Electron Spin Resonance Spectroscopy

电子自旋共振谱
  • 文章类型: Journal Article
    牙釉质中碳酸盐羟基磷灰石的电子自旋共振与铀系列测年(ESR/U系列)相结合,是用于从放射性碳测年范围之外的更新世化石中获得年龄测定的主要技术。这些时间信息可以更好地了解古生物学记录的历时变化,特别是关于人属的进化。鉴于古生物学和考古学地区人类牙齿的相对匮乏,ESR/U系列广泛应用于有蹄类动物的牙齿。然而,ESR/U系列年龄的准确性受到埋藏在沉积物中的搪瓷中铀含量的影响。已经表明,铀含量与碳酸盐羟基磷灰石晶体中原子序的增加呈正相关,后者使用红外光谱测定。在这里,我们提供了来自非洲有蹄类动物的牙釉质的参考红外光谱库,基于磨削曲线法,作为基线,以跟踪不同物种中碳酸盐羟基磷灰石的成岩历史,从而选择保存最好的标本进行测年。
    Electron spin resonance coupled with uranium-series dating (ESR/U-series) of carbonate hydroxyapatite in tooth enamel is the main technique used to obtain age determinations from Pleistocene fossils beyond the range of radiocarbon dating. This chronological information allows to better understand diachronic change in the palaeontological record, especially with regard to the evolution of the genus Homo. Given the relative paucity of human teeth at palaeontological and archaeological localities, ESR/U-series is widely applied to the teeth of ungulate species. However, the accuracy of ESR/U-series ages is greatly affected by the incorporation of uranium in the enamel during burial in sediments. It has been shown that uranium content is positively correlated with an increased degree of atomic order in carbonate hydroxyapatite crystals, the latter determined using infrared spectroscopy. Here we present a reference infrared spectral library of tooth enamel from African ungulates, based on the grinding curve method, which serves as baseline to track the diagenetic history of carbonate hydroxyapatite in different species and thus select the best-preserved specimens for dating.
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  • 文章类型: Journal Article
    光系统I(PSI)是研究电子转移(ET)和能量转换等基本过程的模型系统,这不仅是光合作用的核心,而且对生物能源生产和仿生设备设计具有更广泛的意义。在这项研究中,我们使用电子顺磁共振(EPR)光谱来研究从几种绿藻和蓝细菌物种中分离出的PSI中的关键光诱导电荷分离步骤。光激发后,快速顺序ET通过嵌入蛋白质核心的供体/受体辅因子的两个准对称分支中的任何一个发生,称为A和B分支。使用高频(130GHz)时间分辨EPR(TR-EPR)和氘代技术来增强光谱分辨率,我们观察到,在低温下,原核PSI在A分支中表现出可逆的ET,在B分支中表现出不可逆的ET,而来自真核生物对应物的PSI在两个分支中或仅在B分支中显示可逆的ET。此外,我们观察到低温电荷分离与PSI的末端[4Fe-4S]团簇之间存在显着相关性,称为FA和FB,反映在测量的FA/FB比率中。这些发现增强了我们对PSIET跨不同物种的机制多样性的理解,并强调了实验设计在解决这些差异中的重要性。尽管需要进一步的研究来阐明PSI电荷分离中这些变化的潜在机制和进化意义,这项研究为未来研究蛋白质结构之间复杂的相互作用奠定了基础,ET途径,和光合生物的环境适应。
    Photosystem I (PSI) serves as a model system for studying fundamental processes such as electron transfer (ET) and energy conversion, which are not only central to photosynthesis but also have broader implications for bioenergy production and biomimetic device design. In this study, we employed electron paramagnetic resonance (EPR) spectroscopy to investigate key light-induced charge separation steps in PSI isolated from several green algal and cyanobacterial species. Following photoexcitation, rapid sequential ET occurs through either of two quasi-symmetric branches of donor/acceptor cofactors embedded within the protein core, termed the A and B branches. Using high-frequency (130 GHz) time-resolved EPR (TR-EPR) and deuteration techniques to enhance spectral resolution, we observed that at low temperatures prokaryotic PSI exhibits reversible ET in the A branch and irreversible ET in the B branch, while PSI from eukaryotic counterparts displays either reversible ET in both branches or exclusively in the B branch. Furthermore, we observed a notable correlation between low-temperature charge separation to the terminal [4Fe-4S] clusters of PSI, termed FA and FB, as reflected in the measured FA/FB ratio. These findings enhance our understanding of the mechanistic diversity of PSI\'s ET across different species and underscore the importance of experimental design in resolving these differences. Though further research is necessary to elucidate the underlying mechanisms and the evolutionary significance of these variations in PSI charge separation, this study sets the stage for future investigations into the complex interplay between protein structure, ET pathways, and the environmental adaptations of photosynthetic organisms.
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  • 文章类型: Journal Article
    在本文中,我们展示了急性低剂量中子对大鼠全身的生物学效应,并研究了该水平的中子剂量对诱导体内放射适应性反应的影响.要了解无线电自适应响应,被检查的动物暴露于5和10mSv的急性中子辐射剂量,14天后给予50mSv攻击剂量。辐照后,所有接受单剂量和双剂量的组在取样前都在笼子里呆一天.电子顺磁共振(EPR)方法用于估计血液中辐射诱导的自由基,并测定了一些血液学参数和脂质过氧化(MDA)。在一些抗氧化酶[过氧化氢酶(CAT),超氧化物歧化酶(SOD),和谷胱甘肽(GSH)]。根据中子暴露剂量对七组成年雄性大鼠进行分类。在收获后一周进行所有研究标记的测量,除了血液学标志物,在2小时内。结果表明抗氧化酶的产量较低(CAT降低了1.18-5.83%,SOD由1.47-17.8%,和GSH增长11.3-82.1%)。此外,红细胞分布宽度(RDW)增加(从4.61增加到25.19%)和彗星测定参数,如尾部长度,(从6.16到10.81µm),尾部力矩,(从1.17到2.46µm),在所有暴露于5至50mSv急性剂量辐射的组中,尾部长度(DNA%)的DNA百分比(从9.58到17.32%),分别。这强调了随着急性热中子剂量的增加而增加的有害作用。所研究的所有标记物的放射自适应响应的引入因子的值表明,较低的引发剂量促进较高的适应响应,反之亦然。最终,结果表明DNA%存在显著差异,SOD酶水平,EPR强度,总Hb浓度,和RDW,提示它们作为急性热中子剂量学生物标志物的潜在用途。需要进一步的研究来验证这些测量作为辐射暴露的生物剂量学,包括涉及不同攻击剂量和辐照后行为的RAR响应影响的调查。
    In this paper, we demonstrated the biological effects of acute low-dose neutrons on the whole body of rats and investigated the impact of that level of neutron dose to induce an in vivo radio-adaptive response. To understand the radio-adaptive response, the examined animals were exposed to acute neutron radiation doses of 5 and 10 mSv, followed by a 50 mSv challenge dose after 14 days. After irradiation, all groups receiving single and double doses were kept in cages for one day before sampling. The electron paramagnetic resonance (EPR) method was used to estimate the radiation-induced radicals in the blood, and some hematological parameters and lipid peroxidation (MDA) were determined. A comet assay was performed beside some of the antioxidant enzymes [catalase enzyme (CAT), superoxide dismutase (SOD), and glutathione (GSH)]. Seven groups of adult male rats were classified according to their dose of neutron exposure. Measurements of all studied markers are taken one week after harvesting, except for hematological markers, within 2 h. The results indicated lower production of antioxidant enzymes (CAT by 1.18-5.83%, SOD by 1.47-17.8%, and GSH by 11.3-82.1%). Additionally, there was an increase in red cell distribution width (RDW) (from 4.61 to 25.19%) and in comet assay parameters such as Tail Length, (from 6.16 to 10.81 µm), Tail Moment, (from 1.17 to 2.46 µm), and percentage of DNA in tail length (DNA%) (from 9.58 to 17.32%) in all groups exposed to acute doses of radiation ranging from 5 to 50 mSv, respectively. This emphasizes the ascending harmful effect with the increased acute thermal neutron doses. The values of the introduced factor of radio adaptive response for all markers under study reveal that the lower priming dose promotes a higher adaptation response and vice versa. Ultimately, the results indicate significant variations in DNA%, SOD enzyme levels, EPR intensity, total Hb concentration, and RDWs, suggesting their potential use as biomarkers for acute thermal neutron dosimetry. Further research is necessary to validate these measurements as biodosimetry for radiation exposure, including investigations involving the response impact of RAR with varied challenge doses and post-irradiation behavior.
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  • 文章类型: Journal Article
    人血清白蛋白(HSA)是最丰富的血浆蛋白,其功能是在循环中运输大范围的配体。这些相互作用对人类健康和疾病具有重要意义。已知CuII离子在HSA上的主要结合位点是所谓的氨基末端CuII和NiII结合(ATCUN)基序。然而,目前尚不了解二级结合位点的数量和身份。在这项研究中,我们利用了一套当代电子顺磁共振(EPR)光谱方法来研究重组产生的HSA携带单组氨酸敲除的构建体,目的是表征其内源性CuII离子结合位点。
    Human serum albumin (HSA) is the most abundant plasma protein, which functions to transport a large range of ligands within the circulation. These interactions have important implications for human health and disease. The primary binding site for CuII ions on HSA is known to be the so-called amino-terminal CuII and NiII binding (ATCUN) motif. However, the number and identity of secondary binding sites is currently not understood. In this study, we harnessed a suite of contemporary electron paramagnetic resonance (EPR) spectroscopy methods to investigate recombinantly produced constructs of HSA bearing single-histidine knockouts, with the aim to characterise its endogenous CuII ion binding sites.
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  • 文章类型: Journal Article
    工程血液蛋白可以从氮烯前体如羟胺中选择性地掺入氮,O-取代羟胺,和有机叠氮化物成有机分子。尽管在这些反应中经常调用亚硝基铁类作为反应中间体,它们的先天反应性和瞬时性质使它们的表征具有挑战性。在这里,我们表征了由NH2OH在原珠蛋白活性位点内产生的铁-亚硝酰中间体,该中间体可以进行氮基转移催化,使用UV-vis,电子顺磁共振(EPR)光谱,和高分辨率电喷雾电离质谱(HR-ESI-MS)技术。获得的机理见解导致发现了胺化试剂-亚硝酸盐(NO2-),一氧化氮(NO),和硝酰基(HNO)-对自然和合成化学都是新的。根据调查结果,我们提出了由亚硝酸还原酶途径启发的C-H胺化的催化循环。这项研究强调了工程血液蛋白获得天然氮源进行可持续化学合成的潜力,并为生物催化中生物氮循环中间体的使用提供了新的视角。
    Engineered hemoproteins can selectively incorporate nitrogen from nitrene precursors like hydroxylamine, O-substituted hydroxylamines, and organic azides into organic molecules. Although iron-nitrenoids are often invoked as the reactive intermediates in these reactions, their innate reactivity and transient nature have made their characterization challenging. Here we characterize an iron-nitrosyl intermediate generated from NH2OH within a protoglobin active site that can undergo nitrogen-group transfer catalysis, using UV-vis, electron paramagnetic resonance (EPR) spectroscopy, and high-resolution electrospray ionization mass spectrometry (HR-ESI-MS) techniques. The mechanistic insights gained led to the discovery of aminating reagents─nitrite (NO2-), nitric oxide (NO), and nitroxyl (HNO)─that are new to both nature and synthetic chemistry. Based on the findings, we propose a catalytic cycle for C-H amination inspired by the nitrite reductase pathway. This study highlights the potential of engineered hemoproteins to access natural nitrogen sources for sustainable chemical synthesis and offers a new perspective on the use of biological nitrogen cycle intermediates in biocatalysis.
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  • 文章类型: Journal Article
    近年来,脉冲EPR中的DEER实验因其在细胞和缓冲液设置中的精确距离分布见解而引起了人们的兴趣。与标记样品的电子自旋Tm/T2值相关的这些测量值受到细胞环境完全质子化或氘代的影响。正如本研究所证明的那样。
    In recent years, DEER experiments in pulsed EPR have garnered interest for their precise distance distribution insights in cellular and buffer setups. These measurements linked to electron spin Tm/T2 values of the labelled sample are impacted by the cellular environment being fully protonated or deuterated, as demonstrated in the present study.
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  • 文章类型: Journal Article
    氧化铁改性金属有机骨架(MOF),Fe3O4-MOF,是一种透视药物递送剂,使磁性控制和活性羟基自由基的产生,•OH,通过Fenton反应.本文研究了含铁纳米粒子(NPs):Fe3O4-MOF及其组分-裸Fe3O4和MOF(MIL-88B)的细胞毒性和自由基活性。发光的海洋细菌发光细菌被用作模型细胞系统来监测NP的生物效应。Fe3O4-MOF和MOF的NP在很宽的浓度范围内(<10mg/L)均未表现出细胞毒性作用;而Fe3O4在>3·10-3mg/L时具有毒性。Fe3O4的NP不影响细菌生物发光酶系统;它们的毒性作用归因于细胞膜过程。使用化学发光鲁米诺测定法确定活性氧(ROS)的积分含量。细菌减轻了Fe3O4-MOF和MOF水悬浮液中过量的ROS,保持生物发光强度接近对照;这导致这些NP的低毒性。我们通过物理和化学方法-自旋捕获技术(使用电子顺磁共振波谱)和亚甲基蓝降解来估计NPs样品中•OH自由基的活性。细胞反应的物理化学解释是根据铁含量提供的,铁离子释放和·OH自由基产生。
    Metal-organic framework (MOF) modified with iron oxide, Fe3O4-MOF, is a perspective drug delivery agent, enabling magnetic control and production of active hydroxyl radicals, •OH, via the Fenton reaction. This paper studies cytotoxic and radical activities of Fe-containing nanoparticles (NPs): Fe3O4-MOF and its components - bare Fe3O4 and MOF (MIL-88B). Luminous marine bacteria Photobacteriumphosphoreum were used as a model cellular system to monitor bioeffects of the NPs. Neither the NPs of Fe3O4-MOF nor MOF showed cytotoxic effects in a wide range of concentrations (<10 mg/L); while Fe3O4 was toxic at >3·10-3 mg/L. The NPs of Fe3O4 did not affect the bacterial bioluminescence enzymatic system; their toxic effect was attributed to cellular membrane processes. The integral content of reactive oxygen species (ROS) was determined using a chemiluminescence luminol assay. Bacteria mitigated excess of ROS in water suspensions of Fe3O4-MOF and MOF, maintaining bioluminescence intensity closer to the control; this resulted in low toxicity of these NPs. We estimated the activity of •OH radicals in the NPs samples with physical and chemical methods - spin capture technology (using electron paramagnetic resonance spectroscopy) and methylene blue degradation. Physico-chemical interpretation of cellular responses is provided in terms of iron content, iron ions release and •OH radical production.
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  • 文章类型: Journal Article
    辐射剂量测定是评估由于电离辐射暴露而在人体中造成的生物损害的重要任务。电离辐射是不可见的,超出了人类自然传感器的感知,剂量测定设备/系统是其测量的最高要求。辐射剂量的回顾性测量是一项具有挑战性的任务,因为在暴露部位无法获得常规的辐射剂量。在暴露的个体或个体生物样品附近的材料可用作用于剂量测定目的的回顾性辐射传感器。环境材料,如沙子,砖块,陶瓷,砂石,石英,长石,眼镜和电子芯片已使用TL(热释光)技术进行回顾性伽马剂量(最小10cGy)测量。电子自旋共振技术已被用于人类生物样品,如牙釉质,骨头,指甲,头发,等。并报告了约20cGymin剂量测量的剂量测定。已经发现一些商业玻璃足够灵敏以使用TL技术测量100cGy量级的最小伽马剂量。对于内部回顾性剂量测定,食品中的放射性污染评估,水,其他可食用产品和环境空气是先决条件。相对于其消耗率的放射性浓度可能有助于控制内部污染和估计人体的剂量吸收。国防实验室,Jodhpur一直在广泛研究使用环境材料进行外部剂量测量的剂量测定技术,并开发了便携式污染监测系统,用于在60s的测量时间内进行50Bqkg-1至1000kBqkg-1范围内的食品和水放射性测量。最近在方法论方面的研究和发展,本文报道了在回顾性辐射剂量学中进行能力建设和自力更生的设备和系统。
    Radiation dosimetry is an important task for assessing the biological damages created in human being due to ionising radiation exposure. Ionising radiation being invisible and beyond the perception of human natural sensors, the dosimetry equipments/systems are the utmost requirement for its measurement. Retrospective measurement of radiation doses is a challenging task as conventional radiation dosemeters are not available at the exposure site. The material/s in close proximity of exposed individual or individuals\' biological samples may be used as retrospective radiation sensor for dosimetry purpose. Environment materials such as sand, bricks, ceramics, sand stones, quartz, feldspar, glasses and electronic chips have been utilised using TL (Thermoluminescence) techniques for retrospective gamma dose (min 10 cGy) measurement. Electron Spin Resonance techniques have been employed to human biological samples such as tooth enamel, bones, nails, hair, etc. and reported for dosimetry for ~20 cGy min dose measurement. Some commercial glasses have been found sensitive enough to measure the minimum gamma doses of the order of 100 cGy using TL techniques. For internal retrospective dosimetry, the radioactivity contamination assessment in food items, water, other edible product and ambient air are the prerequisites. The radioactivity concentration vis-à-vis their consumption rate may help in controlling the internal contamination and estimation of dose absorption in human body. Defence Laboratory, Jodhpur has been working extensively on the dosimetry techniques for external dose measurement using environmental material and developed portable contamination monitoring systems for food and water radioactivity measurement in the range of 50 Bq kg-1 to 1000 kBq kg-1 in 60 s measurement time. The recent research and development in the methodologies, equipments and systems undertaken towards capacity building and self-reliance in retrospective radiation dosimetry is reported in this paper.
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  • 文章类型: Journal Article
    卵清蛋白(OVA),一种对鸡胚营养至关重要的蛋白质,水合作用,和抗菌保护,与其他蛋清蛋白一起,迁移到羊水,并在胚胎发生期间被胚胎口服吸收。最近,研究表明,为了获得最佳的蛋壳质量,母鸡的饮食可以补充锰。虽然对胚胎发育至关重要,锰过量会导致神经毒性。这项研究调查了OVA是否可能参与锰水平的调节。使用电子顺磁共振(EPR)光谱研究了Mn(II)与OVA的结合。结果表明,OVA结合最多两个Mn(II)离子,亲和力稍弱的人,即使是多余的10倍,这表明它可能对Mn(II)过载具有保护作用。似乎Mn(II)的结合,或过量Mn(II)的存在,不影响OVA的三级结构,从荧光和UV/vis测量证明。与牛和人血清白蛋白的比较分析表明,它们对Mn(II)的亲和力高于OVA,很可能是由于他们本质上不同的生理作用。这些发现表明OVA在锰的运输和储存中不起作用;然而,它可能参与保护胚胎免受锰诱导的毒性。
    Ovalbumin (OVA), a protein vital for chick embryo nutrition, hydration, and antimicrobial protection, together with other egg-white proteins, migrates to the amniotic fluid and is orally absorbed by the embryo during embryogenesis. Recently, it has been shown that for optimal eggshell quality, the hen diet can be supplemented with manganese. Although essential for embryonic development, manganese in excess causes neurotoxicity. This study investigates whether OVA may be involved in the regulation of manganese levels. The binding of Mn(II) to OVA was investigated using electron paramagnetic resonance (EPR) spectroscopy. The results show that OVA binds a maximum of two Mn(II) ions, one with slightly weaker affinity, even in a 10-fold excess, suggesting it may have a protective role from Mn(II) overload. It seems that the binding of Mn(II), or the presence of excess Mn(II), does not affect OVA\'s tertiary structure, as evidenced from fluorescence and UV/vis measurements. Comparative analysis with bovine and human serum albumins revealed that they exhibit higher affinities for Mn(II) than OVA, most likely due to their essentially different physiological roles. These findings suggest that OVA does not play a role in the transport and storage of manganese; however, it may be involved in embryo protection from manganese-induced toxicity.
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  • 文章类型: Journal Article
    转录因子CooA是CRP/FNR(cAMP受体蛋白/富马酸和硝酸还原酶)超家族蛋白,其使用血红素来感测一氧化碳(CO)。CooA响应于CO结合的变构激活目前被描述为一系列离散的结构变化。没有过多考虑蛋白质动力学在DNA结合过程中的潜在作用。这项工作使用定点自旋标记电子顺磁共振波谱(SDSL-EPR)来探测具有氧化还原稳定的氮氧化物自旋标记的CooA的慢时间尺度(μs-ms)构象动力学,和红外光谱来探测CO结合血红素的环境。创建了一系列半胱氨酸取代变体,以在关键功能区域选择性标记CooA,血红素结合域,4/5循环,铰链区,和DNA结合域。在三种功能状态下比较了标记的CooA变体的EPR光谱:Fe(III)“锁定”,Fe(II)-CO“on”,Fe(II)-CO与DNA结合。我们观察到多组分EPR光谱在每个位置的变化;最值得注意的是在铰链区和DNA结合域,扩大对CooA变构机制的描述,以包括蛋白质动力学在DNA结合中的作用。IR振动频率和谱带展宽的DNA依赖性变化进一步表明,活性WT蛋白存在构象异质性,并且DNA结合改变了血红素结合CO的环境。
    The transcription factor CooA is a CRP/FNR (cAMP receptor protein/ fumarate and nitrate reductase) superfamily protein that uses heme to sense carbon monoxide (CO). Allosteric activation of CooA in response to CO binding is currently described as a series of discrete structural changes, without much consideration for the potential role of protein dynamics in the process of DNA binding. This work uses site-directed spin-label electron paramagnetic resonance spectroscopy (SDSL-EPR) to probe slow timescale (μs-ms) conformational dynamics of CooA with a redox-stable nitroxide spin label, and IR spectroscopy to probe the environment at the CO-bound heme. A series of cysteine substitution variants were created to selectively label CooA in key functional regions, the heme-binding domain, the 4/5-loop, the hinge region, and the DNA binding domain. The EPR spectra of labeled CooA variants are compared across three functional states: Fe(III) \"locked off\", Fe(II)-CO \"on\", and Fe(II)-CO bound to DNA. We observe changes in the multicomponent EPR spectra at each location; most notably in the hinge region and DNA binding domain, broadening the description of the CooA allosteric mechanism to include the role of protein dynamics in DNA binding. DNA-dependent changes in IR vibrational frequency and band broadening further suggest that there is conformational heterogeneity in the active WT protein and that DNA binding alters the environment of the heme-bound CO.
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