exosomal miRNAs

外泌体 miRNA
  • 文章类型: Journal Article
    外泌体microRNAs(miRNAs)在对抗肝细胞癌(HCC)方面具有巨大的潜力,全球癌症相关死亡的第四大常见原因。在这项研究中,我们探索了这些小分子的各种应用,同时分析了它们在肿瘤发展中的复杂作用,转移,和肿瘤微环境的变化。我们还讨论了外泌体miRNA和其他非编码RNA如环状RNA之间存在的复杂相互作用。并显示这些相互作用如何协调推动HCC发展的重要生化途径。靶向外泌体miRNA用于治疗性干预的可能性是至关重要的,甚至超出了它们的机械意义。我们还强调了它们作为尖端生物标志物的增长潜力,可以通过早期识别来制定量身定制的治疗计划,精确的预后,和实时治疗反应监测。这种彻底的分析揭示了外泌体miRNA的复杂网络导致HCC进展。最后,还讨论了外泌体纯化和分离的策略以及用于检测外泌体miRNAs的先进生物传感技术。总的来说,这篇全面的综述揭示了肝癌外泌体miRNA的复杂网络,为诊断的未来进步提供有价值的见解,预后,最终,改善与这种致命疾病作斗争的患者的预后。
    Exosomal microRNAs (miRNAs) have great potential in the fight against hepatocellular carcinoma (HCC), the fourth most common cause of cancer-related death worldwide. In this study, we explored the various applications of these small molecules while analyzing their complex roles in tumor development, metastasis, and changes in the tumor microenvironment. We also discussed the complex interactions that exist between exosomal miRNAs and other non-coding RNAs such as circular RNAs, and show how these interactions coordinate important biochemical pathways that propel the development of HCC. The possibility of targeting exosomal miRNAs for therapeutic intervention is paramount, even beyond their mechanistic significance. We also highlighted their growing potential as cutting-edge biomarkers that could lead to tailored treatment plans by enabling early identification, precise prognosis, and real-time treatment response monitoring. This thorough analysis revealed an intricate network of exosomal miRNAs lead to HCC progression. Finally, strategies for purification and isolation of exosomes and advanced biosensing techniques for detection of exosomal miRNAs are also discussed. Overall, this comprehensive review sheds light on the complex web of exosomal miRNAs in HCC, offering valuable insights for future advancements in diagnosis, prognosis, and ultimately, improved outcomes for patients battling this deadly disease.
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  • 文章类型: Journal Article
    妊娠糖尿病(GDM)在过去的二十年中随着肥胖发病率的增加而上升。全球范围内普遍存在的内分泌干扰化学品(EDC)与GDM发病率的增加有关。表观遗传修饰,如DNA甲基化,组蛋白乙酰化,甲基化与产前暴露于EDC有关。EDC暴露还可以驱动下丘脑-垂体-甲状腺轴和各种其他信号通路的持续破坏,如甲状腺信号,PPARγ信号,PI3K-AKT信号。这种破坏导致葡萄糖代谢受损,胰岛素抵抗以及β细胞功能障碍,最终导致GDM。孕妇持续暴露EDC也会增加脂肪生成,导致妊娠期体重增加。重要的是,孕妇通过胎盘将这些内分泌转移给胎儿,从而导致其他妊娠相关并发症,如宫内生长受限(IUGR),和大的胎龄新生儿。此外,胎儿的这种早期EDC暴露增加了婴儿早期对代谢性疾病的易感性。EDC的跨代影响也与较高的血管张力有关,认知畸变,和增加对生活方式障碍,包括生殖健康异常的易感性。该综述的重点是环境毒素在诱导表观遗传改变和增加怀孕期间对代谢疾病的易感性方面的影响,需要广泛研究,以便可以开发干预措施来打破这种恶性循环。此外,使用来自患者血清的EDC相关ExomiRs可以帮助GDM的早期诊断,从而导致根据临床病理状况的风险因素增加对患者进行分类。
    Gestational Diabetes Mellitus (GDM) has been on the rise for the last two decades along with the growing incidence of obesity. The ubiquitous use of Endocrine-Disrupting Chemicals (EDCs) worldwide has been associated with this increase in GDM incidence. Epigenetic modifications such as DNA methylation, histone acetylation, and methylation have been associated with prenatal exposure to EDCs. EDC exposure can also drive a sustained disruption of the hypothalamus-pituitary-thyroid axis and various other signaling pathways such as thyroid signaling, PPARγ signaling, PI3K-AKT signaling. This disruption leads to impaired glucose metabolism, insulin resistance as well as β-cell dysfunction, which culminate into GDM. Persistent EDC exposure in pregnant women also increases adipogenesis, which results in gestational weight gain. Importantly, pregnant mothers transfer these EDCs to the fetus via the placenta, thus leading to other pregnancy-associated complications such as intrauterine growth restriction (IUGR), and large for gestational age neonates. Furthermore, this early EDC exposure of the fetus increases the susceptibility of the infant to metabolic diseases in early life. The transgenerational impact of EDCs is also associated with higher vascular tone, cognitive aberrations, and enhanced susceptibility to lifestyle disorders including reproductive health anomalies. The review focuses on the impact of environmental toxins in inducing epigenetic alterations and increasing the susceptibility to metabolic diseases during pregnancy needs to be extensively studied such that interventions can be developed to break this vicious cycle. Furthermore, the use of EDC-associated ExomiRs from the serum of patients can help in the early diagnosis of GDM, thereby leading to triaging of patients based on increasing risk factor of the clinicopathological condition.
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  • 文章类型: Journal Article
    胃癌(GC)是起源于胃粘膜上皮细胞的最突出的恶性肿瘤之一,是全球癌症相关死亡的主要原因之一。新的外泌体RNA循环生物标志物可能对GC的非侵入性早期预后具有巨大潜力。四君子汤(SJZD)是中医益气健脾法的典型代表方。然而,SJZD治疗GC的作用和机制尚不清楚。本研究寻找外泌体RNA的生物标志物对GC的早期预后,并探讨了SJZD治疗GC的机理。建立胃癌裸鼠脾虚证模型,并对SJZD的疗效进行了研究。对血浆和唾液外泌体中差异表达的miRNA进行测序和分析。这些miRNA的潜在靶基因被预测并应用于基因本体论(GO)和京都基因和基因组百科全书(KEGG)信号通路富集注释。分析了唾液和血浆样品中重叠的miRNA,和qRT-PCR进行验证。选择miR-151a-3p,qRT-PCR进一步确定miR-151a-3p在SJZD组的唾液和血浆外泌体中下调。预测交叉的miR-151a-3p靶基因并富集在外源性凋亡信号通路中。SJZD在小鼠模型中显著改善胃癌脾虚证,和外泌体miRNA,特别是miR-151-3p,可能由血浆和唾液中的SJZD调节。唾液中的外泌体miR-151-3p可作为胃癌诊断和预后的非侵入性潜在标志物。
    Gastric cancer (GC) is one of the most prominent malignancies that originate in the epithelial cells of the gastric mucosa and is one of the main causes of cancer-related mortality worldwide. New circulating biomarkers of exosomal RNA might have great potential for non-invasive early prognosis of GC. Sijunzi Decoction (SJZD) is a typical representative formula of the method of benefiting Qi and strengthening the spleen in Traditional Chinese Medicine (TCM). However, the effects and mechanism of SJZD in treating GC remain unclear. This study looked for biomarkers of exosomal RNA for early prognosis of GC, and explored the mechanism of SJZD in treating GC. A gastric cancer model with spleen deficiency syndrome was established in nude mice, and the curative effects of SJZD were investigated. Differentially expressed miRNAs in plasma and saliva exosomes were sequenced and analyzed. Potential target genes of these miRNAs were predicted and applied for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) signaling pathway enrichment annotation. Overlapping miRNAs in saliva and plasma samples were analyzed, and qRT-PCR was performed for verification. miR-151a-3p was selected, and qRT-PCR further determined that miR-151a-3p was downregulated in saliva and plasma exosomes from the SJZD group. The intersected miR-151a-3p target genes were predicted and enriched in the extrinsic apoptotic signaling pathways. SJZD significantly ameliorates gastric cancer with spleen deficiency syndrome in mouse models, and exosomal miRNAs, particularly miR-151-3p, might be modulated by SJZD in plasma and saliva. The exosomal miR-151-3p in saliva may serve as a non-invasive potential marker for gastric cancer diagnosis and prognosis.
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  • 文章类型: Journal Article
    乳腺癌是导致全球女性高发病率和死亡率的两大生殖癌症之一。尽管乳腺癌的治疗取得了进展,它的早期诊断仍然是一个挑战。最近的证据表明,尽管通过乳房X光检查巧妙地使用了许多策略来促进在社区一级对乳腺癌进行快速和精确的筛查,细针抽吸细胞学(FNAC)和生物标志物跟踪,没有一项策略被明确接受为促进疾病快速筛查的金标准.这就需要以更高的特异性来确定乳腺癌病变的检测和分诊的新策略。和灵敏度,同时考虑到患者的流行病学和社会人口统计学特征。最近的证据表明,由于外泌体的高稳定性和在体液中的存在,外泌体可能是快速筛查乳腺癌的生物材料的强大来源。越来越多的证据表明,外泌体microRNAs-在改变乳腺癌的肿瘤微环境中起着重要作用。从而可能有助于扩散,乳腺癌的侵袭和转移。在这次审查中,我们总结了ExomiRs在乳腺癌肿瘤微环境中的作用。这些ExomiRs也可以用作候选生物标志物,以促进乳腺癌患者的快速筛查和分类以进行临床干预。
    Breast cancer is one of the top two reproductive cancers responsible for high rates of morbidity and mortality among women globally. Despite the advancements in the treatment of breast cancer, its early diagnosis remains a challenge. Recent evidence indicates that despite the adroit use of numerous strategies to facilitate rapid and precision-oriented screening of breast cancer at the community level through the use of mammograms, Fine-needle aspiration cytology (FNAC) and biomarker tracking, no strategy has been unequivocally accepted as a gold standard for facilitating rapid screening for disease. This necessitates the need to identify novel strategies for the detection and triage of breast cancer lesions at higher rates of specificity, and sensitivity, whilst taking into account the epidemiologic and social-demographic features of the patients. Recent shreds of evidence indicate that exosomes could be a robust source of biomaterial for the rapid screening of breast cancer due to their high stability and their presence in body fluids. Increasing evidence indicates that the Exosomal microRNAs- play a significant role in modifying the tumour microenvironment of breast cancers, thereby potentially aiding in the proliferation, invasion and metastasis of breast cancer. In this review, we summarize the role of ExomiRs in the tumour microenvironment in breast cancer. These ExomiRs can also be used as candidate biomarkers for facilitating rapid screening and triaging of breast cancer patients for clinical intervention.
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  • 文章类型: Journal Article
    乳腺癌占全球最高的癌症病例,12%的病例进展为转移性乳腺癌,生存率低,有效的早期干预策略有限,并通过晚期诊断得到加强。此外,低浓度的预后和预测标志物阻碍了疾病监测.循环和外泌体microRNAs(miRNAs)最近在乳腺癌中显示出相当大的相互作用。作为有效的诊断和预后标志物。主要功能是在遗传和表观遗传水平上作为基因调控剂。一系列失调的miRNA刺激癌症促进机制,激活癌基因和控制肿瘤抑制基因和机制。外泌体是大量研究的细胞外囊泡,携带,运输货物,包括在肿瘤发生中起主要作用的非编码RNA。miRNA从循环到外泌体的易位,与RNA结合蛋白在应激诱导条件下,在促进乳腺癌的功能上表现出显著的合作。这篇综述研究了细胞和外泌体miRNA的生物发生和负载,它们失调的临床意义,它们在诊断中的作用,预后,和乳腺癌的预测,以及调节癌症信号通路。细胞和外泌体miRNA对乳腺癌诊断的影响具有临床意义,亚型,分期,预测,以及治疗期间的疾病监测,因此是乳腺癌的有效标志物。
    Breast cancer accounts for the highest cancer cases globally, with 12% of occurrences progressing to metastatic breast cancer with a low survival rate and limited effective early intervention strategies augmented by late diagnosis. Moreover, a low concentration of prognostic and predictive markers hinders disease monitoring. Circulating and exosomal microRNAs (miRNAs) have recently shown a considerable interplay in breast cancer, standing out as effective diagnostic and prognostic markers. The primary functions are as gene regulatory agents at the genetic and epigenetic levels. An array of dysregulated miRNAs stimulates cancer-promoting mechanisms, activating oncogenes and controlling tumor-suppressing genes and mechanisms. Exosomes are vastly studied extracellular vesicles, carrying, and transporting cargo, including noncoding RNAs with premier roles in oncogenesis. Translocation of miRNAs from the circulation to exosomes, with RNA-binding proteins in stress-induced conditions, has shown significant cooperation in function to promote breast cancer. This review examines cellular and exosomal miRNA biogenesis and loading, the clinical implications of their dysregulation, their function in diagnosis, prognosis, and prediction of breast cancer, and in regulating cancer signaling pathways. The influence of cellular and exosomal miRNAs presents clinical significance on breast cancer diagnosis, subtyping, staging, prediction, and disease monitoring during treatment, hence a potent marker for breast cancer.
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  • 文章类型: Journal Article
    血管周围脂肪组织(PVAT),为血管提供结构支撑的脂肪层,是在收缩和松弛期间保护血管壁免受邻近组织影响的衬垫。PVAT通过分泌血管活性(血管舒张和血管收缩)因子(例如,脂肪因子,batokines,和脂质因子)或含microRNA(miRNA)的外泌体,以减少肥胖引起的高反应性。特别感兴趣的是脂肪细胞来源的外泌体miRNA,作为关键的监管机构,抵消肥胖对心血管健康的有害影响。这些外来体作为强大的信使,促进miRNAs和其他参与细胞间通讯的生物活性分子的转运。毫无疑问,外泌体miRNA的独特功能通过微调内皮功能促进血管稳态,血管重塑,和炎症环境,从而预防心血管疾病。集体发现通过探索PVAT和脂肪细胞来源的外泌体miRNA协同协调血管健康的复杂机制,全面解释了它们的保护功能。一起来看,这篇综述战略性地集中在PVAT,外泌体,和脂肪细胞衍生的miRNA,提供有价值的见解,可能为心血管疾病的有针对性的干预措施的发展提供信息。
    Perivascular adipose tissue (PVAT), a fat layer that provides structural support to the blood vessels, is a cushion protecting the vessel wall from neighbouring tissues during contraction and relaxation. PVAT actively regulates vascular tone by secreting vasoactive (vasodilatory and vasoconstrictive) factors (e.g., adipokines, batokines, and lipokines) or microRNA (miRNA)-containing exosomes to reduce the hyperreactivity induced by obesity. Of particular interest are adipocyte-derived exosomal miRNAs, which act as crucial regulators, counteracting the detrimental effects of obesity on cardiovascular well-being. These exosomes serve as potent messengers, facilitating the transport of miRNAs and other bioactive molecules involved in intercellular communication. Undoubtedly, the unique function of exosomal miRNAs promotes vascular homeostasis by fine-tuning endothelial function, vascular remodelling, and inflammatory environment, thereby preventing cardiovascular disease. The collective findings comprehensively explain their protective functions by exploring the intricate mechanisms through which PVAT and adipocyte-derived exosomal miRNAs collaboratively orchestrate vascular health. Taken together, this review strategically focuses on PVAT, exosomes, and adipocyte-derived miRNAs, offering valuable insights that can potentially inform the development of targeted interventions for cardiovascular diseases.
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  • 文章类型: Journal Article
    外泌体microRNAs(miRNAs/miRs)是心血管疾病诊断和治疗的潜在生物标志物。高血糖在动脉粥样硬化的发展中起重要作用。本研究旨在探讨血清来源的外泌体miRNAs在冠心病(CHD)伴高血糖的表达谱,并确定预测冠状动脉病变的有效生物标志物。收集8例CHD和高血糖患者和8例CHD和血糖正常患者的血清样本,分离外泌体,并使用人miRNA微阵列过滤差异表达的miRNA(DEMI)。使用标准富集计算方法对DEMI的靶基因进行基因本体论(GO)和京都基因和基因组百科全书(KEGG)途径分析。应用受试者工作特征(ROC)曲线分析来评估选定的DEMI在预测冠状动脉狭窄严重程度中的价值。共有10个DEMI,包括四个上调的miRNA(hsa‑let‑7b‑5p,hsa‑miR‑4313,hsa‑miR‑4665‑3p和hsa‑miR‑940)和六个下调的miRNA(hsa‑miR‑4459,hsa‑miR‑4687‑3p,hsa‑miR‑6087、hsa‑miR‑6089、hsa‑miR‑6740‑5p和hsa‑miR‑6800‑5p),在冠心病和高血糖患者中进行筛查。GO分析表明,“细胞过程”,“单生物过程”和“生物调节”显著丰富。KEGG通路分析显示,'mTOR信号通路',“FoxO信号通路”和“神经营养蛋白信号通路”显著富集。在这些DEMI中,只有hsa‑let‑7b‑5p表达与血红蛋白A1C水平呈正相关,并与经皮冠状动脉介入治疗与心脏手术评分之间的协同作用呈正相关.ROC曲线显示,hsa‑let‑7b‑5p可以作为区分冠状动脉狭窄严重程度的有效生物标志物。总之,本研究表明,血清来源的外泌体hsa-let-7b-5p在CHD和高血糖患者中上调,并且可以作为冠状动脉狭窄严重程度的非侵入性生物标志物。
    Exosomal microRNAs (miRNAs/miRs) are potential biomarkers for the diagnosis and treatment of cardiovascular disease, and hyperglycemia serves an important role in the development of atherosclerosis. The present study aimed to investigate the expression profile of serum‑derived exosomal miRNAs in coronary heart disease (CHD) with hyperglycemia, and to identify effective biomarkers for predicting coronary artery lesions. Serum samples were collected from eight patients with CHD and hyperglycemia and eight patients with CHD and normoglycemia, exosomes were isolated and differentially expressed miRNAs (DEMIs) were filtered using a human miRNA microarray. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed using standard enrichment computational methods for the target genes of DEMIs. Receiver operating characteristic (ROC) curve analysis was applied to evaluate the values of the selected DEMIs in predicting the severity of coronary stenosis. A total of 10 DEMIs, including four upregulated miRNAs (hsa‑let‑7b‑5p, hsa‑miR‑4313, hsa‑miR‑4665‑3p and hsa‑miR‑940) and six downregulated miRNAs (hsa‑miR‑4459, hsa‑miR‑4687‑3p, hsa‑miR‑6087, hsa‑miR‑6089, hsa‑miR‑6740‑5p and hsa‑miR‑6800‑5p), were screened in patients with CHD and hyperglycemia. GO analysis showed that the \'cellular process\', \'single‑organism process\' and \'biological regulation\' were significantly enriched. KEGG pathway analysis revealed that the \'mTOR signaling pathway\', \'FoxO signaling pathway\' and \'neurotrophin signaling pathway\' were significantly enriched. Among these DEMIs, only hsa‑let‑7b‑5p expression was positively correlated with both hemoglobin A1C levels and Synergy between Percutaneous Coronary Intervention with Taxus and Cardiac Surgery score. ROC curves showed that hsa‑let‑7b‑5p could serve as an effective biomarker for differentiating the severity of coronary stenosis. In conclusion, the present study demonstrated that serum‑derived exosomal hsa‑let‑7b‑5p is upregulated in patients with CHD and hyperglycemia, and may serve as a noninvasive biomarker for the severity of coronary stenosis.
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  • 文章类型: Journal Article
    认知功能障碍是糖尿病常见的中枢神经系统(CNS)并发症之一。严重影响患者的生活质量,造成巨大的经济负担。由水通道蛋白4(AQP4)在血管周围星形胶质细胞足的丢失或重新分布介导的淋巴系统功能障碍在糖尿病引起的认知障碍(DCI)中起着至关重要的作用。然而,糖尿病状态下AQP4丢失或重新分布的机制尚不清楚.越来越多的证据表明,外周胰岛素抵抗靶组织和中枢神经系统通讯影响脑稳态,外泌体miRNAs是关键介质。糖脂代谢紊乱是糖尿病的重要病理特点,和骨骼肌,肝脏和脂肪组织是胰岛素抵抗的关键靶器官。在这次审查中,系统综述了糖尿病外周代谢紊乱引起的外泌体miRNAs的变化。我们专注于外泌体miRNAs,这些miRNAs可以在血管周围星形胶质细胞末端足中诱导低AQP4表达和再分布。这可以提供一个器官间通讯通路来说明DCI的发病机制。此外,总结了外周胰岛素抵抗靶组织外泌体分泌和中枢神经系统吸收的机制,这将有利于提出新的和可行的策略来优化糖尿病患者的DCI预防和/或治疗。
    Cognitive dysfunction is one of the common central nervous systems (CNS) complications of diabetes mellitus, which seriously affects the quality of life of patients and results in a huge economic burden. The glymphatic system dysfunction mediated by aquaporin-4 (AQP4) loss or redistribution in perivascular astrocyte endfeet plays a crucial role in diabetes-induced cognitive impairment (DCI). However, the mechanism of AQP4 loss or redistribution in the diabetic states remains unclear. Accumulating evidence suggests that peripheral insulin resistance target tissues and CNS communication affect brain homeostasis and that exosomal miRNAs are key mediators. Glucose and lipid metabolism disorder is an important pathological feature of diabetes mellitus, and skeletal muscle, liver and adipose tissue are the key target insulin resistance organs. In this review, the changes in exosomal miRNAs induced by peripheral metabolism disorders in diabetes mellitus were systematically reviewed. We focused on exosomal miRNAs that could induce low AQP4 expression and redistribution in perivascular astrocyte endfeet, which could provide an interorgan communication pathway to illustrate the pathogenesis of DCI. Furthermore, the mechanisms of exosome secretion from peripheral insulin resistance target tissue and absorption to the CNS were summarized, which will be beneficial for proposing novel and feasible strategies to optimize DCI prevention and/or treatment in diabetic patients.
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  • 文章类型: Journal Article
    背景:晚期诊断是口腔鳞状细胞癌(OSCC)的主要混杂因素之一。尽管分子诊断最近取得了进展,临床上没有疾病特异性生物标志物可用于OSCC的早期风险预测.因此,重要的是要确定使用非侵入性液体活检技术可检测的稳健生物标志物,以促进口腔癌的早期诊断.这项研究确定了潜在的唾液外泌体来源的miRNA生物标志物和负责OSCC进展的关键miRNA-mRNA网络/潜在机制。
    方法:进行小RNASeq(n=23)以鉴定源自OSCC患者的组织和唾液外泌体中的潜在miRNA生物标志物。Further,癌症基因组图谱(TCGA)数据集的综合分析(n=114),对更大的患者队列(n=70)进行qPCR验证,并利用各种临床病理参数进行统计分析,以评估所鉴定的miRNA特征的有效性。通过整合转录组测序和TCGA数据进行miRNA-mRNA网络和通路分析。用鉴定的miRNA标记转染OECM-1细胞系以观察其对各种功能机制如细胞增殖的影响。细胞周期,凋亡,侵袭和迁移潜力以及这些miRNA-mRNA网络调节的下游信号通路。
    结果:小RNASeq和TCGA数据鉴定了与对照组相比OSCC患者中12种差异表达的miRNA。在更大的患者队列中验证这些发现,miR-140-5p,miR-143-5p,和miR-145-5p被发现显著下调。该3-miRNA特征在预测疾病进展方面表现出更高的功效,并且临床上与不良预后相关(p<0.05)。转录组,TCGA,和miRNA-mRNA网络分析鉴定出HIF1a,CDH1,CD44,EGFR,和CCND1作为受miRNA标签调控的hub基因。Further,转染介导的3-miRNA标记的上调显著降低了细胞增殖,诱导细胞凋亡,通过逆转OECM-1细胞系中的EMT过程,导致G2/M期细胞周期停滞,并降低了侵袭和迁移潜力。
    结论:因此,这项研究确定了一个3-miRNA特征,该特征可用作预测OSCC疾病进展的潜在生物标志物,并揭示了将正常上皮细胞转化为恶性表型的潜在机制.
    BACKGROUND: Late diagnosis is one of the major confounders in oral squamous cell carcinoma (OSCC). Despite recent advances in molecular diagnostics, no disease-specific biomarkers are clinically available for early risk prediction of OSCC. Therefore, it is important to identify robust biomarkers that are detectable using non-invasive liquid biopsy techniques to facilitate the early diagnosis of oral cancer. This study identified potential salivary exosome-derived miRNA biomarkers and crucial miRNA-mRNA networks/underlying mechanisms responsible for OSCC progression.
    METHODS: Small RNASeq (n = 23) was performed in order to identify potential miRNA biomarkers in both tissue and salivary exosomes derived from OSCC patients. Further, integrated analysis of The Cancer Genome Atlas (TCGA) datasets (n = 114), qPCR validation on larger patient cohorts (n = 70) and statistical analysis with various clinicopathological parameters was conducted to assess the effectiveness of the identified miRNA signature. miRNA-mRNA networks and pathway analysis was conducted by integrating the transcriptome sequencing and TCGA data. The OECM-1 cell line was transfected with the identified miRNA signature in order to observe its effect on various functional mechanisms such as cell proliferation, cell cycle, apoptosis, invasive as well as migratory potential and the downstream signaling pathways regulated by these miRNA-mRNA networks.
    RESULTS: Small RNASeq and TCGA data identified 12 differentially expressed miRNAs in OSCC patients compared to controls. On validating these findings in a larger cohort of patients, miR-140-5p, miR-143-5p, and miR-145-5p were found to be significantly downregulated. This 3-miRNA signature demonstrated higher efficacy in predicting disease progression and clinically correlated with poor prognosis (p < 0.05). Transcriptome, TCGA, and miRNA-mRNA network analysis identified HIF1a, CDH1, CD44, EGFR, and CCND1 as hub genes regulated by the miRNA signature. Further, transfection-mediated upregulation of the 3-miRNA signature significantly decreased cell proliferation, induced apoptosis, resulted in G2/M phase cell cycle arrest and reduced the invasive and migratory potential by reversing the EMT process in the OECM-1 cell line.
    CONCLUSIONS: Thus, this study identifies a 3-miRNA signature that can be utilized as a potential biomarker for predicting disease progression of OSCC and uncovers the underlying mechanisms responsible for converting a normal epithelial cell into a malignant phenotype.
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  • 文章类型: Journal Article
    进行该研究,以通过高通量测序在妊娠早期母猪中筛选差异表达的miRNA,并探讨其对胚胎着床的作用机制。
    在人工授精后14天收集妊娠和非妊娠长白猪×约克郡母猪的血清,和外泌体miRNA被纯化用于高通量miRNA测序。通过qRT-PCR验证了10个差异表达(DE)miRNA的表达模式。定量逆转录-聚合酶链反应(qRT-PCR)定量检测妊娠母猪和对照母猪血清外泌体miR-192的丰度,并通过接收器工作特性(ROC)分析评估诊断能力。利用生物信息学软件对DEmiRNAs的靶基因进行预测,并对基因本体论(GO)和京都基因和基因组百科全书(KEGG)术语进行了功能和途径富集分析。此外,荧光素酶报告系统用于鉴定miR-192和整合素α4(ITGA4)之间的靶关系,影响猪胚胎植入的基因。最后,通过qRT-PCR分析miRNAs和靶基因ITGA4的表达水平,和westernblot,CCK-8检测到BeWo细胞的增殖。
    在妊娠和非妊娠母猪的文库中总共检测到221种已知的miRNA,与非妊娠对照相比,妊娠个体中55例上调,67例下调。从这些,验证了10个DEmiRNAs的表达模式。qRT-PCR分析进一步证实了miR-192在妊娠母猪血清外泌体中的表达显著增高,与对照组相比。ROC分析显示miR-192为妊娠提供了极好的诊断准确性(ROC曲线下面积[AUC]=0.843;P>0.001)。双荧光素酶报告基因测定表明miR-192直接靶向ITGA4。在过表达miR-192的细胞中,ITGA4的蛋白表达降低。miR-192的过表达导致BeWo细胞的增殖减少,并调节细胞周期相关基因的表达。
    血清外泌体miR-192可以作为猪早期妊娠的潜在生物标志物。miR-192直接靶向ITGA4基因,miR-192可以调节细胞增殖。
    OBJECTIVE: The study was conducted to screen differentially expressed miRNAs in sows at early pregnancy by high-throughput sequencing and explore its mechanism of action on embryo implantation.
    METHODS: The blood serum of pregnant and non-pregnant Landrace×Yorkshire sows were collected 14 days after artificial insemination, and exosomal miRNAs were purified for high throughput miRNA sequencing. The expression patterns of 10 differentially expressed (DE) miRNAs were validated by quantitative reverse transcription-polymerase chain reaction (qRT-PCR). The qRT-PCR quantified the abundance of serum exosomal miR-192 in pregnant and control sows, and the diagnostic power was assessed by receiver operating characteristic (ROC) analysis. The target genes of DE miRNAs were predicted with bioinformatics software, and the functional and pathway enrichment analysis was performed on gene ontology and the Kyoto encyclopedia of genes and genomes terms. Furthermore, a luciferase reporter system was used to identify the target relation between miR-192 and integrin alpha 4 (ITGA4), a gene influencing embryo implantation in pigs. Finally, the expression levels of miRNAs and the target gene ITGA4 were analyzed by qRT-PCR, and western blot, with the proliferation of BeWo cells detected by cell counting kit-8 (CCK-8).
    RESULTS: A total of 221 known miRNAs were detected in the libraries of the pregnant and non-pregnant sows, of which 55 were up-regulated and 67 were down-regulated in the pregnant individuals compared with the non-pregnant controls. From these, the expression patterns of 10 DE miRNAs were validated. The qRT-PCR analysis further confirmed a significantly higher expression of miR-192 in the serum exosomes extracted from pregnant sows, when compared to controls. The ROC analysis revealed that miR-192 provided excellent diagnostic accuracy for pregnancy (area under the ROC curve [AUC] = 0.843; p>0.001). The dual-luciferase reporter assay indicated that miR-192 directly targeted ITGA4. The protein expression of ITGA4 was reduced in cells that overexpressed miR-192. Overexpression of miR-192 resulted in the decreased proliferation of BeWo cells and regulated the expression of cell cycle-related genes.
    CONCLUSIONS: Serum exosomal miR-192 could serve as a potential biomarker for early pregnancy in pigs. miR-192 targeted ITGA4 gene directly, and miR-192 can regulate cellular proliferation.
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