transmission route

传输路径
  • 文章类型: Journal Article
    陆地公共交通是城市内部和城市之间的重要纽带,如何控制COVID-19在陆地公共交通中的传播是我们日常生活中的一个关键问题。然而,关于SARS-CoV-2在陆地公共交通中的传播仍然存在许多不一致的观点和看法,这限制了我们实施有效干预措施的能力。这篇综述的目的是概述有关该流行病在陆地公共交通中的传播特征和途径的文献,以及调查影响其传播的因素,并提供可行的措施来减轻乘客的感染风险。我们通过搜索科学网获得了898篇论文,Pubmed,和世卫组织全球COVID数据库的关键词,并最终选择了45篇论文,可以解决本评论的目的。由于拥挤等特点,陆路公共交通是COVID-19的高发地区,通风不足,暴露时间长,和环境封闭。与表面接触透射和液滴喷雾透射不同,气溶胶吸入传播不仅可以在短距离内发生,而且可以在长距离内发生。通风不足是影响气溶胶远距离传播的最重要因素。其他传播因素(例如,人际距离,相对取向,和环境条件)也应注意,本文对此进行了总结。为了解决各种影响因素,必须提出切实可行的预防措施。其中,增加通风,特别是新鲜空气(即,自然通风),已证明可有效降低室内感染风险。许多预防措施也是有效的,比如扩大社交距离,避免面对面的定向,设置物理分区,消毒,避免说话,等等。随着对该流行病的研究的加强,人们已经打破了许多感知的障碍,但仍需要对陆地公共交通的监测系统和预防措施进行更全面的研究。
    Land public transport is an important link within and between cities, and how to control the transmission of COVID-19 in land public transport is a critical issue in our daily lives. However, there are still many inconsistent opinions and views about the spread of SARS-CoV-2 in land public transport, which limits our ability to implement effective interventions. The purpose of this review is to overview the literature on transmission characteristics and routes of the epidemic in land public transport, as well as to investigate factors affecting its spread and provide feasible measures to mitigate the infection risk of passengers. We obtained 898 papers by searching the Web of Science, Pubmed, and WHO global COVID database by keywords, and finally selected 45 papers that can address the purpose of this review. Land public transport is a high outbreak area for COVID-19 due to characteristics like crowding, inadequate ventilation, long exposure time, and environmental closure. Different from surface touch transmission and drop spray transmission, aerosol inhalation transmission can occur not only in short distances but also in long distances. Insufficient ventilation is the most important factor influencing long-distance aerosol transmission. Other transmission factors (e.g., interpersonal distance, relative orientation, and ambient conditions) should be noticed as well, which have been summarized in this paper. To address various influencing factors, it is essential to suggest practical and efficient preventive measures. Among these, increased ventilation, particularly the fresh air (i.e., natural ventilation), has proven to effectively reduce indoor infection risk. Many preventive measures are also effective, such as enlarging social distance, avoiding face-to-face orientation, setting up physical partitions, disinfection, avoiding talking, and so on. As research on the epidemic has intensified, people have broken down many perceived barriers, but more comprehensive studies on monitoring systems and prevention measures in land public transport are still needed.
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  • 文章类型: Journal Article
    鸟分枝杆菌亚种。人源性疾病(MAH)是引起人类和动物非结核分枝杆菌疾病的最普遍的分枝杆菌之一。值得注意的是,MAH是猪群中分枝杆菌肉芽肿性肠系膜淋巴结炎爆发的主要原因。为确定某猪场MAH的精确感染源,阐明猪之间的流行病学关系,人类和环境MAH谱系,我们从日本饲养的猪中收集了50株MAH分离株,并确定了30株分离株的基因组序列草案。可变数量的串联重复分析显示,日本大多数猪MAH分离株与北美密切相关,欧洲和俄罗斯的人类隔离,但不与东亚人类及其居住环境隔离。历史重组分析表明,大多数猪分离株可分为SC2/4和SC3,其中含有从猪中分离的MAH,欧洲人类和环境隔离物。SC2/4中的一半分离株与东亚人类分离的MAH谱系发生了许多重组事件。令我们惊讶的是,四个分离株属于全球MAH种群中的一个新谱系(SC5)。SC5的成员在基因组中几乎没有谱系间重组的足迹,携带了80个独特的基因,其中大多数位于谱系特异性基因组岛上。利用独特的遗传特征,我们能够通过其宿主猪追踪推定的传播途径。一起,除了局部适应外,我们还阐明了MAH的物种特异性的可能性。我们的结果强调了MAH的两条传播途径,一种是来自环境的养猪场,另一种是通过养猪运动。此外,我们的研究还警告说,MAH在猪中的进化受到来自患者及其居住环境的MAH的影响,即使MAH在遗传上是不同的。
    Mycobacterium avium subsp. hominissuis (MAH) is one of the most prevalent mycobacteria causing non-tuberculous mycobacterial disease in humans and animals. Of note, MAH is a major cause of mycobacterial granulomatous mesenteric lymphadenitis outbreaks in pig populations. To determine the precise source of infection of MAH in a pig farm and to clarify the epidemiological relationship among pig, human and environmental MAH lineages, we collected 50 MAH isolates from pigs reared in Japan and determined draft genome sequences of 30 isolates. A variable number of tandem repeat analysis revealed that most pig MAH isolates in Japan were closely related to North American, European and Russian human isolates but not to those from East Asian human and their residential environments. Historical recombination analysis revealed that most pig isolates could be classified into SC2/4 and SC3, which contain MAH isolated from pig, European human and environmental isolates. Half of the isolates in SC2/4 had many recombination events with MAH lineages isolated from humans in East Asia. To our surprise, four isolates belonged to a new lineage (SC5) in the global MAH population. Members of SC5 had few footprints of inter-lineage recombination in the genome, and carried 80 unique genes, most of which were located on lineage specific-genomic islands. Using unique genetic features, we were able to trace the putative transmission route via their host pigs. Together, we clarify the possibility of species-specificity of MAH in addition to local adaptation. Our results highlight two transmission routes of MAH, one exposure on pig farms from the environment and the other via pig movement. Moreover, our study also warns that the evolution of MAH in pigs is influenced by MAH from patients and their residential environments, even if the MAH are genetically distinct.
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  • 文章类型: Meta-Analysis
    这项研究的目的是评估严重急性呼吸道综合症冠状病毒2(SARS-CoV-2)的索引病例中坐在两排之内和之外的飞机乘客的感染风险,甲型H1N1流感病毒pdm09,和SARS-CoV-1.在PubMed数据库中搜索了包含有关SARS-CoV-2,甲型H1N1流感pdm09病毒的航空旅行相关传播信息的文章,和SARS-CoV-1感染。我们对感染数据进行了荟萃分析。在可以计算攻击率的八次飞行中,机上SARS-CoV-2的发病率为2.6%至16.1%。在SARS-CoV-2暴发中,坐在两排指标病例之内和之外的乘客的感染风险比为5.64(95%置信区间(CI):1.94-16.40),4.26(95%CI:1.08-16.81)在甲型流感(H1N1)pdm09病毒暴发中,和SARS-CoV-1疫情中的1.91(95%CI:0.80-4.55)。此外,我们发现SARS-CoV-2在乘客戴口罩和不戴口罩的航班中的发作率没有显着差异(p=0.22)。与SARS-CoV-1相比,机上SARS-CoV-2暴发的空间分布更类似于甲型(H1N1)pdm09流感病毒暴发。鉴于SARS-CoV-2传播中无症状或症状前感染的比例很高,我们假设邻近传输,特别是短程空中航线,可能在SARS-CoV-2的飞行传播中起重要作用。
    The aim of this study is to evaluate the infection risk of aircraft passengers seated within and beyond two rows of the index case(s) of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), influenza A(H1N1)pdm09 virus, and SARS-CoV-1. PubMed databases were searched for articles containing information on air travel-related transmission of SARS-CoV-2, influenza A(H1N1)pdm09 virus, and SARS-CoV-1 infections. We performed a meta-analysis of inflight infection data. In the eight flights where the attack rate could be calculated, the inflight SARS-CoV-2 attack rates ranged from 2.6% to 16.1%. The risk ratios of infection for passengers seated within and outside the two rows of the index cases were 5.64 (95% confidence interval (CI):1.94-16.40) in SARS-CoV-2 outbreaks, 4.26 (95% CI:1.08-16.81) in the influenza A(H1N1)pdm09 virus outbreaks, and 1.91 (95% CI:0.80-4.55) in SARS-CoV-1 outbreaks. Furthermore, we found no significant difference between the attack rates of SARS-CoV-2 in flights where the passengers were wearing masks and those where they were not (p = 0.22). The spatial distribution of inflight SARS-CoV-2 outbreaks was more similar to that of the influenza A(H1N1)pdm09 virus outbreaks than to that of SARS-CoV-1. Given the high proportion of asymptomatic or pre-symptomatic infection in SARS-CoV-2 transmission, we hypothesised that the proximity transmission, especially short-range airborne route, might play an important role in the inflight SARS-CoV-2 transmission.
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  • 文章类型: Journal Article
    目的:该研究旨在确定胡志明市(HCMC)学生中幽门螺杆菌感染的患病率及其相关危险因素。方法:采用多阶段抽样方法,对1476名6~15岁的小学生进行横断面研究。使用粪便抗原测试评估感染状态。问卷被用来获得社会人口统计,行为,和环境因素。采用Logistic回归分析评估与感染相关的可能因素。结果:在分析中纳入的1,409名儿童中,男性占49.2%,Kinh族占95.8%。大约43.5%的父母完成了大学或大学学业。幽门螺杆菌的总体患病率为87.7%。厕所后经常用肥皂洗手,厕所后只使用水清洗,拥挤的生活区,更大的家庭规模,和年龄较小是幽门螺杆菌患病率增加的独立原因.结论:幽门螺杆菌感染在HCMC中高度流行,并与不良的卫生习惯有关,拥挤的生活区,更大的家庭规模,和年轻的年龄。这些发现强调了粪便-口腔途径的重要性以及拥挤的生活条件归因于幽门螺杆菌在HCMC中的传播。因此,预防计划应以卫生习惯教育为重点,面向那些生活在拥挤环境中的人。
    Objectives: The study aimed to identify prevalence of H. pylori infection and associated risk factors among pupils of Ho Chi Minh city (HCMC). Methods: A total of 1,476 pupils aged 6-15 years were enrolled in this cross-sectional study using multiple-stage sampling method. Infection status was assessed using stool antigen-test. A questionnaire was used to obtain socio-demographic, behavioral, and environmental factors. Logistic regression was performed to assess possible factors related to the infection. Results: Of the 1,409 children included in the analysis, 49.2% were male and 95.8% were of Kinh ethnicity. About 43.5% of parents completed college or university. The overall prevalence of H. pylori was 87.7%. Infrequency of handwashing with soap after toilet, the use of only water to clean after toilet, crowded living areas, larger family size, and younger age were independently contributing to an increased prevalence of H. pylori. Conclusion: H. pylori infection is highly prevalent in HCMC, and is associated with poor hygienic practices, crowded living areas, larger family size, and younger age. These findings highlight the importance of fecal-oral route and the attribution of crowded living conditions to the spreading of H. pylori in HCMC. Therefore, preventive programs should be set up with a focus on education of hygiene practices, and oriented to those living in crowded conditions.
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  • 文章类型: Journal Article
    我们在肯尼亚的Bombali病毒阳性和阴性Mops尖锐湿疣蝙蝠的肺部发现了类似的轻度血管周围炎症,表明病毒耐受性良好。我们的发现表明,尖锐湿疣蝙蝠可能是Bombali病毒的宿主。加强对这些蝙蝠的监测对于减少潜在的病毒传播至关重要。
    We found similar mild perivascular inflammation in lungs of Bombali virus-positive and -negative Mops condylurus bats in Kenya, indicating the virus is well-tolerated. Our findings indicate M. condylurus bats may be a reservoir host for Bombali virus. Increased surveillance of these bats will be important to reduce potential virus spread.
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  • 文章类型: Systematic Review
    根据2006-2012年欧洲监测数据,医疗保健相关传播是第二常见的乙型肝炎(HBV)和丙型肝炎(HCV)传播途径,但是数据质量和完整性问题阻碍了对这一重要问题的全面描述。我们对欧盟(EU)和欧洲经济区(EEA)国家和英国的HBV或HCV医疗保健相关传播的已发表文献进行了系统评价,以补充监测数据并确定高风险设置。我们搜索了2006年1月至2021年9月期间的PubMed和Embase数据库和灰色文献,以获取报告2000年后欧盟/欧洲经济区和英国与医疗保健环境或程序相关的传播事件的出版物。我们收集了这个国家的数据,患者数量,设置类型和传输路径。在来自16个国家的65份出版物中,确定了43例HBV和48例HCV事件,导致442例新感染患者。大多数事件来自意大利(7HBV和12HCV),德国(8HBV和5HCV)和英国(8HBV和5HCV)。在一个事件中,从单一来源感染的患者人数为1至53。发现了五次大规模爆发,超过20例,包括波兰的两个和比利时的一个,匈牙利和斯洛伐克。大多数传播事件是通过输血或透析单位发生的。然而,在CT/MRI扫描单元等看似低风险的环境中出现了一些暴发.在30%的纳入研究中报告了未能充分遵循感染预防控制(IPC)预防措施。在欧盟/欧洲经济区国家的一系列社区和医院环境中,乙型肝炎和丙型肝炎的医疗保健相关传播继续发生,并经常导致大规模爆发。尽管由于报告不足,情况的真实程度无法完全确定。应在所有医疗保健环境中实施严格的IPC预防措施,并定期进行审核,和监测系统得到加强和标准化,以便全面和一致地报告整个欧盟的肝炎医院传播。
    Healthcare-associated transmission was the second most common hepatitis B (HBV) and hepatitis C (HCV) transmission route according to 2006-2012 European surveillance data, but data quality and completeness issues hinder comprehensive characterisation of this important issue. We carried out a systematic review of published literature on healthcare-associated transmission of HBV or HCV in European Union (EU) and European Economic Area (EEA) countries and the United Kingdom to complement surveillance data and identify higher-risk settings. We searched the PubMed and Embase databases and grey literature over the period January 2006 to September 2021, for publications reporting transmission events after 2000 in the EU/EEA and UK related to a healthcare setting or procedure. We collected data on the country, number of patients, setting type and route of transmission. In 65 publications from 16 countries, 43 HBV and 48 HCV events were identified resulting in 442 newly infected patients. Most events were reported from Italy (7 HBV and 12 HCV), Germany (8 HBV and 5 HCV) and the United Kingdom (8 HBV and 5 HCV). The number of patients infected from a single source within an event ranged from 1 to 53. Five large outbreaks of over 20 cases were identified, including two in Poland and one each in Belgium, Hungary and Slovakia. The majority of transmission events occurred through blood transfusions or in dialysis units. However, there were a number of outbreaks in seemingly low risk settings such as CT/MRI scanning units. A failure to adequately follow infection prevention control (IPC) precautions was reported in 30% of included studies. Healthcare-associated transmission of hepatitis B and C continues to occur in a range of community and hospital settings across EU/EEA countries and often results in large outbreaks, although the true extent of the situation cannot be fully determined due to under-reporting. Strict IPC precautions should be implemented across all healthcare settings and regularly audited, and surveillance systems strengthened and standardised to allow for comprehensive and consistent reporting of nosocomial transmission of hepatitis across the EU.
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  • 文章类型: Journal Article
    暂无摘要。
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  • 文章类型: Journal Article
    鼠Kobuvirus(MuKV)是Kobuvirus属的一种新型小核糖核酸病毒,并于2011年在美国的鼠类啮齿动物粪便中首次发现。关于MuKV的传输路由的信息有限。因此,我们进行了一项研究,以调查粪便中的病毒检测率,血清,喉咙,和鼠啮齿动物的肺组织样本.
    总共413个粪便样本,385个肺样本,269个咽喉拭子样本,并从413只小鼠啮齿动物(Rattusnorvegicus,Rattustanezumi,和Rattusrattus)在深圳市区捕获。通过RT-PCR检测科布病毒。只有粪便样本呈阳性,褐家鼠的患病率为34.9%,白家鼠的患病率为29.4%。基于部分3D和完整VP1序列区域的系统发育分析表明,获得的所有MuKV序列均属于AichirvirusA,在基因上与中国报道的其他MuKV密切相关,匈牙利,和美国。获得了28个全长MuKV序列。从两个物种(SZ59和SZ171)中随机选择的两个序列的系统发育分析表明,它们彼此之间具有非常高的核苷酸和氨基酸同一性(94.0和99.3%,分别),与人类Kobuvirus的比较显示氨基酸同一性值为〜80%。此外,污水衍生序列与本研究中确定的大鼠衍生序列具有高度相似性,相应的核苷酸和氨基酸同一性值从86.5和90.7%到87.2和91.1%。
    本研究的结果提供了鼠科布病毒通过粪-口途径传播的证据。
    Murine Kobuvirus (MuKV) is a novel picornavirus of the genus Kobuvirus, and was first identified in the feces of murine rodents in the USA in 2011. There is limited information on the transmission route of MuKV. Thus, we conducted a study to investigate virus detection rates in fecal, serum, throat, and lung tissue samples from murine rodents.
    A total of 413 fecal samples, 385 lung samples, 269 throat swab samples, and 183 serum samples were collected from 413 murine rodents (Rattus norvegicus, Rattus tanezumi, and Rattus rattus) captured in urban Shenzhen. Kobuviruses were detected via RT-PCR. Only fecal samples were positive, with prevalence rates of 34.9% in Rattus norvegicus and 29.4% in Rattus tanezumi. Phylogenetic analysis based on partial 3D and complete VP1 sequence regions indicated that all of the MuKV sequences obtained belonged to Aichivirus A, and were genetically closely related to other MuKVs reported in China, Hungary, and the USA. Twenty-eight full-length MuKV sequences were acquired. Phylogenetic analysis of two sequences randomly selected from the two species (SZ59 and SZ171) indicated that they shared very high nucleotide and amino acid identity with one another (94.0 and 99.3%, respectively), and comparison with human Kobuvirus revealed amino acid identity values of ~80%. Additionally, a sewage-derived sequence shared high similarity with the rat-derived sequences identified in this study, with respective nucleotide and amino acid identity values from 86.5 and 90.7% to 87.2 and 91.1%.
    The results of the current study provide evidence that murine Kobuvirus is transmitted via the fecal-oral route.
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  • 文章类型: Journal Article
    Personal protective behaviors of healthcare workers (HCWs) and dynamic changes in them are known to play a major role in the hospital transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In this study, 1,499 HCWs in Chinese hospitals completed an online survey about their knowledge on SARS-CoV-2 transmission and their personal protective behaviors before and after coronavirus disease 2019 (COVID-19) vaccination. Of all the respondents, 89% were vaccinated at the time of the survey and 96% believed that the vaccine was effective or highly effective. Further, 88% of the vaccinated HCWs expressed that they would get revaccinated if the vaccination failed. Compared with HCWs with a lower education level, those with a higher education level had less fear of being infected with SARS-CoV-2 and reported a lower negative impact of the pandemic on how they treated patients. Physicians and nurses were willing to believe that short-range airborne and long-range fomite are possible transmission routes. HCWs with a higher education level had a better knowledge of COVID-19 but worse personal protective behaviors. The fact that HCWs with a longer work experience had worse personal protective behaviors showed that HCWs gradually relax their personal protective behaviors over time. Moreover, vaccination reduced the negative effects of the COVID-19 pandemic on how the HCWs treated patients. Importantly, the survey revealed that after vaccination, HCWs in China did not relax their personal protective behaviors, and it may bring a low potential risk for following waves of variant virus (e.g., delta).
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  • 文章类型: Journal Article
    Neospora caninum is an apicomplexan parasite that can cause abortions and perinatal mortality in sheep. Although ovine neosporosis has been described worldwide, there is a lack of information about the relationship between N. caninum serostatus and the reproductive performance. In this study, we described the infection dynamics in a dairy sheep flock with an abortion rate up to 25% and a N. caninum seroprevalence of 32%. Abortions were recorded in 36% and 9% of seropositive and seronegative sheep, respectively. Seropositive sheep were more likely to abort twice (OR = 4.44) or three or more times (OR = 10.13) than seronegative sheep. Endogenous transplacental transmission was the main route of transmission since 86% of seropositive sheep had seropositive offspring. Within dams that had any abortion, seropositive sheep were more likely than seronegative ones to have female descendants that aborted (OR = 8.12). The slight increase in seropositivity with the age, the low percentage of animals with postnatal seroconversion or with low avidity antibodies, and the seropositivity of one flock dog, indicated that horizontal transmission might have some relevance in this flock. A control programme based on selective culling of seropositive sheep and replacement with seronegative animals was effective in reducing the abortion rate to 7.2%.
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