Binding protein

  • 文章类型: Journal Article
    叶绿素是植物光合作用最重要的载体,因此对植物的生长和发育至关重要。5-氨基乙酰丙酸(ALA)的合成由谷氨酰-tRNA还原酶(GluTR)引发和催化,是叶绿素生物合成中的限速步骤。GluTR受多种调节因素控制。尽管许多研究已经研究了GluTR在植物中的结构和功能,玉米(ZeamaysL.)GluTR尚未报道。这里,我们从玉米诱变群体中分离并鉴定了植物中GluTR的第一个功能丧失突变体。ZmGluTR1中的停止增益突变导致整个生长季节的叶片黄化。在突变体中,叶绿素生物合成和光合色素的中间体水平显着降低,并且还观察到异常的叶绿体结构。进一步的分析表明,羧基末端(C-末端)的缺失导致过早的转录终止,这阻碍了与荧光(FLU)的相互作用,从而影响突变的ZmGluTR1的稳定性并导致消除与GluTR结合蛋白(GluBP)的相互作用。此外,在正常生长条件下,催化结构域或烟酰胺腺嘌呤二核苷酸磷酸(NADPH)结合结构域的突变是致死的.这些结果表明ZmGluTR1在叶绿素生物合成和玉米发育中起着重要作用。
    Chlorophyll is the most important carrier of photosynthesis in plants and is therefore vital for plant growth and development. Synthesis of 5-aminolevulinic acid (ALA) is initiated and catalyzed by glutamyl-tRNA reductase (GluTR) and is the rate-limiting step in chlorophyll biosynthesis. GluTR is controlled by several regulating factors. Although many studies have investigated the structure and function of GluTR in plants, the maize (Zea mays L.) GluTR has not yet been reported. Here, we isolated and identified the first loss-of-function mutant of GluTR in plants from a maize mutagenic population. The stop-gain mutation in ZmGluTR1 resulted in leaf etiolation throughout the growing season. The level of intermediates of chlorophyll biosynthesis and photosynthetic pigments decreased markedly and abnormal chloroplast structure was also observed in the mutants. Further analysis revealed that the deletion of carboxyl terminal (C-terminal) led to premature transcription termination and this hindered the interaction with FLUORESCENT (FLU), thereby influencing the stability of mutated ZmGluTR1 and leading to abolish interaction with GluTR-binding protein (GluBP). Moreover, mutations in the catalytic domain or nicotinamide adenine dinucleotide phosphate (NADPH) binding domain were lethal under normal growth conditions. These results indicate that ZmGluTR1 plays a fundamental role in chlorophyll biosynthesis and maize development.
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  • 文章类型: Journal Article
    本研究调查了断奶过程中三种猪品种的胰岛素样生长因子(IGFs)及其受体和结合蛋白。60杜洛克(DR),桃园黑(TYB),和香村黑(XCB)仔猪(每个品种20只仔猪)在21和24(断奶后3天)日龄进行器官指数分析,使用ELISA试剂盒,IGF和IGF结合蛋白(IGFBPs)的血浆浓度,以及IGF系统相关成分在不同组织中的基因表达。21日龄时TYB仔猪血浆IGFBP-3浓度高于XCB和DR仔猪(p>0.05)。在21天大的时候,与DR仔猪相比,IGF-1在肾脏中的表达较低(p<0.05),但在XCB和TYB仔猪的脾脏中含量较高(p<0.05)。在24天大的时候,TYB仔猪肾脏中IGF-1的表达高于XCB和DR仔猪(p<0.05),而XCB和TYB仔猪的胃中IGFBP-3和肝脏中IGFBP-4均低于DR仔猪(p<0.05)。断奶下调(p<0.05)空肠IGF-1表达,脾,脾和仔猪的肝脏,而它上调(p<0.05)胃中IGFBP-3的表达,肝脏中的IGFBP-4,回肠中的IGFBP-5,DR仔猪空肠中的IGFBP-6。Spearman相关分析显示,血浆IGFBP-2和IGFBP-5浓度与仔猪器官指数呈负相关(p<0.05)。总的来说,三个猪种之间的IGF系统成分存在显着差异。IGF系统成分在断奶过程中发生了改变,这可能与断奶应激降低仔猪生长有关。
    The present study investigated the insulin-like growth factors (IGFs) and their receptors and binding proteins among three pig breeds during weaning. Sixty Duroc (DR), Taoyuan black (TYB), and Xiangcun black (XCB) piglets (20 piglets per breed) were selected at 21 and 24 (3 days of post-weaning) days of age to analyze organ indices, plasma concentrations of IGF and IGF-binding proteins (IGFBPs) using ELISA kits, and gene expression of IGF-system-related components in different tissues. The plasma IGFBP-3 concentration in TYB piglets was higher (p > 0.05) than in the XCB and DR piglets at 21 days of age. At 21 days of age, compared with the DR piglets, the IGF-1 expression was lower (p < 0.05) in the kidney, but it was higher (p < 0.05) in the spleen of XCB and TYB piglets. At 24 days of age, the IGF-1 expression was higher (p < 0.05) in the kidney of TYB piglets than in the XCB and DR piglets, while IGFBP-3 in the stomach and IGFBP-4 in the liver of XCB and TYB piglets were lower (p < 0.05) compared with the DR piglets. Weaning down-regulated (p < 0.05) IGF-1 expression in the jejunum, spleen, and liver of piglets, while it up-regulated (p < 0.05) IGFBP-3 expression in the stomach, IGFBP-4 in the liver, IGFBP-5 in the ileum, and IGFBP-6 in the jejunum of DR piglets. Spearman\'s correlation analysis showed a negative correlation (p < 0.05) between plasma IGFBP-2 and IGFBP-5 concentration and the organ indices of piglets. Collectively, there were significant differences in the IGF system components among the three pig breeds. The IGF system components were altered during weaning, which might be involved in weaning stress to decrease the growth of piglets.
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  • 文章类型: Journal Article
    长链非编码RNA(lncRNAs)参与生物和非生物胁迫下的植物生物过程。然而,在分子水平上对与病原体相关的lncRNAs的功能和调节机制知之甚少。香蕉lncRNA,Malnc2310是尖孢镰刀菌f.sp.根中的立方诱导lncRNA。在这项研究中,我们通过荧光原位杂交证明了Malnc2310的核定位,它可以与与类黄酮途径相关的几种蛋白质结合,病原体反应和程序性细胞死亡。过表达Malnc2310增加对镰刀菌粗提物(Fu)的敏感性,盐度,和冷在转基因拟南芥。此外,Malnc2310转基因拟南芥在镰刀菌粗提取物和冷处理下积累了更多的花色苷,这与花色苷生物合成中这些基因的上调有关。根据我们的发现,我们认为Malnc2310可能参与植物在胁迫下的类黄酮代谢。此外,在Malnc2310过表达的转基因拟南芥中,苯丙氨酸解氨酶(PAL)蛋白表达增强,和Malnc2310可以通过约束来参与PAL的监管。这项研究为Malnc2310在介导植物逆境适应中的作用提供了新的见解。
    Long noncoding RNAs (lncRNAs) participate in plant biological processes under biotic and abiotic stresses. However, little is known about the function and regulation mechanism of lncRNAs related to the pathogen at a molecular level. A banana lncRNA, Malnc2310, is a Fusarium oxysporum f. sp. cubense inducible lncRNA in roots. In this study, we demonstrate the nuclear localization of Malnc2310 by fluorescence in situ hybridization and it can bind to several proteins that are related to flavonoid pathway, pathogen response and programmed cell death. Overexpression of Malnc2310 increases susceptibility to Fusarium crude extract (Fu), salinity, and cold in transgenic Arabidopsis. In addition, Malnc2310 transgenic Arabidopsis accumulated more anthocyanins under Fusarium crude extract and cold treatments that are related to upregulation of these genes involved in anthocyanin biosynthesis. Based on our findings, we propose that Malnc2310 may participate in flavonoid metabolism in plants under stress. Furthermore, phenylalanine ammonia lyase (PAL) protein expression was enhanced in Malnc2310 overexpressed transgenic Arabidopsis, and Malnc2310 may participate in PAL regulation by binding to it. This study provides new insights into the role of Malnc2310 in mediating plant stress adaptation.
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  • 文章类型: Journal Article
    中肠受体在Cry毒素对单个昆虫物种的特异性中起关键作用。钙黏着蛋白是鳞翅目幼虫中Cry1A毒素的重要推定受体。Cry2A家族成员在棉铃虫中共享共同的结合位点,其中一个,Cry2Aa,已被广泛报道与中肠钙黏着蛋白相互作用。这里,我们研究了棉铃虫钙粘蛋白在Cry2Ab毒性机制中的结合相互作用和功能作用。从钙黏着蛋白重复6(CR6)到钙黏着蛋白的膜近端区(MPR)的区域作为六个重叠肽产生,以鉴定Cry2Ab的特异性结合区。结合测定显示Cry2Ab在变性状态下非特异性结合含有CR7和CR11区域的肽,但在天然状态下仅特异性结合含有CR7的肽。肽CR6-11和CR6-8在Sf9细胞中瞬时表达以评估钙粘蛋白的功能作用。细胞毒性试验表明,Cry2Ab对表达任何钙粘蛋白肽的细胞没有毒性。然而,ABCA2表达细胞显示出对Cry2Ab毒素的高度敏感性。当肽CR6-11与ABCA2基因在Sf9细胞中共表达时,观察到对Cry2Ab的敏感性既不增加也不降低。相反,与用单独的Cry2Ab处理相比,用Cry2Ab和CR6-8肽的混合物处理表达ABCA2的细胞导致显著减少的细胞死亡。此外,在棉铃虫幼虫中沉默cadherin基因对Cry2Ab毒性没有显着影响,与ABCA2沉默幼虫死亡率降低相反。重要性为了提高作物中单一毒素的生产效率,并延迟昆虫对毒素的抗性进化,第二代Bt棉,表达Cry1Ac和Cry2Ab,被介绍了。了解昆虫中肠中Cry蛋白的模式作用以及昆虫用来克服这些毒素的机制在制定对策中起着至关重要的作用。已经对Cry1A毒素的受体进行了广泛的研究,但是关于Cry2Ab的研究相对较少。通过显示cadherin蛋白与Cry2Ab的非功能性结合,我们进一步加深了对Cry2Ab受体的了解。
    Midgut receptors play a critical role in the specificity of Cry toxins for individual insect species. Cadherin proteins are essential putative receptors of Cry1A toxins in lepidopteran larvae. Cry2A family members share common binding sites in Helicoverpa armigera, and one of them, Cry2Aa, has been widely reported to interact with midgut cadherin. Here, we studied the binding interaction and functional role of H. armigera cadherin in the mechanism of Cry2Ab toxicity. A region spanning from cadherin repeat 6 (CR6) to the membrane-proximal region (MPR) of cadherin protein was produced as six overlapping peptides to identify the specific binding regions of Cry2Ab. Binding assays showed that Cry2Ab binds nonspecifically to peptides containing CR7 and CR11 regions in a denatured state but binds specifically only to CR7-containing peptides in the native state. The peptides CR6-11 and CR6-8 were transiently expressed in Sf9 cells to assess the functional role of cadherin. Cytotoxicity assays showed that Cry2Ab is not toxic to the cells expressing any of the cadherin peptides. However, ABCA2-expressing cells showed high sensitivity to Cry2Ab toxin. Neither increased nor decreased sensitivity to Cry2Ab was observed when the peptide CR6-11 was coexpressed with the ABCA2 gene in Sf9 cells. Instead, treating ABCA2-expressing cells with a mixture of Cry2Ab and CR6-8 peptides resulted in significantly reduced cell death compared with treatment with Cry2Ab alone. Moreover, silencing of the cadherin gene in H. armigera larvae showed no significant effect on Cry2Ab toxicity, in contrast to the reduced mortality in ABCA2-silenced larvae. IMPORTANCE To improve the efficiency of production of a single toxin in crops and to delay the evolution of insect resistance to the toxin, the second generation of Bt cotton, expressing Cry1Ac and Cry2Ab, was introduced. Understanding the mode action of the Cry proteins in the insect midgut and the mechanisms insects use to overcome these toxins plays a crucial role in developing measures to counter them. Extensive studies have been conducted on the receptors of Cry1A toxins, but relatively little has been done about those of Cry2Ab. By showing the nonfunctional binding of cadherin protein with Cry2Ab, we have furthered the understanding of Cry2Ab receptors.
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  • 文章类型: Journal Article
    DestruxinA(DA)是从昆虫病原真菌中分离出的环六缩肽杀虫真菌毒素,绿僵菌属。然而,它的作用方式是未知的。在这项研究中,我们通过药物亲和反应靶标稳定性分离了149个候选DA结合蛋白,并通过表面等离子体共振测定了80种直烷酸与DA的体外相互作用。亲和力系数(KD)为24至469μM。结合蛋白功能多样,包括细胞骨架成分和细胞运动,蛋白质转录和翻译途径,泛素依赖性蛋白质代谢过程,核孔进出,内质网囊泡转运等。电镜显示DA损伤细胞骨架和多个细胞器,破坏细胞粘附和运动,导致细胞死亡.DA似乎对细胞结构和多个生命过程有多目标的方法,导致细胞死亡。本研究结果可为DA的杀虫毒理学分析提供分子依据,进一步完善对绿僵菌致病昆虫机理的研究。
    Destruxin A (DA) is a cyclo-hexadepsipeptidic insecticidal mycotoxin isolated from the entomopathogenic fungi, Metarhizium spp. However, its mode of action is unknown. In this study, we isolated 149 candidate DA-binding proteins by drug affinity response target stability, and determined the interactions of 80 canditates with DA in vitro by surface plasmon resonance. The affinity coefficients (KD) ranged from 24 to 469 μM. Binding proteins were functionally diverse and included cytoskeletal components and cell motility, protein transcription and translation pathways, ubiquitin dependent protein metabolic processes, nucleus pore entry and exit, and endoplasmic reticulum vesicle transport and etc. Electron microscopy revealed that DA damaged the cytoskeleton and multiple organelles, disrupted cell adhesion and motility, and led to cell death. DA appeared to have a multi-targeted approach to cellular structures and multiple life processes, leading to cell death. The results of this study could provide molecular evidence for the analysis of the insecticidal toxicology of DA and further improve the study of the pathogenic insect mechanism of Metarhizium.
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  • 文章类型: Journal Article
    DestruxinA(DA),昆虫病原真菌金叶绿霉菌产生的六环缩肽霉菌毒素,具有杀虫活性,但其分子作用机制尚不清楚。三种具有修饰相关功能的蛋白质,钙网蛋白(BmCRT),二肽基肽酶Ⅲ(BmDPP3),和蛋白质二硫键异构酶A5(BmPDIA5),在本研究中选择验证与DA的相互作用。通过表面等离子体共振(SPR)和体外生物层干涉法(BLI)测量相互作用的动力学数据。DA与BmCRT的KD值,BmDPP3和BmPDIA5的范围为10-4至10-5mol/L,这表明这三种蛋白质都与DA有相当强的相互作用。然后,在SF-9细胞的昆虫双杂交试验中,发现DA以剂量依赖的方式影响三种蛋白质与其伴侣的相互作用。此外,酶活性的ELISA检测结果表明,DA能抑制BmDPP3的活性,但对BmPDIA5无明显影响。此外,DA诱导BmDPP3的上调和BmCRT的下调。结果证明,BmCRT,BmDPP3和BmPDIA5都是DA的结合蛋白。本研究可能为阐明DA的分子机制提供新的见解。
    Destruxin A (DA), a hexa-cyclodepsipeptidic mycotoxin produced by the entomopathogenic fungus Metarhizium anisopliae, has insecticidal activity, but its molecular mechanism of action is still not clear. Three proteins with modification-related functions, calreticulin (BmCRT), dipeptidyl peptidase Ⅲ (BmDPP3), and protein disulfide isomerase A5 (BmPDIA5), were selected to verify the interactions with DA in this study. The kinetic data of the interactions were measured by surface plasmon resonance (SPR) and bio-layer interferometry (BLI) in vitro. The KD values of DA with BmCRT, BmDPP3, and BmPDIA5 ranged from 10-4 to 10-5 mol/L, which suggested that the three proteins all had fairly strong interactions with DA. Then, it was found that DA in a dose-dependent manner affected the interactions of the three proteins with their partners in insect two-hybrid tests in SF-9 cells. Furthermore, the results of enzyme activities by ELISA indicated that DA could inhibit the activity of BmDPP3 but had no significant effect on BmPDIA5. In addition, DA induced the upregulation of BmDPP3 and the downregulation of BmCRT. The results prove that BmCRT, BmDPP3, and BmPDIA5 are all binding proteins of DA. This study might provide new insights to elucidate the molecular mechanism of DA.
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  • 文章类型: Journal Article
    类胡萝卜素在生物体中起重要作用。然而,动物不能自己合成类胡萝卜素,他们必须从饮食中吸收和积累类胡萝卜素,其中涉及一些关键基因。在目前的研究中,一种名为StAR-like-3的基因在高贵的扇贝Chlamysnobilis中表征,用类胡萝卜素含量较高的金扇贝和类胡萝卜素含量较低的棕色扇贝通过免疫组织化学鉴定其功能,类胡萝卜素结合测定和RNAi。结果表明,StAR-like-3编码481个氨基酸的54.7kDa跨膜蛋白(命名为StAR3),其中包含一个MENTAL域和一个START(类固醇性急性调节蛋白相关脂质转移)域,金扇贝在血细胞和肠道中的表达水平明显高于棕色扇贝。随后,在金扇贝的肠上皮细胞中检测到StAR3蛋白,重组StAR3能与G蛋白和抗体结合形成黄色复合物,这表明它是一种类胡萝卜素结合蛋白,参与类胡萝卜素在黄金扇贝中的积累。此外,当StAR-like-3的表达被抑制时,金扇贝中血淋巴的总类胡萝卜素含量显着降低,这表明该基因在类胡萝卜素的转运中起着重要作用。结论,本结果表明,StAR样3是扇贝中类胡萝卜素积累的关键基因。
    Carotenoids play important roles in living organisms. However, animals cannot synthesize carotenoids by themselves, and they must absorb and accumulate carotenoids from their diets in which some key genes are involved. In present study, a gene named StAR-like-3 was characterized in the noble scallop Chlamys nobilis, and its function was identified using golden scallops with higher carotenoids content and brown scallops with less carotenoids content by immunohistochemistry, carotenoid binding assay and RNAi. Results showed that the StAR-like-3 encodes a 54.7 kDa transmembrane protein (named as StAR3) of 481 amino acids containing a MENTAL domain and a START (Steroidogenic acute regulatory protein-related lipid transfer) domain, and its expression level in hemocytes and intestine of golden scallops were significantly higher than those of brown ones. Subsequently, the StAR3 protein was detected in the intestinal epithelial cells of golden scallops, and recombinant StAR3 could bind lutein conjugated to protein G and antibody to form a yellow complex, suggesting it is a carotenoid binding protein involving in carotenoids accumulation in golden scallops. Furthermore, total carotenoids content of hemolymph in golden scallops was significantly decreased when the expression of StAR-like-3 suppressed, suggesting this gene plays an important role in transport of carotenoids. Conclusion, the present results indicated that the StAR-like-3 is a key gene responsible for the carotenoids accumulation in the scallop.
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  • 文章类型: Journal Article
    真核信使mRNA含有许多RNA甲基化学修饰,其中N6-甲基腺苷(m6A)起着非常重要的作用。RNA甲基化的修饰过程是一个动态可逆的调控过程,主要由\"Writer\"m6A甲基转移酶催化,被“橡皮擦”M6A去甲基酶移除,并被m6A结合蛋白识别,因此,连接m6A修饰与其他mRNA途径。在生命周期的各个阶段,m6A修饰在调节mRNA剪接中起着极其重要的作用,processing,翻译,以及退化,并且与两性的配子发生和生育能力有关。正常的配子发生是生育能力的基本保证。不孕导致创伤,影响家庭和谐,严重影响生活质量。我们综述了RNAm6A甲基化修饰在不孕症中的作用和机制,并为不孕症的治疗提供一个潜在的靶点。可用于药物开发。
    Eukaryotic messenger mRNAs contain many RNA methyl chemical modifications, in which N6-methyladenosine (m6A) plays a very important role. The modification process of RNA methylation is a dynamic reversible regulatory process that is mainly catalyzed by \"Writer\" m6A methyltransferase, removed by \"Eraser\" m6A demethylase, and recognized by the m6A binding protein, thereby, linking m6A modification with other mRNA pathways. At various stages of the life cycle, m6A modification plays an extremely important role in regulating mRNA splicing, processing, translation, as well as degradation, and is associated with gametogenesis and fertility for both sexes. Normal gametogenesis is a basic guarantee of fertility. Infertility leads to trauma, affects harmony in the family and seriously affects the quality of life. We review the roles and mechanisms of RNA m6A methylation modification in infertility and provide a potential target for infertility treatment, which can be used for drug development.
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  • 文章类型: Journal Article
    Destruxin A (DA), a hexa-cyclodepsipeptidic mycotoxin produced by the entomopathogenic fungus Metarhizium anisopliae, exhibits insecticidal activities in a wide range of pests and is known as an innate immunity inhibitor. However, its mechanism of action requires further investigation. In this research, the interactions of DA with the six aminoacyl tRNA synthetases (ARSs) of Bombyx mori, BmAlaRS, BmCysRS, BmMetRS, BmValRS, BmIleRS, and BmGluProRS, were analyzed. The six ARSs were expressed and purified. The BLI (biolayer interferometry) results indicated that DA binds these ARSs with the affinity indices (KD) of 10-4 to 10-5 M. The molecular docking suggested a similar interaction mode of DA with ARSs, whereby DA settled into a pocket through hydrogen bonds with Asn, Arg, His, Lys, and Tyr of ARSs. Furthermore, DA treatments decreased the contents of soluble protein and free amino acids in Bm12 cells, which suggested that DA impedes protein synthesis. Lastly, the ARSs in Bm12 cells were all downregulated by DA stress. This study sheds light on exploring and answering the molecular target of DA against target insects.
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  • 文章类型: Journal Article
    FilaminA(FLNa)是一种肌动蛋白结合蛋白,参与细胞骨架的形成,在细胞骨架中锚定多种蛋白质,调节细胞粘附和迁移。它参与信号转导,细胞增殖和分化,伪足形成,囊泡运输,与相互作用蛋白结合的肿瘤抗性和遗传疾病。为了充分阐明结构,FLNa的功能和发病机制,我们总结了迄今为止所有直接或间接作用于FLNa的物质,对其有影响的上游和下游目标,信号通路及其功能。同时记录了FLNa在不同疾病中的表达和作用,包括遗传性疾病和肿瘤.
    Filamin A(FLNa) is an actin-binding protein, which participates in the formation of the cytoskeleton, anchors a variety of proteins in the cytoskeleton and regulates cell adhesion and migration. It is involved in signal transduction, cell proliferation and differentiation, pseudopodia formation, vesicle transport, tumor resistance and genetic diseases by binding with interacting proteins. In order to fully elucidate the structure, function and pathogenesis of FLNa, we summarized all substances which directly or indirectly act on FLNa so far, upstream and downstream targets which having effect on it, signaling pathways and their functions. It also recorded the expression and effect of FLNa in different diseases, including hereditary disease and tumors.
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