uropathogenic Escherichia coli

尿路致病性大肠杆菌
  • 文章类型: Journal Article
    尿路致病性大肠杆菌是尿路感染(UTI)的主要原因。本研究进行了系统评价和荟萃分析,以确定2012年至2022年伊朗确诊的细菌性UTI儿童中抗生素耐药的尿路致病性大肠杆菌的患病率。
    通过搜索PubMed,Scopus,谷歌学者,WebofScience,MagIran,伊朗科学信息数据库,IranMedex,伊朗信息科学与技术研究所。通过应用随机效应模型计算抗生素特异性合并患病率估计值。采用Freeman-Tukey双反正弦变换。I-平方统计量,计算Cochran的Q检验,并对采样地点的纬度进行元回归。
    文献检索到2159篇,其中包括19篇文章。抗生素耐药性最高的是多西环素,替卡西林-克拉维酸,头孢唑啉,头孢呋辛,和阿莫西林-克拉维酸,59%,57%,54%,53%,52%,分别。纬度上的Meta回归对呋喃妥因有统计学意义(P=0.05)。
    在伊朗儿童中的大多数已确认的细菌性UTI中观察到耐药的泌尿致病性大肠杆菌菌株。治疗尿路病原体最有效的抗生素是粘菌素,美罗培南,还有亚胺培南.
    UNASSIGNED: Uropathogenic Escherichia coli is a major cause of urinary tract infections (UTIs). This systematic review and meta-analysis was conducted to determine the prevalence of antibiotic-resistant uropathogenic E. coli among Iranian children with confirmed bacterial UTIs from 2012 to 2022.
    UNASSIGNED: A systematic review was performed by searching PubMed, Scopus, Google Scholar, Web of Science, MagIran, Iranian Scientific Information Database, IranMedex, and Iranian Research Institute for Information Science and Technology. The antibiotic-specific pooled prevalence estimates were calculated by applying a random-effects model. Freeman-Tukey Double Arcsine transformation was applied. I-squared statistic, and Cochran\'s Q test were computed and meta-regression was conducted on latitude of sampling location.
    UNASSIGNED: The literature search retrieved 2159 articles, among which 19 articles were included. The highest antibiotic resistance was related to doxycycline, ticarcillin-clavulanic acid, cefazolin, cefuroxime, and amoxycillin-clavulanic acid, 59%, 57%, 54%, 53%, and 52%, respectively. Meta-regression on the latitude was statistically significant for nitrofurantoin (P=0.05).
    UNASSIGNED: Resistant uropathogenic Escherichia coli strains were observed in the majority of confirmed bacterial UTIs among Iranian children. The most effective antibiotics for uropathogens were colistin, meropenem, and imipenem.
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  • 文章类型: Journal Article
    尿路感染(UTI)是全世界最常见的细菌感染之一,并且在女性中特别普遍。复发性UTI由于其症状和频繁复发而显著降低生活质量。患者通常在轻微剧烈活动或强烈的心理压力后立即复发。在这次审查中,我们探讨了尽管出现了各种治疗方法,但感染仍持续存在的原因,并针对粘连和感染的机制提出了治疗复发性膀胱炎的策略.维生素D水平和中性粒细胞明胶酶相关脂质运载蛋白的表达与UTI的复发有关。在UTI期间,细菌利用粘附素侵入泌尿道,粘附于尿路上皮细胞,然后穿透这些细胞,它们迅速繁殖以建立细胞内细菌群落。细菌还可以形成静止的细胞内库,逃避免疫反应和抗生素治疗,在某些情况下导致复发。细菌和D-甘露糖的表面蛋白在细菌与尿路上皮的粘附中至关重要。了解这些过程提供了对专注于防止细菌附着和簇形成的潜在治疗方法的有价值的见解。通过破坏细菌粘附并在细胞上形成簇的能力,我们可以更好地管理复发性尿路感染并改善患者预后.
    Urinary tract infections (UTIs) are among the most common bacterial infections worldwide and are particularly prevalent in women. Recurrent UTIs significantly diminish quality of life due to their symptoms and frequent relapses. Patients often experience immediate relapse following slightly strenuous activities or intense psychological stress. In this review, we explore why infections persist despite the advent of various treatments and suggest strategies to manage recurrent cystitis by targeting the mechanisms of adhesion and infection. Vitamin D levels and the expression of neutrophil gelatinase-associated lipocalin are linked to the recurrence of UTIs. During a UTI, bacteria employ adhesins to invade the urinary tract, adhere to urothelial cells, and then penetrate these cells, where they rapidly multiply to establish intracellular bacterial communities. Bacteria can also form quiescent intracellular reservoirs that escape immune responses and antibiotic treatments, leading to recurrence under certain conditions. The surface proteins of bacteria and D-mannose are crucial in the adhesion of bacteria to the urothelium. Understanding these processes provides valuable insights into potential therapeutic approaches that focus on preventing bacterial attachment and cluster formation. By disrupting the ability of bacteria to adhere to and form clusters on cells, we can better manage recurrent UTIs and improve patient outcomes.
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  • 文章类型: Journal Article
    A significant proportion of urinary tract infections (UTIs), typically affecting kidney transplant patients (KTPs), is attributed to the presence of extended-spectrum β-lactamases (ESBLs) and multi-drug resistance (MDR) in Escherichia coli strains. For this reason, the current meta-analysis was conducted to summarize the frequency of ESBL-producing UPEC among KTPs. A systematic search was conducted to identify studies in the Web of Science, PubMed, Embase, and Scopus electronic databases between 2000 and 2021. Finally, 16 articles were selected for data extraction, and meta-analysis was performed using the metaprop command in the STATA (version 11) software. From those studies, the pooled prevalence of ESBL-producing uropathogenic E. coli (UPEC) isolates was 40%. The subcategory analysis results based on continent indicated that Asian countries had the highest rate of ESBL-producing isolates with 45%, followed by 40%, 28%, and 16% in Europe, South America and North America, respectively. Uncomfortably, high level of UPEC isolates in the current investigation was ESBL-producing isolates. These isolates pose a high serious threat to public health because they can contribute to the spread of antimicrobial resistance in the local population and hasten the ineffectiveness of the majority of commonly prescribed antibiotics for the treatment of UTI in KTPs and other patients.
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  • 文章类型: Review
    尿路感染是全球最常见的细菌感染。感染范围可以从轻度,经常性(rUTI)到复杂(cUTI),并且主要由尿路致病性大肠杆菌(UPEC)引起。抗生素治疗对于解决感染很重要;然而,随着抗生素耐药性的持续出现,迫切需要通过更好的管理措施来监测有效抗生素的使用。目前,UTI的临床诊断依赖于实验室测试支持的经验性方法,包括细胞分析(人和细菌细胞),试纸分析和表型培养。因此,小说的发展,敏感和特异性的诊断是合理治疗患者抗生素的重要手段。这篇综述讨论了当前的诊断前景,并重点介绍了正在开发的有前途的新型诊断技术,这些技术可以帮助治疗和管理抗生素抗性UTI。
    Urinary tract infections are the most common bacterial infections worldwide. Infections can range from mild, recurrent (rUTI) to complicated (cUTIs), and are predominantly caused by uropathogenic Escherichia coli (UPEC). Antibiotic therapy is important to tackle infection; however, with the continued emergence of antibiotic resistance there is an urgent need to monitor the use of effective antibiotics through better stewardship measures. Currently, clinical diagnosis of UTIs relies on empiric methods supported by laboratory testing including cellular analysis (of both human and bacterial cells), dipstick analysis and phenotypic culture. Therefore, development of novel, sensitive and specific diagnostics is an important means to rationalise antibiotic therapy in patients. This review discusses the current diagnostic landscape and highlights promising novel diagnostic technologies in development that could aid in treatment and management of antibiotic-resistant UTIs.
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  • 文章类型: Journal Article
    尿路感染是几乎一半的肾移植患者中最常见的感染。这些患者的UTI发展可能会进展为菌血症,急性T细胞介导的排斥反应,同种异体移植功能受损,或同种异体移植物丢失,随着住院和死亡风险的增加。在涉及的各种病原体中,尿致病性大肠杆菌(UPEC),特别是序列类型131(ST131),是最具毒性和多重耐药性的病原体。对大多数β-内酰胺类抗生素的高耐药性,由UPEC产生的超广谱β-内酰胺酶(ESBLs)介导,是肾移植受者UTI临床管理的一个挑战。的确,对β-内酰胺类抗生素的多药耐药性是ESBL产生的直接后果。对其他抗生素如氨基糖苷类的耐药性,氟喹诺酮类药物,甲氧苄啶-磺胺甲恶唑也被报道在产ESBLs的UPEC中,这减少了治疗选择,与医疗保健相关的成本上升,随后导致肾衰竭甚至移植物丢失。在这次审查中,我们旨在讨论UTI的移植后风险因素,UPEC毒力因子(VF),以及包括群体感应在内的相关因素,和抗逆基因。此外,我们搜索了目前的治疗策略和一些可能肯定产生ESBL的UPEC治疗的替代治疗方法.
    Urinary tract infection is the most common infection in almost half of the renal transplant patients. The development of UTI in these patients may progress to bacteremia, acute T cell-mediated rejection, impaired allograft function, or allograft loss, along with the increased risk of hospitalization and death. Among various pathogens implicated, Uropathogenic E. coli (UPEC), especially sequence type 131 (ST131), is the most virulent and multidrug-resistant pathogen. High antimicrobial resistance to most β-lactam antibiotics, mediated by extended spectrum β-lactamases (ESBLs) produced by UPEC, is a challenge in the clinical management of UTIs in kidney transplant recipients. Indeed, multidrug resistance to β-lactam antibiotics is a direct consequence of ESBL production. Resistance to other antibiotics such as aminoglycosides, fluoroquinolones, and trimethoprim-sulphamethoxazole has also been reported in ESBLs-producing UPEC, which reduces the therapeutic options, rising healthcare-associated costs and subsequently leads to renal failure or even graft loss. In this review, we aimed to discuss the post-transplant risk factors of UTI, UPEC virulence factors (VF), and the related factors including quorum sensing, and stress resistance genes. Furthermore, we searched for the current treatment strategies and some of the alternate approaches proposed as therapeutic options that may affirm the treatment of ESBL-producing UPEC.
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  • 文章类型: Meta-Analysis
    背景:尿路感染(UTI)是墨西哥最常见的病理之一,大多数是由尿路致病性大肠杆菌(UPEC)引起的。UPEC具有促进UTI发展并影响诊断和治疗的毒力和抗性决定子。本研究旨在系统回顾已发表的毒力基因的报道,抗生素耐药性,以及墨西哥人群中UPEC临床分离株中普遍存在的系统发育群体。
    方法:按照PRISMA指南进行系统评价和荟萃分析。包括英语和西班牙语的文章。计算每个特征的95%置信区间的总患病率。通过CochranQ检验(Q)评估研究与地理区域之间的异质性,I-square(I2),和H平方(H2)。Egger检验用于出版物和不对称评估中的偏倚风险。
    结果:分析了42篇文章。最流行的毒力基因是ecp(97.25%;n=364)和fimH(82.34%;n=1,422),与较低的UTI相关,其次是papGII(40.98%;n=810),FILC(38.87%;n=319),hlyA(23.55%;n=1,521),负责与上UTI。超过78.13%(n=1,893)的分离株被归类为多药耐药,对墨西哥基本治疗方案中使用的抗生素的耐药性较高。最常报道的超广谱β-内酰胺酶(ESBL)是CTX-M-1(55.61%;n=392),主要的系统系为B2(35.94%;n=1,725)。
    结论:UPEC菌株负责墨西哥的下和上UTI的大部分,它们的多药耐药性大大减少了可用治疗选择的数量。
    Urinary tract infections (UTI) are one of the most common pathologies in Mexico and the majority are caused by uropathogenic Escherichia coli (UPEC). UPEC possesses virulence and resistance determinants that promote UTI development and affect diagnosis and treatment. This study aims to systematically review published reports of virulence genes, antibiotic resistance, and phylogenetic groups prevalent in clinical isolates of UPEC in the Mexican population.
    Systematic review with meta-analysis was performed following PRISMA guidelines. Articles in both English and Spanish were included. Total prevalence with a 95% confidence interval of each characteristic was calculated. Heterogeneity between studies and geographical areas was assessed by the Cochran Q test (Q), I-square (I2), and H-square (H2). Egger\'s test was used for risk of bias in publications and asymmetry evaluations.
    Forty-two articles were analyzed. The most prevalent virulence genes were ecp (97.25%; n = 364) and fimH (82.34%; n = 1,422), which are associated with lower UTI, followed by papGII (40.98%; n = 810), fliC (38.87%; n = 319), hlyA (23.55%; n = 1,521), responsible for with upper UTI. More than 78.13% (n = 1,893) of the isolates were classified as multidrug-resistant, with a higher prevalence of resistance to those antibiotics that are implemented in the basic regimen in Mexico. The most frequently reported Extended Spectrum β-Lactamase (ESBL) was CTX-M-1 (55.61%; n = 392), and the predominant phylogroup was B2 (35.94%; n = 1,725).
    UPEC strains are responsible for a large portion of both lower and upper UTI in Mexico, and their multi-drug resistance drastically reduces the number of therapeutic options available.
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  • 文章类型: Journal Article
    尿路致病性大肠杆菌(UPEC)是尿路感染的最常见病原体之一。在过去的十年里,一些UPEC菌株已经获得抗生素耐药机制,一些已经对所有种类的抗生素产生耐药.UPEC外膜蛋白(OMPs)似乎不仅在膀胱粘膜的侵袭和定植过程中具有决定性作用,而且在耐药机制中,细菌避免被抗菌分子杀死。本系统评价是根据PRISMA指南进行的,旨在表征UPECOMPs并确定其在抗菌药物耐药性中的潜在作用。搜索仅限于过去十年中发表的英语研究。29项研究被纳入修订,在鉴定的76种蛋白质中,7例与抗生素耐药性相关。的确,OmpC与β-内酰胺抗性相关,OmpF与β-内酰胺和氟喹诺酮抗性相关。反过来,TolC,OmpX,YddB,TosA和murein脂蛋白(Lpp)与氟喹诺酮类药物有关,恩诺沙星,novobiocin,β-内酰胺类和球蛋白抗性,分别。在兽医和人类医学中,UPEC对抗菌药物的耐药性的临床意义必须推动新的抗菌药物管理策略的实施。同时也促进了改进的抗菌药物的发展,保护性疫苗以及毒力和抗性因子的特异性抑制剂。
    Uropathogenic Escherichia coli (UPEC) are one of the most common agents of urinary tract infection. In the last decade, several UPEC strains have acquired antibiotic resistance mechanisms and some have become resistant to all classes of antibiotics. UPEC outer membrane proteins (OMPs) seem to have a decisive role not only in the processes of invasion and colonization of the bladder mucosa, but also in mechanisms of drug resistance, by which bacteria avoid killing by antimicrobial molecules. This systematic review was performed according to the PRISMA guidelines, aiming to characterize UPEC OMPs and identify their potential role in antimicrobial resistance. The search was limited to studies in English published during the last decade. Twenty-nine studies were included for revision and, among the 76 proteins identified, seven were associated with antibiotic resistance. Indeed, OmpC was associated with β-lactams resistance and OmpF with β-lactams and fluoroquinolone resistance. In turn, TolC, OmpX, YddB, TosA and murein lipoprotein (Lpp) were associated with fluoroquinolones, enrofloxacin, novobiocin, β-lactams and globomycin resistances, respectively. The clinical implications of UPEC resistance to antimicrobial agents in both veterinary and human medicine must propel the implementation of new strategies of administration of antimicrobial agents, while also promoting the development of improved antimicrobials, protective vaccines and specific inhibitors of virulence and resistance factors.
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  • 文章类型: Journal Article
    尿路感染(UTI)是全世界最普遍的细菌性疾病之一。尽管针对UTI的抗生素有效,患者的复发率仍然很高.此外,抗生素耐药性的发展是一个主要问题,并产生了对替代治疗方案的需求。D-甘露糖,一种天然存在于水果中的单糖,通常作为降低UTI风险的膳食补充剂销售。研究表明,补充D-甘露糖可能是一种有希望的替代或补充疗法,尤其是作为复发性UTI的预防。当在尿液中排泄时,D-甘露糖可能抑制大肠杆菌,UTI的主要致病生物,附着于尿路上皮并引起感染。在这次审查中,我们提供了UTI的概述,大肠杆菌发病机制和D-甘露糖,概述了D-甘露糖降低UTI及其复发风险的现有临床证据。此外,我们讨论了D-甘露糖对尿毒症大肠杆菌的潜在作用机制。
    Urinary tract infections (UTIs) are one of the most prevalent bacterial diseases worldwide. Despite the efficacy of antibiotics targeted against UTI, the recurrence rates remain significant among the patients. Furthermore, the development of antibiotic resistance is a major concern and creates a demand for alternative treatment options. D-mannose, a monosaccharide naturally found in fruits, is commonly marketed as a dietary supplement for reducing the risk for UTIs. Research suggests that supplemented D-mannose could be a promising alternative or complementary remedy especially as a prophylaxis for recurrent UTIs. When excreted in urine, D-mannose potentially inhibits Escherichia coli, the main causative organism of UTIs, from attaching to urothelium and causing infection. In this review, we provide an overview of UTIs, E. coli pathogenesis and D-mannose and outline the existing clinical evidence of D-mannose in reducing the risk of UTI and its recurrence. Furthermore, we discuss the potential effect mechanisms of D-mannose against uropathogenic E.coli.
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  • 文章类型: Journal Article
    大肠杆菌分离株的系统发育分类不仅对于了解大肠杆菌的种群,而且对于阐明菌株与疾病之间的关系非常重要。本研究旨在评估系统发育群体的患病率,抗生素敏感性模式,通过系统评价和荟萃分析,从伊朗不同地区分离出的尿路致病性大肠杆菌(UPEC)中的毒力基因。几个国际电子来源,包括WebofScience,PubMed,Scopus,和Embase,进行了搜索(2000-2020),以确定符合我们纳入标准的研究。使用STATA(版本11)软件中的metaprop程序进行荟萃分析。根据我们的全面搜索,28项符合资格标准的研究被纳入荟萃分析。系统组B2,D,B1,A为39%,26%,18%,8%,分别。此外,不同系统组之间存在显著的异质性。然而,根据Begg和Egger的测试结果,在B2、D、B1和A。这项研究提供了对伊朗分离的UPEC系统群的首次全面研究。我们的发现表明,在伊朗各个地区的UPEC分离株中,系统发育组B2和D组是最主要的系统发育组。此外,我们观察到某些系统发育组比其他组对抗生素的耐药性更强。还观察到,应通过综合感染控制措施来控制毒株B2和D的传播。此外,应制定某些策略来监测抗生素治疗.
    The phylogenetic classification of Escherichia coli isolates is of great importance not only for understanding the populations of E. coli but also for clarifying the relationship between strains and diseases. The present study aimed to evaluate the prevalence of phylogenetic groups, antibiotic susceptibility pattern, and virulence genes among uropathogenic E. coli (UPEC) isolated from different parts of Iran through a systematic review and meta-analysis. Several international electronic sources, including Web of Science, PubMed, Scopus, and Embase, were searched (2000-2020) in order to identify the studies compatible with our inclusion criteria. The meta-analysis was performed using the metaprop program in the STATA (version 11) software. Based on our comprehensive search, 28 studies meeting the eligibility criteria were included in the meta-analysis. The pooled prevalence of phylogroups B2, D, B1, and A was 39%, 26%, 18%, and 8%, respectively. In addition, there was a significant heterogeneity among different phylogroups. However, according to the results of Begg\'s and Egger\'s tests, there were no significant publication bias in phylogroups B2, D, B1, and A. This research provided the first comprehensive study on phylogroups of UPEC isolated in Iran. Our findings indicated that phylogroup B2 and group D were the most predominant phylogenetic groups among UPEC isolates in various regions of Iran. In addition, we observed that certain phylogenetic groups are more antibiotic resistant than the others. It was also observed that the dissemination of virulent phylogroup B2 and D should be controlled via comprehensive infection control measures. Additionally, certain strategies should be developed for monitoring the antibiotic therapy.
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  • 文章类型: Journal Article
    大肠杆菌占社区获得性尿路感染(UTI)的近80%和医院获得性尿路感染(UTI)的50%。这项研究旨在评估从全球UTI患者中分离出的泌尿致病性大肠杆菌(UPEC)中生物膜生产者和非生物膜生产者与抗生素耐药性之间的相关性。搜索是在2000年1月1日至2021年10月30日之间在各种数据库中进行的(PubMed,Scopus,WebofSciences,和谷歌学者)有合适的MeSH术语,和文字。然后,在对选择的研究应用适当的纳入和排除标准后,数据采用CMA软件进行分析。37项研究符合纳入的资格标准。据报道,ESBL和MDR分离株的合并患病率为37.9%,和65.8%,分别。在全世界,生物膜形成在13.3%和99%之间变化。共有74.4%的分离株是生物膜生产者,其中28.6%,35.2%,38.6%表现强劲,中度,和弱生物film。对阿莫西林和美罗培南的耐药率最高和最低,为80.8%。13%,分别。17项研究中有14项(82.35%)报告了生物膜与抗生素耐药性之间的正相关。研究结果表明,大量的分离株能够形成生物膜,这是抗生素耐药性的因素之一,这已被包括的研究报道的生物膜形成与抗生素抗性之间的显著正相关所证实。因此,由于生物膜在UPEC引起的UTI的病因中的重要性,应该防止;因此,可以减少和控制细菌的耐药性。
    Escherichia coli accounts for nearly 80% of community-acquired and 50% of hospital-acquired urinary tract infections (UTI). This study aimed to evaluate the correlation between biofilm producers and Non-biofilm producers with antibiotic resistance in Uropathogenic Escherichia coli (UPEC) isolated from patients with UTI globally. The search was conducted between 1st 2000 to 30th October 2021 in various databases (PubMed, Scopus, Web of sciences, and Google Scholar) with suitable MeSH terms, and text words. Then, after applying the appropriate inclusion and exclusion criteria on the studies for their selection, the data were analyzed by CMA software. Thirty-seven studies met the eligibility criteria to include. The pooled prevalence of ESBL and MDR isolates were reported 37.9%, and 65.8%, respectively. Biofilm formation varied between 13.3% and 99% all over the world. A total of 74.4% of all isolates were biofilm producers, out of which 28.6%, 35.2%, and 38.6% showed strong, moderate, and weak biofilm. The highest and lowest resistance was against Amoxicillin and Meropenem with the prevalence of 80.8%, and 13%, respectively. Fourteen out of 17(82.35%) studies reported a positive correlation between biofilm and antibiotic resistance. Findings showed high numbers of isolates were able to form biofilm, which is one of the factors of antibiotic resistance, and this has been confirmed by the positive significant correlation between biofilm formation and antibiotic resistance that has been reported by studies included. Therefore, due to the importance of biofilm in the etiology of UTI caused by UPEC, it should be prevented; consequently, bacterial resistance can be reduced and controlled.
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