South America

南美洲
  • 文章类型: Journal Article
    背景:UnenlagiineParavians是与了解鸟类起源最相关的冈瓦南兽脚类恐龙进化枝之一,然而他们的化石记录仍然不完整,大多数分类单元由零碎的材料代表和/或由漫长的时间间隙隔开,令人沮丧的尝试来表征unenlagiine进化。
    结论:在这里,我们描述了滴芩石斑原。等sp.11月。,来自巴塔哥尼亚北部内乌肯省内乌肯盆地上白垩纪(Santonian)BajodelaCarpa组的一个新的unenlagiine分类群,阿根廷填补了这些兽脚类动物化石记录中巨大的地层空白。尽管仅从非常不完整的颅后骨骼中得知,潜琴保存的骨骼与其他unlagiines中的相应元素不同,为建立新的分类单元辩护。此外,在几个形态学方面,Diuqin的肱骨似乎介于Neuquén盆地地质上较旧的unlagiines的肱骨之间(例如,Unenlagiaspp.来自Turonian-ConiacianPortezuelo组)和地层较年轻的地层,来自坎帕尼亚-马斯特里赫蒂艾伦编队的体形较大的澳大利亚探险家卡巴扎。因此,新分类群的形态似乎表明了unenlagiine进化的过渡阶段。系统发育分析将吊琴恢复为具有多个合理系统位置的副鸟,但与Unenlagiinae的亲和力最强。新形式的肱骨在其远端附近表现出亚圆形穿刺,被解释为最有可能由锥形齿状的鳄鱼形留下的进食痕迹,哺乳动物,或者兽脚类,后者可能对应于megaraptorid或另一个unenlagiine个体。因此,除了填补Unenlagiine进化史中重要的形态和时间空白之外,新的分类单元还提供了与这些兽脚类动物的古生态学有关的信息。
    BACKGROUND: Unenlagiine paravians are among the most relevant Gondwanan theropod dinosaur clades for understanding the origin of birds, yet their fossil record remains incomplete, with most taxa being represented by fragmentary material and/or separated by lengthy temporal gaps, frustrating attempts to characterize unenlagiine evolution.
    CONCLUSIONS: Here we describe Diuqin lechiguanae gen. et sp. nov., a new unenlagiine taxon from the Upper Cretaceous (Santonian) Bajo de la Carpa Formation of the Neuquén Basin of Neuquén Province in northern Patagonia, Argentina that fills a substantial stratigraphic gap in the fossil record of these theropods. Although known only from a very incomplete postcranial skeleton, the preserved bones of Diuqin differ from corresponding elements in other unenlagiines, justifying the erection of the new taxon. Moreover, in several morphological aspects, the humerus of Diuqin appears intermediate between those of geologically older unenlagiines from the Neuquén Basin (e.g., Unenlagia spp. from the Turonian-Coniacian Portezuelo Formation) and that of the stratigraphically younger, larger-bodied Austroraptor cabazai from the Campanian-Maastrichtian Allen Formation. Consequently, the morphology of the new taxon appears to indicate a transitional stage in unenlagiine evolution. Phylogenetic analysis recovers Diuqin as a paravian with multiple plausible systematic positions, but the strongest affinity is with Unenlagiinae. The humerus of the new form exhibits subcircular punctures near its distal end that are interpreted as feeding traces most likely left by a conical-toothed crocodyliform, mammal, or theropod, the latter potentially corresponding to a megaraptorid or another unenlagiine individual. Thus, in addition to filling important morphological and temporal gaps in unenlagiine evolutionary history, the new taxon also offers information relating to the paleoecology of these theropods.
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  • 文章类型: Journal Article
    背景:对气候生态位演变的兴趣,特别是在理解气候变化下物种的潜在适应性反应方面,在理论上和宏观生态学研究中都有所增加。这些研究为物种的气候特征如何影响其生态位进化提供了有价值的见解。在这项研究中,我们的目的是调查生态位保守主义是否在Nymphaea的物种多样化中起作用,一类具有世界性分布的水生植物,正面临严重的栖息地丧失。我们将使用23个物种的气候模型和系统发育数据来重建Nymphaea的生态位进化,测量生态位重叠,并在测试进化模型时评估随时间的差异。
    结果:在群体内部和群体之间的生态位都有很多重叠,特别是在许多地方都能找到的物种。生态位分布的宽度和峰值取决于生物气候变量,这表明该物种以不同的方式进化以应对气候变化。分析还表明,整个系统发育发生了进化变化,具有弱到中等的信号。形态差异指数(MDI)值表明,随着时间的推移,子分化中存在差异,但在它们之间或之间没有差异。生态位重建和进化分析揭示了各种变量之间的收敛和发散进化。例如,N.不变的,N.atrans,N.Violancea,和N.nouchali进化到bio2和bio3的中间温度(等温线),而bio8和bio9的极端温度(最潮湿和最干燥的季度平均温度)。
    结论:我们的研究将提高我们对气候生态位的变化如何潜在驱动Nymphaea进化的理解。它对极限具有重大的科学意义,组合,进化,物种多样化。这些信息对于正在进行的保护和管理工作至关重要,特别是考虑到气候变化的不可避免的影响。
    BACKGROUND: Interest in the evolution of climatic niches, particularly in understanding the potential adaptive responses of species under climate change, has increased both theoretically and within macroecological studies. These studies have provided valuable insights into how climatic traits of species influence their niche evolution. In this study, we aim to investigate whether niche conservatism plays a role in the species diversification of Nymphaea, a group of aquatic plants with a cosmopolitan distribution that is facing severe habitat loss. We will use climatic models and phylogenetic data for 23 species to reconstruct Nymphaea\'s niche evolution, measure niche overlap, and assess disparity through time while testing for evolutionary models.
    RESULTS: There was a lot of overlap in niches both within and between groups, especially for species that can be found in many places. The breadth and peaks of the niche profile varied depending on the bioclimatic variables, which suggested that the species evolved differently to cope with changes in climate. The analysis also showed that evolutionary changes happened across the phylogeny, with weak to moderate signals. The morphological disparity index (MDI) values indicated that there were disparities within subclades over time but not between or among them. Niche reconstruction and evolution analysis revealed both convergent and divergent evolution among various variables. For example, N. immutabilis, N. atrans, N. violancea, and N. nouchali evolved towards intermediate temperatures for bio2 and bio3 (isothermity) while moving towards extreme temperatures for bio8 and bio9 (wettest and driest average quarterly temperatures).
    CONCLUSIONS: Our study will improve our understanding of how changes in climatic niches are potentially driving the evolution of Nymphaea. It has significant scientific implications for the limits, assemblages, evolution, and diversification of species. This information is crucial for the ongoing efforts of conservation and management, particularly considering the inevitable effects of climate change.
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  • 文章类型: Journal Article
    Phthorimaea operculella is a major potato pest of global importance, early warning and detection of which are of significance. In this study, we analyzed the climate niche conservation of P. operculella during its invasion by comparing the overall climate niche from three dimensions, including the differences between native range (South America) and entire invaded region (excluding South America), the differences bwtween native range (South America) and five invaded continents (North America, Oceania, Asia, Africa, and Europe), as well as the differences between native region (South America) and an invaded region (China). We constructed ecological niche models for its native range (South America) and invaded region (China). The results showed that the climatic niche of the pest has expanded to varying degrees in different regions, indicating that the pest could well adapt to new environments during the invasion. Almost all areas of South America are suitable for P. operculella. In China, its suitable area is mainly concentrated in Shandong, Hebei, Tianjin, Beijing, Henan, Hubei, Yunnan, Guizhou, Sichuan, Hainan, northern Guangxi, southern Hunan, Anhui, Guangdong, Jiangsu, southern Shanxi, and southern Shaanxi. With increasing greenhouse gas emissions and global temperature, its suitable area will decrease at low latitude and increase gradually at high latitude. Specifically, the northern boundary will extend to Liaoning, Jilin, and the southeastern region of Inner Mongolia, while the western boundary extends to Sichuan and the southeast Qinghai-Tibet Plateau. The suitable area in the southeast Yunnan-Guizhou Plateau, Hainan Island, and the south of Yangtze River, will gradually decrease. The total suitable habitat area for P. operculella in China is projected to increase under future climate condition. From 2081 to 2100, under the three greenhouse gas emissions scenarios of ssp126, ssp370, and ssp585, the suitable area is expected to increase by 27.78, 165.54, and 140.41 hm2, respectively. Therefore, it is crucial to strengtehen vigilance and implement strict measures to prevent the further expansion of P. operculella.
    马铃薯块茎蛾是一种全球性检疫害虫,也是马铃薯的主要害虫,对其进行早期预警和检测非常重要。本研究从3个维度,即原产地南美洲与整个入侵地(以除南美洲以外的所有分布地为整体)之间、原产地南美洲与5个入侵大洲(北美洲、大洋洲、亚洲、非洲和欧洲)之间、原产地南美洲与入侵地中国之间的气候生态位变化,分析了马铃薯块茎蛾在入侵期间的气候生态位保守性,并构建了该害虫在当前和未来气候情景下在其原产地和入侵地(中国)的生态位模型。结果表明: 该害虫的气候生态位在上述地区均发生了不同程度的扩张,说明该害虫在入侵过程中能适应新的入侵地环境。马铃薯块茎蛾的适生区几乎遍布整个南美州;在中国,其适生区主要集中在山东、河北、天津、北京、河南、湖北、云南、贵州、四川、海南、广西北部、湖南南部、安徽、广东、江苏、山西和陕西的南部,随着温室气体排放浓度增加,全球气温升高,其适生区将在低纬度地区减少,逐渐向高纬度地区扩展,具体表现为:北部向辽宁、吉林、内蒙古东南部扩展,西部向四川及青藏高原东南部延伸,而云贵高原东南部、海南岛及长江以南等地区的适生区逐渐减少。与当前气候条件相比,未来气候条件下我国马铃薯块茎蛾适生区总面积呈增加趋势,在2081—2100年,在ssp126、ssp370和ssp585 3种温室气体排放情景下,其适生区面积分别增加27.78、165.54、140.41 hm2。因此,迫切需要提高警惕,严防马铃薯块茎蛾危害的进一步扩展。.
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  • 文章类型: Journal Article
    对病理化石骨骼的研究提高了生理学和生态学的知识,以及灭绝生物的生活史。在灭绝的脊椎动物中,非鸟类恐龙在病理学证据方面引起了人们的注意,因为在这些古老的生物中发现了各种各样的化石病变和疾病。这里,我们评估了在不同brachyyrostran个体中观察到的病理状况(Theropoda,Abelisauridae)类群,包括Aucasaurusgarridoi,Elemgasemnubilus,和Quilmesauruscurriei。为此,我们使用多种方法,如组织学和计算机断层扫描,除了宏观评价。Aucasaurus的整体型显示出发育过程中椎骨分割失败的几种病理特征,导致两个融合的尾椎的存在。在Aucasaurus中发生这种情况是迄今为止在非tetanuran兽脚类动物中记录的第一例。关于Elemgasem的整型,两个融合椎骨的组织学显示中心之间的椎间空间,因此,融合仅限于关节表面的远端边缘。这种病理在这里被认为是脊柱关节病,第一个证据是非翼虎兽脚类。Quilmesaurus的右胫骨的微观结构排列显示出外皮层的一部分有明显的变化,可能是由于放射状纤维板层骨组织的存在。尽管在其他已灭绝的脊椎动物中也存在类似的骨组织,并且其形成的原因仍存在争议,可能是对某种病理的反应.在非鸟类兽脚类动物中,创伤性损伤比其他疾病更好地表现(例如,感染,先天性或代谢性疾病,等。).这些病变主要在大型兽脚类动物中恢复,例如Abelisauridae,异龙科,卡甲齿科,和霸王科,并且主要分布在轴向元件之间。对这些兽脚类进化枝的伤害分布的统计测试表明,分类群病理之间存在很强的关联,身体区域-病理学,和分类群-身体区域,提示不同的生活方式和行为可能是兽脚类动物中不同伤害频率的基础。
    Studies on pathological fossil bones have allowed improving the knowledge of physiology and ecology, and consequently the life history of extinct organisms. Among extinct vertebrates, non-avian dinosaurs have drawn attention in terms of pathological evidence, since a wide array of fossilized lesions and diseases were noticed in these ancient organisms. Here, we evaluate the pathological conditions observed in individuals of different brachyrostran (Theropoda, Abelisauridae) taxa, including Aucasaurus garridoi, Elemgasem nubilus, and Quilmesaurus curriei. For this, we use multiple methodological approaches such as histology and computed tomography, in addition to the macroscopic evaluation. The holotype of Aucasaurus shows several pathognomonic traits of a failure of the vertebral segmentation during development, causing the presence of two fused caudal vertebrae. The occurrence of this condition in Aucasaurus is the first case to be documented so far in non-tetanuran theropods. Regarding the holotype of Elemgasem, the histology of two fused vertebrae shows an intervertebral space between the centra, thus the fusion is limited to the distal rim of the articular surfaces. This pathology is here considered as spondyloarthropathy, the first evidence for a non-tetanuran theropod. The microstructural arrangement of the right tibia of Quilmesaurus shows a marked variation in a portion of the outer cortex, probably due to the presence of the radial fibrolamellar bone tissue. Although similar bone tissue is present in other extinct vertebrates and the cause of its formation is still debated, it could be a response to some kind of pathology. Among non-avian theropods, traumatic injuries are better represented than other maladies (e.g., infection, congenital or metabolic diseases, etc.). These pathologies are recovered mainly among large-sized theropods such as Abelisauridae, Allosauridae, Carcharodontosauridae, and Tyrannosauridae, and distributed principally among axial elements. Statistical tests on the distribution of injuries in these theropod clades show a strong association between taxa-pathologies, body regions-pathologies, and taxa-body regions, suggesting different life styles and behaviours may underlie the frequency of different injuries among theropod taxa.
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  • 文章类型: Journal Article
    新热带飞虱属TrigavaO\'Brien,1999(半翅目,Fulgoromorpha,弓咽科,Nersiini)进行了修订。包括四个物种:T.brachycatha(Melichar,1912)(类型物种,从秘鲁),T.obrieniSong,Malenovskä&Deckert,sp.11月。(来自巴西),T.PeruensisSong,奥布赖恩和巴特利特,sp.11月。(来自秘鲁),和T.recora(梅利查尔,1912年)(来自玻利维亚和秘鲁)。被指定为IgavabrachycathaMelichar的模板,1912年和IgavarecovaMelichar,1912.描述了所有物种,包括男性生殖器的习性照片和详细插图。首次为该属描述了男性和女性生殖器。提供了用于识别Trigava物种的密钥和分布图。
    The Neotropical planthopper genus Trigava O\'Brien, 1999 (Hemiptera, Fulgoromorpha, Dictyopharidae, Nersiini) is revised. Four species are included: T.brachycephala (Melichar, 1912) (the type species, from Peru), T.obrieni Song, Malenovský & Deckert, sp. nov. (from Brazil), T.peruensis Song, O\'Brien & Bartlett, sp. nov. (from Peru), and T.recurva (Melichar, 1912) (from Bolivia and Peru). Lectotypes are designated for Igavabrachycephala Melichar, 1912 and Igavarecurva Melichar, 1912. All species are described, including habitus photographs and detailed illustrations of the male genitalia. Male and female genitalia are described for this genus for the first time. A key for identification of the species of Trigava and a distribution map are provided.
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  • 文章类型: Journal Article
    虽然起源于一种常见的冈瓦南植物,自从非洲大陆从南美分裂以来,非洲和南美的植物区系的多样性和组成已经大相径庭,现在植物物种丰富度更高。然而,植物区系的多样性以及这告诉我们它们的进化仍未被探索。我们证明,对于给定的物种丰富度和考虑陆地表面积,地形,和当今的气候,南美的被子植物系统发育多样性高于非洲。无论是否考虑所有气候匹配区域或仅考虑热带气候的匹配区域,这种关系都成立。相对于非洲和南美西北部的避难所地区的物种丰富度,系统发育多样性很高。曾经是北方移民的门户。虽然物种丰富度受南美大量植物辐射的强烈影响,我们发现历史过程对南美和非洲植物区系发生多样性的普遍影响。
    Although originating from a common Gondwanan flora, the diversity and composition of the floras of Africa and South America have greatly diverged since continental breakup of Africa from South America now having much higher plant species richness. However, the phylogenetic diversity of the floras and what this tells us about their evolution remained unexplored. We show that for a given species richness and considering land surface area, topography, and present-day climate, angiosperm phylogenetic diversity in South America is higher than in Africa. This relationship holds regardless of whether all climatically matched areas or only matched areas in tropical climates are considered. Phylogenetic diversity is high relative to species richness in refugial areas in Africa and in northwestern South America, once the gateway for immigration from the north. While species richness is strongly influenced by massive plant radiations in South America, we detect a pervasive influence of historical processes on the phylogenetic diversity of both the South American and African floras.
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  • 文章类型: Journal Article
    敦促世界各国采取有力措施,促进人类发展,减轻人类活动为追求可持续发展而对地球施加的压力,这项研究涵盖了全球154个国家,以七大区域为重点。利用联合国开发计划署于2020年12月15日提出的行星压力调整人类发展指数(PHDI)作为衡量人类发展水平的指标,本文旨在对1990年至2021年的人类发展数据进行标准化和国际比较。随后,采用泰尔指数,该研究评估了七个地区的全球人类发展状况,以分析PHDI的空间差异。最后,构建了一种综合的广义指数法(GDIM),以准确反映绝对因素和潜在因素,剖析影响全球PHDI的驱动力。该研究探索了在人与自然和谐相处中实现人类高质量发展的关键途径。通过逐步回归验证了GDIM结果的稳健性。研究结果表明,各地区PHDI的发展水平各不相同,随着不同的空间层次结构的发展:欧洲和东欧的人类发展水平更高,北美和南美的有利水平,大洋洲和亚洲的水平相似,以及非洲的显著改善潜力。随着全球化的发展,PHDI的总体差异逐渐减少;然而,区域之间和区域内的差距仍然存在。经济,技术,人均福利效应持续积极推动PHDI。相比之下,环境压力效应,社会效应,人均增加值效应,产出碳强度效应始终发挥着敌对的驱动力。人口规模对PHDI的影响呈现波动趋势。此外,就累积贡献值而言,驱动力的三大贡献者是经济,技术,和人均福利效应。
    To urge nations worldwide to implement robust measures for enhancing human development and mitigating the pressures exerted on the planet by human activities in pursuit of sustainable development, this study encompasses 154 countries globally, using the seven major regions as focal points. Leveraging the Planetary Pressure Adjusted Human Development Index (PHDI) proposed by the United Nations Development Programme on December 15, 2020, as a metric for human development levels, this paper aims to standardize and internationally compare human development data from 1990 to 2021. Subsequently, employing the Theil index, the study assesses the global human development status across the seven regions to analyze spatial disparities in PHDI. Lastly, a comprehensive Generalized Diese Index Method (GDIM) is constructed to accurately reflect absolute and latent factors, dissecting the driving forces impacting global PHDI. The study explores critical pathways for high-quality human development within the harmonious coexistence between humanity and nature. It validates the robustness of GDIM results through a stepwise regression. Research findings indicate varying levels of PHDI development across regions, with a distinct spatial hierarchy evolving: higher human development levels in Europe and Eastern Europe, favorable levels in North and South America, similar levels in Oceania and Asia, and significant improvement potential in Africa. As globalization progresses, overall differences in PHDI gradually decrease; however, disparities persist between and within regions. Economic, technological, and per capita welfare effects consistently positively drive PHDI. In contrast, environmental pressure effects, social effects, per capita value-added effects, and output carbon intensity effects consistently exert hostile driving forces. Population size effects on PHDI show a fluctuating trend. Moreover, in terms of cumulative contribution values, the top three contributors to driving forces are economic, technological, and per capita welfare effects.
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  • 文章类型: Journal Article
    蜜蜂是开花植物中最重要的传粉者。这种伙伴关系开始了CA。1.2亿年前,但是蜜蜂如何以及何时在地球上传播的不确定性极大地掩盖了对这种关键互惠主义的研究。我们使用广泛的新基因组和化石数据对蜜蜂生物地理学进行了新的分析,以证明蜜蜂起源于冈瓦纳西部(非洲和南美)。蜜蜂可能起源于白垩纪早期,在西部冈瓦纳解体前不久,任何主要蜜蜂谱系的早期进化都与南美或非洲土地有关。随后,蜜蜂通过复杂的替代和散布历史在北部大陆定居。大陆地上明显的早期缺席,尤其是在澳大利亚和印度,对于理解当地植物区系的组装和多种授粉方式具有重要意义。蜜蜂如何从假设的南半球起源传播到世界各地,与许多开花植物进化枝的历史相似,为研究被子植物授粉综合征在空间和时间上的演变提供了必要的步骤。
    Bees are the most significant pollinators of flowering plants. This partnership began ca. 120 million years ago, but the uncertainty of how and when bees spread across the planet has greatly obscured investigations of this key mutualism. We present a novel analysis of bee biogeography using extensive new genomic and fossil data to demonstrate that bees originated in Western Gondwana (Africa and South America). Bees likely originated in the Early Cretaceous, shortly before the breakup of Western Gondwana, and the early evolution of any major bee lineage is associated with either the South American or African land masses. Subsequently, bees colonized northern continents via a complex history of vicariance and dispersal. The notable early absences from large landmasses, particularly in Australia and India, have important implications for understanding the assembly of local floras and diverse modes of pollination. How bees spread around the world from their hypothesized Southern Hemisphere origin parallels the histories of numerous flowering plant clades, providing an essential step to studying the evolution of angiosperm pollination syndromes in space and time.
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  • 文章类型: Journal Article
    阿特拉津(ATR)是在亚洲和南美洲广泛使用的除草剂,具有缓慢的自然降解和对人类和动物健康的有害影响。包括海马毒性.然而,对ATR诱导的海马损伤的分子机制知之甚少.筛选差异表达的mRNA和微小RNA(miRNA),潜在的miRNA-mRNA调控网络的构建可以揭示这些机制,因此,我们分析了大鼠海马来源的H19-7细胞响应ATR(500μM)的mRNA和miRNA表达谱,并进行了基因本体论(GO)和京都基因和基因组富集百科全书(KEGG)分析。miRNA测序(miRNA-seq)和mRNA测序(mRNA-seq)的整合结果鉴定出114个差异表达的miRNA(DEMIs,40上调和74下调),和510种差异表达的mRNA(DEM,177个上调和333个下调)由这些DEMIs靶向。前10名枢纽mRNA(Fos,Prkcb,Ncf1,Vcam1,Atf3,Pak3,Pak1,Cacna1s,Junb,和Ccl2)和19个相关的miRNA(rno-miR-194-5p,rno-miR-24-3p,rno-miR-3074,rno-miR-1949,rno-miR-218a-1-3p,rno-miR-1843a-5p,rno-miR-1843b-5p,rno-miR-296-3p,rno-miR-320-3p,rno-miR-219a-1-3p,rno-miR-122-5p,rno-miR-1839-5p,rno-miR-1843a-3p,rno-miR-215,rno-miR-3583-3p,rno-miR-194-3p,rno-miR-128-1-5p,rno-miR-1956-5p,和rno-miR-466b-2-3p)通过定量实时PCR进行验证。GO分析表明,这些DEM富含与突触可塑性和抗氧化能力相关的基因,虽然KEGG分析表明,富集的DEM参与钙信号传导,轴突引导,MAPK信号,和胶质细胞癌变。本文鉴定的miRNA-mRNA调控网络可能为ATR诱导的海马神经毒性的治疗提供潜在的生物标志物和新策略。
    Atrazine (ATR) is a widely applied herbicide in Asia and South America with slow natural degradation and documented deleterious effects on human and animal health, including hippocampal toxicity. However, relatively little is known about the molecular mechanisms responsible for ATR-induced hippocampal damage. Screening for differentially expressed mRNAs and microRNAs (miRNAs), and construction of potential miRNA-mRNA regulatory networks can reveal such mechanisms, so we analyzed the mRNA and miRNA expression profiles of rat hippocampus-derived H19-7 cells in response to ATR (500 μM) and conducted Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes enrichment (KEGG) analyses. Integration of miRNA sequencing (miRNA-seq) and mRNA sequencing (mRNA-seq) results identified 114 differentially expressed miRNAs (DEMIs, 40 upregulated and 74 downregulated), and 510 differentially expressed mRNAs (DEMs, 177 upregulated and 333 downregulated) targeted by these DEMIs. The top 10 hub mRNAs (Fos, Prkcb, Ncf1, Vcam1, Atf3, Pak3, Pak1, Cacna1s, Junb, and Ccl2) and 19 related miRNAs (rno-miR-194-5p, rno-miR-24-3p, rno-miR-3074, rno-miR-1949, rno-miR-218a-1-3p, rno-miR-1843a-5p, rno-miR-1843b-5p, rno-miR-296-3p, rno-miR-320-3p, rno-miR-219a-1-3p, rno-miR-122-5p, rno-miR-1839-5p, rno-miR-1843a-3p, rno-miR-215, rno-miR-3583-3p, rno-miR-194-3p, rno-miR-128-1-5p, rno-miR-1956-5p, and rno-miR-466b-2-3p) were validated by quantitative real-time PCR. GO analysis indicated that these DEMs were enriched in genes associated with synaptic plasticity and antioxidant capacity, while KEGG analysis suggested that enriched DEMs were involved in calcium signaling, axon guidance, MAPK signaling, and glial carcinogenesis. The miRNA-mRNA regulatory network identified here may provide potential biomarkers and novel strategies for the treatment of hippocampal neurotoxicity induced by ATR.
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  • 文章类型: Journal Article
    背景:栽培花生(花生),杜兰A.duranensis和ipaensis杂交的后代,是南美重要的石油和蛋白质作物。迄今为止,至少有六个Arachis基因组被测序。WRKY转录因子(TFs)在植物生长中起着至关重要的作用,发展,以及对非生物和生物胁迫的反应。WRKYTFs已在杜兰酵母中鉴定出,A.ipaensis,和A.hypogaeacv。Tifrunner;然而,它们在各种Arachisspp中的数量和进化模式的变化。仍然不清楚。
    结果:WRKYTFs在不同的花生物种中进行了鉴定和比较,包括杜兰奈斯,A.ipaensis,A.Monticola,A.hypogaea品种(简历。)福华生,A.hypogaeacv。石头旗,和A.hypogaeacv。Tifrunner.结果表明,WRKYTFs在二倍体和四倍体花生物种之间处于动态平衡状态,其特点是失去旧的WRKYTFs和保留新的TFs。值得注意的是,栽培花生比野生二倍体供体从野生四倍体花生中继承了更多保守的WRKY直系同源物。对W盒元素和蛋白质-蛋白质相互作用的分析表明,不同的驯化过程会影响栽培花生品种的WRKY进化。A.hypogaeacv的WRKYTFs。福华生和石头旗表现出相似的驯化过程,而那些cv。根据蛋白质-蛋白质相互作用分析,同一物种的Tifrunner经历了不同的驯化过程。
    结论:这项研究为Arachisspp中WRKYTFs的进化提供了新的见解。
    BACKGROUND: Cultivated peanut (Arachis hypogaea), a progeny of the cross between A. duranensis and A. ipaensis, is an important oil and protein crop from South America. To date, at least six Arachis genomes have been sequenced. WRKY transcription factors (TFs) play crucial roles in plant growth, development, and response to abiotic and biotic stresses. WRKY TFs have been identified in A. duranensis, A. ipaensis, and A. hypogaea cv. Tifrunner; however, variations in their number and evolutionary patterns across various Arachis spp. remain unclear.
    RESULTS: WRKY TFs were identified and compared across different Arachis species, including A. duranensis, A. ipaensis, A. monticola, A. hypogaea cultivars (cv.) Fuhuasheng, A. hypogaea cv. Shitouqi, and A. hypogaea cv. Tifrunner. The results showed that the WRKY TFs underwent dynamic equilibrium between diploid and tetraploid peanut species, characterized by the loss of old WRKY TFs and retention of the new ones. Notably, cultivated peanuts inherited more conserved WRKY orthologs from wild tetraploid peanuts than their wild diploid donors. Analysis of the W-box elements and protein-protein interactions revealed that different domestication processes affected WRKY evolution across cultivated peanut varieties. WRKY TFs of A. hypogaea cv. Fuhuasheng and Shitouqi exhibited a similar domestication process, while those of cv. Tifrunner of the same species underwent a different domestication process based on protein-protein interaction analysis.
    CONCLUSIONS: This study provides new insights into the evolution of WRKY TFs in Arachis spp.
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