Adaptation

适应
  • 文章类型: Journal Article
    气候变化对全球农业可持续性构成重大威胁。农业是发展中国家国内生产总值的重要组成部分。气候变化对农业的多方面影响,强调极端天气事件,如缺水,热浪,降雨不稳定,风暴,洪水,新出现的虫害正在破坏农业生产力。农民的社会经济地位特别容易受到极端气候的影响,未来的预测表明环境空气温度会显著升高,而且不可预测,强降雨模式。农业历来依靠大量使用合成肥料,除草剂,和杀虫剂,结合灌溉和生物技术方法的进步,以提高生产力。它包括一系列旨在增强农业系统复原力的实践,提高生产率,减少温室气体排放。通过采用气候智能型做法,农民可以更好地适应不断变化的气候条件,从而确保更可持续和安全的粮食生产。此外,它确定了未来研究的关键领域,重点制定创新的适应和缓解战略。这些战略对于尽量减少气候变化对农业的有害影响和促进粮食系统的长期可持续性至关重要。本文强调了跨学科方法和先进技术整合以应对气候变化带来的挑战的重要性。通过培养对这些问题的更深入的理解,为政策制定者提供信息,研究人员,面对气候变化,保障农业生产力和粮食安全的有效战略。
    Climate change poses a substantial threat to agricultural sustainability globally. Agriculture is a vital component of the gross domestic production of developing countries. The multifaceted impacts of climate change on agriculture, highlighting how extreme weather events such as water stress, heatwaves, erratic rainfall, storms, floods, and emerging pest infestations are disrupting agricultural productivity. The socioeconomic status of farmers is particularly vulnerable to climatic extremes with future projections indicating significant increment in ambient air temperatures and unpredictable, intense rainfall patterns. Agriculture has historically relied on the extensive use of synthetic fertilizers, herbicides, and insecticides, combined with advancements in irrigation and biotechnological approaches to boost productivity. It encompasses a range of practices designed to enhance the resilience of agricultural systems, improve productivity, and reduce greenhouse gas emissions. By adopting climate-smart practices, farmers can better adapt to changing climatic conditions, thereby ensuring more sustainable and secure food production. Furthermore, it identifies key areas for future research, focusing on the development of innovative adaptation and mitigation strategies. These strategies are essential for minimizing the detrimental impacts of climate change on agriculture and for promoting the long-term sustainability of food systems. This article underscores the importance of interdisciplinary approaches and the integration of advanced technologies to address the challenges posed by climate change. By fostering a deeper understanding of these issues to inform policymakers, researchers, and practitioners about effective strategies to safeguard agricultural productivity and food security in the face of changing climate.
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  • 文章类型: Journal Article
    目的:两排造口术是提高光合速率的一种潜在方法;然而,两栖类物种及其驱动因素的气孔密度的纬度梯度仍然未知。
    方法:这里,486个两栖物种-位点组合的正面气孔密度(SDad)和背面气孔密度(SDab),属于32个植物家族,是从中国收集的,并计算了它们的总气孔密度(SDtotal)和气孔比(SR)。
    结果:总体而言,这四个气孔性状没有显示出显著的系统发育信号。木本和草本物种之间的SDab和SDtotal没有显着差异,但木本物种的SDad和SR高于草本物种。此外,观察到SDab和SDad之间存在显著正相关.我们还发现气孔密度(包括SDab,SDad,和SDtotal)随纬度而减少,而SR随纬度而增加,温度季节性是驱动它的最重要的环境因素。此外,进化史(由系统发育和物种代表)解释的气孔性状变异比当今环境多10-22倍(65.2%-71.1%vs.2.9%-6.8%)。
    结论:我们的研究扩展了我们对性状与环境关系的认识,并强调了进化史在驱动气孔性状变异方面的重要性。
    OBJECTIVE: Amphistomy is a potential method for increasing photosynthetic rate; however, the latitudinal gradients of stomatal density across amphistomatous species and their drivers remain unknown.
    METHODS: Here, the adaxial stomatal density (SDad) and abaxial stomatal density (SDab) of 486 amphistomatous species-site combinations, belonging to 32 plant families, were collected from China, and their total stomatal density (SDtotal) and stomatal ratio (SR) were calculated.
    RESULTS: Overall, these four stomatal traits did not show significant phylogenetic signals. There were no significant differences in SDab and SDtotal between woody and herbaceous species, but SDad and SR were higher in woody species than in herbaceous species. Besides, a significantly positive relationship between SDab and SDad was observed. We also found that stomatal density (including SDab, SDad, and SDtotal) decreased with latitude while SR increased with latitude, and temperature seasonality was the most important environmental factor driving it. Besides, evolutionary history (represented by both phylogeny and species) explained about 10-22 fold more of the variation in stomatal traits than the present-day environment (65.2%-71.1% vs. 2.9%-6.8%).
    CONCLUSIONS: Our study extended our knowledge of trait-environment relationships and highlighted the importance of evolutionary history in driving stomatal trait variability.
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  • 文章类型: Journal Article
    在许多脊椎动物物种中,性二态的听力敏感性已经进化,体型较大的性别通常表现出更敏感的听力。然而,推广这种联系是有争议的。对性二态听觉敏感性的研究有助于理解听觉功能,适应,和物种之间的进化。因此,身体大小和听力之间的假设关联需要进一步验证,特别是在特定的动物群体中。在这项研究中,我们通过测量3岁中国软壳龟(Pelodiscussinensis)两种性别的听觉脑干反应(ABR)来评估听力敏感性。在这个物种中,男性的身体比女性的身体大,人们大部分时间都在淡水栖息地底部的泥泞中度过。我们发现对两性来说,听力灵敏度带宽为0.2-0.9kHz.尽管男性明显大于女性,在相同的刺激频率下,男性和女性的ABR阈值或潜伏期没有显著差异.这些结果表明,中华毕赤酵母的听力仅对低频(通常<0.9kHz)声音信号敏感,并且性二态听力敏感性不是中华毕赤酵母中已经进化的特征。生理和环境原因可能是这些底栖海龟通过低频声音信号进行声通信以及缺乏性二态听觉敏感性的原因。这项研究的结果完善了我们对脊椎动物听觉系统的适应和进化的理解。
    Sexually dimorphic hearing sensitivity has evolved in many vertebrate species, and the sex with a larger body size typically shows more sensitive hearing. However, generalizing this association is controversial. Research on sexually dimorphic hearing sensitivity contributes to an understanding of auditory sense functions, adaptations, and evolution among species. Therefore, the hypothesized association between body size and hearing needs further validation, especially in specific animal groups. In this study, we assessed hearing sensitivity by measuring auditory brainstem responses (ABRs) in both sexes of 3-year-old Chinese softshell turtles (Pelodiscus sinensis). In this species, male bodies are larger than those of female, and individuals spend most of their lives in the mud at the bottom of freshwater habitats. We found that for both sexes, the hearing sensitivity bandwidth was 0.2-0.9 kHz. Although males were significantly larger than females, no significant differences in ABR thresholds or latencies were found between males and females at the same stimulus frequency. These results indicate that P. sinensis hearing is only sensitive to low-frequency (typically <0.9 kHz) sound signals and that sexually dimorphic hearing sensitivity is not a trait that has evolved in P. sinensis. Physiological and environmental reasons may account for P. sinensis acoustic communication via low-frequency sound signals and the lack of sexually dimorphic hearing sensitivity in these benthic turtles. The results of this study refine our understanding of the adaptation and evolution of the vertebrate auditory system.
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  • 文章类型: Journal Article
    真菌对脊椎动物的原发性致病性在这里被描述为一种有意的策略,其中宿主在增加物种适应性中起作用。机会主义被定义为使用为在完全不同的栖息地中生活而设计的特性,在宿主组织中单个菌株的偶然存活。在这种情况下,宿主的感染控制主要基于先天免疫,病原体在感染后不传播,因此真菌进化是不可能的。主要病原体包括两种类型,取决于他们的传输方式。环境病原体具有双重生命周期,并倾向于成为植物性动物,适应特定栖息地的首选宿主。相比之下,具有宿主到宿主传播模式的病原体容易转移到邻居,免疫幼稚宿主,有可能导致流行病。除了这些典型的生命周期,一些环境真菌能够在不同的宿主/栖息地之间实现巨大的飞跃,可能是由于在一个完全不同的利基中生存的关键因素的相似性,从而允许从机会性致病性转变为原发性致病性。大多数情况下,这些因素似乎与极端的容忍度有关。
    Fungal primary pathogenicity on vertebrates is here described as a deliberate strategy where the host plays a role in increasing the species fitness. Opportunism is defined as coincidental survival of an individual strain in host tissue using properties that are designed for life in an entirely different habitat. In that case the host\'s infection control is largely based on innate immunity, and the etiologic agent is not transmitted after infection, and thus fungal evolution is not possible. Primary pathogens encompass two types, depending on their mode of transmission. Environmental pathogens have a double life cycle, and tend to become enzootic, adapted to a preferred host in a particular habitat. In contrast, pathogens that have a host-to-host transmission pattern are prone to shift to a neighboring, immunologically naive host, potentially leading to epidemics. Beyond these prototypical life cycles, some environmental fungi are able to make large leaps between dissimilar hosts/habitats, probably due to similarity of key factors enabling survival in an entirely different niche, and thus allowing a change from opportunistic to primary pathogenicity. Mostly, such factors seem to be associated with extremotolerance.
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  • 文章类型: Journal Article
    高海拔肺水肿(HAPE)对于在没有足够适应的情况下迅速上升的旅居者来说是致命的威胁。适应的寄居者和适应的本地人都对HAPE不敏感,但具有不同的生理特征和分子基础。在这项研究中,基于GSE52209,将HAPE患者的基因表达谱与适应的旅居者和适应的本地人进行了比较,确定了共同和不同的差异表达基因(DEG)及其中心基因,分别。功能富集分析的生物信息学方法,免疫浸润,诊断模型构建,进行竞争性内源性RNA(ceRNA)分析和药物预测,以检测潜在的生物学功能和分子机制.接下来,进行了一系列HAPE大鼠模型的体内实验和HUVEC的体外实验,以验证生物信息学分析的结果。在旅居者和本地人之间,DEGs的富集途径和HAPE的免疫景观显着不同,常见的DEGs主要富集在发育和免疫途径上。列线图显示,TNF-α的上调和RPLP0的下调对旅居者和本地人的HAPE均具有很高的诊断效率,在HAPE大鼠模型中进一步验证。TNF-α和RPLP0敲低的添加激活了内皮细胞(ECs)的凋亡信号并增强了内皮通透性。总之,TNF-α和RPLP0是旅居者和本地人在适应/适应/适应不良过程中HAPE易感性的共有生物标志物和分子基础,激发预测和治疗HAPE的新思路。
    High-altitude pulmonary edema (HAPE) is a fatal threat for sojourners who ascend rapidly without sufficient acclimatization. Acclimatized sojourners and adapted natives are both insensitive to HAPE but have different physiological traits and molecular bases. In this study, based on GSE52209, the gene expression profiles of HAPE patients were compared with those of acclimatized sojourners and adapted natives, with the common and divergent differentially expressed genes (DEGs) and their hub genes identified, respectively. Bioinformatic methodologies for functional enrichment analysis, immune infiltration, diagnostic model construction, competing endogenous RNA (ceRNA) analysis and drug prediction were performed to detect potential biological functions and molecular mechanisms. Next, an array of in vivo experiments in a HAPE rat model and in vitro experiments in HUVECs were conducted to verify the results of the bioinformatic analysis. The enriched pathways of DEGs and immune landscapes for HAPE were significantly different between sojourners and natives, and the common DEGs were enriched mainly in the pathways of development and immunity. Nomograms revealed that the upregulation of TNF-α and downregulation of RPLP0 exhibited high diagnostic efficiency for HAPE in both sojourners and natives, which was further validated in the HAPE rat model. The addition of TNF-α and RPLP0 knockdown activated apoptosis signaling in endothelial cells (ECs) and enhanced endothelial permeability. In conclusion, TNF-α and RPLP0 are shared biomarkers and molecular bases for HAPE susceptibility during the acclimatization/adaptation/maladaptation processes in sojourners and natives, inspiring new ideas for predicting and treating HAPE.
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  • 文章类型: Journal Article
    新兴的适应性变异如何相互作用是野生种群进化的重要因素,但是实证研究这种相互作用的机会很少。我们最近记录了夏威夷野外of(Teleogryllusoceanicus)种群中适应性表型“卷曲翼”的出现。卷曲的翅膀抑制男性的歌唱能力,保护它们免受偷听类寄生虫的苍蝇(Ormiaochracea)。令人惊讶的是,卷曲翼与多个种群中类似的保护性沉默“平翼”表型同时发生,两种表型都没有扩散到固定。这两种表型经常共表达,但是由于要么充分降低歌曲振幅来逃避飞行,他们的共同表达不会带来额外的健身益处。已知许多“脱靶”表型变化伴随着平翼,我们发现卷曲的翅膀,也是,在实验室条件下,对男性的求爱能力产生负面影响,并影响女性的质量和存活率。我们通过杂交,基因组和mRNA测序表明,卷曲的表达与单个常染色体的变异有关。在平翼的平行分析中,我们的结果加强了以前的X连锁单基因座遗传的发现.通过将对这些替代表型的遗传结构的见解与模拟和现场观察相结合,我们表明,这两种改编的共存阻碍了两者的修复,尽管有极端的健身益处,由于健身上位。在同一种群中相似的适应性形式的共同出现可能比通常认为的更为普遍,并且可能是抑制有性繁殖生物野生种群适应性进化的重要力量。
    How emerging adaptive variants interact is an important factor in the evolution of wild populations, but the opportunity to empirically study this interaction is rare. We recently documented the emergence of an adaptive phenotype \"curly-wing\" in Hawaiian populations of field crickets (Teleogryllus oceanicus). Curly-wing inhibits males\' ability to sing, protecting them from eavesdropping parasitoid flies (Ormia ochracea). Surprisingly, curly-wing co-occurs with similarly protective silent \"flatwing\" phenotypes in multiple populations, in which neither phenotype has spread to fixation. These two phenotypes are frequently coexpressed, but since either sufficiently reduces song amplitude to evade the fly, their coexpression confers no additional fitness benefit. Numerous \"off-target\" phenotypic changes are known to accompany flatwing, and we find that curly-wing, too, negatively impacts male courtship ability and affects mass and survival of females under lab conditions. We show through crosses and genomic and mRNA sequencing that curly-wing expression is associated with variation on a single autosome. In parallel analyses of flatwing, our results reinforce previous findings of X-linked single-locus inheritance. By combining insights into the genetic architecture of these alternative phenotypes with simulations and field observations, we show that the co-occurrence of these two adaptations impedes either from fixing, despite extreme fitness benefits, due to fitness epistasis. This co-occurrence of similar adaptive forms in the same populations might be more common than is generally considered and could be an important force inhibiting adaptive evolution in wild populations of sexually reproducing organisms.
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  • 文章类型: Journal Article
    证据表明,育儿干预措施是减少照料者对儿童虐待的有效方法。最近的COVID-19大流行改变了全球育儿干预措施的提供,许多干预措施适应危机期间继续提供服务。这项全球系统评价研究了在COVID-19大流行期间,针对儿童虐待及其风险和保护因素的育儿干预措施是如何适应的。我们搜索了2020年至2022年发表的研究,并确定了31项符合条件的研究。关于基本原理的数据,process,可行性,可接受性,根据《循证干预措施适应和修改报告框架》,对适应的影响进行了叙述综合。结果表明,大多数适应都是积极主动的,集中在分娩方法上,主要是数字化。虽然普遍观察到可行性和可接受性,适应计划的影响尚无定论。报告不足,特别是关于理由,保真度,促进者能力建设,利益相关者的参与,和决策过程,已注意到。审查建议加强规划,文档,并使用既定准则报告计划改编,以及过程和影响评估。
    Evidence shows that parenting interventions are an effective method of reducing caregiver-perpetrated child maltreatment. The recent COVID-19 pandemic has changed the provision of parenting interventions worldwide, with many interventions adapting to continue providing services during the crisis. This global systematic review examined how parenting interventions targeting child maltreatment and its risk and protective factors were adapted during the COVID-19 pandemic. We searched for studies published between 2020 and 2022 and identified 31 eligible studies. The data on the rationale, process, feasibility, acceptability, and impacts of adaptations were narratively synthesized in accordance with the Framework for Reporting Adaptations and Modifications to Evidence-Based Interventions. Results showed that most adaptations were proactive and focused on delivery methods, predominantly digitalization. While feasibility and acceptability were generally observed, the impacts of adapted programs were inconclusive. Inadequate reporting, especially regarding rationale, fidelity, facilitator capacity building, stakeholder involvement, and decision-making processes, was noted. The review recommends enhanced planning, documentation, and reporting of program adaptations using established guidelines, as well as process and impact evaluations.
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  • 文章类型: Journal Article
    背景:非本地物种的引入是淡水生态系统中生物多样性丧失的主要驱动因素。红爪小龙虾(Cheraxquadricarinatus)是一种淡水物种,对低氧胁迫具有耐受性,波动的温度,氨浓度高。这些耐寒的生理特征使C.quadricarinatus成为流行的水产养殖物种和潜在的入侵物种,可能对热带和亚热带生态系统产生负面影响。研究C.quadricarinatus的环境耐受性和免疫适应的基因组基础将有助于开发这种潜在入侵物种的管理策略。
    结果:我们通过整合Nanopore和PacBio技术,构建了四型C.quadricarinatus的染色体水平基因组。比较基因组分析表明,转座因子和串联重复序列驱动了十足甲壳类动物的基因组大小进化。9个与免疫相关的基因家族的扩展有助于C.quadricarinatus的抗病性。三个缺氧相关基因(KDM3A,KDM5A,HMOX2)被鉴定为在四甘蓝中进行阳性选择。此外,体内分析显示,上调KDM5A对四甘草的低氧反应至关重要。KDM5A的敲除会损害该物种的缺氧耐受性。
    结论:我们的结果为四尾梭菌的缺氧耐受和免疫适应提供了基因组基础,促进这种潜在入侵物种的管理。此外,在C.quadricarinatus的体内分析表明,KDM5A在动物缺氧反应中的作用是复杂的。
    BACKGROUND: The introduction of non-native species is a primary driver of biodiversity loss in freshwater ecosystems. The redclaw crayfish (Cherax quadricarinatus) is a freshwater species that exhibits tolerance to hypoxic stresses, fluctuating temperatures, high ammonia concentration. These hardy physiological characteristics make C. quadricarinatus a popular aquaculture species and a potential invasive species that can negatively impact tropical and subtropical ecosystems. Investigating the genomic basis of environmental tolerances and immune adaptation in C. quadricarinatus will facilitate the development of management strategies of this potential invasive species.
    RESULTS: We constructed a chromosome-level genome of C. quadricarinatus by integrating Nanopore and PacBio techniques. Comparative genomic analysis suggested that transposable elements and tandem repeats drove genome size evolution in decapod crustaceans. The expansion of nine immune-related gene families contributed to the disease resistance of C. quadricarinatus. Three hypoxia-related genes (KDM3A, KDM5A, HMOX2) were identified as being subjected to positive selection in C. quadricarinatus. Additionally, in vivo analysis revealed that upregulating KDM5A was crucial for hypoxic response in C. quadricarinatus. Knockdown of KDM5A impaired hypoxia tolerance in this species.
    CONCLUSIONS: Our results provide the genomic basis for hypoxic tolerance and immune adaptation in C. quadricarinatus, facilitating the management of this potential invasive species. Additionally, in vivo analysis in C. quadricarinatus suggests that the role of KDM5A in the hypoxic response of animals is complex.
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  • 文章类型: Journal Article
    北方森林频繁缺水对优势树种的影响日益受到重视,特别是应对全球气候变化情景。然而,光强耦合和水分亏缺对落叶松幼苗再生和生长的影响,中国北方森林的优势物种,还不清楚。我们用四种光强度(自然阳光,50%阴影,75%的阴影,和90%的阴影)和三种土壤水分条件(80%,60%,和40%土壤饱和含水量)。结果表明,光水耦合对兴安落叶松幼苗的生长发育有显著影响。在40%的饱和土壤水分含量,净光合速率,蒸腾速率,叶绿素a,在80%的土壤饱和含水量下,总酚叶明显低于相同的光照条件。在60%土壤饱和含水量和50%遮荫处理的耦合处理下,植物高度增量,净光合速率,气孔导度,蒸腾速率,叶绿素a,和酚类化合物含量显著高于其他耦合处理;然而,超过75%的遮光抑制了光合参数,叶绿素a,总黄酮叶,和总黄酮分支。本研究结果对森林经营实践具有重要的启示意义,为落叶松幼苗在光水耦合下的早期生长、促进幼苗的存活和生长提供了科学参考。
    The impact of frequent water deficits on dominant tree species in boreal forests has received increased attention, particularly towards addressing the global climate change scenarios. However, the impacts of coupled light intensity and water deficit in the regeneration and growth of Larix gmelinii seedlings, a dominant species in China\'s boreal forests, are still unclear. We conducted a dual-factor controlled experiment with four light intensities (natural sunlight, 50% shading, 75% shading, and 90% shading) and three soil water conditions (80%, 60%, and 40% soil saturated water content). The results showed that the coupling of light and water has a significant effect on the growth and development of Larix gmelinii seedlings. In 40% of the saturated soil moisture content, net photosynthetic rate, transpiration rate, chlorophyll a, and total phenol-leaf were significantly lower than the same light conditions under 80% soil saturated water content. Under the coupling treatment of 60% soil saturated water content and 50% shading treatment, the plant height increment, net photosynthetic rate, stomatal conductance, transpiration rate, chlorophyll a, and phenolic compound content were significantly higher than those of other coupling treatments; however, more than 75% shading inhibited photosynthetic parameters, chlorophyll a, total flavonoid-leaf, and total flavonoid-branch. Our results have important implications for forest management practices; they provide a scientific reference for the early growth of Larix gmelinii seedlings under the coupling of light and water and promote the survival and growth of seedlings.
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  • 文章类型: Journal Article
    哈氏弧菌是天然海洋生境中的正常菌群,是海洋动物中的重要机会病原体。这种细菌感染海洋动物后可引起一系列病变,其中肌肉坏死和溃疡是最常见的症状。本研究探索了哈维伊氏弧菌从海水环境到寄主鱼类肌肉环境的适应机制。综合转录组分析显示,在适应宿主鱼类肌肉环境的过程中,哈维伊氏弧菌的转录组发生了巨大变化。基于基因本体论(GO)和京都基因和基因组百科全书(KEGG)分析,鞭毛组装,氧化磷酸化,细菌趋化性,两组分系统在哈维伊氏弧菌对宿主鱼肌肉的适应中起着至关重要的作用。生物表型的比较表明,哈维伊弧菌显示鞭毛长度显着增加,游泳,抽搐,趋化性,附着力,和宿主鱼肌肉诱导后的生物膜形成,和它的主要氨基酸,特别是宿主肌肉诱导的细菌趋化,Ala和Arg.可以推测,氨基酸诱导的细菌趋化性增强在哈氏弧菌从海水到宿主鱼肌肉的适应中起着关键作用。
    Vibrio harveyi is a normal flora in natural marine habitats and a significant opportunistic pathogen in marine animals. This bacterium can cause a series of lesions after infecting marine animals, in which muscle necrosis and ulcers are the most common symptoms. This study explored the adaptation mechanisms of V. harveyi from the seawater environment to host fish muscle environment. The comprehensive transcriptome analysis revealed dramatic changes in the transcriptome of V. harveyi during its adaptation to the host fish muscle environment. Based on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, flagellar assembly, oxidative phosphorylation, bacterial chemotaxis, and two-component systems play crucial roles in V. harveyi\'s adaptation to host fish muscle. A comparison of biological phenotypes revealed that V. harveyi displayed a significant increase in flagellar length, swimming, twitching, chemotaxis, adhesion, and biofilm formation after induction by host fish muscle, and its dominant amino acids, especially bacterial chemotaxis induced by host muscle, Ala and Arg. It could be speculated that the enhancement of bacterial chemotaxis induced by amino acids plays a key role in the adaptation of V. harveyi from seawater to the muscle of the host fish.
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