现状,以及生物多样性丧失的驱动因素和TH生态系统的管理问题。共有35个家庭下的143种鱼类(137种土著和6种外来鱼类),在过去的二十年中,记录了12个订单。由于气候的影响,豪尔的物种多样性随着时间的推移而发生变化,人为的,社会经济,和政策相关的驱动因素。此外,高度依赖渔业资源,贫穷,缺乏管理TH渔业的能力是鱼类多样性下降的原因。因此,通过当地社区的积极参与,以生态系统为基础的共同管理,建立平衡的捕鱼策略,强烈建议为高度依赖的贫困收割机加强替代生计,以适当管理这一宝贵的湿地生态系统。此外,这项审查为研究的湿地提出了即时和有用的保护措施,包括全面的库存评估,建立基因库和鱼类保护区,输入和输出控制的组合,并根据ECA和RAMSAR指南进行监管。
    Tanguar Haor (TH), an ecologically critical area (ECA) and a Ramsar site of worldwide significance, is an essential wetland ecosystem for the Bangladesh\'s economic, ecological, social, and cultural aspects. Fish, aquatic plants, amphibians, reptiles, birds, and mammals are notable among the floral and faunal compositions found in this haor. Unfortunately, unsustainable exploitation of its natural resources poses a serious threat to the TH ecosystem. Therefore, the broad objective of this study was to review the status of fish biodiversity along with the driving factors of biodiversity loss and the management issues of the TH ecosystem. A total of 143 species of fishes (137 indigenous and 6 exotic) under 35 families, and 12 orders were documented during the last two decades. Species diversity of the haor has been changed over time due to the effects of climatic, anthropogenic, socioeconomic, and policy related drivers. Furthermore, high dependency on fisheries resources, poverty, and the lack of empowerment to manage the TH fishery were responsible for fish diversity decline. Therefore, ecosystem based co-management through active participation of local community, establishment of balanced fishing tactics, and strengthening alternative livelihoods for highly depended poor harvesters are strongly recommended for the proper management of this valued wetland ecosystem. Furthermore, this review proposes immediate and useful conservation initiatives for the studied wetlands, including comprehensive stock assessment, establishment of gene banks and fish sanctuaries, a combination of input and output control, and regulation with the ECA and RAMSAR guidelines.
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