intermediate filaments

中间长丝
  • 文章类型: Journal Article
    中间丝蛋白波形蛋白在细胞骨架相互作用和动力学中起重要作用,机械传感和细胞应激反应。在病理学上,波形蛋白是肿瘤发生的关键角色,纤维化和感染。波形蛋白丝经历独特而通用的重组,并表现为氧化还原传感器。波形蛋白单体具有中心α-螺旋杆状结构域,其侧翼为N-和C-末端低复杂度结构域。这类结构域之间的相互作用在相分离的生物分子缩合物的形成中起着重要的作用。这反过来对细胞成分的组织至关重要。这里我们展示了几种氧化剂,包括过氧化氢和二酰胺,引起波形蛋白丝重塑成小颗粒。二酰胺引起的氧化应激诱导细丝快速解离成圆形,活动点,这需要单个波形蛋白半胱氨酸残基的存在,C328.这种效应是可逆的,和细丝重组可以在氧化剂去除的几分钟内发生。二酰胺引发的波形蛋白液滴在光漂白后恢复荧光。此外,表达差异标记波形蛋白的细胞融合允许检测两个标记的阳性点,表明波形蛋白点在细胞融合后合并。脂肪醇1,6-己二醇,已知会改变低复杂度域之间的交互,容易溶解低浓度的二酰胺引发的波形蛋白点,以C328依赖的方式,阻碍了重新组装。一起来看,这些结果表明,波形蛋白氧化促进快速和可逆的细丝重塑为生物分子缩合样结构,并提供其调节相分离的主要证据。此外,我们假设,细丝到液滴的过渡可以起到保护作用,防止波形蛋白网络的不可逆损害由氧化应激。
    The intermediate filament protein vimentin performs an essential role in cytoskeletal interplay and dynamics, mechanosensing and cellular stress responses. In pathology, vimentin is a key player in tumorigenesis, fibrosis and infection. Vimentin filaments undergo distinct and versatile reorganizations, and behave as redox sensors. The vimentin monomer possesses a central α-helical rod domain flanked by N- and C-terminal low complexity domains. Interactions between this type of domains play an important function in the formation of phase-separated biomolecular condensates, which in turn are critical for the organization of cellular components. Here we show that several oxidants, including hydrogen peroxide and diamide, elicit the remodeling of vimentin filaments into small particles. Oxidative stress elicited by diamide induces a fast dissociation of filaments into circular, motile dots, which requires the presence of the single vimentin cysteine residue, C328. This effect is reversible, and filament reassembly can occur within minutes of oxidant removal. Diamide-elicited vimentin droplets recover fluorescence after photobleaching. Moreover, fusion of cells expressing differentially tagged vimentin allows the detection of dots positive for both tags, indicating that vimentin dots merge upon cell fusion. The aliphatic alcohol 1,6-hexanediol, known to alter interactions between low complexity domains, readily dissolves diamide-elicited vimentin dots at low concentrations, in a C328 dependent manner, and hampers reassembly. Taken together, these results indicate that vimentin oxidation promotes a fast and reversible filament remodeling into biomolecular condensate-like structures, and provide primary evidence of its regulated phase separation. Moreover, we hypothesize that filament to droplet transition could play a protective role against irreversible damage of the vimentin network by oxidative stress.
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  • 文章类型: Journal Article
    真核细胞通过保守的分子桥将核骨架连接到细胞骨架上,称为LINC复合体。LINC复合物的核心包含SUN结构域和KASH结构域蛋白,其在核包膜腔内直接缔合。链内和链间二硫键,随着KASH域蛋白质相互作用,两者都有助于脊椎动物SUN结构域蛋白的三级和四级结构。这些键的重要性以及PDIs(蛋白质二硫键异构酶)在LINC复合物生物学中的作用尚不清楚。还原性和非还原性SDS-PAGE分析显示SUN2同二聚体在非致瘤性乳腺上皮MCF10A细胞中普遍存在,但不在浸润性三阴性乳腺癌MDA-MB-231细胞系中。此外,超分辨率显微镜显示MCF10A的SUN2染色改变,但不是在MDA-MB-231细胞核中,在还原剂暴露时。虽然PDIA1水平在两种细胞系中相似,MDA-MB-231细胞PDI活性的药理学抑制导致SUN结构域蛋白下调,以及Nesprin-2从细胞核的位移。这种抑制也引起核周细胞骨架结构和层板蛋白下调的变化,并在空间限制性的体外环境中增加了PDI抑制的MDA-MB-231细胞的侵袭力,与未处理的细胞相比。这些结果强调了PDIs在调节LINC复杂生物学中的关键作用,蜂窝架构,生物力学,和入侵。
    Eukaryotic cells tether the nucleoskeleton to the cytoskeleton via a conserved molecular bridge, called the LINC complex. The core of the LINC complex comprises SUN-domain and KASH-domain proteins that directly associate within the nuclear envelope lumen. Intra- and inter-chain disulphide bonds, along with KASH-domain protein interactions, both contribute to the tertiary and quaternary structure of vertebrate SUN-domain proteins. The significance of these bonds and the role of PDIs (protein disulphide isomerases) in LINC complex biology remains unclear. Reducing and non-reducing SDS-PAGE analyses revealed a prevalence of SUN2 homodimers in non-tumorigenic breast epithelia MCF10A cells, but not in the invasive triple-negative breast cancer MDA-MB-231 cell line. Furthermore, super-resolution microscopy revealed SUN2 staining alterations in MCF10A, but not in MDA-MB-231 nuclei, upon reducing agent exposure. While PDIA1 levels were similar in both cell lines, pharmacological inhibition of PDI activity in MDA-MB-231 cells led to SUN-domain protein down-regulation, as well as Nesprin-2 displacement from the nucleus. This inhibition also caused changes in perinuclear cytoskeletal architecture and lamin downregulation, and increased the invasiveness of PDI-inhibited MDA-MB-231 cells in space-restrictive in vitro environments, compared to untreated cells. These results emphasise the key roles of PDIs in regulating LINC complex biology, cellular architecture, biomechanics, and invasion.
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  • 文章类型: Journal Article
    波形蛋白中间丝(IF)的复杂组装过程,真核细胞骨架的关键成分,尚未阐明。在这项工作中,我们研究了从可溶性四聚体波形蛋白单元到成熟11-nm管状细丝的转变,解决了对IF装配理解的重大差距。通过理论建模和实验数据分析相结合,我们提出了一个新的组装序列,强调螺旋转弯和可溶性四聚体填充间隙的作用。我们的发现揭示了波形蛋白的独特结构动力学,并为中间丝形成的一般原理提出了更广泛的含义。
    The intricate assembly process of vimentin intermediate filaments (IFs), key components of the eukaryotic cytoskeleton, has yet to be elucidated. In this work, we investigated the transition from soluble tetrameric vimentin units to mature 11-nm tubular filaments, addressing a significant gap in the understanding of IF assembly. Through a combination of theoretical modeling and analysis of experimental data, we propose a novel assembly sequence, emphasizing the role of helical turns and gap filling by soluble tetramers. Our findings shed light on the unique structural dynamics of vimentin and suggest broader implications for the general principles of IF formation.
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  • 文章类型: Journal Article
    中间丝(IF)是细胞骨架的组成部分,为细胞提供了组织特异性的机械特性,并参与了过多的细胞过程。不幸的是,由于其复杂的架构,IFs完整分子的3D结构仍未解决。尽管大多数杆域结构已通过晶体学分析得到揭示,侧翼的头部和尾部域仍然大部分是未知的。直到最近,研究才揭示了IF的头部或尾部域,揭示了IF组装过程中的某些二级结构和构象变化。因此,更深入地了解它们的结构可以提供对它们功能的见解。
    Intermediate filaments (IFs) are integral components of the cytoskeleton which provide cells with tissue-specific mechanical properties and are involved in a plethora of cellular processes. Unfortunately, due to their intricate architecture, the 3D structure of the complete molecule of IFs has remained unresolved. Even though most of the rod domain structure has been revealed by means of crystallographic analyses, the flanked head and tail domains are still mostly unknown. Only recently have studies shed light on head or tail domains of IFs, revealing certainsecondary structures and conformational changes during IF assembly. Thus, a deeper understanding of their structure could provide insights into their function.
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  • 文章类型: Journal Article
    背景:神经丝蛋白在肌萎缩侧索硬化症(ALS)中被改变。这项研究的目的是评估ALS中神经丝的诊断和预后效用。
    方法:在电子数据库中进行了研究(PubMed/MEDLINE,Embase,WebofScience,和CochraneCENTRAL)从开始到2023年8月17日,并研究了ALS中的神经丝光(NfL)或磷酸化神经丝重链(pNfH)。研究设计,入学标准,神经丝浓度,测试精度,脑脊液(CSF)中的神经丝与血液之间的关系,并记录临床结果。协议在PROSPERO注册,CRD42022376939。
    结果:纳入了60项研究,8801名参与者。在CSF中测量的NfL和pNfH在区分ALS与疾病模拟物方面均显示出高灵敏度和特异性。在CSF中测量的NfL和pNfH与它们在血液(血浆或血清)中的相应水平相关;然而,CSFNfL与血液NfL之间有更强的相关性。在血液中测量的NfL在区分ALS与对照方面表现出高灵敏度和特异性。血液或CSF中测得的更高水平的NfL和pNfH与ALS功能评定量表修订评分评估的更严重的症状相关,并且疾病进展速度更快;然而,只有血液NfL水平与较短的生存期相关。
    结论:在CSF或血液中测量的NfL和pNfH均显示出较高的诊断效用,并与ALS功能评分和疾病进展相关,虽然CSFNfL与血液(血浆或血清)密切相关,也与生存有关,支持其在临床诊断和预后中的使用。未来的工作必须以标准化的生物样本收集方法和分析平台的前瞻性方式进行,进一步改进用于定量血液中pNfH的免疫测定,以及ALS光谱和对照的截止值的识别。
    Neurofilament proteins have been implicated to be altered in amyotrophic lateral sclerosis (ALS). The objectives of this study were to assess the diagnostic and prognostic utility of neurofilaments in ALS.
    Studies were conducted in electronic databases (PubMed/MEDLINE, Embase, Web of Science, and Cochrane CENTRAL) from inception to 17 August 2023, and investigated neurofilament light (NfL) or phosphorylated neurofilament heavy chain (pNfH) in ALS. The study design, enrolment criteria, neurofilament concentrations, test accuracy, relationship between neurofilaments in cerebrospinal fluid (CSF) and blood, and clinical outcome were recorded. The protocol was registered with PROSPERO, CRD42022376939.
    Sixty studies with 8801 participants were included. Both NfL and pNfH measured in CSF showed high sensitivity and specificity in distinguishing ALS from disease mimics. Both NfL and pNfH measured in CSF correlated with their corresponding levels in blood (plasma or serum); however, there were stronger correlations between CSF NfL and blood NfL. NfL measured in blood exhibited high sensitivity and specificity in distinguishing ALS from controls. Both higher levels of NfL and pNfH either measured in blood or CSF were correlated with more severe symptoms as assessed by the ALS Functional Rating Scale Revised score and with a faster disease progression rate; however, only blood NfL levels were associated with shorter survival.
    Both NfL and pNfH measured in CSF or blood show high diagnostic utility and association with ALS functional scores and disease progression, while CSF NfL correlates strongly with blood (either plasma or serum) and is also associated with survival, supporting its use in clinical diagnostics and prognosis. Future work must be conducted in a prospective manner with standardized bio-specimen collection methods and analytical platforms, further improvement in immunoassays for quantification of pNfH in blood, and the identification of cut-offs across the ALS spectrum and controls.
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  • 文章类型: Journal Article
    探讨血清神经丝轻链(NfL)水平与血清神经丝轻链(NfL)水平的关系,炎性细胞因子,和认知功能,以评估其在早期发现轻度认知障碍(MCI)中的效用。我们进行了一项横断面研究,涉及157名55岁及以上的社区居民,分类为健康对照,MCI和可能的阿尔茨海默病(AD)。血清NfL水平,炎性细胞因子,采用酶联免疫吸附试验(ELISA)检测AD病理指标。分析这些生物标志物与认知功能的相关性,使用受试者工作特征(ROC)曲线分析评估认知评估量表和血清生物标志物浓度的诊断性能。与健康对照组相比,MCI和可能的AD组的血清NfL水平显着升高。血清NfL与炎症因子IL-1β呈正相关,IL-6和Aβ40。血清NfL与p-tau217和波士顿命名测试的结合显着提高了MCI的预测准确性。然而,血清NfL与炎症标志物的结合并不能提高MCI预测的准确性。血清NfL升高与认知障碍和炎症标志物相关,提示其作为MCI检测的外周血清生物标志物的潜力。血清NfL与p-tau217和认知测试的组合可以提供更准确的MCI预测,为AD治疗策略提供新的见解。
    To investigate the association between serum neurofilament light chain (NfL) levels, inflammatory cytokines, and cognitive function to assess their utility in the early detection of mild cognitive impairment (MCI). We conducted a cross-sectional study involving 157 community-dwelling individuals aged 55 years and above, categorized into healthy controls, MCI, and probable Alzheimer\'s disease (AD). Serum levels of NfL, inflammatory cytokines, and AD pathology markers were measured using enzyme-linked immunosorbent assay (ELISA). Correlations between these biomarkers and cognitive function were analyzed, and the diagnostic performance of the cognitive assessment scales and serum biomarker concentrations was evaluated using receiver operating characteristic (ROC) curve analysis. Serum NfL levels were significantly elevated in MCI and probable AD groups compared to healthy controls. Positive correlations were found between serum NfL and inflammatory cytokines IL-1β, IL-6, and Aβ40. Combining serum NfL with p-tau217 and the Boston Naming Test significantly enhanced the predictive accuracy for MCI. However, combining serum NfL with inflammatory markers did not improve MCI prediction accuracy. Elevated serum NfL is associated with cognitive impairment and inflammatory markers, suggesting its potential as a peripheral serum biomarker for MCI detection. The combination of serum NfL with p-tau217 and cognitive tests could offer a more accurate prediction of MCI, providing new insights for AD treatment strategies.
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  • 文章类型: Journal Article
    中间丝(IF)是细胞骨架的组成部分。它们为细胞提供组织特异性机械特性,并参与许多细胞过程。由于其复杂的架构,IFs的3D结构仍然难以捉摸。在这里,我们使用低温聚焦离子束铣削,冷冻电子显微镜和层析成像获得波形蛋白IF(VIF)的3D结构。VIF组装成一个模块化的,横截面有40个α螺旋的交织和柔性螺旋结构,组织成五个原纤维。令人惊讶的是,内在无序的头部结构域在VIF的内腔中形成纤维,而内在无序的尾巴在原纤维之间形成横向连接。我们的发现证明了低序列复杂性的蛋白质结构域如何补充折叠良好的蛋白质结构域,以构建具有惊人机械强度和可拉伸性的生物聚合物。
    Intermediate filaments (IFs) are integral components of the cytoskeleton. They provide cells with tissue-specific mechanical properties and are involved in numerous cellular processes. Due to their intricate architecture, a 3D structure of IFs has remained elusive. Here we use cryo-focused ion-beam milling, cryo-electron microscopy and tomography to obtain a 3D structure of vimentin IFs (VIFs). VIFs assemble into a modular, intertwined and flexible helical structure of 40 α-helices in cross-section, organized into five protofibrils. Surprisingly, the intrinsically disordered head domains form a fiber in the lumen of VIFs, while the intrinsically disordered tails form lateral connections between the protofibrils. Our findings demonstrate how protein domains of low sequence complexity can complement well-folded protein domains to construct a biopolymer with striking mechanical strength and stretchability.
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  • 文章类型: Journal Article
    背景:随着全球老龄化负担的增加,认知障碍是一个日益严重的问题。患有重度抑郁症(MDD)的老年人患痴呆症的风险更高。神经丝轻链(NfL)已被证明是神经退行性疾病的潜在生物标志物,包括痴呆症.我们的目的是调查老年MDD患者认知缺陷与NfL水平之间的关系。
    方法:在这项横断面研究中,我们纳入了39例MDD患者和15例轻度神经认知障碍或重度神经认知障碍患者,阿尔茨海默氏症的类型,作为控制,来自三级精神病医院.两组年龄均在65岁以上,并具有匹配的迷你精神状态检查(MMSE)评分。人口统计数据,临床变量,并获得血浆NfL水平。我们根据他们的认知概况使用聚类分析,并估计了血浆NfL水平与每个认知领域之间的相关性。
    结果:在MDD组中,与对照组相比,参与者的家庭精神病史和当前饮酒习惯发生率较高.神经认知障碍的对照组显示总MMSE评分明显较低,血浆NfL水平较高。部分MDD患者的认知缺陷与神经认知障碍(A组)聚集在一起。在A组中,调整年龄后,MMSE总分(r=-0.58277,p=0.0287)和理解域(r=-0.71717,p=0.0039)与NfL水平呈负相关,而在另一组中未观察到关联。
    结论:我们注意到在聚集有神经退行性疾病的MDD患者中,NfL水平与认知之间呈负相关,阿尔茨海默氏症的类型。NfL可能是一个有希望的候选生物标志物,以预测MDD患者的亚型发展为认知下降。需要进一步的纵向研究和MDD聚类分析来验证我们的发现的临床意义。
    BACKGROUND: Cognitive impairment is a growing problem with increasing burden in global aging. Older adults with major depressive disorder (MDD) have higher risk of dementia. Neurofilament light chain (NfL) has been proven as a potential biomarker in neurodegenerative disease, including dementia. We aimed to investigate the association between cognitive deficits and NfL levels in older adults with MDD.
    METHODS: In this cross-sectional study, we enrolled 39 MDD patients and 15 individuals with mild neurocognitive disorder or major neurocognitive disorder, Alzheimer\'s type, as controls, from a tertiary psychiatric hospital. Both groups were over age 65 and with matched Mini-Mental State Examination (MMSE) score. Demographic data, clinical variables, and plasma NfL levels were obtained. We used cluster analysis according to their cognitive profile and estimated the correlation between plasma NfL levels and each cognitive domain.
    RESULTS: In the MDD group, participants had higher rate of family psychiatry history and current alcohol use habit compared with controls. Control group of neurocognitive disorders showed significantly lower score in total MMSE and higher plasma NfL levels. Part of the MDD patients presented cognitive deficits clustered with that of neurocognitive disorders (cluster A). In cluster A, the total MMSE score (r=-0.58277, p=0.0287) and the comprehension domain (r=-0.71717, p=0.0039) were negatively correlated to NfL levels after adjusting for age, while the associations had not been observed in the other cluster.
    CONCLUSIONS: We noted the negative correlation between NfL levels and cognition in MDD patients clustered with neurodegenerative disorder, Alzheimer\'s type. NfL could be a promising candidate as a biomarker to predict subtype of patients in MDD to develop cognitive decline. Further longitudinal studies and within MDD cluster analysis are required to validate our findings for clinical implications.
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  • 文章类型: Systematic Review
    周围性和自主神经病变是系统性淀粉样变性的常见疾病表现。神经丝轻链(NfL),神经元特异性生物标志物,神经元损伤后释放到血液和脑脊液中。需要一种用于多发性神经病的早期和敏感的血液生物标志物,这篇系统综述概述了NfL在神经病变早期检测中的价值,中枢神经系统受累,监测神经病变的进展,和治疗效果的系统性淀粉样变性。在PubMed中进行文献检索,Embase,和WebofScience于2024年2月14日进行了研究,以调查系统性淀粉样变性和甲状腺素运载蛋白基因变异(TTRv)携带者的NfL水平。仅包括包含原始数据的研究。包括13篇全文文章和5篇摘要,描述了1604名参与者:298名对照和1306名TTRv携带者或有或没有多发性神经病的患者。与健康对照和无症状携带者相比,多发性神经病患者的NfL水平更高。疾病发作以NfL水平上升为标志。在启动转甲状腺素蛋白基因沉默子治疗后,NfL水平下降,并在较长时间内保持稳定。NfL不是结果生物标志物,而是系统性淀粉样变性神经病变的早期和敏感的疾病过程生物标志物。因此,NfL有可能用于神经病的早期检测,监测治疗效果,监测系统性淀粉样变性患者的疾病进展。
    Peripheral and autonomic neuropathy are common disease manifestations in systemic amyloidosis. The neurofilament light chain (NfL), a neuron-specific biomarker, is released into the blood and cerebrospinal fluid after neuronal damage. There is a need for an early and sensitive blood biomarker for polyneuropathy, and this systematic review provides an overview on the value of NfL in the early detection of neuropathy, central nervous system involvement, the monitoring of neuropathy progression, and treatment effects in systemic amyloidosis. A literature search in PubMed, Embase, and Web of Science was performed on 14 February 2024 for studies investigating NfL levels in patients with systemic amyloidosis and transthyretin gene-variant (TTRv) carriers. Only studies containing original data were included. Included were thirteen full-text articles and five abstracts describing 1604 participants: 298 controls and 1306 TTRv carriers or patients with or without polyneuropathy. Patients with polyneuropathy demonstrated higher NfL levels compared to healthy controls and asymptomatic carriers. Disease onset was marked by rising NfL levels. Following the initiation of transthyretin gene-silencer treatment, NfL levels decreased and remained stable over an extended period. NfL is not an outcome biomarker, but an early and sensitive disease-process biomarker for neuropathy in systemic amyloidosis. Therefore, NfL has the potential to be used for the early detection of neuropathy, monitoring treatment effects, and monitoring disease progression in patients with systemic amyloidosis.
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  • 文章类型: Journal Article
    了解中间丝(IF)的结构和功能是必要的,以便解释为什么在脊椎动物中进化了70多个相关的IF基因,同时保持如此显着的组织特异性表达。Desmin是IF蛋白的大型多基因家族的成员,并且在肌细胞中特异性表达。为了阐明其肌肉特有的行为,我们使用酵母双杂交系统来鉴定desmin的头部结合伴侣。我们描述了线粒体和溶酶体蛋白,NADH泛醌氧化还原酶核心亚基S2(NDUFS2),和SaposinD,分别,作为直接的结蛋白结合伙伴。计算机模拟分析表明,两种相互作用在原子水平上以非常相似的方式发生,通过形成三螺旋束,在畴间空间中具有疏水相互作用,并在结蛋白头域的R16和S32处形成氢键。互动,GST下拉测定也证实了这一点,表明Desmin头域的必要性,此外,指出它在线粒体和溶酶体功能中的作用,由于结蛋白头部结构域突变而在肌病中被破坏的细胞器。
    Understanding the structure and function of intermediate filaments (IFs) is necessary in order to explain why more than 70 related IF genes have evolved in vertebrates while maintaining such dramatically tissue-specific expression. Desmin is a member of the large multigene family of IF proteins and is specifically expressed in myocytes. In an effort to elucidate its muscle-specific behavior, we have used a yeast two-hybrid system in order to identify desmin\'s head binding partners. We described a mitochondrial and a lysosomal protein, NADH ubiquinone oxidoreductase core subunit S2 (NDUFS2), and saposin D, respectively, as direct desmin binding partners. In silico analysis indicated that both interactions at the atomic level occur in a very similar way, by the formation of a three-helix bundle with hydrophobic interactions in the interdomain space and hydrogen bonds at R16 and S32 of the desmin head domain. The interactions, confirmed also by GST pull-down assays, indicating the necessity of the desmin head domain and, furthermore, point out its role in function of mitochondria and lysosomes, organelles which are disrupted in myopathies due to desmin head domain mutations.
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