Ants

蚂蚁
  • 文章类型: Journal Article
    植物细胞壁富含具有高度异质性的多糖。研究细胞壁多糖的组成和结构对于理解植物细胞壁的功能至关重要。糖电泳是一种灵敏、快速、定性、定量分析多糖的方法。该过程包括用适当的裂解酶消化多糖,用高度带电的荧光团标记释放的寡糖的还原末端,通过高压电泳分离聚丙烯酰胺凝胶中标记的寡糖。所产生的荧光可以与寡糖标准品的荧光进行比较来计算。因此,这是一种方便的多糖表征方法,可以在大多数实验室进行。这里,我们介绍了详细的操作步骤和注意事项,有助于研究者快速获得多糖的结构信息。
    The plant cell wall is rich in polysaccharides with high heterogeneity. Investigating the composition and structure of cell wall polysaccharides is crucial for understanding the functionalities of plant cell walls. Carbohydrate electrophoresis is a sensitive and rapid method to analyze polysaccharides qualitatively and quantitatively. The process includes digesting the polysaccharides with appropriate cleavage enzymes, labeling the reducing ends of the released oligosaccharides with a highly charged fluorophore, and separating the labeled oligosaccharides in a polyacrylamide gel via high-voltage electrophoresis. The generated fluorescence can be calculated as compared to that of oligosaccharide standards. Therefore, this is a convenient method for polysaccharide characterization that can be performed in most laboratories. Here, we introduce the detailed operational steps and precautions, which are helpful for researchers to quickly obtain the structural information of polysaccharides.
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  • 文章类型: Journal Article
    金属污染物会对蚂蚁的形态和生理产生有害影响。我们研究了两个污染区(交通污染和工业污染)和一个非污染区的阳刚玉唇腺疾病的发生。我们进一步分析了金属水平(Al,As,Cd,Co,Cr,Cu,Fe,Hg,Mn,Ni,Pb和Zn)和形态特征(头部宽度,体重,和其他形态特征)的患病和健康工人。我们的结果表明,唇腺疾病只存在于污染地区,这表明污染压力使蚂蚁更容易受到感染。我们的研究表明,与未污染环境中的健康蚂蚁相比,受污染地区的患病蚂蚁体内积累了较高的金属含量,并且干重和残余体重较低,对他们的发展产生负面影响。我们评估了这些元素的重要性,发现Cu对刺槐的健康风险影响最大。我们的研究强调了环境污染对蚂蚁形态和生理的重大影响,并引起了人们对更广泛的生态影响的关注。
    Metallic pollutants can have harmful impacts on ant morphology and physiology. We studied the occurrence of labial gland disease in Camponotus japonicus from two polluted areas (traffic pollution and industrial pollution) and one non-polluted area. We further analyzed the metal levels (Al, As, Cd, Co, Cr, Cu, Fe, Hg, Mn, Ni, Pb and Zn) and morphological characteristics (head width, body mass, and other morphological traits) of both diseased and healthy workers. Our results showed that labial gland disease was only present in polluted areas, indicating that pollution stress makes ants more vulnerable to infections. Our research revealed that diseased ants in polluted areas accumulate higher levels of metals in their bodies and have lower dry weight and residual body mass compared to healthy ants in non-polluted environments, negatively impacting their development. We evaluated the importance of these elements and found that Cu has the greatest impact on the health risk of C. japonicus. Our study underscores the significant impact of environmental pollution on ant morphology and physiology and raises concerns about the broader ecological implications.
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  • 文章类型: Journal Article
    Most described Mesozoic ants belong to stem groups that existed only during the Cretaceous period. Previously, the earliest known crown ants were dated to the Turonian (Late Cretaceous, ca. 94-90 million years ago (Ma)) deposits found in the USA, Kazakhstan, and Botswana. However, the recent discovery of an alate male ant in Kachin amber from the earliest Cenomanian (ca. 99 Ma), representing a new genus and species, Antiquiformica alata, revises the narrative on ant diversification. Antiquiformica can be distinctly differentiated from all known male stem ants by its geniculate antennae with elongated scape, extending far beyond the occipital margin of the head and half the length of the funiculus, as well as its partly reduced forewing venation. Furthermore, the combination of a one-segmented waist with a well-developed node, elongated scape extending beyond the occipital margin, and reduced forewing venation, particularly the completely reduced m-cu and rs-m crossveins and absence of rm and mcu closed cells, firmly places the fossil within the extant subfamily Formicinae. Fourier transform infrared spectroscopy (FTIR) confirmed that the amber containing Antiquiformica alata originated from the Kachin mines in Myanmar. This discovery significantly revises our understanding of the early evolution of Formicinae. The presence of Antiquiformica in Cenomanian amber indicates that the subfamily Formicinae emerged at least by the start of the Late Cretaceous, with crown ants likely originating earlier during the earliest Cretaceous or possibly the Late Jurassic, although paleontological evidence is lacking to support the latter hypothesis.
    大多数被描述的中生代蚂蚁属于仅生存在白垩纪的基干类群。目前已知最古老的冠群蚂蚁发现于美国、哈萨克斯坦和博茨瓦纳的土仑阶沉积中(晚白垩纪,约94–90 Ma)。然而,在克钦琥珀中发现的一个森诺曼阶早期的有翅雄蚁新种(约99 Ma)——翼古老蚁( Antiquiformica alata)改变了对蚂蚁类群分化的认识。古老蚁属( Antiquiformica)与所有已知的雄性蚂蚁明显不同:触角呈膝状;柄节较长,延伸远超过后头边缘,长度约为鞭小节的一半;前翅翅脉部分减少。此外,古老蚁属( Antiquiformica)具有一个发育良好的腹结节、延伸超过后头边缘的细长柄节、简化的前翅翅脉,尤其是前翅横脉m-cu和rs-m完全消失、翅室rm和mcu不闭合,这些特征都表明翼古老蚁属于现存的蚁亚科。傅里叶红外光谱(FTIR)结果表明这件琥珀来自缅甸克钦矿区。新化石的发现极大地改变了我们对蚁亚科早期演化的认识。在克钦琥珀(森诺曼阶)中发现的古老蚁属( Antiquiformica)证实蚁亚科至少在晚白垩的早期就已经出现,而冠群蚂蚁出现时间肯定更早。冠群蚂蚁可能起源于白垩纪早期甚至侏罗纪晚期,尽管这一假设还未得到古生物学证据的支持。.
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  • 文章类型: Journal Article
    游戏干预因其有趣的功能和“无痛”促进简单的游戏目标亲环境行为(GPEB)而引起了很多关注,这可能会蔓延到更“昂贵”的亲环境行为(PSBP)。文献非常重视以游戏为目标的机制(例如,享受和竞争)来解释游戏干预的影响,但很少关注非博弈机制来探索其溢出效应。使用来自1246名中国居民的在线调查数据,本文首先比较了玩家和非玩家对GPEB和两个常见PSBP的参与水平,发现从游戏针对性的简单行为到更多样化的PSBP的正溢出效应。基于目标理论,自我感知理论,和学习理论,然后,本文分别研究了参与者和非参与者子样本的GPEB和PSBP之间正相关的潜在中介机制。结果表明,个人对问题和自我效能感的认识可以通过参与简单的GPEB来增强,这可能会蔓延到更具挑战性和“昂贵”的PSBP,包括慈善捐赠和志愿服务于环保事业。该研究提供了重要的见解,有助于鼓励特定类型的更具挑战性的PSBP,而不是游戏直接针对。
    Game interventions have drawn much attention for their playful features and \"painless\" promotion of simple game-targeted pro-environmental behaviors (GPEBs), which could spill over to more \"costly\" prosocial behaviors for pro-environmental causes (PSBPs). The literature places much emphasis on game-targeted mechanisms (e.g., enjoyment and competition) to explain the impacts of game interventions, but pays little attention to non-game-targeted mechanisms to explore their spillover effect. Using online survey data from 1246 Chinese residents, this paper first compares players\' and nonplayers\' levels of engagement with GPEBs and with two common PSBPs, finding a positive spillover effect from game-targeted simple behaviors to more diverse PSBPs. Based upon goal theory, self-perception theory, and learning theory, the paper then examines the underlying mediating mechanisms of the positive relationship between GPEBs and PSBPs for subsamples of players and nonplayers respectively. The results demonstrate that individual awareness of problem and self-efficacy could be enhanced through engaging in simple GPEBs, which could spill over to more challenging and \"costly\" PSBPs, including charitable giving and volunteering for pro-environmental causes. The study provides important insights on helping to encourage specific types of more challenging PSBPs not directly targeted by the game.
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  • 文章类型: Journal Article
    目的:在大多数陆地生态系统中,蚂蚁是生态优势昆虫,迄今为止,已有约340属的14,000多个现存物种。然而,对于大多数物种来说,基因组资源仍然稀缺,尤其是东亚或东南亚特有的物种,限制了系统发育的研究,这种进化上成功的动物谱系的物种形成和适应。这里,我们组装并注释了Odontoponeratransversa和Camponotusfriedae的基因组,两种在中国自然分布的蚂蚁,以促进未来对蚂蚁进化的研究。
    方法:我们获得了O.transversa和C.friedae的16Gb和51GbPacBioHiFi数据,分别,将其组装到O.transversa的339Mb和C.friedae的233Mb的草案基因组中。通过多个度量进行的基因组评估显示了两个组装的良好完整性和高精度。RNA-seq数据辅助的基因注释在两个基因组中产生了相当数量的蛋白质编码基因(O.transversa为10,892,C.friedae为11,296),而重复注释显示,这两种蚂蚁之间的重复含量存在显着差异(O.transversa为149.4Mb,而Friedae为49.7Mb)。此外,组装并注释了这两个物种的完整线粒体基因组。
    OBJECTIVE: Ants are ecologically dominant insects in most terrestrial ecosystems, with more than 14,000 extant species in about 340 genera recorded to date. However, genomic resources are still scarce for most species, especially for species endemic in East or Southeast Asia, limiting the study of phylogeny, speciation and adaptation of this evolutionarily successful animal lineage. Here, we assemble and annotate the genomes of Odontoponera transversa and Camponotus friedae, two ant species with a natural distribution in China, to facilitate future study of ant evolution.
    METHODS: We obtained a total of 16 Gb and 51 Gb PacBio HiFi data for O. transversa and C. friedae, respectively, which were assembled into the draft genomes of 339 Mb for O. transversa and 233 Mb for C. friedae. Genome assessments by multiple metrics showed good completeness and high accuracy of the two assemblies. Gene annotations assisted by RNA-seq data yielded a comparable number of protein-coding genes in the two genomes (10,892 for O. transversa and 11,296 for C. friedae), while repeat annotations revealed a remarkable difference of repeat content between these two ant species (149.4 Mb for O. transversa versus 49.7 Mb for C. friedae). Besides, complete mitochondrial genomes for the two species were assembled and annotated.
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  • 文章类型: Journal Article
    动物及其肠道共生体的进化是一个复杂的现象,被脆弱和多样性所掩盖。在社会有机体中,亲属之间共生体的传播可能会产生具有更稳定关联的系统。这里,我们研究了涉及头孢蚂蚁及其细胞外肠道细菌的社会昆虫共生的历史,主要来自宿主专门的血统。我们对9个细菌顺序的共生体进行多基因座系统发育,并将先前的扩增子序列数据映射到谱系分配的共生体基因组,研究20种宿主物种中严格定义的共生体的分布。基于单生和附加假设检验,我们估计这些专门的肠道细菌属于18个不同的谱系,其中15个已成功分离培养。几个共生体谱系显示了在头孢菌素进化史后期发生的驯化事件的证据,在所有20种宿主物种和48个菌落中,仅普遍检测到一个谱系,并通过扩增子16SrRNA测序进行采样。我们发现了四个共生体中系统发育受限分布的证据,表明历史或遗传对群落组成的影响。两个谱系显示了频繁的谱系内共感染的证据,突出初始驯化后生态位发散的潜力。几乎所有共生体都显示出偶尔发生宿主交换的证据,但是5月4日,更多的时候,与他们的主人共同多样化。通过我们对共生体定位和基因组功能谱的进一步评估,我们展示了具有共同进化史的共生体的独特生态位,对宿主及其肠道微生物组进化的潜在力量提出了进一步的质疑。
    The evolution of animals and their gut symbionts is a complex phenomenon, obscured by lability and diversity. In social organisms, transmission of symbionts among relatives may yield systems with more stable associations. Here, we study the history of a social insect symbiosis involving cephalotine ants and their extracellular gut bacteria, which come predominantly from host-specialized lineages. We perform multi-locus phylogenetics for symbionts from nine bacterial orders, and map prior amplicon sequence data to lineage-assigned symbiont genomes, studying distributions of rigorously defined symbionts across 20 host species. Based on monophyly and additional hypothesis testing, we estimate that these specialized gut bacteria belong to 18 distinct lineages, of which 15 have been successfully isolated and cultured. Several symbiont lineages showed evidence for domestication events that occurred later in cephalotine evolutionary history, and only one lineage was ubiquitously detected in all 20 host species and 48 colonies sampled with amplicon 16S rRNA sequencing. We found evidence for phylogenetically constrained distributions in four symbionts, suggesting historical or genetic impacts on community composition. Two lineages showed evidence for frequent intra-lineage co-infections, highlighting the potential for niche divergence after initial domestication. Nearly all symbionts showed evidence for occasional host switching, but four may, more often, co-diversify with their hosts. Through our further assessment of symbiont localization and genomic functional profiles, we demonstrate distinct niches for symbionts with shared evolutionary histories, prompting further questions on the forces underlying the evolution of hosts and their gut microbiomes.
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  • 文章类型: Journal Article
    在全球范围内,生物多样性在地理上被构造成生物相似性区域。划定这些区域主要针对四足动物和植物,但是那些像昆虫这样的超多样化群体是相对未知的。昆虫与植物的生物地理一致性可能高于四足动物,因为它们与四足动物有着紧密的生态和进化联系,但它仍未测试。这里,我们为一个主要和广泛的昆虫群体制定了全球区域化,蚂蚁,根据迄今为止最全面的分布和系统发育信息,并检查其与四足动物和维管植物的区域化的相似性。我们的蚂蚁区域化支持新提出的马达加斯加和基于四足动物划定的中日领域,它恢复了在植物中观察到的簇,但在四足动物中没有,如北极和印度-太平洋领域。定量比较表明,不同组之间的强烈关联-植物与蚂蚁的一致性高于四足动物。这些结果强调了生命树中各种分布模式的广泛一致性,以及四足类动物无法捕获的昆虫和植物的相似性。我们的分析强调了为昆虫群体开发全球生物地理地图以获得更全面的地球生命地理图景的重要性。
    On a global scale, biodiversity is geographically structured into regions of biotic similarity. Delineating these regions has been mostly targeted for tetrapods and plants, but those for hyperdiverse groups such as insects are relatively unknown. Insects may have higher biogeographic congruence with plants than tetrapods due to their tight ecological and evolutionary links with the former, but it remains untested. Here, we develop a global regionalization for a major and widespread insect group, ants, based on the most comprehensive distributional and phylogenetic information to date, and examine its similarity to regionalizations for tetrapods and vascular plants. Our ant regionalization supports the newly proposed Madagascan and Sino-Japanese realms based on tetrapod delineations, and it recovers clusters observed in plants but not in tetrapods, such as the Holarctic and Indo-Pacific realms. Quantitative comparison suggests strong associations among different groups-plants showed a higher congruence with ants than with tetrapods. These results underscore the wide congruence of diverse distribution patterns across the tree of life and the similarities shared by insects and plants that are not captured by tetrapod groups. Our analysis highlights the importance of developing global biogeographic maps for insect groups to obtain a more comprehensive geographic picture of life on Earth.
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  • 文章类型: Journal Article
    将查询的单个动物或植物分配给其派生种群是与生物谱系相关的各种应用中的首要任务。这样的努力通常依赖于系统发育框架下的短DNA序列。当推断的种群来源是模糊的系统发育结构时,这些方法自然会显示出约束,一种需要更多信息遗传信号的情况。在具有成本效益的全基因组序列生产和人工智能方面的最新进展创造了一个前所未有的机会来追踪基本上任何给定个体的人口起源,只要基因组参考数据是全面和标准化的。这里,我们开发了一种卷积神经网络方法来使用基因组SNP识别种群起源。三个经验数据集(一只亚洲蜜蜂,一只红火蚂蚁,和一个鸡数据集)和两个模拟种群用于概念证明。性能测试表明,该方法能够准确识别查询个体的家谱来源,成功率从>93%到100%不等。我们进一步表明,模型的准确性可以通过FST过滤来改善信息站点来显着提高。我们的方法对于与批次大小和时期相关的配置是稳健的,而模型学习受益于设置适当的预设学习率。此外,我们解释了关键站点对算法可解释性和可信度的重要性评分,这在很大程度上被忽视了。我们预计,通过将基因组学和深度学习相结合,我们的方法将在涉及自然资源的保护和管理应用中看到广泛的潜力,入侵害虫和杂草,和野生动物产品的非法交易。
    Assigning a query individual animal or plant to its derived population is a prime task in diverse applications related to organismal genealogy. Such endeavors have conventionally relied on short DNA sequences under a phylogenetic framework. These methods naturally show constraints when the inferred population sources are ambiguously phylogenetically structured, a scenario demanding substantially more informative genetic signals. Recent advances in cost-effective production of whole-genome sequences and artificial intelligence have created an unprecedented opportunity to trace the population origin for essentially any given individual, as long as the genome reference data are comprehensive and standardized. Here, we developed a convolutional neural network method to identify population origins using genomic SNPs. Three empirical datasets (an Asian honeybee, a red fire ant, and a chicken datasets) and two simulated populations are used for the proof of concepts. The performance tests indicate that our method can accurately identify the genealogy origin of query individuals, with success rates ranging from  93 % to 100 %. We further showed that the accuracy of the model can be significantly increased by refining the informative sites through FST filtering. Our method is robust to configurations related to batch sizes and epochs, whereas model learning benefits from the setting of a proper preset learning rate. Moreover, we explained the importance score of key sites for algorithm interpretability and credibility, which has been largely ignored. We anticipate that by coupling genomics and deep learning, our method will see broad potential in conservation and management applications that involve natural resources, invasive pests and weeds, and illegal trades of wildlife products.
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  • 文章类型: Journal Article
    以其独特的群体结构,蚂蚁之间的竞争(膜翅目:Formicidae)可能特别激烈,在适当的情况下,殖民地可能愿意牺牲大量个人来获得资源或领土。在这次审查中,我们涵盖了蚂蚁竞争升级为战斗的情况,战斗战略和战术,以及这些战斗的分析方法。殖民地选择战斗的趋势可能因物种和情况而异,我们会详细回顾一下。因为他们的团体规模很大,蚂蚁冲突可以遵循与许多其他物种不同的模式,通过各种专业的改编和战斗策略,例如专门的工人阶层和需要迅速招募大量同胞。这些相同的大群体规模也可以使蚂蚁战斗适合数学分析,特别是在兰切斯特的法律的背景下,考虑总数如何影响对抗的结果。然而,动态行为通常会破坏现实场景中理想化的数学预测,即使这些仍然可以阐明这种行为的解释。我们还系统地报道了关于蚂蚁群体之间战斗的文献,提出了其他一些关于具有独特殖民地组织的物种的有趣研究,如军蚁和削叶蚁。
    With their unique colony structure, competition between ants (Hymenoptera: Formicidae) can be particularly intense, with colonies potentially willing to sacrifice large number of individuals to obtain resources or territory under the right circumstances. In this review, we cover circumstances in which ant competition escalates into combat, battle strategies and tactics, and analysis methods for these battles. The trends for when colonies choose to fight can vary greatly dependent on the species and situation, which we review in detail. Because of their large group sizes, ant conflicts can follow different patterns than many other species, with a variety of specialist adaptations and battle strategies, such as specialized worker classes and the need to rapidly recruit large number of compatriots. These same large group sizes also can make ant fighting amenable to mathematical analysis, particularly in the context of Lanchester\'s laws that consider how total numbers influence the outcome of a confrontation. Yet, dynamic behavior can often disrupt idealized mathematical predictions in real-world scenarios, even though these can still shed light on the explanations for such behavior. We also systematically cover the literature on battles between groups of ants, presenting several other interesting studies on species with unique colony organization, such as army ants and leafcutter ants.
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  • 文章类型: Journal Article
    Formica是Formicidae家族中的一个大属,其分布具有很高的多样性,形态学,和生理学。为了更好地理解Formica的进化特征,确定了两种Formica物种的完整线粒体基因组(有丝分裂基因组),并对该属进行了比较有丝分裂基因组分析。两个新测序的Formica有丝分裂基因组每个包括37个典型的线粒体基因和一个大的非编码区(假定的控制区),正如在其他Formica有丝分裂基因组中观察到的那样。基本组成,基因顺序,密码子使用,tRNA二级结构在Formica物种中非常保守,而在控制区观察到序列大小和结构特征的多样性。我们还在基因间间隔区观察到几个保守的基序。这些保守的基因组特征可能与线粒体功能及其高度保守的生理约束有关。而控制区的多样性可能与异质生境之间的适应性进化有关。在每个Formica有丝分裂基因组中,多数链上的AT-偏斜值均为负,表明碱基组成中链不对称性的逆转。在Formica有丝分裂基因组中观察到强烈的密码子使用偏差,主要由核苷酸组成决定。Formica物种的所有13种线粒体蛋白质编码基因均表现出纯化选择的分子特征,如每个蛋白质编码基因的非同义取代与同义取代的比率小于1所示。基于有丝分裂基因组数据的系统发育分析获得了相当一致的系统发育关系,除了两个具有不稳定的系统发育位置的Formica物种,表明有丝分裂基因组数据可用于构建蚂蚁的系统发育。除了表征两个额外的Formica有丝分裂基因组,这项研究还为Formica提供了一些关键的进化见解。
    Formica is a large genus in the family Formicidae with high diversity in its distribution, morphology, and physiology. To better understand evolutionary characteristics of Formica, the complete mitochondrial genomes (mitogenomes) of two Formica species were determined and a comparative mitogenomic analysis for this genus was performed. The two newly sequenced Formica mitogenomes each included 37 typical mitochondrial genes and a large non-coding region (putative control region), as observed in other Formica mitogenomes. Base composition, gene order, codon usage, and tRNA secondary structure were well conserved among Formica species, whereas diversity in sequence size and structural characteristics was observed in control regions. We also observed several conserved motifs in the intergenic spacer regions. These conserved genomic features may be related to mitochondrial function and their highly conserved physiological constraints, while the diversity of the control regions may be associated with adaptive evolution among heterogenous habitats. A negative AT-skew value on the majority chain was presented in each of Formica mitogenomes, indicating a reversal of strand asymmetry in base composition. Strong codon usage bias was observed in Formica mitogenomes, which was predominantly determined by nucleotide composition. All 13 mitochondrial protein-coding genes of Formica species exhibited molecular signatures of purifying selection, as indicated by the ratio of non-synonymous substitutions to synonymous substitutions being less than 1 for each protein-coding gene. Phylogenetic analyses based on mitogenomic data obtained fairly consistent phylogenetic relationships, except for two Formica species that had unstable phylogenetic positions, indicating mitogenomic data are useful for constructing phylogenies of ants. Beyond characterizing two additional Formica mitogenomes, this study also provided some key evolutionary insights into Formica.
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