Polar

Polar
  • 文章类型: Journal Article
    冰山和冰岛(大,表格冰山)在进入北极水域的需求增加的时候,对海洋船只和基础设施构成重大危害。对原位冰山跟踪数据的需求不断增长,以监测其漂移轨迹并改进用于冰灾预测的模型,然而,商业跟踪设备的高成本通常会阻止以最佳的空间和时间分辨率进行监控。这里,我们提供了Cryologger冰跟踪信标(ITB)的详细说明,一个低成本的,健壮,以及基于Arduino开源电子平台的用户友好型数据记录器和遥测仪,用于跟踪冰山和冰岛。设计用于至少2年的部署,每小时采样间隔可由最终用户远程修改,CryologgerITB提供了长期的位置测量,温度,压力,螺距,roll,标题,和电池电压。数据以用户指定的间隔通过铱卫星网络传输。我们介绍了2018年和2019年的实地运动结果,其中在格陵兰,埃尔斯米尔和巴芬群岛的沿海部署了16个ITB。这些ITB部署的总体成功表明,开源硬件和软件可以提供一种可靠且经济高效的方法来监测极地地区的冰山和冰岛。
    Icebergs and ice islands (large, tabular icebergs) present a significant hazard to marine vessels and infrastructure at a time when demand for access to Arctic waters is increasing. There is a growing demand for in situ iceberg tracking data to monitor their drift trajectories and improve models used for operational forecasting of ice hazards, yet the high cost of commercial tracking devices often prevents monitoring at optimal spatial and temporal resolutions. Here, we provide a detailed description of the Cryologger Ice Tracking Beacon (ITB), a low-cost, robust, and user-friendly data logger and telemeter for tracking icebergs and ice islands based on the Arduino open-source electronics platform. Designed for deployments of at least 2 years with an hourly sampling interval that is remotely modifiable by the end user, the Cryologger ITB provides long-term measurements of position, temperature, pressure, pitch, roll, heading, and battery voltage. Data are transmitted via the Iridium satellite network at user-specified intervals. We present the results of field campaigns in 2018 and 2019, which saw the deployment of 16 ITBs along the coasts of Greenland and Ellesmere and Baffin islands. The overall success of these ITB deployments has demonstrated that inexpensive, open-source hardware and software can provide a reliable and cost-effective method of monitoring icebergs and ice islands in the polar regions.
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  • 文章类型: Journal Article
    目的:在本研究中,我们使用荧光视频显微镜在噬菌体裂解前的几分钟内跟踪绿色荧光蛋白(GFP)标记的holin。我们的工作将先前的遗传和生化数据背景化,显示孔形成的开始时间以及与溶解破裂部位相关的holin低聚物形成的位置。此外,先前的工作表明,λ感染细胞的形态特征是在细胞极点开始的爆炸性事件;然而,其依据尚不明确。这项研究表明,holin最常在细胞极处寡聚化,并且寡聚化的位置与裂解爆裂的位置在空间上相关。因此,holin是噬菌体λ极性裂解形态的关键贡献者。
    The infection cycle of phage λ terminates in lysis mediated by three types of lysis proteins, each disrupting a layer in the bacterial envelope: the S105 holin, the R endolysin, and the Rz/Rz1 spanin complex targeting the inner membrane, cell wall or peptidoglycan, and the outer membrane, respectively. Video microscopy has shown that in most infections, lysis occurs as a sudden, explosive event at a cell pole, such that the initial product is a less refractile ghost that retains rod-shaped morphology. Here, we investigate the molecular basis of polar lysis using time-lapse fluorescence microscopy. The results indicate that the holin determines the morphology of lysis by suddenly forming two-dimensional rafts at the poles about 100 s prior to lysis. Given the physiological and biochemical similarities between the lambda holin and other class I holins, dynamic redistribution and sudden concentration may be common features of holins, probably reflecting the fitness advantage of all-or-nothing lysis regulation.IMPORTANCEIn this study, we use fluorescent video microscopy to track -green fluorescent protein (GFP)-labeled holin in the minutes prior to phage lysis. Our work contextualizes prior genetic and biochemical data, showing when hole formation starts and where holin oligomers form in relation to the site of lytic rupture. Furthermore, prior work showed that the morphology of lambda-infected cells is characterized by an explosive event starting at the cell pole; however, the basis for this was not clear. This study shows that holin most often oligomerizes at cell poles and that the site of the oligomerization is spatially correlated with the site of lytic blowout. Therefore, the holin is the key contributor to polar lysis morphology for phage lambda.
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  • 文章类型: Journal Article
    浮游有孔虫是一种钙化的海洋原生生物,是极地海洋中的主要浮游有孔虫。使其成为海洋极地生态系统的关键物种。有孔虫的碳酸钙壳广泛用于古气候研究,因为它们的化学成分反映了它们生长的海水条件。该物种为过去的表层海洋水文学提供了独特的代理数据,这可以为未来的气候情景提供有价值的见解。然而,关于厚皮奈瑟菌对变化和变化的环境条件的反应知之甚少。这里,我们展示了大规模培养实验的观察结果,盐度和碳酸盐化学独立改变。我们观察到总体死亡率低,在我们所有的治疗中,新的室钙化和次生方解石外壳的添加。培养中的无性繁殖事件也使我们能够监测耳毛的后代的可变生长。几个标本的休眠期或不活动期延长,然后恢复。这些观察表明厚皮奈瑟菌可以耐受,在广泛的环境条件下适应和钙化。这对海洋变暖和酸化的物种水平反应有影响,未来的研究旨在培养厚皮杆菌和在古环境重建中的应用。
    The planktic foraminifera Neogloboquadrina pachyderma is a calcifying marine protist and the dominant planktic foraminifera species in the polar oceans, making it a key species in marine polar ecosystems. The calcium carbonate shells of foraminifera are widely used in palaeoclimate studies because their chemical composition reflects the seawater conditions in which they grow. This species provides unique proxy data for past surface ocean hydrography, which can provide valuable insight to future climate scenarios. However, little is known about the response of N. pachyderma to variable and changing environmental conditions. Here, we present observations from large-scale culturing experiments where temperature, salinity and carbonate chemistry were altered independently. We observed overall low mortality, calcification of new chambers and addition of secondary calcite crust in all our treatments. In-culture asexual reproduction events also allowed us to monitor the variable growth of N. pachyderma\'s offspring. Several specimens had extended periods of dormancy or inactivity after which they recovered. These observations suggest that N. pachyderma can tolerate, adapt to and calcify within a wide range of environmental conditions. This has implications for the species-level response to ocean warming and acidification, for future studies aiming to culture N. pachyderma and use in palaeoenvironmental reconstruction.
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  • 文章类型: Journal Article
    已经描述了一种改良的超声乳化技术,用于在具有核硬化的后极性白内障中进行核乳化,从而避免了水解剖或核旋转。在进行垂直切割操作以分割细胞核之后,两个饼状的核碎片从初始切碎的两侧被移除。然后使用第二个仪器将剩余的核碎片依次向中心滚动并乳化,同时保持完整的表核外壳,保护脆弱的后囊。该技术已在54例后极性白内障和II-IV级核硬化患者的62眼中成功进行。ChopandTumble核切开术是一种安全有效的超声乳化技术,可用于后极性白内障伴核硬化,通常避免水解剖和核旋转。
    A modified phaco chop technique for nuclear emulsification in posterior polar cataracts with nuclear sclerosis that avoids hydrodissection or nuclear rotation has been described. After performing a vertical chop maneuver to divide the nucleus, two pie-shaped nuclear fragments are removed from either side of the initial chop. The remaining nuclear fragments are then sequentially tumbled toward the center using the second instrument and emulsified while maintaining an intact epinuclear shell, which safeguards the fragile posterior capsule. The technique was successfully performed in 62 eyes of 54 patients with posterior polar cataract and grade II-IV nuclear sclerosis. The Chop and Tumble nucleotomy is a safe and effective technique for phacoemulsification in posterior polar cataracts with nuclear sclerosis, where hydrodissection and nuclear rotation are typically avoided.
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  • 文章类型: Journal Article
    聚合表面的蛋白质吸附是一个跨学科的话题,已经在许多方面进行了研究,导致过多的理论,数值和实验洞察力。有各种各样的模型试图准确地捕获吸附的本质及其对蛋白质和聚合物构象的影响。然而,原子模拟是特定情况和计算要求高的。这里,我们通过粗粒(CG)模型探索蛋白质吸附动力学的普遍方面,使我们能够探索各种设计参数的影响。为此,我们对蛋白质采用疏水-极性(HP)模型,将它们均匀地放置在CG聚合物刷的上限处,该聚合物刷的多珠弹簧链被拴在坚固的隐式壁上。我们发现,影响吸附效率的最关键因素似乎是聚合物接枝密度,而蛋白质的大小和疏水性比例也起作用。我们讨论了在存在有吸引力的(朝向蛋白质的亲水部分)珠的情况下,配体和有吸引力的束缚表面对初级吸附以及次级和三元吸附的作用。吸附的百分比和速率,密度分布和蛋白质的形状,与各自的平均力的潜力一起记录,以比较蛋白质吸附过程中的各种情况。
    Protein adsorption by polymerized surfaces is an interdisciplinary topic that has been approached in many ways, leading to a plethora of theoretical, numerical and experimental insight. There is a wide variety of models trying to accurately capture the essence of adsorption and its effect on the conformations of proteins and polymers. However, atomistic simulations are case-specific and computationally demanding. Here, we explore universal aspects of the dynamics of protein adsorption through a coarse-grained (CG) model, that allows us to explore the effects of various design parameters. To this end, we adopt the hydrophobic-polar (HP) model for proteins, place them uniformly at the upper bound of a CG polymer brush whose multibead-spring chains are tethered to a solid implicit wall. We find that the most crucial factor affecting the adsorption efficiency appears to be the polymer grafting density, while the size of the protein and its hydrophobicity ratio come also into play. We discuss the roles of ligands and attractive tethering surfaces to the primary adsorption as well as secondary and ternary adsorption in the presence of attractive (towards the hydrophilic part of the protein) beads along varying spots of the backbone of the polymer chains. The percentage and rate of adsorption, density profiles and the shapes of the proteins, alongside with the respective potential of mean force are recorded to compare the various scenarios during protein adsorption.
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  • 文章类型: Journal Article
    极性生长素运输是高等植物生理学的典型特征,并且多年来已知极性生长素运输的一些主要驱动因素是PIN形成的(PIN)生长素流出蛋白。形成性研究建立了转运系统的许多关键生化特征,并发现了抑制剂,例如1-萘基邻苯二甲酸(NPA),但是PIN的作用机制仍然难以捉摸。这在2022年随着三种PIN蛋白的跨膜结构域的高分辨率结构的发表而改变。原子结构和相关的活性测定表明,PIN使用电梯机制将生长素阴离子运输出细胞。NPA被证明是一种竞争性抑制剂,可将PIN捕获在其向内开放的构象中。PIN蛋白的亲水性细胞质环的秘密仍有待发现。
    Polar auxin transport is a quintessential feature of higher plant physiology and it has been known for many years that some of the primary drivers of polar auxin transport are the PIN-formed (PIN) auxin efflux proteins. Formative research established many key biochemical features of the transport system and discovered inhibitors such as 1-naphthylphthalamic acid (NPA), but the mechanism of action of PINs has remained elusive. This changed in 2022 with the publication of high-resolution structures of the membrane-spanning domains of three PIN proteins. The atomic structures and associated activity assays reveal that PINs use an elevator mechanism to transport auxin anions out of the cell. NPA was shown to be a competitive inhibitor that traps PINs in their inward-open conformation. The secrets of the hydrophilic cytoplasmic loop of PIN proteins remain to be discovered.
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  • 文章类型: Journal Article
    在嵌入球形芯中的偶极子的Stockmayer模型上,为极性分子的第二维里系数及其前两个温度导数开发了表达式。在所考虑的情况下,核心分子根据(m,6)分子间势函数。还包括描述这些量对偶极极化性的依赖性的术语。对于m=9、12、18、24、36和60的情况给出表。这些表可用于计算对极性分子流体的所有热力学性质的第一密度校正。详细讨论了表格的充分性和准确性。
    Expressions are developed for the second virial coefficient and its first two temperature derivatives for polar molecules on the Stockmayer model of a dipole imbedded in a spherical core. In the case considered, the core molecules interact according to an (m, 6) intermolecular potential function. Terms describing the dependence of these quantities on the polarizability of the dipole are also included. Tables are given for the cases m = 9, 12, 18, 24, 36, and 60. These tables can be used to calculate the first density corrections to all of the thermodynamic properties of a fluid of polar molecules. The adequacy and accuracy of the tables are discussed in some detail.
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  • 文章类型: Journal Article
    Studies from cryoenvironments on Earth have demonstrated that microbial life is widespread and have identified microorganisms that are metabolically active and can replicate at subzero temperatures if liquid water is present. However, cryophiles (subzero-growing organisms) often exist in low densities in the environment and their growth rate is low, making them difficult to study. Compounding this, a large number of dormant and dead cells are preserved in frozen settings. Using integrated genomic and activity-based approaches is essential to understanding the cold limits of life on Earth, as well as how cryophilic microorganisms are poised to adapt and metabolize in warming settings, such as in thawing permafrost. An increased understanding of cryophilic lifestyles on Earth will also help inform how (and where) we look for potential microbial life on cold planetary bodies in our solar system such as Mars, Europa, and Enceladus.
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  • 文章类型: Journal Article
    海带海带是极地北极的重要基础物种。波弗特海最大的L.solidungula种群之一发生在StefanssonSound,在阿拉斯加的北海岸。我们调查了StefanssonSoundBoulder斑块中的海带种群,发现与河流输入紧密(3.5km)和浊度增加的近岸地点的孢子体密度(0.36±0.44·m-2)比更多的近海地点(>7km)的孢子体密度更低(0.72±0.48·m-2)和东部(4.72±1.51·m-2)。我们进行了培养实验,以检查盐度和光照对微观孢子体生产的可能综合影响。在低盐度处理(10)中培养的配子体无论光照水平如何都无法产生孢子体。测试的最高光照水平(40µmol光子·m-2·s-1)在盐度为30时产生了最大的孢子体密度(0.037±0.08·mm-2)。随后关于盐度对微观阶段的影响的实验工作表明,单倍体阶段无法在盐度为10时产生孢子体,但3个月大的微观孢子体能够在较低(10和20)盐度处理中持续存在。尽管实蝇孢子体显然已经适应了极端的盐度(<5-33)和光照变化,随着北冰洋淡水输入的时间和幅度的变化,单倍体微观阶段对盐度降低的脆弱性有可能影响未来的种群。
    The kelp Laminaria solidungula is an important foundation species in the circumpolar Arctic. One of the largest populations of L. solidungula in the Beaufort Sea occurs in Stefansson Sound, off the north coast of Alaska. We surveyed kelp populations in the Stefansson Sound Boulder Patch and found that inshore sites in close proximity (3.5 km) to river input and increased turbidity exhibited lower sporophyte densities (0.36 ± 0.44 · m-2 ) than more offshore sites (>7 km) to the west (0.72 ± 0.48 · m-2 ) and east (4.72 ± 1.51 · m-2 ). We performed culture experiments to examine the possible combined effects of salinity and light on microscopic sporophyte production. Gametophytes cultured in the low salinity treatment (10) were unable to produce sporophytes regardless of light level. The highest light level tested (40 µmol photons · m-2  · s-1 ) produced the greatest sporophyte densities (0.037 ± 0.08 · mm-2 ) at a salinity of 30. Subsequent experimental work on the effect of salinity on microscopic stages revealed that haploid stages were not capable of producing sporophytes at a salinity of 10, but 3-month-old microscopic sporophytes were able to persist in the lower (10 and 20) salinity treatments. Although L. solidungula sporophytes have apparently acclimated to extreme salinity (<5-33) and light variations, the vulnerability of haploid microscopic stages to reduced salinity has the potential to affect future populations as the timing and magnitude of freshwater input to the Arctic Ocean changes.
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  • 文章类型: Journal Article
    欧内斯特·沙克尔顿,一个有成就的南极探险家,在1901-4年的发现南极探险期间患上了一种威胁生命的疾病。他记录在案的体征和症状包括因镰刀症引起的牙龈发炎,严重呼吸困难,和锻炼不容忍,在营养缺乏的环境中呈现。稍后进行身体检查,在长期饮食有限的新鲜食物之后,显示有肺收缩期杂音.硫胺素缺乏症伴心肌病,无论是单独或随后加剧了先进的镰刀病,可能是沙克尔顿病情的一个突出原因。
    Ernest Shackleton, an accomplished Antarctic explorer, developed a life-threatening illness during the Discovery Antarctic expedition of 1901-4. His documented signs and symptoms included inflamed gums attributed to scurvy, severe dyspnea, and exercise intolerance, presenting in a setting of nutritional deficiency. Physical examinations at a later date, also following a prolonged diet of limited fresh food, revealed a pulmonary systolic murmur. Thiamine deficiency with cardiomyopathy, either alone or subsequently exacerbated by advanced scurvy, may have been a prominent cause of Shackleton\'s condition.
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