Twin Studies as Topic

双胞胎研究为主题
  • 文章类型: Journal Article
    在我们迅速老龄化的人口中改善人类健康从未如此迫切。端粒,线性染色体末端的保护性“帽”,对于维持真核基因组的基因组稳定性至关重要。由于它们的物理位置和阿列克谢·奥洛夫尼科夫博士最初设想的“末端复制问题”,端粒随着细胞分裂而缩短,其含义非常深刻。端粒是衰老的标志和分子驱动因素,以及遗传累积效应的基本整合成分,生活方式,和环境因素随着时间的推移侵蚀端粒长度。正在进行的端粒消耗和细胞衰老对复制潜力的限制具有强大的肿瘤抑制功能,也是衰老和一系列与年龄相关的退行性病变的基础,包括降低生育率,痴呆症,心血管疾病和癌症。然而,关于长期太空探索和其他行星最终居住相关的非凡压力和暴露的数据很少,这些任务如何影响端粒,繁殖,健康,疾病风险,和衰老。这里,我们简要回顾一下我们目前的理解,由于NASA的双胞胎研究,近年来取得了显着进步,有史以来对与航天相关的人类健康影响进行的最全面的评估。因此,双胞胎研究处于宇航员个性化太空医学方法的最前沿,并为后续任务奠定了基础。我们还从当前的理解推断到未来的任务,强调可能使人类生存的潜在生物和生化策略,并考虑在极端的太空环境中长寿的前景。
    Improving human healthspan in our rapidly aging population has never been more imperative. Telomeres, protective \"caps\" at the ends of linear chromosomes, are essential for maintaining genome stability of eukaryotic genomes. Due to their physical location and the \"end-replication problem\" first envisioned by Dr. Alexey Olovnikov, telomeres shorten with cell division, the implications of which are remarkably profound. Telomeres are hallmarks and molecular drivers of aging, as well as fundamental integrating components of the cumulative effects of genetic, lifestyle, and environmental factors that erode telomere length over time. Ongoing telomere attrition and the resulting limit to replicative potential imposed by cellular senescence serves a powerful tumor suppressor function, and also underlies aging and a spectrum of age-related degenerative pathologies, including reduced fertility, dementias, cardiovascular disease and cancer. However, very little data exists regarding the extraordinary stressors and exposures associated with long-duration space exploration and eventual habitation of other planets, nor how such missions will influence telomeres, reproduction, health, disease risk, and aging. Here, we briefly review our current understanding, which has advanced significantly in recent years as a result of the NASA Twins Study, the most comprehensive evaluation of human health effects associated with spaceflight ever conducted. Thus, the Twins Study is at the forefront of personalized space medicine approaches for astronauts and sets the stage for subsequent missions. We also extrapolate from current understanding to future missions, highlighting potential biological and biochemical strategies that may enable human survival, and consider the prospect of longevity in the extreme environment of space.
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  • 文章类型: Journal Article
    在过去的几年中,对基于语音的情感识别(SER)技术的临床应用的研究一直在稳步增长。一种这样的潜在应用是在家庭环境中自动识别表达的情感(EE)成分。EE的识别非常重要,因为它们与一系列不良生活事件有关。这些事件的手动编码需要耗时的专业培训,扩大对自动化方法的需求。在这里,我们描述了一种用于确定温暖程度的自动化机器学习方法,EE的一个关键组成部分,从声学和文本自然语言特征。我们52次记录采访的数据集取自录音,20多年前收集的,来自英国双胞胎儿童的全国代表性出生队列,并由两名研究人员手动编码为EE(评分者间可靠性0.84-0.90)。我们证明,尽管使用质量变化很大的录音,但可以预测F1评分为64.7%的温暖程度。我们非常有希望的结果表明,机器学习可能能够在不久的将来帮助EE的编码。
    Research into clinical applications of speech-based emotion recognition (SER) technologies has been steadily increasing over the past few years. One such potential application is the automatic recognition of expressed emotion (EE) components within family environments. The identification of EE is highly important as they have been linked with a range of adverse life events. Manual coding of these events requires time-consuming specialist training, amplifying the need for automated approaches. Herein we describe an automated machine learning approach for determining the degree of warmth, a key component of EE, from acoustic and text natural language features. Our dataset of 52 recorded interviews is taken from recordings, collected over 20 years ago, from a nationally representative birth cohort of British twin children, and was manually coded for EE by two researchers (inter-rater reliability 0.84-0.90). We demonstrate that the degree of warmth can be predicted with an F1-score of 64.7% despite working with audio recordings of highly variable quality. Our highly promising results suggest that machine learning may be able to assist in the coding of EE in the near future.
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  • 文章类型: Journal Article
    认知功能下降和脊柱疼痛(背痛[BP]和颈痛[NP])是一项重大的公共卫生挑战,然而,他们之间的潜在关系仍然难以捉摸。对丹麦双胞胎的纵向研究进行了回顾性分析,以确定BP/NP与适应年龄的认知功能之间的任何潜在关系。性别,教育和社会经济地位。总共4731名78±6(SD)岁的成年人(2788名女性/1943名男性)被纳入分析。我们观察到BP的1个月患病率为25%,21%的NP和11%的联合BP/NP。虽然男性和女性合并BP/NP的认知评分没有差异,与没有合并BP/NP的那些相比(34.38点[95%置信区间(CI)=31.88,36.88]与35.72分[95%CI=35.19,36.26];P=0.180;35.72分[95%CI=35.19,36.26]与35.85分[95%CI=35.39,36.31];P=0.327;对于男性和女性,分别),调整后的分析显示,与没有合并BP/NP的男性相比,合并BP/NP的男性认知得分较低(81.26分[95%CI=73.80,88.72]与79.48分[95%CI=70.31,88.66];P=0.043)。这项假设生成研究的结果可能强调了脊柱疼痛与晚年神经变性之间潜在的性别特异性关联。
    Cognitive decline and spinal pain (back pain [BP] and neck pain [NP]) represent a major public health challenge, yet the potential relationship between them remains elusive. A retrospective analysis of the Longitudinal Study of Ageing Danish Twins was performed to determine any potential relationships between BP/NP and cognitive function adjusting for age, sex, educational and socioeconomic status. A total of 4731 adults (2788 females/1943 males) aged 78 ± 6 (SD) years were included in the analysis. We observed a 1-month prevalence of 25% with BP, 21% with NP and 11% for combined BP/NP. While there were no differences in cognition scores for males and females reporting combined BP/NP, compared to those without combined BP/NP (34.38 points [95% confidence interval (CI) = 31.88, 36.88] vs. 35.72 points [95% CI = 35.19, 36.26]; P = 0.180; and 35.72 points [95% CI = 35.19, 36.26] vs. 35.85 points [95% CI = 35.39, 36.31]; P = 0.327; for male and females, respectively), an adjusted analysis revealed that males with combined BP/NP presented with lower cognitive scores compared to males without combined BP/NP (81.26 points [95% CI = 73.80, 88.72] vs. 79.48 points [95% CI = 70.31, 88.66]; P = 0.043). The findings of this hypothesis-generating study may highlight a potential sex-specific association between spinal pain and later-life neurodegeneration.
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  • 文章类型: Journal Article
    背景:最新的最先进的测序技术能够研究人类基因组中具有挑战性的区域,并扩大变体基准测试数据集的范围。在这里,我们排列了一个中国四重奏,包括两个单卵双胞胎女儿和他们的亲生父母,使用四个短测序平台和长测序平台(Illumina,华大基因,PacBio,和牛津纳米孔技术)。
    结果:使用亲子遗传图谱和每个单倍型,将单卵双胞胎女儿的长读数分为父系和母系单倍型。我们还使用长读段来生成单倍型解析的全基因组组装体,其完整性和连续性超过GRCh38。利用这个四重奏,我们对人类的变化景观进行了全面的分类,生成3,962,453个SNV的数据集,886,648个指数(<50bp),9726个大缺失(≥50bp),15600个大插入(≥50bp),40次倒置,31个复杂的结构变体,和68个从头突变,这些突变在单卵双胞胎女儿之间共享。由于其复杂性,以前基准中代表性不足的变体——包括位于长重复区域的变体,复杂的结构变体,和从头突变-在这项研究中进行了系统检查。
    结论:总之,这项研究提供了高质量的单倍型解析装配和一套全面的基准资源,为两个中国单卵双胞胎样品,相对于现有的基准,提供扩展的基因组覆盖范围和对复杂变体类别的洞察。
    Recent state-of-the-art sequencing technologies enable the investigation of challenging regions in the human genome and expand the scope of variant benchmarking datasets. Herein, we sequence a Chinese Quartet, comprising two monozygotic twin daughters and their biological parents, using four short and long sequencing platforms (Illumina, BGI, PacBio, and Oxford Nanopore Technology).
    The long reads from the monozygotic twin daughters are phased into paternal and maternal haplotypes using the parent-child genetic map and for each haplotype. We also use long reads to generate haplotype-resolved whole-genome assemblies with completeness and continuity exceeding that of GRCh38. Using this Quartet, we comprehensively catalogue the human variant landscape, generating a dataset of 3,962,453 SNVs, 886,648 indels (< 50 bp), 9726 large deletions (≥ 50 bp), 15,600 large insertions (≥ 50 bp), 40 inversions, 31 complex structural variants, and 68 de novo mutations which are shared between the monozygotic twin daughters. Variants underrepresented in previous benchmarks owing to their complexity-including those located at long repeat regions, complex structural variants, and de novo mutations-are systematically examined in this study.
    In summary, this study provides high-quality haplotype-resolved assemblies and a comprehensive set of benchmarking resources for two Chinese monozygotic twin samples which, relative to existing benchmarks, offers expanded genomic coverage and insight into complex variant categories.
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  • 文章类型: Journal Article
    背景:强迫症(OCD)的病因尚不清楚。基因搜索工作正在顺利进行,但是环境风险因素的识别至少同样重要,应该是一个优先事项,因为其中一些可能适合预防或早期干预策略。基因信息研究,特别是那些采用不一致单卵(MZ)双胞胎设计的人,非常适合研究环境风险因素。本协议文件描述了研究的基本原理,目标,和OCDTWIN的方法,对强迫症诊断不一致的MZ双胞胎对的开放队列。
    方法:OCDTWIN有两个广泛的目标。在目标1中,我们从瑞典各地招募MZ双胞胎,进行全面的临床评估,建立一个生物样本库,包括血,唾液,尿液,凳子,头发,指甲,和多模态脑成像。丰富的早期生命暴露(例如,围产期变量,健康相关信息,社会心理压力源)可通过与全国登记册和瑞典双胞胎登记处联系获得。存储在瑞典苯丙酮尿症(PKU)生物库中的血点将可用于提取DNA,蛋白质,和代谢物,提供出生时生物材料的宝贵来源。在目标2中,我们将对不一致的MZ双胞胎进行配对比较,这将使我们能够分离出导致强迫症的因果途径中的独特环境风险因素,同时严格控制遗传和早期共同的环境影响。迄今为止(2023年5月),已招募了43对双胞胎(21对强迫症不一致)。
    结论:OCDTWIN希望对强迫症的因果途径中的环境风险因素产生独特的见解,其中一些有可能成为可采取行动的目标。
    The causes of obsessive-compulsive disorder (OCD) remain unknown. Gene-searching efforts are well underway, but the identification of environmental risk factors is at least as important and should be a priority because some of them may be amenable to prevention or early intervention strategies. Genetically informative studies, particularly those employing the discordant monozygotic (MZ) twin design, are ideally suited to study environmental risk factors. This protocol paper describes the study rationale, aims, and methods of OCDTWIN, an open cohort of MZ twin pairs who are discordant for the diagnosis of OCD.
    OCDTWIN has two broad aims. In Aim 1, we are recruiting MZ twin pairs from across Sweden, conducting thorough clinical assessments, and building a biobank of biological specimens, including blood, saliva, urine, stool, hair, nails, and multimodal brain imaging. A wealth of early life exposures (e.g., perinatal variables, health-related information, psychosocial stressors) are available through linkage with the nationwide registers and the Swedish Twin Registry. Blood spots stored in the Swedish phenylketonuria (PKU) biobank will be available to extract DNA, proteins, and metabolites, providing an invaluable source of biomaterial taken at birth. In Aim 2, we will perform within-pair comparisons of discordant MZ twins, which will allow us to isolate unique environmental risk factors that are in the causal pathway to OCD, while strictly controlling for genetic and early shared environmental influences. To date (May 2023), 43 pairs of twins (21 discordant for OCD) have been recruited.
    OCDTWIN hopes to generate unique insights into environmental risk factors that are in the causal pathway to OCD, some of which have the potential of being actionable targets.
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  • 文章类型: Journal Article
    双胞胎样本允许进行准实验的共同双胞胎病例控制方法,可以控制大脑认知关联中的遗传和环境混杂,与无关个体的研究相比,在因果关系方面提供更多信息。我们对利用不一致的共孪生设计来研究阿尔茨海默病的脑成像标志物与认知的关联的研究进行了综述。纳入标准包括在认知或阿尔茨海默病成像标志物方面不一致的双胞胎对,以及在认知和大脑测量之间的关联上的双胞胎对内比较报告。我们的PubMed搜索(2022年4月23日,2023年3月9日更新)导致18项研究符合这些标准。阿尔兹海默病的成像标记只有很少的研究,大多数样本量小。结构磁共振成像研究表明,与认知表现较差的双胞胎相比,具有更好认知表现的双胞胎的海马体积更大,皮质更厚。没有研究研究皮质表面积。正电子发射断层扫描成像研究表明,较低的皮质葡萄糖代谢率和较高的皮质神经炎症,淀粉样蛋白,和tau积累与双胞胎对内比较中较差的情景记忆有关。到目前为止,只有双生子对中皮质淀粉样蛋白和海马体积与认知的横断面关联被复制.
    Twin samples allow to conduct a quasi-experimental co-twin case-control approach that can control for genetic and environmental confounding in brain-cognition associations, being more informative on causality compared with studies in unrelated individuals. We conducted a review of studies that have utilized discordant co-twin design to investigate the associations of brain imaging markers of Alzheimer\'s disease and cognition. Inclusion criteria encompassed twin pairs discordant for cognition or Alzheimer\'s disease imaging markers and reporting of within-twin pair comparison on the association between cognition and brain measures. Our PubMed search (2022 April 23, updated 2023 March 9) resulted in 18 studies matching these criteria. Alzheimer\'s disease imaging markers have been addressed only by few studies, most with small sample size. Structural magnetic resonance imaging studies have indicated greater hippocampal volume and thicker cortex in co-twins with better cognitive performance compared with their co-twins with poorer cognitive performance. No studies have looked at cortical surface area. Positron emission tomography imaging studies have suggested that lower cortical glucose metabolism rate and higher cortical neuroinflammation, amyloid, and tau accumulations are related to poorer episodic memory in within-twin pair comparisons. Thus far, only cross-sectional within-twin pair associations of cortical amyloid and hippocampal volume with cognition have been replicated.
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  • 文章类型: Journal Article
    尽管全表观基因组关联研究(EWAS)已成功鉴定与疾病状态相关的DNA甲基化(DNAm)模式,对疾病的病因机制的任何进一步描述仍然难以捉摸。这种知识差距并非源于缺乏DNAm-性状关联,而是源于影响EWAS结果可解释性的研究设计问题。尽管在预测特定CpG位点的功能方面存在已知的局限性,大多数EWAS坚持广泛的假设,即DNAm的改变会导致最接近基因的转录随之发生变化。这项研究在两个队列中整合了DNAm和基因表达(GE)测量,青少年和年轻成人双胞胎研究(AYATS)和怀孕,种族,环境,基因(PREG)研究,提高对表观基因组调控机制的理解。与顺式GE相关的CpG位点富集在转录因子结合区域和中低CpG密度区域。与反式GE相关的CpG位点也在已知监管意义的区域富集,包括增强子区域。这些结果突出了将DNAm转录本注释限制在小基因组间隔的问题,并质疑假设顺式DNAm-GE途径的有效性。基于这些发现,EWAS结果的解释在没有多组学支持的研究中受到限制,进一步的研究应确定GE相关DNAm过度代表的基因组区域.对GE相关CpG位点的深入表征可以改善对DNAm改变的下游功能影响的预测,并为解释EWAS产生的DNAm性状关联提供最佳实践。
    Although epigenome-wide association studies (EWAS) have been successful in identifying DNA methylation (DNAm) patterns associated with disease states, any further characterization of etiologic mechanisms underlying disease remains elusive. This knowledge gap does not originate from a lack of DNAm-trait associations, but rather stems from study design issues that affect the interpretability of EWAS results. Despite known limitations in predicting the function of a particular CpG site, most EWAS maintain the broad assumption that altered DNAm results in a concomitant change of transcription at the most proximal gene. This study integrated DNAm and gene expression (GE) measurements in two cohorts, the Adolescent and Young Adult Twin Study (AYATS) and the Pregnancy, Race, Environment, Genes (PREG) study, to improve the understanding of epigenomic regulatory mechanisms. CpG sites associated with GE in cis were enriched in areas of transcription factor binding and areas of intermediate-to-low CpG density. CpG sites associated with trans GE were also enriched in areas of known regulatory significance, including enhancer regions. These results highlight issues with restricting DNAm-transcript annotations to small genomic intervals and question the validity of assuming a cis DNAm-GE pathway. Based on these findings, the interpretation of EWAS results is limited in studies without multi-omic support and further research should identify genomic regions in which GE-associated DNAm is overrepresented. An in-depth characterization of GE-associated CpG sites could improve predictions of the downstream functional impact of altered DNAm and inform best practices for interpreting DNAm-trait associations generated by EWAS.
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  • 文章类型: Journal Article
    因为衰老的纵向研究通常缺乏早期认知数据,目前尚不清楚一般认知能力(GCA)在整个生命过程中是如何变化的.在1173越南时代双胞胎老龄化研究(VETSA)参与者,我们在平均年龄20岁时评估了年轻成人GCA,在平均年龄56岁时评估了3次VETSA评估时的GCA.自始至终使用相同的GCA指数。从51岁到73岁,较高的年轻成人GCA和更好的GCA维持与更强的特定认知能力相关。在56岁时给予同等的GCA,20岁以上GCA的个体表现优于那些GCA在记忆方面保持稳定的个体,执行功能,和工作记忆能力从51岁到73岁。因此,矛盾的是,尽管GCA的维护较差,年轻的成年人GCA仍然可以获得好处。先进的预测脑年龄以及血管负荷升高和APOE-ε4状态的组合与GCA的维持较差相关。这些发现强调了区分峰值和当前GCA对于更好地理解认知衰老的重要性。
    Because longitudinal studies of aging typically lack cognitive data from earlier ages, it is unclear how general cognitive ability (GCA) changes throughout the life course. In 1173 Vietnam Era Twin Study of Aging (VETSA) participants, we assessed young adult GCA at average age 20 and current GCA at 3 VETSA assessments beginning at average age 56. The same GCA index was used throughout. Higher young adult GCA and better GCA maintenance were associated with stronger specific cognitive abilities from age 51 to 73. Given equivalent GCA at age 56, individuals who had higher age 20 GCA outperformed those whose GCA remained stable in terms of memory, executive function, and working memory abilities from age 51 to 73. Thus, paradoxically, despite poorer maintenance of GCA, high young adult GCA still conferred benefits. Advanced predicted brain age and the combination of elevated vascular burden and APOE-ε4 status were associated with poorer maintenance of GCA. These findings highlight the importance of distinguishing between peak and current GCA for greater understanding of cognitive aging.
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  • 文章类型: Journal Article
    Lens and skin fluorescence are related to the systemic accumulation of advanced glycation end products, which is accelerated in diabetes. We have examined lens fluorescence and skin fluorescence in healthy adult twins. The study enrolled twins aged median 59 years from a national population-based registry. Diabetic individuals were excluded from analysis. The interrelatedness between fluorescence parameters and relations between fluorescence and age, current HbA1c and smoking pack years were examined using correlation tests and mixed model linear regression analyses. Broad-sense heritability was analyzed and compared for lens fluorescence, skin fluorescence and HbA1c. Lens fluorescence and skin fluorescence were crudely interrelated (R = 0.38). In linear regression analyses, age explained a larger fraction of the variance in lens fluorescence (R2 = 32%) than in skin fluorescence (R2 = 20%), whereas HbA1c explained smaller variance fractions (R2 = 3% and 8%, respectively) followed by smoking pack years (4% and 3%, respectively). In multivariate analyses, age, HbA1c and smoking pack years combined explained more of the variance in lens fluorescence (R2 = 35%) than in skin fluorescence (R2 = 21%), but the influence of HbA1c on lens fluorescence was not statistically significant (p = .2). Age-adjusted broad-sense heritability was 85% for lens fluorescence, 53% for skin fluorescence and 71% for HbA1c in best fitting heritability models. Both fluorescence parameters increased with age, current glycemia and cumulative smoking. Lens fluorescence was found to be a predominantly heritable trait, whereas skin fluorescence was more influenced by environmental factors and closer related to current glycemia. The results suggest that skin fluorophores have a faster turn-over than lens fluorophores.
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  • 文章类型: Journal Article
    目的:假设肠道菌群与胰岛素抵抗和其他代谢变量有关。然而,基于人群的研究数据有限。我们调查了北芬兰出生队列1966(NFBC1966)和TwinsUK队列中代谢健康的血清学指标与肠道微生物组之间的关联。
    方法:在来自NFBC1966的506名具有可用粪便微生物组(16SrRNA基因序列)数据的个体中,我们估计了肠道微生物组多样性指标与HOMA胰岛素抵抗(HOMA-IR)血清学水平之间的关联,HbA1c和C反应蛋白(CRP)使用多变量线性回归模型调整性别,吸烟状况和BMI。肠道微生物组多样性测量与HOMA-IR和CRP之间的关联在来自TwinsUK的1140名成年参与者中被复制,可用的粪便微生物组(16SrRNA基因序列)数据。对于这两个队列,我们使用具有准泊松分布和基于微生物组回归的核关联检验(MiRKAT)的一般线性模型来估计代谢变量与α和β多样性指标的关联,分别,以及适用于零膨胀β分布的位置尺度和形状(GAMLSS)的广义加性模型,以识别与代谢标记相关的分类单元。
    结果:在NFBC1966中,HOMA-IR较高的个体的α多样性较低,HOMA-IR的第一个四分位数平均为74.4(95%CI70.7,78.3)扩增子序列变体(ASV),HOMA-IR的第四个四分位数为66.6(95%CI62.9,70.4)。HbA1c越高,α多样性也越低(ASV数量和香农多样性,p分别<0.001和p=0.003)和更高的CRP(ASV的数量,p=0.025),即使在调整了BMI和其他潜在的混杂因素之后。在TwinsUK,在HOMA-IR和CRP测量值较高的参与者中,α多样性测量值也较低.当考虑β多样性措施时,我们发现NFBC1966和TwinsUK中的微生物群落分布与HOMA-IR相关,使用多变量MiRKAT模型,二项式偏差差异p值<0.001。在GAMLSS模型中,在两个队列中,普雷沃氏菌属和布劳特氏菌属的相对丰度与HOMA-IR相关.
    结论:总体而言,更高水平的HOMA-IR,在NFBC1966和TwinsUK队列中,CRP和HbA1c与较低的微生物组多样性相关,即使在调整了BMI和其他变量之后。来自两个不同的基于人群的队列的这些结果为代谢变量与肠道微生物多样性之间的关联提供了证据。现在需要进一步的实验和机械见解,以提供对可能将肠道微生物群与代谢健康联系起来的潜在因果机制的理解。
    The gut microbiome is hypothesised to be related to insulin resistance and other metabolic variables. However, data from population-based studies are limited. We investigated associations between serologic measures of metabolic health and the gut microbiome in the Northern Finland Birth Cohort 1966 (NFBC1966) and the TwinsUK cohort.
    Among 506 individuals from the NFBC1966 with available faecal microbiome (16S rRNA gene sequence) data, we estimated associations between gut microbiome diversity metrics and serologic levels of HOMA for insulin resistance (HOMA-IR), HbA1c and C-reactive protein (CRP) using multivariable linear regression models adjusted for sex, smoking status and BMI. Associations between gut microbiome diversity measures and HOMA-IR and CRP were replicated in 1140 adult participants from TwinsUK, with available faecal microbiome (16S rRNA gene sequence) data. For both cohorts, we used general linear models with a quasi-Poisson distribution and Microbiome Regression-based Kernel Association Test (MiRKAT) to estimate associations of metabolic variables with alpha- and beta diversity metrics, respectively, and generalised additive models for location scale and shape (GAMLSS) fitted with the zero-inflated beta distribution to identify taxa associated with the metabolic markers.
    In NFBC1966, alpha diversity was lower in individuals with higher HOMA-IR with a mean of 74.4 (95% CI 70.7, 78.3) amplicon sequence variants (ASVs) for the first quartile of HOMA-IR and 66.6 (95% CI 62.9, 70.4) for the fourth quartile of HOMA-IR. Alpha diversity was also lower with higher HbA1c (number of ASVs and Shannon\'s diversity, p < 0.001 and p = 0.003, respectively) and higher CRP (number of ASVs, p = 0.025), even after adjustment for BMI and other potential confounders. In TwinsUK, alpha diversity measures were also lower among participants with higher measures of HOMA-IR and CRP. When considering beta diversity measures, we found that microbial community profiles were associated with HOMA-IR in NFBC1966 and TwinsUK, using multivariate MiRKAT models, with binomial deviance dissimilarity p values of <0.001. In GAMLSS models, the relative abundances of individual genera Prevotella and Blautia were associated with HOMA-IR in both cohorts.
    Overall, higher levels of HOMA-IR, CRP and HbA1c were associated with lower microbiome diversity in both the NFBC1966 and TwinsUK cohorts, even after adjustment for BMI and other variables. These results from two distinct population-based cohorts provide evidence for an association between metabolic variables and gut microbial diversity. Further experimental and mechanistic insights are now needed to provide understanding of the potential causal mechanisms that may link the gut microbiota with metabolic health.
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