Cotton Fiber

棉纤维
  • 文章类型: Journal Article
    为了确定与棉花纤维强度性状相关的基因,选择了三个不同的棉花品种:海岛棉(新海32号,超长纤维标记为HL),和陆地棉(17-24,长纤维标记为L,和62-33,短纤维标记为S)。选择这些品种来评估具有不同质量的纤维样品。RNA-seq技术用于分析次生细胞壁(SCW)增厚阶段(花后20、25和30天(DPA))棉纤维的表达谱。结果表明,在SCW发育的不同阶段,从三个被评估的棉花品种中获得了大量的差异表达基因(DEGs)。例如,在20DPA,海岛棉(HL)与陆地棉17-24(L)和62-33(S)相比有6,215和5,364度,分别。同时,两个陆地棉品种之间有1236个DEG,17-24(L)和62-33(S)。基因本体论(GO)术语富集确定了42个功能,包括20个生物过程,11个细胞成分,和11个分子功能。京都基因和基因组百科全书(KEGG)富集分析确定了参与SCW合成和增稠的几种途径,如糖酵解/糖异生,半乳糖代谢,丙酸代谢,不饱和脂肪酸的生物合成途径,缬氨酸,亮氨酸和异亮氨酸降解,脂肪酸延伸途径,和植物激素信号转导。通过共享DEG的识别,发现46个DEGs在三个棉花品种的不同纤维阶段表现出相当大的表达差异。这些共享的DEG具有包括氧化还原酶在内的功能,结合蛋白,水解酶(如GDSL硫酯酶),转移酶,金属蛋白(细胞染色质样基因),激酶,碳水化合物,和转录因子(MYB和WRKY)。因此,进行RT-qPCR以验证46个鉴定的DEGs中的9个的表达水平,一种证明RNA-seq数据可靠性的方法。我们的结果为阐明棉花纤维发育过程中SCW生物合成的细胞生物学提供了宝贵的分子资源。
    To determine the genes associated with the fiber strength trait in cotton, three different cotton cultivars were selected: Sea Island cotton (Xinhai 32, with hyper-long fibers labeled as HL), and upland cotton (17-24, with long fibers labeled as L, and 62-33, with short fibers labeled as S). These cultivars were chosen to assess fiber samples with varying qualities. RNA-seq technology was used to analyze the expression profiles of cotton fibers at the secondary cell wall (SCW) thickening stage (20, 25, and 30 days post-anthesis (DPA)). The results showed that a large number of differentially expressed genes (DEGs) were obtained from the three assessed cotton cultivars at different stages of SCW development. For instance, at 20 DPA, Sea Island cotton (HL) had 6,215 and 5,364 DEGs compared to upland cotton 17-24 (L) and 62-33 (S), respectively. Meanwhile, there were 1,236 DEGs between two upland cotton cultivars, 17-24 (L) and 62-33 (S). Gene Ontology (GO) term enrichment identified 42 functions, including 20 biological processes, 11 cellular components, and 11 molecular functions. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis identified several pathways involved in SCW synthesis and thickening, such as glycolysis/gluconeogenesis, galactose metabolism, propanoate metabolism, biosynthesis of unsaturated fatty acids pathway, valine, leucine and isoleucine degradation, fatty acid elongation pathways, and plant hormone signal transduction. Through the identification of shared DEGs, 46 DEGs were found to exhibit considerable expressional differences at different fiber stages from the three cotton cultivars. These shared DEGs have functions including REDOX enzymes, binding proteins, hydrolases (such as GDSL thioesterase), transferases, metalloproteins (cytochromatin-like genes), kinases, carbohydrates, and transcription factors (MYB and WRKY). Therefore, RT-qPCR was performed to verify the expression levels of nine of the 46 identified DEGs, an approach which demonstrated the reliability of RNA-seq data. Our results provided valuable molecular resources for clarifying the cell biology of SCW biosynthesis during fiber development in cotton.
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  • 文章类型: Journal Article
    背景跨侧裂法是治疗多种血管的主要方法之一,肿瘤,和颅底病变.Sylvian裂有许多关键结构,包括大脑中动脉和许多静脉结构。如果做得不好,跨侧突入法可能会导致多种并发症。到目前为止,没有简单的训练模型来进行Sylvian裂隙解剖。在这篇文章中,我们描述了使用微剪刀尖锐解剖蛛网膜小梁的技术。我们还提出了一种使用带有棉纤维的三维(3D)脑模型进行Sylvian蛛网膜解剖的新模型。材料与方法我们将棉纤维插入大脑模型的Sylvian裂隙(来自Upsurgeon的动脉瘤盒)中,并用棉片覆盖Sylvian裂隙,然后把水喷在上面。我们在显微镜下使用右手的神山剪刀和左手的吸力解剖了这个模型。结果在显微镜下,我们的模型看起来与真实的Sylvian裂缝相当.我们可以用这个模型用神山剪刀进行蛛网膜解剖。结论利用带有棉纤维的三维脑模型建立蛛网膜夹层模型是一种简化和新颖的方法。
    Background  Transsylvian approach is one of the main approaches for a variety of vascular, tumor, and skull-base lesions. Sylvian fissure harbors a lot of critical structures including the middle cerebral artery and many venous structures. If not done properly, the transsylvian approach could cause several complications. Up to now, there is no simple training model for practicing Sylvian fissure dissection. In this article, we describe the technique of using microscissors for the sharp dissection of arachnoid trabeculae. We also propose a new model for practicing Sylvian arachnoid dissection using a three-dimensional (3D) brain model with cotton fiber. Materials and Method  We inserted cotton fiber into the Sylvian fissure of the brain model (aneurysm box from UpsurgeOn) and covered the Sylvian fissure with a cotton sheet, then sprayed the water over it. We dissected this model under a microscope by using Kamiyama scissors in the right hand and suction in the left hand. Result  Under the microscope, our model appears comparable with the real Sylvian fissure. We can use this model for practicing arachnoid dissection with Kamiyama scissors. Conclusion  The arachnoid dissection model by using a 3D brain model with cotton fiber is a simplified and novel approach for practicing the Sylvian fissure dissection.
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  • 文章类型: Journal Article
    胞浆是嵌入细胞壁内的跨膜通道,可以促进植物细胞间的通讯。与纤丝结合的纤丝结合蛋白(PDCB)有助于细胞壁延伸。鉴于棉纤维细胞的伸长与细胞壁的动力学相关,这种蛋白质可以与棉纤维的伸长有关。这项研究试图鉴定棉属中的PDCB家族成员。hirsutum基因组并阐明其表达谱。通过鉴定和筛选过程共观察到45个不同的家族成员。对其理化性质的分析揭示了大多数成员的氨基酸组成和分子量的相似性。系统发育分析促进了进化树的构建,将这些成员分为五组,主要分布在20条染色体上。精细的映射结果促进了第V组的组织特异性检查,显示GhPDCB9的表达水平在开花后五天达到峰值。VIGS实验导致基因表达水平显著下降,成熟纤维长度显著减少,平均缩短1.43-4.77毫米。结果表明,GhPDCB9在棉花纤维发育中起着举足轻重的作用,是提高棉花产量的候选材料。
    Plasmodesmata are transmembrane channels embedded within the cell wall that can facilitate the intercellular communication in plants. Plasmodesmata callose-binding (PDCB) protein that associates with the plasmodesmata contributes to cell wall extension. Given that the elongation of cotton fiber cells correlates with the dynamics of the cell wall, this protein can be related to the cotton fiber elongation. This study sought to identify PDCB family members within the Gossypium. hirsutum genome and to elucidate their expression profiles. A total of 45 distinct family members were observed through the identification and screening processes. The analysis of their physicochemical properties revealed the similarity in the amino acid composition and molecular weight across most members. The phylogenetic analysis facilitated the construction of an evolutionary tree, categorizing these members into five groups mainly distributed on 20 chromosomes. The fine mapping results facilitated a tissue-specific examination of group V, revealing that the expression level of GhPDCB9 peaked five days after flowering. The VIGS experiments resulted in a marked decrease in the gene expression level and a significant reduction in the mature fiber length, averaging a shortening of 1.43-4.77 mm. The results indicated that GhPDCB9 played a pivotal role in the cotton fiber development and served as a candidate for enhancing cotton yield.
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  • 文章类型: Journal Article
    ω-3脂肪酸去饱和酶基因FAD3负责在植物脂肪酸合成中将亚油酸转化为亚麻酸。尽管对其在棉花生长中的作用了解有限,我们的研究集中在GhFAD3-4,FAD3家族中的一个基因,发现这可以促进棉花的纤维伸长和细胞壁厚度。GhFAD3-4主要在伸长纤维中表达,其抑制导致较短的纤维,细胞壁厚度降低,磷酸肌醇(PI)和三磷酸肌醇(IP3)水平降低。GhFAD3-4敲除突变体的转录组分析揭示了对参与磷酸肌醇信号通路的基因的显著影响。实验证据表明,GhFAD3-4正调控GhBoGH3B和GhPIS基因的表达,通过肌醇信号通路影响棉纤维发育。在GhFAD3-4敲除植物中应用PI和IP6外部增加纤维长度,而抑制PI导致GhFAD3-4过表达植物的纤维长度减少。这些发现表明GhFAD3-4通过促进PI和IP3的生物合成在促进纤维发育中起着至关重要的作用。为培育纤维品质优良的棉花品种提供了潜力。
    The omega-3 fatty acid desaturase enzyme gene FAD3 is responsible for converting linoleic acid to linolenic acid in plant fatty acid synthesis. Despite limited knowledge of its role in cotton growth, our study focused on GhFAD3-4, a gene within the FAD3 family, which was found to promote fiber elongation and cell wall thickness in cotton. GhFAD3-4 was predominantly expressed in elongating fibers, and its suppression led to shorter fibers with reduced cell wall thickness and phosphoinositide (PI) and inositol triphosphate (IP3) levels. Transcriptome analysis of GhFAD3-4 knock-out mutants revealed significant impacts on genes involved in the phosphoinositol signaling pathway. Experimental evidence demonstrated that GhFAD3-4 positively regulated the expression of the GhBoGH3B and GhPIS genes, influencing cotton fiber development through the inositol signaling pathway. The application of PI and IP6 externally increased fiber length in GhFAD3-4 knock-out plants, while inhibiting PI led to a reduced fiber length in GhFAD3-4 overexpressing plants. These findings suggest that GhFAD3-4 plays a crucial role in enhancing fiber development by promoting PI and IP3 biosynthesis, offering the potential for breeding cotton varieties with superior fiber quality.
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  • 文章类型: Journal Article
    背景:医用敷料旨在促进伤口愈合并减少感染。本项目旨在研究天然棕色棉敷料对大肠杆菌感染创面愈合的影响。
    方法:在本研究中,以脱脂白色棉纱布为对照组,以脱脂棕色棉纱布和脱脂漂白棕色棉纱布作为实验1组和实验2组,通过建立以大肠杆菌为感染生物的大鼠感染创面模型,探讨其对动物感染后创面损伤的修复效果。
    结果:通过分析伤口愈合状况,研究了促进感染伤口愈合的能力,宏观伤口愈合率,苏木精-伊红染色,Masson染色,用Elisa法检测炎症因子的分泌情况。结果显示在伤口愈合的第14天,3组敷料的宏观创面愈合率均大于98%;实验组1的胶原含量达到49.85±5.84%,实验组2的胶原含量达到53.48±5.32%,高于对照组;棕色棉纱布通过缩短炎症期来促进皮肤创面愈合。三种炎症因子THF-α的表达,IL-2、IL-8和三种细胞因子MMP-3、MMP-8、MMP-9均低于对照组。
    结论:天然棕色棉纱布对感染创面有较好的修复和促进愈合作用。开辟了天然棕色棉纱布在沾染创面医治中的运用。
    BACKGROUND: Medical dressings are designed to promote wound healing and reduce infection. The aim of project is to investigate the effect of natural brown colored cotton dressings on the healing of infected wounds in E.coli animals.
    METHODS: In this study, degreased white cotton gauze was used as the control group, with degreased brown cotton gauze and degreased bleached brown cotton gauze as the experimental group 1 and experimental group 2, to investigate the effect on the repair of post-infectious wound damage in animals by establishing an infected wound model in rats with E.coli as the infecting organism.
    RESULTS: The ability to promote healing of infected wounds was investigated by analyzing the wound healing status, macroscopic wound healing rate, hematoxylin-eosin staining, Masson staining, secretion of inflammatory factors by Elisa assay. The result showed that at day 14 of wound healing, the macroscopic wound healing rate was greater than 98% for all three groups of dressings; the collagen content reached 49.85 ± 5.84% in the experimental group 1 and 53.48 ± 5.32% in the experimental group 2, which was higher than the control group; brown cotton gauze promotes skin wound healing by shortening the inflammatory period in both groups. The expression of three inflammatory factors THF-α, IL-2, and IL-8 and three cytokines MMP-3, MMP-8, and MMP-9 were lower than that of the control group.
    CONCLUSIONS: It was found that natural brown cotton gauze has better repairing and promoting healing effect on infected wounds. It opens up the application of natural brown cotton gauze in the treatment of infected wounds.
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  • 文章类型: Journal Article
    细胞分裂素氧化酶/脱氢酶(CKX),负责不可逆的细胞分裂素降解,还控制植物的生长和发育以及对非生物胁迫的反应。虽然CKX基因已在其他植物中广泛研究,它在棉花中的功能仍然未知。因此,使用转录组学进行了一项全基因组研究,以鉴定四种棉花中的CKX基因家族,实时定量PCR(qRT-PCR)和生物信息学。因此,在G.hirsutum和G.barbadense(四倍体棉种)中,分别有87个和96个CKX基因和62个基因,已确定。根据进化研究,棉花CKX基因家族分为五个不同的亚家族。据观察,棉花中的CKX基因具有保守的序列标志,基因家族的扩展是由于分段复制或全基因组复制(WGD)。共线性和多重同质性研究表明,进化过程中基因家族的扩展和纯化选择压力已经施加。G.hirsutumCKX基因显示多个外显子/内含子,染色体分布不均,保守的蛋白质基序,以及与启动子区域的生长和胁迫相关的顺式元件。与电阻相关的顺式元素,在CKX基因的启动子区域内鉴定了生理代谢和激素调节。不同应力条件下的表达式分析(冷、热,干旱和盐)在不同组织中显示出不同的表达方式。通过病毒诱导的基因沉默(VIGS),发现GhCKX34A基因通过调节抗氧化相关活性来提高抗寒性。由于GhCKX29A在纤维发育过程中高度表达,我们假设GhCKX29A在纤维中的表达增加对纤维伸长有显著影响。因此,这些结果有助于我们理解GhCKXs参与纤维发育和对非生物胁迫的反应。
    Cytokinin oxidase/dehydrogenase (CKX), responsible for irreversible cytokinin degradation, also controls plant growth and development and response to abiotic stress. While the CKX gene has been studied in other plants extensively, its function in cotton is still unknown. Therefore, a genome-wide study to identify the CKX gene family in the four cotton species was conducted using transcriptomics, quantitative real-time PCR (qRT-PCR) and bioinformatics. As a result, in G. hirsutum and G. barbadense (the tetraploid cotton species), 87 and 96 CKX genes respectively and 62 genes each in G. arboreum and G. raimondii, were identified. Based on the evolutionary studies, the cotton CKX gene family has been divided into five distinct subfamilies. It was observed that CKX genes in cotton have conserved sequence logos and gene family expansion was due to segmental duplication or whole genome duplication (WGD). Collinearity and multiple synteny studies showed an expansion of gene families during evolution and purifying selection pressure has been exerted. G. hirsutum CKX genes displayed multiple exons/introns, uneven chromosomal distribution, conserved protein motifs, and cis-elements related to growth and stress in their promoter regions. Cis-elements related to resistance, physiological metabolism and hormonal regulation were identified within the promoter regions of the CKX genes. Expression analysis under different stress conditions (cold, heat, drought and salt) revealed different expression patterns in the different tissues. Through virus-induced gene silencing (VIGS), the GhCKX34A gene was found to improve cold resistance by modulating antioxidant-related activity. Since GhCKX29A is highly expressed during fibre development, we hypothesize that the increased expression of GhCKX29A in fibres has significant effects on fibre elongation. Consequently, these results contribute to our understanding of the involvement of GhCKXs in both fibre development and response to abiotic stress.
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  • 文章类型: Journal Article
    棉花(GossypiumhirsutumL.)是全球主要的可再生纤维作物,然而,由于基因型特异性性状和品种之间复杂的相互作用,其产量和纤维质量显示出高变异性,管理实践和环境因素。由于建立基因库狭窄,现代育种实践可能会限制未来的产量增长。精准育种和生物技术方法提供了潜在的解决方案,取决于准确的品种特异性数据。在这里,我们通过为三个现代棉花品种(\'UGA230\',\'UA48\'和\'CSX8308\')并更新\'TM-1\'棉花遗传标准参考。尽管假设遗传一致性,在四个基因组中观察到相当大的序列和结构变异,与来自“皮马”棉花的古老和正在进行的基因组渗入重叠,基因调控机制和表型性状差异。跨纤维发育的差异表达基因与纤维生产相关,可能有助于在现代棉花品种中观察到的独特的纤维品质性状。这些基因组和比较分析为未来提高全球棉花产量和可持续性的遗传努力提供了宝贵的基础。
    Cotton (Gossypium hirsutum L.) is the key renewable fibre crop worldwide, yet its yield and fibre quality show high variability due to genotype-specific traits and complex interactions among cultivars, management practices and environmental factors. Modern breeding practices may limit future yield gains due to a narrow founding gene pool. Precision breeding and biotechnological approaches offer potential solutions, contingent on accurate cultivar-specific data. Here we address this need by generating high-quality reference genomes for three modern cotton cultivars (\'UGA230\', \'UA48\' and \'CSX8308\') and updating the \'TM-1\' cotton genetic standard reference. Despite hypothesized genetic uniformity, considerable sequence and structural variation was observed among the four genomes, which overlap with ancient and ongoing genomic introgressions from \'Pima\' cotton, gene regulatory mechanisms and phenotypic trait divergence. Differentially expressed genes across fibre development correlate with fibre production, potentially contributing to the distinctive fibre quality traits observed in modern cotton cultivars. These genomes and comparative analyses provide a valuable foundation for future genetic endeavours to enhance global cotton yield and sustainability.
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  • 文章类型: Journal Article
    结论:基于贝叶斯连锁不平衡的多位点混合模型确定了纤维的QTL,种子和油性状以及测试品系的预测育种价值,使他们同时改善棉花。在继续繁殖以获得更高的皮棉产量的同时,提高棉籽和油的产量变得越来越重要。在这项研究中,一种新的基于贝叶斯连锁不平衡的多基因座混合模型被开发用于QTL识别和基因组预测(GP)。由256个重组自交系组成的多亲群体,来自四个具有不同性状组合的优良品种,用于皮棉百分比的QTL分析,种子指数,皮棉指数和种子油含量及其相互关系。所有四个性状均具有中等遗传性和相关性,但在多个季节中对基因型×环境相互作用的影响不大。对于每个性状,确定了7到10个主要QTL,对于不同的性状对,许多QTL是相邻或重叠的。模型的五倍交叉验证表明预测精度为0.46-0.62。基于任何两个季节表型的GP结果与三个季节实验的汇总分析的表型平均值密切相关(r=0.83-0.92)。当用于选择棉绒的改进时,种子和油的产量,GP捕获了40-100%的个体,其皮棉产量与根据三季表型结果选择的个体相当。因此,这种定量基因组学的方法不仅可以破译皮棉潜在的基因组变异,种子和种子油性状及其相互关系,但可以为它们的同步改进提供预测。我们讨论了棉花未来的育种策略,这些策略将提高作物的整体价值,不仅仅是它的纤维。
    CONCLUSIONS: A Bayesian linkage disequilibrium-based multiple-locus mixed model identified QTLs for fibre, seed and oil traits and predicted breeding worthiness of test lines, enabling their simultaneous improvement in cotton. Improving cotton seed and oil yields has become increasingly important while continuing to breed for higher lint yield. In this study, a novel Bayesian linkage disequilibrium-based multiple-locus mixed model was developed for QTL identification and genomic prediction (GP). A multi-parent population consisting of 256 recombinant inbred lines, derived from four elite cultivars with distinct combinations of traits, was used in the analysis of QTLs for lint percentage, seed index, lint index and seed oil content and their interrelations. All four traits were moderately heritable and correlated but with no large influence of genotype × environment interactions across multiple seasons. Seven to ten major QTLs were identified for each trait with many being adjacent or overlapping for different trait pairs. A fivefold cross-validation of the model indicated prediction accuracies of 0.46-0.62. GP results based on any two-season phenotypes were strongly correlated with phenotypic means of a pooled analysis of three-season experiments (r = 0.83-0.92). When used for selection of improvement in lint, seed and oil yields, GP captured 40-100% of individuals with comparable lint yields of those selected based on the three-season phenotypic results. Thus, this quantitative genomics-enabled approach can not only decipher the genomic variation underlying lint, seed and seed oil traits and their interrelations, but can provide predictions for their simultaneous improvement. We discuss future breeding strategies in cotton that will enhance the entire value of the crop, not just its fibre.
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  • 文章类型: Journal Article
    细菌的抗生素抗性的增加增加了对具有独特抗菌作用机制的材料研究的科学兴趣。本文介绍了碳材料和用其装饰的纺织品的抗菌活性研究结果。氧化石墨烯的杀菌和杀菌活性的比较分析,电化学剥离多层石墨烯,碳点,他们的组合被执行。大肠杆菌参考菌株的微生物学研究,金黄色葡萄球菌,和白色念珠菌表明,氧化石墨烯抑制生长的效率高达98%。电化学剥离的多石墨烯效率较低(高达40%)。这项研究发现碳点没有明显的抗菌活性,碳点与氧化石墨烯的结合显着削弱了它们的有效性。然而,电化学剥离的多石墨烯和碳点的组合表现出协同效应(高达76%)。对装饰棉纺织品的抗菌活性的研究证明了氧化石墨烯抗菌纺织品的有效性,电化学剥离多层石墨烯,以及碳点与电化学剥离的多层石墨烯的组合。
    The rise in the antibiotic resistance of bacteria has increased scientific interest in the study of materials with unique mechanisms of antimicrobial action. This paper presents the results of studies on the antimicrobial activity of carbon materials and textiles decorated with them. A comparative analysis of the bactericidal and fungicidal activities of graphene oxide, electrochemically exfoliated multigraphene, carbon dots, and their combinations was performed. Microbiological studies on reference strains of E. coli, S. aureus, and C. albicans showed that graphene oxide inhibited growth with up to 98% efficiency. Electrochemically exfoliated multigraphene was less effective (up to 40%). This study found no significant antimicrobial activity of carbon dots and the combination of carbon dots with graphene oxide significantly weakened their effectiveness. However, the combination of electrochemically exfoliated multigraphene and carbon dots exhibits a synergistic effect (up to 76%). A study on the antimicrobial activity of decorated cotton textiles demonstrated the effectiveness of antimicrobial textiles with graphene oxide, electrochemically exfoliated multigraphene, and a combination of carbon dots with electrochemically exfoliated multigraphene.
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  • 文章类型: Journal Article
    棉花(GossypiumbarbadenseL.)是全球领先的纤维和油料作物,但是育种材料之间的遗传多样性通常是有限的。这项研究分析了来自埃及和其他国家的14种棉花基因型的遗传变异,包括栽培品种和野生类型,利用农业形态性状和基因组SSR标记。进行了两个季节的田间试验,以评估与植物生长相关的12个关键性状,产量组件,和纤维质量。分子多样性分析利用10个SSR引物产生DNA谱。分子多样性分析利用10个SSR引物来产生DNA谱。数据显示形态性状差异很大,埃及基因型通常表现出更高的营养生长和产量参数。产量表现最好的基因型是吉萨96,吉萨94和大黑铃基因型,而吉萨96、吉萨92和吉萨70的纤维长度排名最高,力量,和细度。相比之下,分子谱在所有基因型中都是高度多态性的,包括212个中82.5%的多态性带。SSR标记的多态性信息含量较高,范围从0.76到0.86。基于SSR数据的遗传相似性系数在0.58至0.91之间变化很大,聚类分析根据地理来源将基因型分为两个主要群体。棉花基因型在形态和遗传上表现出高度的多样性,表明种质有足够的变异性。物理性状和分子标记的结合使用使人们对埃及和全球棉花品种之间的遗传多样性和关系有了透彻的了解。SSR标记可以有效地分析基因型,并可以通过杂交和标记辅助育种帮助选择理想的亲本来增强棉花。
    Cotton (Gossypium barbadense L.) is a leading fiber and oilseed crop globally, but genetic diversity among breeding materials is often limited. This study analyzed genetic variability in 14 cotton genotypes from Egypt and other countries, including both cultivated varieties and wild types, using agro-morphological traits and genomic SSR markers. Field experiments were conducted over two seasons to evaluate 12 key traits related to plant growth, yield components, and fiber quality. Molecular diversity analysis utilized 10 SSR primers to generate DNA profiles. The Molecular diversity analysis utilized 10 SSR primers to generate DNA profiles. Data showed wide variation for the morphological traits, with Egyptian genotypes generally exhibiting higher means for vegetative growth and yield parameters. The top-performing genotypes for yield were Giza 96, Giza 94, and Big Black Boll genotypes, while Giza 96, Giza 92, and Giza 70 ranked highest for fiber length, strength, and fineness. In contrast, molecular profiles were highly polymorphic across all genotypes, including 82.5% polymorphic bands out of 212. Polymorphism information content was high for the SSR markers, ranging from 0.76 to 0.86. Genetic similarity coefficients based on the SSR data varied extensively from 0.58 to 0.91, and cluster analysis separated genotypes into two major groups according to geographical origin. The cotton genotypes displayed high diversity in morphology and genetics, indicating sufficient variability in the germplasm. The combined use of physical traits and molecular markers gave a thorough understanding of the genetic diversity and relationships between Egyptian and global cotton varieties. The SSR markers effectively profiled the genotypes and can help select ideal parents for enhancing cotton through hybridization and marker-assisted breeding.
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